Citrus Sinensis ID: 027007

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Secondary Structure (PSIPRED)
cEEEEEccccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEEccccHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHccccEEccccccccccHHHHHHHHHHHHHHHcccEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEEEccHHHHHHHHHHHHHHcccEEEEEEcccccHHcccccccEEEEEEcccccHHHHHHHccccEEEEEEcccccccccHHHHcccccHHHHHHHHHHHHcccEEEEEEEEccHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHcccccccccEEEHHHHHHHHHHHHHccccccEEEEcccc
Coil and Loop (DISEMBL)
mkilvsgasgylgGRLCHALLKQGHSVRALVRrtsdisglpsegaleLVYGDVTDYRSLVDACFGCHVIFHTaalvepwlpdpsrffAVNVEGLKNVVQAAKETKTVEKIIYTSSffalgstdgyiadenqVHEEKYFCTQYERSKAVADKIALQAAseglpivpvypgviygpgklttgnLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQagldfafpfg
Flexible Loop (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRtsdisglpsegALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Low Complexity Region (SEG)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Disordered region (IsUnstruct)
***LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAF***
Disordered Region (DISOPRED)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Disordered Region (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Disordered Region (DISPRO)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAF***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDFAFPFG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
P73212	343	Putative dihydroflavonol-	N/A	no	0.720	0.481	0.36	6e-19
O53454	370	3 beta-hydroxysteroid deh	yes	no	0.751	0.464	0.335	9e-16
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.921	0.596	0.288	2e-13
Q9SEV0	340	Anthocyanidin reductase O	no	no	0.751	0.505	0.305	2e-12
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.737	0.461	0.281	4e-12
O46516	373	3 beta-hydroxysteroid deh	yes	no	0.746	0.458	0.323	1e-11
P51102	382	Dihydroflavonol-4-reducta	no	no	0.751	0.450	0.285	2e-11
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.493	0.310	0.347	2e-11
P14721	446	Dihydroflavonol-4-reducta	N/A	no	0.742	0.381	0.282	3e-11
Q9EQC1	369	3 beta-hydroxysteroid deh	yes	no	0.724	0.449	0.322	3e-11

>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1

 Score = 94.4 bits (233), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 92/175 (52%), Gaps = 10/175 (5%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISGLPSEGALELVYGDVTDYRSLV 60
            V+G +G++G  L   LL+QG+ VRALVR   R  ++  LP    ++ V GD+ D   L 
Sbjct: 14  FVTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNLQNLP----IDWVVGDLND-GDLH 68

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               GC  +FH AA    W  D    +  NV G +N++  A++   +E+ +YTSS  A+G
Sbjct: 69  QQMQGCQGLFHVAAHYSLWQKDREALYRSNVLGTRNILACAQKAG-IERTVYTSSVAAIG 127

Query: 121 -STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP 174
              DG  ADE+     +     Y++SK  A++ AL AA +G  IV V P    GP
Sbjct: 128 VKGDGQRADESYQSPVEKLIGAYKQSKYWAEQEALTAAQQGQDIVIVNPSTPIGP 182

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 13/185 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct: 16  RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query: 62  ACFGCHVIFHTAALVE----PWLPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct: 73  AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query: 116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
               +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct: 132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query: 174 PGKLT 178
            G  T
Sbjct: 191 NGDQT 195

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively.

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 39/250 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLP-SEGALELVYGDVTD 55
           ++V+GASG++G  L   LL+ G++VRA VR      +T  +  LP ++  L +   D+++
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      VEG+ ++++A KE  TV++I++TS
Sbjct: 68  DGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTS 127

Query: 115 SFFALG---------STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIV 164
           S  ++            D + +D +     K     Y  SKA+A+K A++ ASE GL  +
Sbjct: 128 SAGSVNIEERPRPAYDQDNW-SDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFI 186

Query: 165 PVYPGVIYGPG-------------KLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT 211
            + P ++ GP               L TGN       K+V LV        +   C  +T
Sbjct: 187 SIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLV-------HLDDLCDAMT 239

Query: 212 WLLSSLEQAG 221
           +L    E  G
Sbjct: 240 FLFEHPEANG 249

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 18/190 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
           K  V G +G L   L   LL+ G+ V   VR      + + +  L   G L++   D+TD
Sbjct: 12  KACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTD 71

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   +  GC  IFH A  +     DP +      ++G+ NV+++  ++K+V+++IYTS
Sbjct: 72  EDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTS 131

Query: 115 SFFALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPI 163
           S  A+     S  G + +E        + EEK F   Y  SK +A+K A + A E  + +
Sbjct: 132 SAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINL 191

Query: 164 VPVYPGVIYG 173
           V V P +I G
Sbjct: 192 VTVIPALIAG 201

Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score = 71.6 bits (174), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 23/192 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G+ V A VR   D+        LP ++  L+L   D+T 
Sbjct: 9   VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQ 68

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GCH +FH A  ++    DP +      +EG+ +++++  + KTV+K+++TS
Sbjct: 69  EGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTS 128

Query: 115 SFFALGSTDG-----YIADENQ------VHEEKYFCTQYERSKAVADKIALQAAS-EGLP 162
           S    G+ +G     ++ DE+       ++ +K     Y  SK +A+K A  A     + 
Sbjct: 129 S---AGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNIS 185

Query: 163 IVPVYPGVIYGP 174
            + + P ++ GP
Sbjct: 186 FISIIPTLVVGP 197

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|O46516|3BHS_HORSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Equus caballus GN=HSD3B PE=2 SV=3

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 24/195 (12%)

Query: 4   LVSGASGYLGGRLCHALL--KQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDY 56
           LV+GA G+LG R+   L+  K+   +RAL +        + S L S+  L ++ GD+ D 
Sbjct: 7   LVTGAGGFLGQRIVRLLVEEKEVQEIRALDKVFRPELREEFSKLQSKVKLTVLEGDILDE 66

Query: 57  RSLVDACFGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           + L  AC G   + HTA++++   L +P     VNVEG + +++A  +  +V   IYTSS
Sbjct: 67  QFLKRACQGASAVIHTASIIDVTNLFNPQVTMNVNVEGTQLLLEACSQA-SVPIFIYTSS 125

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASEGLPI-------- 163
             A+   + Y       HEE +  T+    Y  SK +A+K  L  A+ GLP+        
Sbjct: 126 -VAVAGPNSYREIIQNGHEEAHLETKWSSPYPYSKKLAEKAVL--AANGLPLKNGGTLYT 182

Query: 164 VPVYPGVIYGPGKLT 178
             + P  IYG G  T
Sbjct: 183 CALRPMFIYGEGSPT 197

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidative conversion of Delta(5)-ene-3-beta-hydroxy steroid, and the oxidative conversion of ketosteroids. The 3-beta-HSD enzymatic system plays a crucial role in the biosynthesis of all classes of hormonal steroids.

Equus caballus (taxid: 9796)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 17/189 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVY-GDVTD 55
           + V+GASG++G  L   LL++G+ VRA VR   ++        LP+   L  ++  D+++
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  DA  GC  +FH A  ++    DP +      V G+  +++A  + KTV + ++TS
Sbjct: 68  EGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTS 127

Query: 115 SFFALGSTD--GYIADENQVHEEKYFCTQ------YERSKAVADKIALQAASE-GLPIVP 165
           S   +   +    + DEN   + ++  ++      Y  SK +A+K A   A E GL  + 
Sbjct: 128 SAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFIS 187

Query: 166 VYPGVIYGP 174
           + P ++ GP
Sbjct: 188 IIPTLVVGP 196

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 8/121 (6%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G+ VRA VR   D+        LP +E  L L   D+T 
Sbjct: 9   VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQ 68

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GCH +FH A  ++    DP +      +EG+ +++++  + KTV+K++YTS
Sbjct: 69  EGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTS 128

Query: 115 S 115
           S
Sbjct: 129 S 129

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 21/191 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G++VRA VR   ++        LP ++  L L   D+T 
Sbjct: 20  VCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTV 79

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  +E    DP +      ++G+ N++++  + KTV+K I+T+
Sbjct: 80  EGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTT 139

Query: 115 SFFALG----------STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
           S   +            TD   +D + ++ +K     Y  SK +A+K  ++AA E  +  
Sbjct: 140 SGGTVNVEEHQKPVYDETDS--SDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDF 197

Query: 164 VPVYPGVIYGP 174
           + + P ++ GP
Sbjct: 198 ISIIPPLVVGP 208

Antirrhinum majus (taxid: 4151)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9EQC1|3BHS7_MOUSE 3 beta-hydroxysteroid dehydrogenase type 7 OS=Mus musculus GN=Hsd3b7 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 26/192 (13%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALEL--VYGDVTDYRS 58
           LV+G  G+LG  +   LL++   +R L      +S    E   G +++  + GDVT    
Sbjct: 13  LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKAGPVQVTAIQGDVTQAHE 72

Query: 59  LVDACFGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +  A  G HV+ HTA LV+ +    P     VNV+G +NV+ A  +T T + ++YTSS  
Sbjct: 73  VAAAMSGSHVVIHTAGLVDVFGKASPKTIHKVNVQGTQNVIDACVQTGT-QYLVYTSSME 131

Query: 118 ALGST----DGYIADENQ----VHEEKYFCTQYERSKAVADKIALQAASE----GLPIV- 164
            +G        Y  +E+     VH   Y C     SKA+A+++ L+A       GLP+V 
Sbjct: 132 VVGPNIKGHPFYRGNEDTPYEAVHSHPYPC-----SKALAEQLVLEANGRKVNGGLPLVT 186

Query: 165 -PVYPGVIYGPG 175
             + P  IYG G
Sbjct: 187 CALRPTGIYGEG 198

The 3-beta-HSD enzymatic system plays a crucial role in the biosynthesis of all classes of hormonal steroids. HSD VII is active against four 7-alpha-hydroxylated sterols. Does not metabolize several different C(19/21) steroids as substrates. Involved in bile acid synthesis.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
255538356	334	dihydroflavonal-4-reductase, putative [R	0.812	0.556	0.784	6e-84
297798600	343	predicted protein [Arabidopsis lyrata su	0.803	0.536	0.784	4e-82
224067274	337	predicted protein [Populus trichocarpa]	0.812	0.551	0.793	4e-82
186515880	305	Rossmann-fold NAD(P)-binding domain-cont	0.829	0.622	0.729	1e-80
15234163	344	Rossmann-fold NAD(P)-binding domain-cont	0.803	0.534	0.752	2e-80
21450875	338	unknown protein [Arabidopsis thaliana]	0.803	0.544	0.752	2e-80
334187127	327	Rossmann-fold NAD(P)-binding domain-cont	0.829	0.581	0.729	3e-80
225458585	339	PREDICTED: putative dihydroflavonol-4-re	0.812	0.548	0.753	5e-80
147866715	339	hypothetical protein VITISV_023179 [Viti	0.812	0.548	0.753	5e-80
449447239	323	PREDICTED: putative dihydroflavonol-4-re	0.812	0.575	0.759	6e-80

>gi|255538356|ref|XP_002510243.1| dihydroflavonal-4-reductase, putative [Ricinus communis] gi|223550944|gb|EEF52430.1| dihydroflavonal-4-reductase, putative [Ricinus communis]

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 173/186 (93%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK++V+GASGYLGGRLCHAL+++GHS+RALVRRTSD+S LP+  +LEL YGD+TDYRSL+
Sbjct: 1   MKVVVTGASGYLGGRLCHALIEEGHSIRALVRRTSDLSALPTADSLELAYGDITDYRSLL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GCHVIFHTAALVEPWLPDPS+FF+VNV GLKNV++AA+ETKT+EKIIYTSSFFALG
Sbjct: 61  AAFSGCHVIFHTAALVEPWLPDPSKFFSVNVGGLKNVLEAARETKTIEKIIYTSSFFALG 120

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
            TDG++ADE+QVH EK FCT+YERSKA ADKIALQAA++G+PIV VYPGVIYGPGKLTTG
Sbjct: 121 PTDGFVADESQVHPEKVFCTEYERSKATADKIALQAAADGVPIVMVYPGVIYGPGKLTTG 180

Query: 181 NLVAKL 186
           N+VA+L
Sbjct: 181 NVVAQL 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798600|ref|XP_002867184.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313020|gb|EFH43443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 168/186 (90%), Gaps = 2/186 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCHALL++GHSVRALVRRTSDIS LP E  +EL YGDVTDYRSL 
Sbjct: 12  MKILVTGSTGYLGARLCHALLRRGHSVRALVRRTSDISDLPPE--VELAYGDVTDYRSLT 69

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 70  DACSGCDIVFHAAALVEPWLPDPSRFVSVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 129

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+E+QVH E++FCT+YERSKA ADKIAL AASEG+PI+ +YPGVIYGPGKLTTG
Sbjct: 130 STDGSVANEDQVHSERFFCTEYERSKATADKIALNAASEGVPIILLYPGVIYGPGKLTTG 189

Query: 181 NLVAKL 186
           N+VAKL
Sbjct: 190 NMVAKL 195

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067274|ref|XP_002302442.1| predicted protein [Populus trichocarpa] gi|222844168|gb|EEE81715.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/189 (79%), Positives = 169/189 (89%), Gaps = 3/189 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYR 57
           MK LV+GASGYLGGRLCH LLKQGHSVRALVRRTSDIS LP   S G  EL YGD+TDY+
Sbjct: 1   MKALVTGASGYLGGRLCHGLLKQGHSVRALVRRTSDISELPPPSSGGVFELAYGDITDYQ 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           SL+DA  GC VIFH AA+VEPWLPDPS+FF+VNVEGL NV+QAAKET+T+EKIIYTSSFF
Sbjct: 61  SLLDAFSGCQVIFHAAAIVEPWLPDPSKFFSVNVEGLNNVLQAAKETETIEKIIYTSSFF 120

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
           ALGSTDGY+ADE+QVH EK FCT+YERSK +ADKIA QAA+EG+PIV +YPGVIYGPGKL
Sbjct: 121 ALGSTDGYVADESQVHCEKRFCTEYERSKMIADKIASQAAAEGVPIVMLYPGVIYGPGKL 180

Query: 178 TTGNLVAKL 186
           TTGN+VA+L
Sbjct: 181 TTGNIVAQL 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186515880|ref|NP_001119109.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332660814|gb|AEE86214.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 140/192 (72%), Positives = 170/192 (88%), Gaps = 2/192 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 13  MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 71  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query: 181 NLVAKLQWKKVD 192
           N+VA++  ++ +
Sbjct: 191 NMVARMLIERFN 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234163|ref|NP_195062.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|13926213|gb|AAK49584.1|AF370578_1 putative protein [Arabidopsis thaliana] gi|4490303|emb|CAB38794.1| putative protein [Arabidopsis thaliana] gi|7270284|emb|CAB80053.1| putative protein [Arabidopsis thaliana] gi|26983846|gb|AAN86175.1| unknown protein [Arabidopsis thaliana] gi|332660813|gb|AEE86213.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/186 (75%), Positives = 167/186 (89%), Gaps = 2/186 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 13  MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 71  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query: 181 NLVAKL 186
           N+VA++
Sbjct: 191 NMVARM 196

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21450875|gb|AAK59445.2| unknown protein [Arabidopsis thaliana]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/186 (75%), Positives = 167/186 (89%), Gaps = 2/186 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 7   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 64

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 65  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 124

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 125 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 184

Query: 181 NLVAKL 186
           N+VA++
Sbjct: 185 NMVARM 190

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187127|ref|NP_001190902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332660815|gb|AEE86215.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 140/192 (72%), Positives = 170/192 (88%), Gaps = 2/192 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 1   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 59  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 118

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 119 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 178

Query: 181 NLVAKLQWKKVD 192
           N+VA++  ++ +
Sbjct: 179 NMVARMLIERFN 190

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458585|ref|XP_002284636.1| PREDICTED: putative dihydroflavonol-4-reductase [Vitis vinifera] gi|302142332|emb|CBI19535.3| unnamed protein product [Vitis vinifera]

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 144/191 (75%), Positives = 167/191 (87%), Gaps = 5/191 (2%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKL 186
           K+T GN+VA++
Sbjct: 181 KVTAGNIVARM 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866715|emb|CAN78410.1| hypothetical protein VITISV_023179 [Vitis vinifera]

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 144/191 (75%), Positives = 167/191 (87%), Gaps = 5/191 (2%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKL 186
           K+T GN+VA++
Sbjct: 181 KVTAGNIVARM 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447239|ref|XP_004141376.1| PREDICTED: putative dihydroflavonol-4-reductase-like [Cucumis sativus]

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 169/187 (90%), Gaps = 1/187 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL 59
           MKILV+GASGYLGGRLC ALL +G SVRALVR TSD+S LP +  ALELV+GD+TDY+SL
Sbjct: 1   MKILVTGASGYLGGRLCRALLNRGFSVRALVRPTSDLSSLPHDPSALELVHGDITDYQSL 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           ++AC GCHV+FH AA+VEPWLPDPS+F +VNV GL+NV+QA +ETKT+EKIIYTSSFFAL
Sbjct: 61  LEACSGCHVVFHAAAMVEPWLPDPSKFISVNVRGLQNVLQAVRETKTIEKIIYTSSFFAL 120

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
           GSTDGY+A E+QVH EK+FCT+YE+SKA ADKIALQAASEG+PIVPVYPGVIYG GK+T 
Sbjct: 121 GSTDGYVAVESQVHHEKFFCTEYEKSKATADKIALQAASEGIPIVPVYPGVIYGVGKVTA 180

Query: 180 GNLVAKL 186
           GN+VA++
Sbjct: 181 GNVVARM 187

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
TAIR|locus:2119161	344	FLDH "farnesol dehydrogenase"	0.803	0.534	0.752	3.5e-75
UNIPROTKB|Q60A54	328	MCA1017 "Nucleoside diphosphat	0.746	0.521	0.394	4.2e-24
UNIPROTKB|Q74FC2	328	hpnA "NAD-dependent nucleoside	0.847	0.591	0.325	2.4e-21
TIGR_CMR|GSU_0687	328	GSU_0687 "dihydroflavonol 4-re	0.847	0.591	0.325	2.4e-21
UNIPROTKB|P96816	340	Rv0139 "Dihydroflavonol-4-redu	0.720	0.485	0.348	7.2e-20
4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]" target="_blank" href="http://amigo.geneontology.org/cgi-bin/amigo/gp-assoc.cgi?gp=UniProtKB:O53454&session_id=426amigo1369103690">UNIPROTKB|O53454	370	MT1137 "3 beta-hydroxysteroid	0.751	0.464	0.335	9.5e-19
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.733	0.518	0.354	6.3e-17
TIGR_CMR|GSU_1975	336	GSU_1975 "NAD-dependent epimer	0.733	0.5	0.353	1.4e-16
WB|WBGene00017429	343	F13D11.4 [Caenorhabditis elega	0.764	0.510	0.324	1.3e-15
ZFIN|ZDB-GENE-030131-5673	368	hsd3b7 "hydroxy-delta-5-steroi	0.663	0.413	0.296	2.9e-15

TAIR|locus:2119161 FLDH "farnesol dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 140/186 (75%), Positives = 167/186 (89%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct:    13 MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct:    71 DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query:   121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
             STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct:   131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query:   181 NLVAKL 186
             N+VA++
Sbjct:   191 NMVARM 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006721 "terpenoid metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0016487 "farnesol metabolic process" evidence=IDA

GO:0047886 "farnesol dehydrogenase activity" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB|Q60A54 MCA1017 "Nucleoside diphosphate sugar epimerase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 69/175 (39%), Positives = 99/175 (56%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSL 59
             M  LV+GA+G+LG  L  ALL +G  VRA +RR SD++ L  +G A+E  YGD+ D RS+
Sbjct:     1 MTTLVTGATGHLGANLVRALLARGEKVRAFIRRQSDVAAL--DGLAVERAYGDLRDRRSI 58

Query:    60 VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              DA  G   ++HTAA V     D    F VNV G + ++Q A+    V ++++TSSF A+
Sbjct:    59 RDALEGVERLYHTAAFVSIRDGDRQELFDVNVVGTRMLMQEARRAG-VRRVVHTSSFGAV 117

Query:   120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP 174
             G      ++E+         T YER+KAV++   +  A  GL +  V P  I GP
Sbjct:   118 GINPQGASNEHWTVSPFEPGTDYERTKAVSEHDVILEAVRGLDVTIVNPAAIVGP 172

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74FC2 hpnA "NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 65/200 (32%), Positives = 103/200 (51%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--KL 177
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP   K 
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   178 T-TGNLVAKLQWKKVDLVKD 196
             T TG ++     +K+    D
Sbjct:   179 TPTGKIIVDFLNRKMPAYLD 198

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

TIGR_CMR|GSU_0687 GSU_0687 "dihydroflavonol 4-reductase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 65/200 (32%), Positives = 103/200 (51%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--KL 177
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP   K 
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   178 T-TGNLVAKLQWKKVDLVKD 196
             T TG ++     +K+    D
Sbjct:   179 TPTGKIIVDFLNRKMPAYLD 198

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

UNIPROTKB|P96816 Rv0139 "Dihydroflavonol-4-reductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 63/181 (34%), Positives = 95/181 (52%)

Query:     4 LVSGASGYLGGRLCHALLK----QGHSVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
             LV GA+G+LG  +   L+     Q   VRA+VR    T  I  LP    L   +GDV D 
Sbjct:     6 LVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLP----LTRFHGDVFDT 61

Query:    57 RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              ++ +A  GC  +++       WL DPS  F  NV GL+NV+  A +  ++ + ++TSS+
Sbjct:    62 ATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDA-SLRRFVFTSSY 120

Query:   117 FALGSTDGYIA-DENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
               +G   G++A +E++V   K   T Y RS+  A+ + LQ A + GLP V +     YG 
Sbjct:   121 ATVGRRRGHVATEEDRVDTRKV--TPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGG 178

Query:   175 G 175
             G
Sbjct:   179 G 179

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|O53454 MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 210 (79.0 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
 Identities = 62/185 (33%), Positives = 96/185 (51%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
             ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct:    16 RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query:    62 ACFGCHVIFHTAALVEPW----LPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct:    73 AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query:   116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
                 +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct:   132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query:   174 PGKLT 178
              G  T
Sbjct:   191 NGDQT 195

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA

GO:0004769 "steroid delta-isomerase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0030283 "testosterone dehydrogenase [NAD(P)

GO:0070403 "NAD+ binding" evidence=IDA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 68/192 (35%), Positives = 103/192 (53%)

Query:     3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGA---LELVYGDV 53
             + V+GASG +G  L H LL +G+SV A V+   D      + GL  EGA   L L   D+
Sbjct:     9 VCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGL--EGAATRLHLFEMDL 66

Query:    54 TDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKI 110
               Y ++  A  GC  +FH A+  +V+  + DP +      V+G  NV+ AAKE  +V+++
Sbjct:    67 LQYDTVSAAINGCSGVFHLASPCIVDE-VQDPQKQLLDPAVKGTINVLTAAKEA-SVKRV 124

Query:   111 IYTSSFFALGSTDGYIADENQVHE---EKYFCTQ----YERSKAVADKIALQAASE-GLP 162
             + TSS  A+  +  + AD+ +  E    + +C Q    Y  SK +A+K A + A E GL 
Sbjct:   125 VVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKGLD 184

Query:   163 IVPVYPGVIYGP 174
             +V V PG + GP
Sbjct:   185 VVVVNPGTVMGP 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TIGR_CMR|GSU_1975 GSU_1975 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 207 (77.9 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 65/184 (35%), Positives = 96/184 (52%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-G----LPSE--GALELVYGDVT 54
             KILV+GA G++G  L  ALL +G+  RA V   S  S G    L  E   +L++  GD+ 
Sbjct:     7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAGDIR 66

Query:    55 DYRSLVDACFGCHVIFHTAALVE-PW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
             D   + +A  GC V+ H AAL+  P+    P  +   NV+G  NVVQAA+E   V K+++
Sbjct:    67 DPHGVREAMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG-VAKVVH 125

Query:   113 TSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGV 170
             TS+    G+     I +E+ +  +    + Y  SK  AD+IA+   S    P+  + P  
Sbjct:   126 TSTSEVYGTARFVPITEEHPLQGQ----SPYSASKIGADQIAMSFYSSFDTPVAIIRPFN 181

Query:   171 IYGP 174
              YGP
Sbjct:   182 TYGP 185

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

WB|WBGene00017429 F13D11.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 199 (75.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 62/191 (32%), Positives = 91/191 (47%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
             K+LV+GASG++G      LLK G+ VR  VR      +   I  L  +  LELV  D+ D
Sbjct:     7 KVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELVEADLLD 66

Query:    56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                   A  GC  + H A+   P + D  R     VEG  NV++A  E   V K++ TSS
Sbjct:    67 STCWKKAVAGCDYVLHVASPF-PIVSD-ERCITTAVEGTMNVLKAIAEDGNVRKLVLTSS 124

Query:   116 FFAL--GSTDGYIADENQVHE-EKYFCTQYERSKAVADKIA---LQAASEG--LPIVPVY 167
               A+  G T   + DE+     E      Y +SK +A+K A   ++   E    P+  + 
Sbjct:   125 CAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAAWDFIERLPEDKKFPMTVIN 184

Query:   168 PGVIYGPGKLT 178
             P +++GP  +T
Sbjct:   185 PTLVFGPAYIT 195

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-030131-5673 hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 48/162 (29%), Positives = 85/162 (52%)

Query:     4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALE----LVYGDVTDYRS 58
             +++G  G+LG  L   LL++  +V+ +     ++   L SE   +    ++ GD+T Y  
Sbjct:    12 VITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDVKVVIIQGDITKYED 71

Query:    59 LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
             + +A  G  ++FH A+LV+ W   P +  FAVNV+G +N ++A  E   ++ ++YTSS  
Sbjct:    72 VRNAFLGADLVFHAASLVDVWYKIPEKVIFAVNVQGTENAIKACVEIG-IQYLVYTSSME 130

Query:   118 ALGST---DGYIADENQVHEEKYFCTQYERSKAVADKIALQA 156
              +G     D ++          +    Y +SKA A+KI L+A
Sbjct:   131 VVGPNVKGDEFVRGNEDTPYNIFHEMPYPKSKAAAEKIVLEA 172

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	Al_scaffold_0007_743	annotation not avaliable (343 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	scaffold_601772.1	annotation not avaliable (421 aa)	•								0.543

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	229
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-72
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-46
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-33
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	5e-29
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-27
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-27
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-27
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-24
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-24
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	3e-24
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-23
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-22
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-21
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	3e-20
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-19
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-19
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-18
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	5e-18
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	7e-18
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-17
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-17
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	4e-17
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	5e-17
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	6e-17
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	2e-16
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	4e-16
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	2e-15
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	3e-15
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	5e-15
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	6e-15
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	1e-14
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	5e-14
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	1e-13
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	1e-13
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-13
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	6e-13
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	7e-13
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	7e-13
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	8e-13
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	1e-12
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	6e-12
pfam05368	232	pfam05368, NmrA, NmrA-like family	7e-12
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-11
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	2e-11
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	3e-11
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-11
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-11
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	6e-11
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-10
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-10
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	2e-10
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	2e-10
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	5e-10
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	8e-10
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-09
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-09
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-09
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	6e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	9e-09
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	2e-08
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	4e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	4e-08
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	5e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	5e-08
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-08
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	8e-08
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-08
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	2e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-07
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	5e-07
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	7e-07
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	3e-06
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	2e-05
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	2e-05
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	3e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	5e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	5e-05
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	6e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	7e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	1e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	2e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-04
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	3e-04
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	4e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	6e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	7e-04
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	7e-04
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	8e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	8e-04
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	9e-04
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	9e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	0.001
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	0.002
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.002
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.003
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	0.003
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	0.004

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  222 bits (567), Expect = 3e-72
 Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 2/173 (1%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G+LG  L  ALL QG+ VRALVR  SD   L     +E+V GD+TD  SL  A
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLP-VEVVEGDLTDAASLAAA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             GC  +FH AA    W  D    +  NVEG +NV+ AA E   V ++++TSS  ALG  
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAG-VRRVVHTSSIAALGGP 118

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
                DE     E+ F   Y RSK +A+   L+AA+EGL +V V P  ++GPG
Sbjct: 119 PDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVFGPG 171

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  155 bits (393), Expect = 5e-46
 Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 9/189 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK+LV+GA+G++G  +   LL+QG  VR LVR TSD   L      E+V GD+ D  SL 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-EIVEGDLRDPASLR 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GC  +FH AA    W PDP   +A NVEG +N+++AA E   VE+++YTSS   LG
Sbjct: 60  KAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLG 118

Query: 121 -STDGYIADEN-QVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPG-- 175
              DG  ADE      +      Y+RSK +A++ AL+ A+E GLP+V V P    GP   
Sbjct: 119 VRGDGTPADETTPSSLDD-MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177

Query: 176 KLT-TGNLV 183
           K T TG ++
Sbjct: 178 KPTPTGRII 186

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  121 bits (306), Expect = 2e-33
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ILV+G +G++G  L   LL  GH VR L R        P    +E V  D+TD   + 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDR--LRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 61  DACFGCH-VIFHTAALVEPWL---PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +   G    + H AA          DP+ F  VNV+G  N+++AA+    V++ ++ SS 
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSV 117

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
             + G       DE+           Y  SK  A+++    A   GLP+V + P  +YGP
Sbjct: 118 SVVYGDPPPLPIDED--LGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGP 175

Query: 175 G 175
           G
Sbjct: 176 G 176

Length = 314

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score =  110 bits (276), Expect = 5e-29
 Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 19/187 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV+GA+G++G  L   LL +G  VR  VR     +  PS    EL   D     S  D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN--AENAEPSVVLAELPDID-----SFTD 53

Query: 62  ACFGCHVIFHTAALV---EPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
              G   + H AA V        DP S +  VN E  + + +AA     V++ ++ SS  
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQ-GVKRFVFLSSVK 112

Query: 118 ALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPG 175
             G  T G   DE      +     Y RSK  A++  L+  AS+G+ +V + P ++YGPG
Sbjct: 113 VNGEGTVGAPFDETDPPAPQ---DAYGRSKLEAERALLELGASDGMEVVILRPPMVYGPG 169

Query: 176 KLTTGNL 182
               GN 
Sbjct: 170 --VRGNF 174

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  104 bits (263), Expect = 3e-27
 Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 20/188 (10%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V+GASG++G  L   LL++G++VRA VR   D      +  L  ++  L+L   D+ DY 
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS- 115
           S   A  GC  +FH A+ V+    DP        V+G  NV++A  + K+V+++++TSS 
Sbjct: 63  SFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFTSSV 122

Query: 116 ---FFALGSTDGYIADENQ-VHEEKYFCTQYER----SKAVADKIALQAASE-GLPIVPV 166
               +     +G + DE+     +  FC + +     SK +A+K A + A E GL +V V
Sbjct: 123 AAVVWNPNRGEGKVVDESCWSDLD--FCKKTKLWYALSKTLAEKAAWEFAEENGLDLVTV 180

Query: 167 YPGVIYGP 174
            P ++ GP
Sbjct: 181 NPSLVVGP 188

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  103 bits (259), Expect = 3e-27
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 11/178 (6%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++G+ V  L RR    S   + G +    GD+TD  +L   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR--SESLNTGRIRFHEGDLTDPDALERL 58

Query: 63  CFGC--HVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
                   + H AA   V     DP+ F   NV G   +++AA+    V++ ++ SS   
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVFASSSEV 117

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPG 175
            G        E+         + Y  +K  A+++    A   GL  V +    +YGPG
Sbjct: 118 YGDVADPPITEDTPL---GPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  105 bits (263), Expect = 5e-27
 Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSE---GALELVYGDVTDYR 57
            +LV+GA G++G  L   LL++GH VRAL    S  S GL           + GDV D  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 58  SLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +      C V+FH AAL+        P  +   NV G  NV++AA      +++++TS+
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-LYRKRVVHTST 119

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
               G+      DE+  H   Y       Y  SK  AD++A     S GLP+  + P   
Sbjct: 120 SEVYGTAQDVPIDED--HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 172 YGPG 175
           YGP 
Sbjct: 178 YGPR 181

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 98.1 bits (245), Expect = 2e-24
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 24/195 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELV-YGDV 53
            +LV+GA+G++   +   LLK G+ VR  VR  S  + L            LE V   D+
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           T   +  +A  G   + H A+      PD         VEG  NV++AAK   +V++++ 
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVL 120

Query: 113 TSSFFALGSTDGYIADENQVHEEK-----YFCTQ-----YERSKAVADKIA---LQAASE 159
           TSS  A+G  D    D  +V  E+               Y  SK +A+K A   ++    
Sbjct: 121 TSSVAAVG--DPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKP 178

Query: 160 GLPIVPVYPGVIYGP 174
              ++ + PG + GP
Sbjct: 179 KFELITINPGYVLGP 193

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 95.4 bits (238), Expect = 2e-24
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV GA+G +G  +   LL +G+ VRALVR  S    L + GA E+V GD+TD  SL  
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGA-EVVVGDLTDAESLAA 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
           A  G   +   A           R  AV+ +G  N++ AAK+   V++ +  SS   +G+
Sbjct: 60  ALEGIDAVISAAGSGG---KGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSS---IGA 112

Query: 122 TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                  E            Y  +K  A+   L+A   GL    V PG
Sbjct: 113 DKPSHPLEALGP--------YLDAKRKAEDY-LRA--SGLDYTIVRPG 149

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 97.4 bits (243), Expect = 3e-24
 Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 22/186 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVTD 55
           +LV+GA G++G  L  AL++QG+ VRA V   S       D S    +  +E+V GD+ D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
             S+  A  GC V+FH AAL+   +P     P  +   NV G  NV+QAA++   VEK++
Sbjct: 61  PDSVRKAMKGCDVVFHLAALIA--IPYSYIAPDSYVDTNVTGTLNVLQAARDLG-VEKVV 117

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYP 168
           +TS+    G T  Y+     + E+     Q  Y  SK  AD++AL    S   P+  + P
Sbjct: 118 HTSTSEVYG-TAQYVP----IDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRP 172

Query: 169 GVIYGP 174
              YGP
Sbjct: 173 FNTYGP 178

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 95.0 bits (236), Expect = 2e-23
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 20/191 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTD 55
           +LV+GASG++   +   LL++G+ VRA VR  S +        L +  G LEL   D+TD
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +S  +   GC  +FH A  V     DP+      + G  N ++AA   K+V++ + TSS
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

Query: 116 FFALG----STDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQAASE-GLPI 163
             ++     + +G + DE   + E+ F +        Y  SK +A+K A + A E  + +
Sbjct: 121 AGSVLIPKPNVEGIVLDEKSWNLEE-FDSDPKKSAWVYAASKTLAEKAAWKFADENNIDL 179

Query: 164 VPVYPGVIYGP 174
           + V P +  G 
Sbjct: 180 ITVIPTLTIGT 190

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 9/178 (5%)

Query: 3   ILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSL 59
           +LV+G SG+ G RL   LL++ G  VR+         +S       +E + GD+TD   +
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN-IEFLKGDITDRNDV 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FA 118
             A  G   +FHTAA+V    P    ++ VNV G +NV+ A +    V+K +YTSS    
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPR-DLYWEVNVGGTQNVLDACQRCG-VQKFVYTSSSSVI 118

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPG 175
            G  + +  DE   +        Y  +KA+A+ I L+A   + L    + P  I+GPG
Sbjct: 119 FGGQNIHNGDETLPYPPL-DSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPG 175

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 85.5 bits (212), Expect = 7e-21
 Identities = 61/171 (35%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL+ GA+G++G  L   LL+QGH V  LVR T  +S    E    +V GD+ D  SL DA
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA-VVEGDLRDLDSLSDA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G  V+ H A        D   F  V+VEG +NV++AAKE   V+  I+ SS  A G  
Sbjct: 60  VQGVDVVIHLAG----APRDTRDFCEVDVEGTRNVLEAAKEA-GVKHFIFISSLGAYGDL 114

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                            + Y   KA  + +        LP   V PGVIYG
Sbjct: 115 HEETEPSPS--------SPYLAVKAKTEAV---LREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 86.2 bits (214), Expect = 3e-20
 Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 23/190 (12%)

Query: 4   LVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALEL---VYGDVTDYRS 58
           LV+G  G+LG  +   LL++G    VR    R S    L     L++   + GDVTD + 
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSP-ELLEDFSKLQVITYIEGDVTDKQD 59

Query: 59  LVDACFGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           L  A  G  V+ HTAA+++ +          VNV+G +NV+ A  +   V  ++YTSS  
Sbjct: 60  LRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLVYTSSME 118

Query: 118 ALGSTDG----YIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI--------VP 165
            +G           DE   +E       Y  SKA+A+K+ L   + G  +          
Sbjct: 119 VVGPNSYGQPIVNGDETTPYEST-HQDPYPESKALAEKLVL--KANGSTLKNGGRLYTCA 175

Query: 166 VYPGVIYGPG 175
           + P  I+G G
Sbjct: 176 LRPAGIFGEG 185

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--------SGLPSEGALELVYGDVT 54
           + V+G +G+LG  L   LL+ G  V  LVR  S          +GL ++  + ++ GD+T
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADR-VRVLEGDLT 59

Query: 55  ---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
                      R L         + H AA  +   P     +  N++G ++V++ A    
Sbjct: 60  QPNLGLSAAASRELAG---KVDHVIHCAASYDFQAP-NEDAWRTNIDGTEHVLELAARLD 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
             ++  Y S+ +  G+ +G I  E +++  + F   YE+SKA A+++   AA++ +P+  
Sbjct: 116 I-QRFHYVSTAYVAGNREGNI-RETELNPGQNFKNPYEQSKAEAEQLVRAAATQ-IPLTV 172

Query: 166 VYPGVIYGPGKLTTGN 181
             P ++ G  K  TG 
Sbjct: 173 YRPSIVVGDSK--TGR 186

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 82.0 bits (203), Expect = 2e-19
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 40/176 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++GH V  + R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLD---------------------------- 32

Query: 63  CFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                V+ H AALV       +P   F  NV G  N+++AA++   V++ +Y SS    G
Sbjct: 33  -----VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYG 86

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGPG 175
           S +G   +E          + Y  SK  A+ +      S GLP+V +    +YGPG
Sbjct: 87  SPEGLPEEE---ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPG 139

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 25/178 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG---ALELVYGDVTDYR 57
           M + V GA+G++G  + + L K+G  V    R  +    L   G    +  V  D+ D  
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S+  A  G  V+ +    +  +      F  V+VEG + + +AAKE   VE++I+ S   
Sbjct: 61  SIRKALEGSDVVINLVGRL--YETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHIS--- 114

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           ALG      AD N         ++Y RSKA  ++ A++ A     I  V P V++G  
Sbjct: 115 ALG------ADANSP-------SKYLRSKAEGEE-AVREAFPEATI--VRPSVVFGRE 156

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 80.0 bits (198), Expect = 5e-18
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 43/207 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSD-------ISGLPSEGA------- 45
            +L++GA+G+LG  L   LLK+ +  +   LVR   +       I  L   G        
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 46  ---LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
              +++V GD++         DY+ L +      VI H  A V  W+         NV G
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEV---DVIIHNGANVN-WVYPYEELKPANVLG 116

Query: 94  LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSK 146
            K +++ A   K  + + + S+     + +    +     E              Y +SK
Sbjct: 117 TKELLKLAATGKL-KPLHFVSTLSVFSAEE---YNALDDEESDDMLESQNGLPNGYIQSK 172

Query: 147 AVADKIALQAASEGLPIVPVYPGVIYG 173
            VA+K+  +AA+ GLP+  + PG I+G
Sbjct: 173 WVAEKLLREAANRGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 80.9 bits (200), Expect = 7e-18
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 34/201 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD-------ISGLPSEG-------- 44
            +L++GA+G+LG  L   LL++     V  LVR  S+          L S          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 45  -ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGL 94
             +E+V GD++         ++  L +       I H  ALV  W+   S     NV G 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENV---DTIVHNGALVN-WVYPYSELRGANVLGT 116

Query: 95  KNVVQAAKETKTVEKIIYTSSFFAL--GSTDGYIADENQVHEEKYFCTQYERSKAVADKI 152
           + V++ A   +  + + Y S+              D+  V         Y +SK VA+ +
Sbjct: 117 REVLRLAASGRA-KPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELL 175

Query: 153 ALQAASEGLPIVPVYPGVIYG 173
             +A+  GLP+  V PG I G
Sbjct: 176 VREASDRGLPVTIVRPGRILG 196

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 53/206 (25%), Positives = 79/206 (38%), Gaps = 38/206 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP---------------SEG 44
             +L++GA+G+LG  L   LL +    V  LVR  SD + L                S  
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 45  ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLK 95
            +E+V GD+           ++ L +      +I H AALV   +   S     NV G  
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQELAENV---DLIIHNAALVN-HVFPYSELRGANVLGTA 116

Query: 96  NVVQAAKETKTVEKIIYTSSFFALGSTDGY-------IADENQVHEEKYFCTQYERSKAV 148
            V++ A   K  + + Y SS     +                +   +      Y RSK V
Sbjct: 117 EVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLA-GGYGRSKWV 174

Query: 149 ADKIALQAASEGLPIVPVYPGVIYGP 174
           A+K+  +A   GLP+    PG I G 
Sbjct: 175 AEKLVREAGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 17/193 (8%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V  ASGY+G  L   LL +G++V A V++  +      I GL   E  L++   D  DY 
Sbjct: 11  VMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYH 70

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S++DA  GC  +F        +     +   V V    NV++A  +T T+EK+++TSS  
Sbjct: 71  SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130

Query: 118 ALGSTDGYIADENQVHEEKY----FCTQYERSKAVADKIALQAA-----SEGLPIVPVYP 168
           A+   D  I+ +  V E  +    FC +++   A+A  ++ + A       G+ +V +  
Sbjct: 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINA 190

Query: 169 GVIYGPGKLTTGN 181
           G++ GP  LT  N
Sbjct: 191 GLLMGPS-LTQHN 202

Length = 297

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 13/186 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYR 57
           ++LV+G +G++G  L   LL++GH V  L      +  ++     +  ++ + GD+ D  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLP--EVKPNVKFIEGDIRDDE 58

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +  A  G   +FH AA   V   + DP +   VNV G  N+++AA++   V++ +Y SS
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKRFVYASS 117

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA-LQAASEGLPIVPVYPGVIYGP 174
               G       DE+           Y  SK   +    + A   GLP V +    +YGP
Sbjct: 118 SSVYGDPPYLPKDEDHPPNPLS---PYAVSKYAGELYCQVFARLYGLPTVSLRYFNVYGP 174

Query: 175 GKLTTG 180
            +   G
Sbjct: 175 RQDPNG 180

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 76.5 bits (189), Expect = 5e-17
 Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 39/202 (19%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGL-----------PSEGALEL--- 48
           ++GA+G+LG  L   LL+    V+   LVR     S L             +    L   
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 49  --VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
             V GD++         D++ L +      VI H AA V  ++   S   A NV G + V
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAE---EVDVIIHNAATVN-FVEPYSDLRATNVLGTREV 116

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE------KYFCTQYERSKAVADK 151
           ++ AK+ K +    + S+ +  G   G + ++    +E            Y +SK +A++
Sbjct: 117 LRLAKQMKKL-PFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQ 175

Query: 152 IALQAASEGLPIVPVYPGVIYG 173
           + ++ A+ GLP+V   P +I G
Sbjct: 176 L-VREAAGGLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 77.8 bits (191), Expect = 6e-17
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 19/202 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G++V+A VR  +D       L  +GA   L+L   D+ +
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   A  GC  +FHTA+ V   + DP +      ++G  NV+   KET +V+++I TS
Sbjct: 68  ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTS 127

Query: 115 SFFALGSTDGYIADENQVHEEKYF-----CTQ----YERSKAVADKIALQAASE-GLPIV 164
           S  A+      I + N V +E +F     C +    Y  SK +A+  A + A + G+ +V
Sbjct: 128 STAAVLFRQPPI-EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186

Query: 165 PVYPGVIYGPGKLTTGNLVAKL 186
            + PG I GP    T N   +L
Sbjct: 187 VLNPGFICGPLLQPTLNFSVEL 208

Length = 322

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 24/194 (12%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVT 54
           V+G   +LG  +   LL+ G+SVR  V    D   L           S   +  V  ++T
Sbjct: 58  VTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLT 117

Query: 55  DYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           +  SL +A  GC  +FHT+A V+P  L   ++  A +  +  +NV++A   T++V K ++
Sbjct: 118 EPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVF 177

Query: 113 TSSFFALGSTDGY------IADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GL 161
           TSS  A      Y      + DE    +E  FC      Y   K  A+K A +AA   GL
Sbjct: 178 TSSLLACVWRQNYPHDLPPVIDEESWSDES-FCRDNKLWYALGKLKAEKAAWRAARGKGL 236

Query: 162 PIVPVYPGVIYGPG 175
            +  + P ++ GPG
Sbjct: 237 KLATICPALVTGPG 250

Length = 367

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 75.6 bits (186), Expect = 4e-16
 Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 41/199 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
            +L++G  GY G RL  AL K G  V  L         LP    ++ +  DV D   L  
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHV-ILFDIRRPQQELPEG--IKFIQADVRDLSQLEK 57

Query: 62  ACFGCHVIFHTAA------------LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           A  G   +FH A+            L+E           +NV G +N++Q     + V +
Sbjct: 58  AVAGVDCVFHIASYGMSGREQLNRELIE----------EINVRGTENIIQVCVRRR-VPR 106

Query: 110 IIYTSSF-FALGSTDGYIADEN----QVHEEKYFCTQYERSKAVADKIALQAASEGLP-- 162
           +IYTS+F    G       DE+     +         Y R+K++A+++ L+A +  LP  
Sbjct: 107 LIYTSTFNVIFGGQPIRNGDESLPYLPLDL---HVDHYSRTKSIAEQLVLKANNMPLPNN 163

Query: 163 -----IVPVYPGVIYGPGK 176
                   + P  IYGPG+
Sbjct: 164 GGVLRTCALRPAGIYGPGE 182

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 73.7 bits (181), Expect = 2e-15
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 29/195 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR      +   +  LP +   L L   D+  
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  DA  GC  +FH A  ++    DP +      V G+ ++++A  + KTV +I++TS
Sbjct: 68  EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127

Query: 115 SFFALGSTDGYIADENQ--VHEEKY-----FCTQ-------YERSKAVADKIALQAASE- 159
           S    G+ +    +E+Q  V++E       FC +       Y  SK +A+K A + A+E 
Sbjct: 128 S---AGTVN---VEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN 181

Query: 160 GLPIVPVYPGVIYGP 174
           GL  + + P ++ GP
Sbjct: 182 GLDFISIIPTLVVGP 196

Length = 351

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 73.0 bits (179), Expect = 3e-15
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 18/188 (9%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G+L   L   LL++G++V   VR      + + +  L   G L++   D+TD  S
Sbjct: 14  VIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEES 73

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC ++FH A  V     DP        ++G+ NV++A  + K+V+++I TSS  
Sbjct: 74  FEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133

Query: 118 ALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPV 166
           A+     S  G + +E        +  EK     Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193

Query: 167 YPGVIYGP 174
            P ++ GP
Sbjct: 194 IPTLMAGP 201

Length = 338

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 26/204 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
              V GASG +G  +   L ++G  VR + R  S ++ LP    +E+V  D  D  S++ 
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLPG---VEIVAADAMDASSVIA 57

Query: 62  ACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           A  G  VI+H A      W      F  +    ++NVV AA+      K++   + +  G
Sbjct: 58  AARGADVIYHCANPAYTRW---EELFPPL----MENVVAAAEA--NGAKLVLPGNVYMYG 108

Query: 121 STDGYIADE---NQVHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPVYPGVIYGPGK 176
              G    E    Q    K       R +A  ++  L A ++G +  + V     YGPG 
Sbjct: 109 PQAGSPITEDTPFQPTTRK------GRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGA 162

Query: 177 ---LTTGNLVAKLQWKKVDLVKDI 197
                   L A LQ K      ++
Sbjct: 163 INSWLGAALFAILQGKTAVFPGNL 186

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 18/182 (9%)

Query: 4   LVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           LV G SG+LG  L   LL++G+ +V     R +      S G ++   GD+TD + L  A
Sbjct: 3   LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62

Query: 63  --CFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
               G +V+FHTA+      PD       ++ VNV+G +NV++A ++   V+K++YTSS 
Sbjct: 63  FNEKGPNVVFHTAS------PDHGSNDDLYYKVNVQGTRNVIEACRKC-GVKKLVYTSSA 115

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYG 173
             +    D    DE+  + +K     Y  +KA+A+K+ L+A     GL    + P  I+G
Sbjct: 116 SVVFNGQDIINGDESLPYPDK-HQDAYNETKALAEKLVLKANDPESGLLTCALRPAGIFG 174

Query: 174 PG 175
           PG
Sbjct: 175 PG 176

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+GA+GY+GGRL   LL++GH VRALVR    ++  P    + +V GD+ D  SL  A
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             G    ++   LV         F   +    +N  +AA+    V++IIY       G
Sbjct: 61  LEGIDTAYY---LVHSMGSGGD-FEEADRRAARNFARAARAAG-VKRIIYLGGLIPKG 113

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALEL------VYGDV 53
           LV+G  G+LG  +   LL++   ++ +  R  D +  P         +       + GD+
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEI--RVLDKAFGPELIEHFEKSQGKTYVTDIEGDI 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            D   L  AC G  V+ HTAA+V+    P+      VNV G + V++A  +   V++++Y
Sbjct: 61  KDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQN-NVKRLVY 119

Query: 113 TSSFFALG-STDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQA----ASEGLPIV 164
           TSS    G +  G     N V +  Y  T    Y  SK +A+ I L A      +G  +V
Sbjct: 120 TSSIEVAGPNFKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGYLV 178

Query: 165 --PVYPGVIYGPG 175
              + P  IYG G
Sbjct: 179 TCALRPMYIYGEG 191

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 21/187 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR-ALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++GASG++G RL   LL    + R  L+   S  +  PS               +L
Sbjct: 1   MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKA--PSGAPRVTQIAGDLAVPAL 58

Query: 60  VDACF--GCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           ++A       V+FH AA+V      D    + VNV+G +N+++A ++     + ++TSS 
Sbjct: 59  IEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSSL 118

Query: 117 --FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPG 169
             + L   +                + Y   KA+ + + L   S     +G  +    P 
Sbjct: 119 AVYGLPLPNPVTDHTALDPA-----SSYGAQKAMCE-LLLNDYSRRGFVDGRTLRL--PT 170

Query: 170 VIYGPGK 176
           V   PG+
Sbjct: 171 VCVRPGR 177

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 69.0 bits (168), Expect = 1e-13
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 20/187 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL---PSEGALE---LVYGDVTDY 56
           + V+GA GY+   +   LL++G++V+  VR   D         EG  E   L   D+ DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +L  A  GC  +FHTA+   P   DP +     V G K V+ AA E K V++++ TSS 
Sbjct: 73  EALKAAIDGCDGVFHTAS---PVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSI 128

Query: 117 FALGSTDGYIADENQVHEEKY----FCTQ----YERSKAVADKIALQAASE-GLPIVPVY 167
            A+   D     E  V E  +    FC      Y   K VA++ A + A E G+ +V + 
Sbjct: 129 GAV-YMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 168 PGVIYGP 174
           P ++ GP
Sbjct: 188 PVLVLGP 194

Length = 342

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 16/118 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G LG  +   LL +  SV ALVR         ++G  E+  GD  D  +L  A
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGV-EVRQGDYDDPETLERA 59

Query: 63  CFGCHVIF--HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
             G   +     + L +             ++  KN + AAK+   V+ I+Y S+  A
Sbjct: 60  FEGVDRLLLISPSDLEDR------------IQQHKNFIDAAKQ-AGVKHIVYLSASGA 104

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 66.8 bits (163), Expect = 6e-13
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 25/195 (12%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGA--LELVYGDVTDYRSLV 60
           V+GA+GY+G  L   LL++G++V A +R  +    L S  +    L L   D+ +  S  
Sbjct: 15  VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74

Query: 61  DACFGCHVIFHTAALVEPWLPD---------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           +A  GC  +FH AA +E  +            S+     ++G  NV+++  ++KTV++++
Sbjct: 75  EAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVV 134

Query: 112 YTSSFFALGSTDG-----YIADEN-QVHEEKYFCTQ-----YERSKAVADKIALQAASE- 159
           +TSS   L + D       + DE  Q   +  + T+     Y  SK + ++ A + A E 
Sbjct: 135 FTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN 194

Query: 160 GLPIVPVYPGVIYGP 174
           G+ +V V    + GP
Sbjct: 195 GIDLVSVITTTVAGP 209

Length = 353

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 19/188 (10%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTDYR 57
           V+GASGY+   L   LL++G++V+A VR  +D       L  +GA   L L   ++ +  
Sbjct: 9   VTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEG 68

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           S      GC  +FHTA+     + DP +      V+G  NV+++  +  +V++++ TSS 
Sbjct: 69  SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128

Query: 117 FALG-----STDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPV 166
            A+       T   + DE     +  FC +    Y  SK +A++ A + A E G+ +V +
Sbjct: 129 AAVAYNGKPLTPDVVVDETW-FSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTI 187

Query: 167 YPGVIYGP 174
            P ++ GP
Sbjct: 188 NPAMVIGP 195

Length = 322

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 46/190 (24%), Positives = 70/190 (36%), Gaps = 28/190 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           I V GA+G  G RL   LL +GH V AL R  S          +  V  D+ D   L +A
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKDLFDLADLAEA 56

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G   +            D         +G+K+++ AA     V +I+  S+       
Sbjct: 57  LAGVDAVVDAFG---ARPDDS--------DGVKHLLDAAARAG-VRRIVVVSAAGLYRDE 104

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY----GPGKLT 178
            G    ++           Y R+KA A++  L+A   GL    V PG ++       ++ 
Sbjct: 105 PGTFRLDD-----APLFPPYARAKAAAEE-LLRA--SGLDWTIVRPGALFDEEGETYEIG 156

Query: 179 TGNLVAKLQW 188
           T    A    
Sbjct: 157 TEGDPAGESS 166

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 65.7 bits (160), Expect = 8e-13
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+GA+G++GG +   LL +GH VRA VR     + L   G +E+V GD+ D +SLV
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--AGGVEVVLGDLRDPKSLV 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +   + L++        F AV V  +    +AA     V+  +  S   A  
Sbjct: 59  AGAKGVDGVLLISGLLDG----SDAFRAVQVTAVVRAAEAAGA--GVKHGVSLSVLGADA 112

Query: 121 STDGYIADENQVHEE 135
           ++   +A      E 
Sbjct: 113 ASPSALARAKAAVEA 127

Length = 275

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 42/212 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KIL++GA+G LG  L   L ++G+ V    R  + +  L           D+TD  ++ +
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL-----------DLTDPDAVEE 49

Query: 62  ACFGC--HVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A       VI + AA           DP   + VNV   +N+ +AAKE     ++I+ S+
Sbjct: 50  AIRDYKPDVIINCAAYTRVDKCES--DPELAYRVNVLAPENLARAAKEVGA--RLIHIST 105

Query: 116 --FFALGSTDGYIADE--NQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
              F  G    Y  ++  N           Y +SK + +   L A    L I+      +
Sbjct: 106 DYVFD-GKKGPYKEEDAPN-------PLNVYGKSKLLGEVAVLNANPRYL-ILRT--SWL 154

Query: 172 YGPGKLTTGNLVAKL-----QWKKVDLVKDIF 198
           YG  K    N V  +     + K+V++V D  
Sbjct: 155 YGELKN-GENFVEWMLRLAAERKEVNVVHDQI 185

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 19/181 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSL 59
           MK+ V+GA+G++G  +   L+  GH V  L R  SD      E A   V+ GD+ D   L
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVVGLAR--SDAGAAKLEAAGAQVHRGDLEDLDIL 58

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFA---VNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      + H A        D   F     V+   ++ + +A + T   + +IYTS  
Sbjct: 59  RKAAAEADAVIHLAF-----THDFDNFAQACEVDRRAIEALGEALRGTG--KPLIYTSGI 111

Query: 117 FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI-VPVYPGVIYGPG 175
           + LG T G   D     EE         ++AV++  AL+ A  G+   V   P V++G G
Sbjct: 112 WLLGPTGGQEED-----EEAPDDPPTPAARAVSEAAALELAERGVRASVVRLPPVVHGRG 166

Query: 176 K 176
            
Sbjct: 167 D 167

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 62.3 bits (152), Expect = 7e-12
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 15/117 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDIS-GLPSEGALELVYGDVTDYRSLV 60
           ILV GA+GY GG +  A LK GH VRALVR   S+++  L + G  ELV GD+ D+ SLV
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGV-ELVEGDLDDHESLV 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +A  G  V+F               + +  +E  K +  AAKE   V+  I  S F 
Sbjct: 60  EALKGVDVVFSVTGF----------WLSKEIEDGKKLADAAKEAG-VKHFIP-SEFG 104

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTD- 55
            +IL++G +G+LG  LC  LL+ GH V  +      R  +I  L      E +  DVT+ 
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEP 60

Query: 56  YRSLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
               VD       I+H A    P  +  +P +    NV G  N++  AK      +++  
Sbjct: 61  LYLEVD------QIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA--RVLLA 112

Query: 114 SS 115
           S+
Sbjct: 113 ST 114

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score = 62.0 bits (150), Expect = 2e-11
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 20/191 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G+++ A VR   D       L  +GA   L+L   D+ D
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN--VEGLKNVVQAAKETKTVEKIIYT 113
             S   A  GC  +FHTA+ V   +    +   +N  V G  NV++   +  +V+++I T
Sbjct: 68  EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT 127

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQ---------YERSKAVADKIALQAASEG-LPI 163
           SS  A+ + +  +   N V +E +F            Y  SK +A+  A + A +  + +
Sbjct: 128 SSMAAVLAPETKLG-PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186

Query: 164 VPVYPGVIYGP 174
           + + PG++ GP
Sbjct: 187 IVLNPGLVTGP 197

Length = 325

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 18/128 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
           + L++G +G  G  L   LL++G+ V  +VRR+S  +         ++  + L YGD+TD
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60

Query: 56  YRSL------VDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
             SL      V        I+H AA   V+    DP     VN  G  N+++A +     
Sbjct: 61  SSSLRRAIEKVRP----DEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116

Query: 108 EKIIYTSS 115
            +    SS
Sbjct: 117 ARFYQASS 124

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+LV+G +GY+G      LLK GH V  L          L      +   GD+ D R+L
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQF-KFYEGDLLD-RAL 58

Query: 60  VDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           + A F  +    + H AA   V   + +P +++  NV G  N+++A  +T  V+K I++S
Sbjct: 59  LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSS 117

Query: 115 S 115
           +
Sbjct: 118 T 118

Length = 329

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 3   ILVSGASGYLGGRLCHALLK-QGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLV 60
           ILV GA+G  GG +  ALLK  G  VRAL R   S  +   +   +E+V GD+ D  SL 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
            A  G + +F      E    D        +   KNVV AAK    V+  +++S
Sbjct: 61  AALKGVYGVFLVTDFWEAGGED-------EIAQGKNVVDAAKRAG-VQHFVFSS 106

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G +G ++   LL+ G  VRALVR     + L + GA E+V GD+ D   L  A
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGA-EVVVGDLDDPAVLAAA 59

Query: 63  CFGCHVIFHTA-----ALVEPWLPDPSRFFAVNVE--GLKNVVQ 99
             G   +F  A     A   P     +  FA  +   G+K VV 
Sbjct: 60  LAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVN 103

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 33/206 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISG-----LPSEGALELVYGD 52
           M++L++G +G++G  L    LKQG  V     L+RR S  +         +G +  V+GD
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEP---W-LPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + +   L D      +I HTAA  +P        P   F  N  G  NV++AA++     
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAA--QPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 109 KIIYTSS---FFALGSTDGYIADENQVH---EEKY------------FCTQYERSKAVAD 150
             I+TS+   +  L +       E +     E                 + Y  SK  AD
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178

Query: 151 KIALQ-AASEGLPIVPVYPGVIYGPG 175
           +   +     GL  V    G + GP 
Sbjct: 179 QYVQEYGRIFGLKTVVFRCGCLTGPR 204

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 58.6 bits (143), Expect = 2e-10
 Identities = 48/186 (25%), Positives = 70/186 (37%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++    ++  L    GDV 
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   L  A    G   +FH AA     LVE    +P      NV G +NV +AA E   V
Sbjct: 61  DRERLERAMEQHGVDTVFHAAALKHVPLVE---YNPMEAIKTNVLGTENVAEAAIENG-V 116

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           EK +  S+  A+  T+   A                 +K +A+K+   A  E       +
Sbjct: 117 EKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRESGSGKTRF 159

Query: 168 PGVIYG 173
             V +G
Sbjct: 160 SVVRFG 165

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSE---GALELVYGDVTDYR 57
           KILV+G +GY+G      LL+ GH V  L          LP       +  V GD+ D R
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRD-R 59

Query: 58  SLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            L+D  F  H    + H A L  V   +  P +++  NV G  N+++A ++   V+K I+
Sbjct: 60  ELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VKKFIF 118

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKI--ALQAASEGLPIV 164
           +SS    G           + E+        Y RSK ++++I   LQ A      V
Sbjct: 119 SSSAAVYGEP-----SSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYV 169

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 59.7 bits (144), Expect = 2e-10
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I V+GASG LG  L   LL QGH V  + R   D    PS  + + +  D+ D  ++ 
Sbjct: 1   MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--SWPS--SADFIAADIRDATAVE 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            A  G  V+ H A     W+   +    +N++G  NV++A  ET T  +I++TSS
Sbjct: 57  SAMTGADVVAHCA-----WVRGRND--HINIDGTANVLKAMAETGT-GRIVFTSS 103

Length = 854

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 47/187 (25%), Positives = 66/187 (35%), Gaps = 39/187 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL+ G + ++G  L   LL  GH V    R  +       EG   +V GD  D  +L 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD--LPEGVEHIV-GDRNDRDALE 57

Query: 61  DA----CFGCHVIF----HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           +      F   V+     +T   VE  L      F                   V++ I+
Sbjct: 58  ELLGGEDF--DVVVDTIAYTPRQVERAL----DAFK----------------GRVKQYIF 95

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCT----QYERSKAVADKIALQAASEGLPIVPVYP 168
            SS          I +   + E           Y R K  A+ + ++AA    P   V P
Sbjct: 96  ISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAA--AFPYTIVRP 153

Query: 169 GVIYGPG 175
             IYGPG
Sbjct: 154 PYIYGPG 160

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 33/196 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV----------RRTSDISGLPSEGALELVY 50
           MKILV+G +G++G      LL +    + +               D+S  P       V 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPR---YRFVK 57

Query: 51  GDVTDYRSLVDACFG---CHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ D   LVD  F       + H AA   V+  + DP  F   NV G   +++AA++  
Sbjct: 58  GDICDAE-LVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYG 116

Query: 106 TVEKIIYTSSFFALGSTD---GYIADENQVHEEKYFC--TQYERSKAVADKIALQAA-SE 159
            V++ ++        STD   G + D+ +  E       + Y  SKA AD +      + 
Sbjct: 117 -VKRFVHI-------STDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTY 168

Query: 160 GLPIVPVYPGVIYGPG 175
           GLP+V       YGP 
Sbjct: 169 GLPVVITRCSNNYGPY 184

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 32/133 (24%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVYG 51
           K+LV+G +GY+G      LL+ G+ V          R  + R   I        +E   G
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIR-------IEFYEG 53

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAK 102
           D+ D R+ +D  F  H    + H AAL      V+     P +++  NV G  N+++A +
Sbjct: 54  DIRD-RAALDKVFAEHKIDAVIHFAALKAVGESVQ----KPLKYYDNNVVGTLNLLEAMR 108

Query: 103 ETKTVEKIIYTSS 115
               V+  +++SS
Sbjct: 109 AHG-VKNFVFSSS 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 18/123 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQ----GHSVRALVRRTSDISGLPSEGA-LELVYGDVTDY 56
           KI + GA+G  G     A++++    GH V ALVR   D + LP+E   L++V GDV D 
Sbjct: 1   KIAIIGATGRTG----SAIVREALARGHEVTALVR---DPAKLPAEHEKLKVVQGDVLDL 53

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             + +A  G   +   +AL       P     ++ EG +N+V A K      ++I     
Sbjct: 54  EDVKEALEGQDAVI--SALGTRNDLSP---TTLHSEGTRNIVSAMKAAGVK-RLIVVGGA 107

Query: 117 FAL 119
            +L
Sbjct: 108 GSL 110

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 20/183 (10%)

Query: 3   ILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-L 59
           ILV+GA+G LG  L   L    +   V  L RR        S   +E V  D+ D  +  
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPP----GSPPKVEYVRLDIRDPAAAD 56

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V        + H A +++P   D +    +NV+G +NV+ A      V +++ TSS    
Sbjct: 57  VFREREADAVVHLAFILDP-PRDGAERHRINVDGTQNVLDACAAAG-VPRVVVTSSVAVY 114

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-------ASEGLPIVPVYPGVIY 172
               G   D      E              DK  ++            L +  + P  I 
Sbjct: 115 ----GAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170

Query: 173 GPG 175
           GPG
Sbjct: 171 GPG 173

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYRS 58
           ILV+G +G++G  L   LL++G+ V  +      R  +I       A   V  D+ D   
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTAD 61

Query: 59  LVDACFGCHVIFHTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            V A      +FH AA  +  L   DP      NV    NV++A +    V++I++ SS 
Sbjct: 62  KV-AKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRIVFASSS 119

Query: 117 FALGSTDGYIADEN 130
              G        E+
Sbjct: 120 TVYGEAKVIPTPED 133

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 54.6 bits (132), Expect = 6e-09
 Identities = 40/169 (23%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           KI ++GA+G LGG +  ALL   G +V  L R +S  S       +++V  D   + SLV
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +                           ++ AA     V++ I   S F + 
Sbjct: 61  AALKGVDAVISALGGAAI-------------GDQLKLIDAAIAAG-VKRFI--PSEFGVD 104

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                      + +EK         + V     L+A + GLP   V  G
Sbjct: 105 YDRIGALPLLDLFDEK---------RDVRR--YLRAKNAGLPWTYVSTG 142

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 29/169 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  L    L     V A  R                   D+TD  +++
Sbjct: 1   MKILITGANGQLGTELR-RALPGEFEVIATDRAE----------------LDITDPDAVL 43

Query: 61  DACFGCH--VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +        V+ + AA   V+    +P   FAVN  G +N+ +AA E     ++++ S+ 
Sbjct: 44  EVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTD 101

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
           +   G   G   + +  +        Y RSK   +  A++AA     I+
Sbjct: 102 YVFDGEKGGPYKETDTPNPLNV----YGRSKLAGE-EAVRAAGPRHLIL 145

Length = 281

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++G +G +G  L   LL++GH V  +    T     LP    L +V G + D ++L
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIAD-KAL 59

Query: 60  VDACFGC----HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           VD  FG      V+   AA  +P  W  D       NV G  NVVQAAK+   V+++IY
Sbjct: 60  VDKLFGDFKPDAVVHTAAAYKDPDDWYEDT----LTNVVGGANVVQAAKKA-GVKRLIY 113

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++     E  L    GDV 
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVR 312

Query: 55  DYRSLVDA--CFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   +  A       ++FH AA     LVE    +P      NV G +NV +AA +   V
Sbjct: 313 DRDRVERAMEGHKVDIVFHAAALKHVPLVE---YNPEEAIKTNVLGTENVAEAAIKNG-V 368

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           +K +  S+  A+  T+   A                 +K +A+K+   A          +
Sbjct: 369 KKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRNVSGTGTRF 411

Query: 168 PGVIYG 173
             V +G
Sbjct: 412 CVVRFG 417

Length = 588

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLPSEGALE--LVYGDVTDYR 57
           +IL++G  G +G  L   L K+ G  +V A     SDI   P+   L     Y DV D++
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIA-----SDIRKPPAHVVLSGPFEYLDVLDFK 55

Query: 58  SLVDAC--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           SL +         I H AAL+    E    +P   + VN+ GL NV++ A+E     +I 
Sbjct: 56  SLEEIVVNHKITWIIHLAALLSAVGEK---NPPLAWDVNMNGLHNVLELAREHN--LRIF 110

Query: 112 YTSSFFALGST 122
             S+  A G T
Sbjct: 111 VPSTIGAFGPT 121

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL--------VRRTSD-ISGLPSEGALELVYG 51
           MKILV+GA+G++G  +   LL++G  V  +        VR     +  L   G  + V G
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
           D+ D R  +   F  H    + H AA   V   L +P  +   N+ G  N+++  +    
Sbjct: 61  DLED-REALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG- 118

Query: 107 VEKIIY--TSSFFAL 119
           V+ ++Y  +SS + L
Sbjct: 119 VKHLVYASSSSVYGL 133

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 43/134 (32%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           ILV+G +G +G  L   +LK G             L     ++        L  + GDV 
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGDVR 64

Query: 55  DYRSL--VDACFGCHVIFHTAAL--VEPWLPD-PSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D   L       G  ++FH AAL  V P + D P      NV G KNV+ AA E   VEK
Sbjct: 65  DKERLRRAFKERGPDIVFHAAALKHV-PSMEDNPEEAIKTNVLGTKNVIDAAIENG-VEK 122

Query: 110 IIYTSSFFALGSTD 123
                 F  + STD
Sbjct: 123 ------FVCI-STD 129

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 23/186 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +L+ G  GYLG RL   LL QG  V    R    ++     G   L   D+T    L D 
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLA-ADLTQPGLLADV 58

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
               H++           P    +      GL+ ++ A  +   V+++IY SS    G  
Sbjct: 59  ---DHLVISLP-------PPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ 108

Query: 123 DGYIADENQVHEEKYFCT-QYERSKAV--ADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
            G      +  +E        E  +A+  A++  L   S+   I  +    IYGPG+   
Sbjct: 109 QG------EWVDETSPPNPSTESGRALLEAEQALLALGSKPTTI--LRLAGIYGPGRHPL 160

Query: 180 GNLVAK 185
             L   
Sbjct: 161 RRLAQG 166

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M +LV GA+G LG ++    L +G+ VR LVR     S L   GA ELVYGD++   +L 
Sbjct: 1   MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGA-ELVYGDLSLPETLP 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +  G   I   A+   P   D      ++ +G   +++AAK  K +++ I+ S  
Sbjct: 60  PSFKGVTAII-DASTSRP--SDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL 111

Length = 317

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 51.0 bits (122), Expect = 9e-08
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 41/198 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGD 52
              LV+GAS  +G  +  AL ++G  V    RR+                 G    V  D
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAAD 65

Query: 53  VTDYRSLVDACF--------GCHVIFHTAALVEPWLP-------DPSRFFAVNVEGLKNV 97
           V+D    V+A             ++ + A +  P  P       D  R   VN+ G   +
Sbjct: 66  VSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLL 125

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIA 153
            +AA      ++I+  SS   LG   G  A              Y  SKA    +   +A
Sbjct: 126 TRAALPLMKKQRIVNISSVAGLGGPPGQAA--------------YAASKAALIGLTKALA 171

Query: 154 LQAASEGLPIVPVYPGVI 171
           L+ A  G+ +  V PG I
Sbjct: 172 LELAPRGIRVNAVAPGYI 189

Length = 251

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 33/172 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG----KHPTFVE 56

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +   
Sbjct: 57  GDIRN-EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI 152
            V+ +I++SS    G       D+ ++   + F T      Y +SK + ++I
Sbjct: 116 -VKNLIFSSSATVYG-------DQPKIPYVESFPTGTPQSPYGKSKLMVEQI 159

Length = 338

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++L+ G +G++G  L  ALL++G  VR   R           G ++ + GD  +   L  
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE--LPLGGVDYIKGDYENRADLES 58

Query: 62  ACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A  G   + H A+   P     +P      NV     +++A      + KII+ SS
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAG-IGKIIFASS 113

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 20/139 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRSL- 59
           +L++G S  +G  L  AL  QG+ V A  R    +  L       LE++  DVTD  S+ 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIK 62

Query: 60  -----VDACFGCH-VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KE 103
                V   FG   V+ + A            + +    F VNV G   V +A     ++
Sbjct: 63  AAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRK 122

Query: 104 TKTVEKIIYTSSFFALGST 122
             +  +I+  SS   L  T
Sbjct: 123 QGS-GRIVNVSSVAGLVPT 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 41/189 (21%), Positives = 72/189 (38%), Gaps = 37/189 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL++G +G++G  L   L K+GH V  L R        P  GA     G         D+
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS-------PPPGANTKWEGYKPWAGEDADS 53

Query: 63  CFGCHVIFHTAA---LVEPWLPD------PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             G   + + A      + W  +       SR     ++  + +V+A    +   K+  +
Sbjct: 54  LEGADAVINLAGEPIADKRWTEERKQEIRDSR-----IDTTRLLVEAIAAAEQKPKVFIS 108

Query: 114 SSFFALG----STDGYIADENQVHEEKYF---CTQYERSKAVADKIALQAASEGLPIVPV 166
           +S  A+G    S D    +E+    + +    C  +E       + A  A   G  +V +
Sbjct: 109 AS--AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWE-------EAAQAAEDLGTRVVLL 159

Query: 167 YPGVIYGPG 175
             G++ GP 
Sbjct: 160 RTGIVLGPK 168

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 47.7 bits (114), Expect = 7e-07
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GASG  G R+    LK+GH V A+VR  S ++       L+    D+ D  SL 
Sbjct: 1   MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQ---KDIFDLTSLA 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
               G   +            D     + ++E L   ++ A   +
Sbjct: 58  SDLAGHDAVISA---FGAGASDNDELHSKSIEALIEALKGAGVPR 99

Length = 211

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 21/190 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV--------RRTSDISGLPSEGALELVYGD 52
           MKILV+G +G++G      +L +      +            + ++ +        V GD
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN-LADVEDSPRYRFVQGD 59

Query: 53  VTDYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + D   +      +    + H AA   V+  +  P+ F   NV G   +++AA++     
Sbjct: 60  ICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKF 119

Query: 109 KIIYTSS---FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
           +  + S+   +  LG  D    +    +      + Y  SKA +D +      + GLP  
Sbjct: 120 RFHHISTDEVYGDLGLDDDAFTETTPYNPS----SPYSASKAASDLLVRAYVRTYGLPAT 175

Query: 165 PVYPGVIYGP 174
                  YGP
Sbjct: 176 ITRCSNNYGP 185

Length = 340

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 52/168 (30%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG---HSVRALVR---------------RTSDISGLPS 42
             +L++GA+G+LG  L   LL+       +  L+R               +        +
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 43  EGALEL-----VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA 88
              L       + GD++         D ++L++     ++I H AA V         F  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEE---VNIIIHCAATV--------TFDE 109

Query: 89  -------VNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE 129
                  +NV G   +++ AK  K ++  ++ S+ +   + D  + +E
Sbjct: 110 RLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYV--NGDRQLIEE 155

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 2  KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE 43
          KI+++G +G++G  L   L   GH V  L RR     GL   
Sbjct: 1  KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVT 54
            +LV GA+GY+G  +   L+++G++V A+ R  S I G   +          E+V+GDVT
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT 121

Query: 55  DYRSLVDACF 64
           D  SL    F
Sbjct: 122 DADSLRKVLF 131

Length = 390

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           K+LV+G +G+ G  L   LL+ G  V      + D    P+          +E  +GD+ 
Sbjct: 6   KVLVTGHTGFKGSWLSLWLLELGAEVYGY---SLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 55  DYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D   L  A   F   ++FH AA  LV     DP   F  NV G  N+++A +   +V+ +
Sbjct: 63  DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAV 122

Query: 111 I 111
           +
Sbjct: 123 V 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDYR 57
           IL++G +G  G      LL+  +  + ++      +  ++        L    GDV D  
Sbjct: 7   ILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKE 66

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            L  A  G   + H AAL  V     +P      N+ G +NV+ AA +   V++++    
Sbjct: 67  RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAID-NGVKRVV---- 121

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA 156
             AL STD      N           Y  +K  +DK+ + A
Sbjct: 122 --AL-STDKAANPIN----------LYGATKLASDKLFVAA 149

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVR---RTSDISGLPSEGALELVYGDVTDYRS 58
           +L++G +G  G  +    L      +R   R   +  D+    +   L+   GDV DYRS
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYRS 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAA 101
           +++A  G   I+H AAL +  +P     P      NV G +NV++AA
Sbjct: 67  ILNATRGVDFIYHAAALKQ--VPSCEFHPMEAVKTNVLGTENVLEAA 111

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           ++LV+G +G+ G  L   L + G  V        D    P+       +  +    GD+ 
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSL---DPPTNPNLFELANLDNKISSTRGDIR 62

Query: 55  DYRSLVDACFGCH--VIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D  +L +A       ++FH AA  LV     DP   F  NV G  N+++A +ET +V+ +
Sbjct: 63  DLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAV 122

Query: 111 IYTSS 115
           +  +S
Sbjct: 123 VNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLPSEG--ALELVY 50
           K+ L++G +G  G  L   LL++G+ V  + RR+S  +         P      L L Y
Sbjct: 2  GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHY 61

Query: 51 GDVTDYRSLV 60
          GD+TD  +L+
Sbjct: 62 GDLTDSSNLL 71

Length = 345

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 24/118 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSL 59
           ILV+GA+G LG  L   L ++G  V AL R                   D+TD     +L
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVALDRPE----------------LDLTDPEAVAAL 44

Query: 60  VDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           V       V+ + AA   V+    +P   +AVN  G  N+ +A         +I+ S+
Sbjct: 45  VRE-ARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLIHIST 99

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLPSEGA-LELVYGDVT 54
           +L++G +G LG  L   L  +G     LV R          ++ L + GA + +   DV 
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVA 62

Query: 55  DYRSL------VDACFGC-HVIFHTAALVEPWLP---DPSRF---FAVNVEGLKNVVQAA 101
           D  +L      + A  G    + H A +++        P RF    A  V G  N+ +  
Sbjct: 63  DRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHELT 122

Query: 102 KETKTVEKIIYTSS 115
           ++   +   +  SS
Sbjct: 123 RDLD-LGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 49/205 (23%), Positives = 72/205 (35%), Gaps = 59/205 (28%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G SG +GG              A+ R       L S G+ +++   V   R     
Sbjct: 1   VLVTGGSGGIGG--------------AIARW------LASRGSPKVL---VVSRRD---- 33

Query: 63  CFGCHVIFHTAALVEPWLPD------PSRFFAVNVEGLKNVVQAAKE---TKTVEKIIYT 113
                V+ H AA+++             R    NV G + +++AA+E    K + + I  
Sbjct: 34  -----VVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILI 88

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE----GLPIVPVYPG 169
           SS   L    G                 Y  SKA  D +A Q ASE    GLP   V  G
Sbjct: 89  SSVAGLF---GAPGLGG-----------YAASKAALDGLAQQWASEGWGNGLPATAVACG 134

Query: 170 VIYGPGKLTTGNLVAKLQWKKVDLV 194
              G G         ++   +   V
Sbjct: 135 TWAGSGMAKGPVAPEEILGNRRHGV 159

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           I V+GA+G  GG +   LL +G   VRA+VR     + L  +G  E+  GD      L  
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLADQGV-EVRQGDYNQPELLQK 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           A  G   +F    +  P   +        ++  KNV  AA+     + I  T   FA 
Sbjct: 60  AFAGASKLF---IITGPHYDNTLE-----IKQGKNVADAARRAGV-KHIYSTGYAFAE 108

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS 35
          IL++G +G +G  L   L K GH V  L RR  
Sbjct: 1  ILITGGTGLIGRALTARLRKGGHQVTILTRRPP 33

Length = 297

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 25/150 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVT---DYR 57
            L++G    LG  L    + +G  V  L R    ++ L ++   A+  V GDV    D  
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNE 66

Query: 58  SLVD---ACFGCHVIF--------HTAALVE-PWLPDPSRF---FAVNVEGLKNVVQAA- 101
             V      FG    F        ++ +LV+ P       F   F +NV+G     +AA 
Sbjct: 67  RAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAAL 126

Query: 102 -KETKTVEKIIYT---SSFFALGSTDGYIA 127
                T   +I+T   + F+  G    Y A
Sbjct: 127 PALYATEGSVIFTVSNAGFYPGGGGPLYTA 156

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 40/164 (24%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA G++G  L   L +Q         R SD S L                    
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDIFFYDRESDESELD------------------- 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           D   G   IFH A +  P   D + F + NV   + ++ A         I+ +SS  A  
Sbjct: 42  DFLQGADFIFHLAGVNRP--KDEAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQAAL 99

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
                                Y +SK  A+++  + A E G P+
Sbjct: 100 D------------------NPYGKSKLAAEELLQEYARETGAPV 125

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 19/124 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           + LV+GA G++G  L   L  +GH VR    ++ +    P++   E    D+ +  + + 
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTD-DDEFHLVDLREMENCLK 60

Query: 62  ACFGCHVIFHTAALVEPWLPD----------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           A  G   +FH AA       D           +     N     N+++AA+    VE+ +
Sbjct: 61  ATEGVDHVFHLAA-------DMGGMGYIQSNHAVIMYNNTLINFNMLEAARING-VERFL 112

Query: 112 YTSS 115
           + SS
Sbjct: 113 FASS 116

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTD-YRSL 59
            + V+GA+G  G R+   LL +G +V+A VR        LP + +L++V  DVT+    L
Sbjct: 19  TVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKL 78

Query: 60  VDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           V+A       +         +  DP   + V+  G  N+V+A ++   V + I  SS   
Sbjct: 79  VEAIGDDSDAVICATGFRRSF--DPFAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILV 135

Query: 119 LGSTDGYI 126
            G+  G I
Sbjct: 136 NGAAMGQI 143

Length = 251

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
          IL++G S  +G     AL   G  V A  R+  D++ L +EG LE    D  +  S+   
Sbjct: 7  ILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG-LEAFQLDYAEPESIAAL 65

Length = 277

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG---DVTDYRSL 59
            L++G S   G  L  A L  GH V   VR  +  +        +       DVTD+ ++
Sbjct: 7   WLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF-EALHPDRALARLLDVTDFDAI 65

Query: 60  ------VDACFG-CHVIF------HTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                  +A FG   V+       H  A+ E  L +  R F VNV G   + +A 
Sbjct: 66  DAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Length = 277

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 37/192 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSL 59
            L++GAS  +G     AL + G  V    RR   +  L  E   GA   +  DVTD  ++
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAV 68

Query: 60  VDAC------FG-CHVIFHTA--ALVEPW----LPDPSRFFAVNVEGLKNVVQAA----K 102
             A       FG   ++ + A  AL +P     L D  R    NV+GL N  +A      
Sbjct: 69  EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV 128

Query: 103 ETKTVEKIIYTSSFFALGSTDG---YIADENQVHEEKYFCTQYERSKAVADKIALQAASE 159
           E K+   II   S        G   Y A        K     +      +  +  + A  
Sbjct: 129 ERKSGH-IINLGSIAGRYPYPGGAVYGA-------TKAAVRAF------SLGLRQELAGT 174

Query: 160 GLPIVPVYPGVI 171
           G+ +  + PG++
Sbjct: 175 GIRVTVISPGLV 186

Length = 246

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 64/249 (25%), Positives = 95/249 (38%), Gaps = 63/249 (25%)

Query: 2    KILVSGASGYLGGRLCHALLKQGHS----VRALVRRTSDISGL-----PSEG-------- 44
             + ++GA+G+LG  +   LL +  +    V A VR  S+ +GL                 
Sbjct: 973  TVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEW 1032

Query: 45   --ALELVYGDV---------TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
               +E+V GD+           +  L +      VI H  ALV  W+   S+    NV G
Sbjct: 1033 ASRIEVVLGDLSKEKFGLSDEKWSDLTNEV---DVIIHNGALVH-WVYPYSKLRDANVIG 1088

Query: 94   LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE---------------KYF 138
              NV+    E K  ++  + SS  AL  T+ Y+   +++ +                K  
Sbjct: 1089 TINVLNLCAEGKA-KQFSFVSSTSAL-DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGL 1146

Query: 139  CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIF 198
             T Y +SK VA+ I  +A   GL    V PG + G  K    N              D F
Sbjct: 1147 GTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATN-------------TDDF 1193

Query: 199  LLERMRHSC 207
            LL RM   C
Sbjct: 1194 LL-RMLKGC 1201

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 47/205 (22%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLPSEGALELVYG 51
            +L++G S  +G  L   L+K+G +V  +V R+                 S   +  +  
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANV-IIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 52  DVTDYRS-------LVDACFGCHVIFHTAALVEPWL---PDPSRF---FAVNVEGLKNVV 98
           D++DY          V+      ++ + A +  P L        F     VN  G  NV 
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 99  QAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VAD 150
            A     KE +    I++ SS  AL    GY              + Y  SK     +A+
Sbjct: 122 HAVLPLMKEQRPG-HIVFVSSQAALVGIYGY--------------SAYCPSKFALRGLAE 166

Query: 151 KIALQAASEGLPIVPVYPGVIYGPG 175
            +  +     + +  VYP     PG
Sbjct: 167 SLRQELKPYNIRVSVVYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 38.9 bits (91), Expect = 9e-04
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 14/103 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTD---YRS 58
            LV+GAS  +G  +  AL + G+ V   +R   D++ L  S G +E V  D  D    R+
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARA 62

Query: 59  LVDA---CFG-CHVIFHTAALVEP------WLPDPSRFFAVNV 91
           LVDA    FG   V+ H A +  P         +    F++NV
Sbjct: 63  LVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINV 105

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           +IL++GA+G LG  L   L  +G  V AL R   D++    E    L+     D      
Sbjct: 1   RILITGANGQLGRELVQQLSPEGRVVVALTRSQLDLTDP--EALERLLRAIRPD------ 52

Query: 62  ACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
                  + +TAA   V+    DP + FAVN    +N+ +AA  
Sbjct: 53  ------AVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAAR 90

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDY---R 57
           + LV+GA   +G     AL K G  V A+ R  +D+  L  E   +E V  D++D+    
Sbjct: 9   RALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDWDATE 68

Query: 58  SLVDACFGCHVIFHTAALV--EPWLP----DPSRFFAVNVEGLKNVVQ 99
             + +     ++ + AA+   +P+L        R F VNV  + +V Q
Sbjct: 69  EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 20/165 (12%)

Query: 1   MKILVSGASGYLGGRLCHALL--KQGHSVRALVRRTSD------ISGLPSEGALELVYGD 52
           M+  V+G +G++G RL   LL  ++  +V  LVRR S        +   ++  + LV GD
Sbjct: 1   MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLV-GD 59

Query: 53  VTDYRSLVDACFGCHV-----IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +T+    +       +     + H AA+ +    + ++  A NV+G +NVV+ A+  +  
Sbjct: 60  LTEPGLGLSEADIAELGDIDHVVHLAAIYDLTADEEAQR-AANVDGTRNVVELAERLQAA 118

Query: 108 EKIIYTSSFFALGSTDGYIA----DENQVHEEKYFCTQYERSKAV 148
               + SS    G  +G       DE Q     Y  T++E  K V
Sbjct: 119 T-FHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLV 162

Length = 657

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 52/190 (27%), Positives = 72/190 (37%), Gaps = 40/190 (21%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KILV+G  G +G  +   L ++G+    +V RTS           EL   D+TD +  V 
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYEN--VVFRTSK----------EL---DLTD-QEAVR 44

Query: 62  ACFGCH---VIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A F       + H AA V      +  P+ F   N+    NV+ AA     V+K      
Sbjct: 45  AFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFG-VKK------ 97

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQY----ERSKAVADKIALQAASE------GLPIVP 165
              LGS+  Y     Q  +E    T          A+A K A     E      G   + 
Sbjct: 98  LVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIA-KRAGLKLCEAYRKQYGCDYIS 156

Query: 166 VYPGVIYGPG 175
           V P  +YGP 
Sbjct: 157 VMPTNLYGPH 166

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSV-------RALVRRTSDISGLPSEGALELVYGDVTD 55
          IL++GA G +G  L  A+L+ G  V        AL      +        L LV  D+TD
Sbjct: 7  ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD 66

Query: 56 YRSL 59
            SL
Sbjct: 67 QESL 70

Length = 256

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)

Query: 4  LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLPSEGALELVYGDV 53
          L++G +G  G  L   LL +G+ V  ++RR+S+          I   P++  ++L YGD+
Sbjct: 10 LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 54 TDYRSLVDAC 63
          +D  SL    
Sbjct: 70 SDASSLRRWL 79

Length = 340

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 11/68 (16%)

Query: 4  LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGL------PSEGALELVYGD 52
          L++G +G  G  L   LL++G+ V  L+RR+S      I  +       ++  ++L YGD
Sbjct: 4  LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGD 63

Query: 53 VTDYRSLV 60
          +TD  +L 
Sbjct: 64 LTDSSNLR 71

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.98
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN00198	338	anthocyanidin reductase; Provisional	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02427	386	UDP-apiose/xylose synthase	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
PLN02214	342	cinnamoyl-CoA reductase	99.96
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
PLN02572	442	UDP-sulfoquinovose synthase	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.96
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.95
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.95
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.95
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.95
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.95
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.95
PLN02260	668	probable rhamnose biosynthetic enzyme	99.95
PLN02206	442	UDP-glucuronate decarboxylase	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.94
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.94
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.94
PLN02686	367	cinnamoyl-CoA reductase	99.94
PLN02653	340	GDP-mannose 4,6-dehydratase	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.94
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.93
PRK08339	263	short chain dehydrogenase; Provisional	99.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.93
PRK07063	260	short chain dehydrogenase; Provisional	99.93
PLN02240	352	UDP-glucose 4-epimerase	99.93
PRK08265	261	short chain dehydrogenase; Provisional	99.93
PRK12747	252	short chain dehydrogenase; Provisional	99.93
PRK07985	294	oxidoreductase; Provisional	99.93
PRK06398	258	aldose dehydrogenase; Validated	99.93
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.93
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.93
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK05867	253	short chain dehydrogenase; Provisional	99.92
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.92
PRK07067	257	sorbitol dehydrogenase; Provisional	99.92
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.92
PRK06949	258	short chain dehydrogenase; Provisional	99.92
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
PRK06114	254	short chain dehydrogenase; Provisional	99.92
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.92
PRK06182	273	short chain dehydrogenase; Validated	99.92
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.92
PRK07856	252	short chain dehydrogenase; Provisional	99.92
PRK07478	254	short chain dehydrogenase; Provisional	99.92
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.92
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.92
PRK08589	272	short chain dehydrogenase; Validated	99.92
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK12742	237	oxidoreductase; Provisional	99.92
PRK07062	265	short chain dehydrogenase; Provisional	99.91
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.91
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PRK05884	223	short chain dehydrogenase; Provisional	99.91
PRK06179	270	short chain dehydrogenase; Provisional	99.91
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK06841	255	short chain dehydrogenase; Provisional	99.91
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.91
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.91
PRK08643	256	acetoin reductase; Validated	99.91
PRK06701	290	short chain dehydrogenase; Provisional	99.91
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.91
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK07831	262	short chain dehydrogenase; Provisional	99.91
PRK07201	657	short chain dehydrogenase; Provisional	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
CHL00194	317	ycf39 Ycf39; Provisional	99.91
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.91
PRK05993	277	short chain dehydrogenase; Provisional	99.91
PRK06196	315	oxidoreductase; Provisional	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK06484	520	short chain dehydrogenase; Validated	99.91
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.9
PRK09186	256	flagellin modification protein A; Provisional	99.9
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.9
PRK06101	240	short chain dehydrogenase; Provisional	99.9
PLN02778	298	3,5-epimerase/4-reductase	99.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.9
PRK07677	252	short chain dehydrogenase; Provisional	99.9
PRK08628	258	short chain dehydrogenase; Provisional	99.9
PRK07023	243	short chain dehydrogenase; Provisional	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK07791	286	short chain dehydrogenase; Provisional	99.9
PRK06940	275	short chain dehydrogenase; Provisional	99.9
PRK12743	256	oxidoreductase; Provisional	99.9
PRK05872	296	short chain dehydrogenase; Provisional	99.9
PRK07060	245	short chain dehydrogenase; Provisional	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK09242	257	tropinone reductase; Provisional	99.9
PRK06138	252	short chain dehydrogenase; Provisional	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK09135	249	pteridine reductase; Provisional	99.9
PRK05876	275	short chain dehydrogenase; Provisional	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
PRK06172	253	short chain dehydrogenase; Provisional	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PRK07814	263	short chain dehydrogenase; Provisional	99.9
PRK08263	275	short chain dehydrogenase; Provisional	99.9
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.9
PRK07775	274	short chain dehydrogenase; Provisional	99.9
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.9
KOG0725	270	consensus Reductases with broad range of substrate	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK12827	249	short chain dehydrogenase; Provisional	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.9
PRK07035	252	short chain dehydrogenase; Provisional	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06139	330	short chain dehydrogenase; Provisional	99.9
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.89
PRK06181	263	short chain dehydrogenase; Provisional	99.89
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.89
PRK07825	273	short chain dehydrogenase; Provisional	99.89
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.89
PRK12937	245	short chain dehydrogenase; Provisional	99.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK08267	260	short chain dehydrogenase; Provisional	99.89
PRK08226	263	short chain dehydrogenase; Provisional	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.89
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.89
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06057	255	short chain dehydrogenase; Provisional	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.89
PRK08303	305	short chain dehydrogenase; Provisional	99.89
PRK07109	334	short chain dehydrogenase; Provisional	99.89
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.89
PRK05650	270	short chain dehydrogenase; Provisional	99.89
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.89
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.89
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PRK08278	273	short chain dehydrogenase; Provisional	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK07576	264	short chain dehydrogenase; Provisional	99.88
PRK07832	272	short chain dehydrogenase; Provisional	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06194	287	hypothetical protein; Provisional	99.88
PRK08177	225	short chain dehydrogenase; Provisional	99.88
PRK07454	241	short chain dehydrogenase; Provisional	99.88
PRK06125	259	short chain dehydrogenase; Provisional	99.88
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.88
PRK08264	238	short chain dehydrogenase; Validated	99.88
PRK05866	293	short chain dehydrogenase; Provisional	99.88
PRK07578	199	short chain dehydrogenase; Provisional	99.88
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK05855	582	short chain dehydrogenase; Validated	99.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.88
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.88
PRK07074	257	short chain dehydrogenase; Provisional	99.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.88
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.88
PRK05599	246	hypothetical protein; Provisional	99.88
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK07069	251	short chain dehydrogenase; Validated	99.87
PRK06197	306	short chain dehydrogenase; Provisional	99.87
PRK07041	230	short chain dehydrogenase; Provisional	99.87
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK05854	313	short chain dehydrogenase; Provisional	99.87
PRK06484	520	short chain dehydrogenase; Validated	99.87
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PLN02780	320	ketoreductase/ oxidoreductase	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.87
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.87
PRK08251	248	short chain dehydrogenase; Provisional	99.87
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06198	260	short chain dehydrogenase; Provisional	99.87
PRK07326	237	short chain dehydrogenase; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.86
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.86
PRK09072	263	short chain dehydrogenase; Provisional	99.86
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.86
PRK05865	854	hypothetical protein; Provisional	99.86
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.86
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK08862	227	short chain dehydrogenase; Provisional	99.86
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK12367	245	short chain dehydrogenase; Provisional	99.86
PRK08703	239	short chain dehydrogenase; Provisional	99.86
PRK06953	222	short chain dehydrogenase; Provisional	99.86
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.86
PRK07201	657	short chain dehydrogenase; Provisional	99.85
PRK08324	681	short chain dehydrogenase; Validated	99.85
PRK08017	256	oxidoreductase; Provisional	99.85
PLN00016	378	RNA-binding protein; Provisional	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.83
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.83
PLN00015	308	protochlorophyllide reductase	99.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.82
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.82
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.82
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.81
PRK12320	699	hypothetical protein; Provisional	99.81
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.81
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.8
COG1028	251	FabG Dehydrogenases with different specificities (	99.8
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.8
KOG1208	314	consensus Dehydrogenases with different specificit	99.79
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.78
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.78
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.77
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.76
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.74
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.74
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.73
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.72
COG2910	211	Putative NADH-flavin reductase [General function p	99.7
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.67
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.66
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.64
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.63
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.53
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.52
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.48
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.39
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.32
PRK06720	169	hypothetical protein; Provisional	99.28
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.23
KOG2774	366	consensus NAD dependent epimerase [General functio	99.22
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.21
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.19
PTZ00325	321	malate dehydrogenase; Provisional	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.1
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.1
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.09
PLN00106	323	malate dehydrogenase	99.04
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	99.01
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.94
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.9
PRK09620	229	hypothetical protein; Provisional	98.88
PRK05086	312	malate dehydrogenase; Provisional	98.88
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.82
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.81
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.75
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.67
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.56
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.54
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.5
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.5
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.38
PRK14982	340	acyl-ACP reductase; Provisional	98.36
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.33
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.32
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.26
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.25
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.24
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	98.24
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.2
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.19
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.16
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	98.15
PRK05442	326	malate dehydrogenase; Provisional	98.13
PRK09496	453	trkA potassium transporter peripheral membrane com	98.11
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.11
PTZ00117	319	malate dehydrogenase; Provisional	98.08
PLN00112	444	malate dehydrogenase (NADP); Provisional	98.06
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.04
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	98.02
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	98.02
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.98
PRK06223	307	malate dehydrogenase; Reviewed	97.97
PLN02602	350	lactate dehydrogenase	97.91
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.85
COG3268	382	Uncharacterized conserved protein [Function unknow	97.81
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.79
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.79
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.78
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.77
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.77
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.77
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.74
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.7
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.67
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.63
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.63
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.58
PRK08655	437	prephenate dehydrogenase; Provisional	97.57
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.56
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.56
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.5
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.49
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.49
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.48
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.48
PRK09496	453	trkA potassium transporter peripheral membrane com	97.45
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.42
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.41
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.4
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.36
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.35
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.33
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.31
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.31
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.29
PRK10669	558	putative cation:proton antiport protein; Provision	97.29
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.27
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.26
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.25
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.21
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.21
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.2
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.2
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.18
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.18
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.14
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.13
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.13
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.11
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.08
PRK08328	231	hypothetical protein; Provisional	97.07
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.06
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.06
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.05
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.05
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.05
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.03
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.0
PRK07417	279	arogenate dehydrogenase; Reviewed	96.99
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.98
PRK08223	287	hypothetical protein; Validated	96.98
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.97
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.97
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.96
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.95
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.95
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.94
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.93
PRK04148	134	hypothetical protein; Provisional	96.92
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.92
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.92
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.91
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.88
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.88
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.87
PLN02383	344	aspartate semialdehyde dehydrogenase	96.84
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.84
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.83
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.81
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.78
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.77
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.75
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.73
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.69
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.68
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.67
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.67
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.65
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.65
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.59
PRK07411	390	hypothetical protein; Validated	96.59
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.57
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.57
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.54
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.53
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.51
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.51
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.51
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.48
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.47
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.47
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.45
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.45
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.44
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.43
PRK07877	722	hypothetical protein; Provisional	96.42
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.41
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.39
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.37
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.35
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.33
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.28
PRK10537	393	voltage-gated potassium channel; Provisional	96.27
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.27
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.25
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.21
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.2
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.17
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	96.17
PRK06444	197	prephenate dehydrogenase; Provisional	96.16
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.16
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.15
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.15
PRK07574	385	formate dehydrogenase; Provisional	96.15
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.14
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.13
PRK08818	370	prephenate dehydrogenase; Provisional	96.13
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.12
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.12
PLN02688	266	pyrroline-5-carboxylate reductase	96.11
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.11
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.1
PLN00203	519	glutamyl-tRNA reductase	96.09
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.09
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	96.06
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.05
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.0
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.98
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.97
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.95
PRK12480	330	D-lactate dehydrogenase; Provisional	95.94
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.93
PRK06849	389	hypothetical protein; Provisional	95.9
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.88
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.86
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.85
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	95.81
PLN02928	347	oxidoreductase family protein	95.79
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.78
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.75
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.74
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.73
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.73
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.71
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.69
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.69
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.68
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.67
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	95.66
PRK00711	416	D-amino acid dehydrogenase small subunit; Validate	95.66

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-31  Score=212.27  Aligned_cols=170  Identities=27%  Similarity=0.360  Sum_probs=146.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc--
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL--   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~--   75 (229)
                      |+||||||+|+||++.+.+|++.|++|+++|.-.. ..+.+... ..+++++|+.|.+-+.++++  ++|.|||.||.  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~   79 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-QFKFYEGDLLDRALLTAVFEENKIDAVVHFAASIS   79 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-cCceEEeccccHHHHHHHHHhcCCCEEEECccccc
Confidence            89999999999999999999999999999998432 22222211 15899999999999999987  59999999997  


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                      ++.+.++|.++++.|+.+|.+|++++.+++ +++|||.||+++||.+...+.+|+.+..|   .++||.||.+.|.+.+.
T Consensus        80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p---~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          80 VGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAP---INPYGRSKLMSEEILRD  155 (329)
T ss_pred             cchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCC---CCcchhHHHHHHHHHHH
Confidence            556778899999999999999999999996 89999999999999988777777776654   57899999999999999


Q ss_pred             HHh-cCCCeEEEecCceecCC
Q 027007          156 AAS-EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       156 ~~~-~gi~~~~irpg~i~g~~  175 (229)
                      +.. ++++.+++|.+++-|..
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~  176 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGAC  176 (329)
T ss_pred             HHHhCCCcEEEEEecccccCC
Confidence            874 58999999999998853

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.98  E-value=3.3e-31  Score=216.39  Aligned_cols=175  Identities=38%  Similarity=0.576  Sum_probs=140.2

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            4 LVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         4 lItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      |||||+||||++|+++|+++|  ++|.++++.+....  ........+++++|++|++++.++++++|+|||+|++.+..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  79999998764322  22222234489999999999999999999999999986554


Q ss_pred             C-CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC--CCcc--cCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           80 L-PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST--DGYI--ADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        80 ~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~--~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      . ...++++++|+.||.+++++|.+.+ ++++||+||..++++.  ..+.  .+|..+.+. .+...|+.||+++|++++
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~-~~~~~Y~~SK~~AE~~V~  158 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS-SPLDPYAESKALAEKAVL  158 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccc-cccCchHHHHHHHHHHHH
Confidence            3 4566799999999999999999884 8999999999988861  1222  244444332 355679999999999999


Q ss_pred             HHHh------cCCCeEEEecCceecCCCCchh
Q 027007          155 QAAS------EGLPIVPVYPGVIYGPGKLTTG  180 (229)
Q Consensus       155 ~~~~------~gi~~~~irpg~i~g~~~~~~~  180 (229)
                      +...      ..+++++|||..||||++....
T Consensus       159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~  190 (280)
T PF01073_consen  159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLV  190 (280)
T ss_pred             hhcccccccccceeEEEEeccEEeCccccccc
Confidence            9765      2489999999999999875433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.97  E-value=5.2e-30  Score=215.99  Aligned_cols=173  Identities=21%  Similarity=0.297  Sum_probs=139.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC------CCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP------SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||||||||||||++|+++|+++|++|++++|.......    ..      ...+++++.+|++|.+++.++++++|+||
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~Vi   95 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVL   95 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEEE
Confidence            689999999999999999999999999999986432111    10      01357889999999999999999999999


Q ss_pred             EeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      |+|+....  ...++.+.+++|+.+|.+++++|++.+ .+++||+||+.+|+.....+..|+.+..   +.+.|+.+|.+
T Consensus        96 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~---p~~~Y~~sK~~  171 (348)
T PRK15181         96 HQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGR---PLSPYAVTKYV  171 (348)
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCC---CCChhhHHHHH
Confidence            99986432  334667889999999999999999874 6799999999999865433333333222   24679999999


Q ss_pred             HHHHHHHHH-hcCCCeEEEecCceecCCCC
Q 027007          149 ADKIALQAA-SEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       149 ~e~~~~~~~-~~gi~~~~irpg~i~g~~~~  177 (229)
                      +|.+++.+. .++++++++||+++|||+..
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~  201 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFGRRQN  201 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeCcCCC
Confidence            999998876 45899999999999999753

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=2.7e-30  Score=209.73  Aligned_cols=178  Identities=37%  Similarity=0.568  Sum_probs=148.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC------CCCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~------~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|+||||+||||++|+++|+.+||.|.++.|++++      +.+++.. .+.+.+.+|++|++++.++++++|+|+|+|
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~A   86 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTA   86 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeC
Confidence            589999999999999999999999999999999876      2233322 358899999999999999999999999999


Q ss_pred             cccCCCCCCch-hhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-----CCcccCCCCccccccc---cCcHHH
Q 027007           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF---CTQYER  144 (229)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~~~~~~~~~~~~---~~~Y~~  144 (229)
                      ++++....+++ +.++..+.||.+++++|++...++|+|++||.++....     .....+|+.+.++...   ..-|..
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            99876555555 79999999999999999998768999999998776533     2345666665443221   124999


Q ss_pred             HHHHHHHHHHHHHhc-CCCeEEEecCceecCCCCc
Q 027007          145 SKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       145 sK~~~e~~~~~~~~~-gi~~~~irpg~i~g~~~~~  178 (229)
                      +|.++|..+++++.. +++.+.+.|+.|+||.-.+
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence            999999999999865 7999999999999997655

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=4.4e-30  Score=203.05  Aligned_cols=182  Identities=23%  Similarity=0.287  Sum_probs=148.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcC-----CCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRR-----TSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~   71 (229)
                      |++|||||+||||++.++.++++.  .+|+.++.=     .+.+..+...++..++++|++|.+.+.++++  ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            899999999999999999999885  457777762     1223334455689999999999999999998  5999999


Q ss_pred             eCcc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC--cccCCCCccccccccCcHHHHHH
Q 027007           72 TAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        72 ~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      .|+-  ++.+..+++.++++|+.||.+|+++++++...-||+|+||.-+||....  ...+|+++..|   +++|++||+
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~P---sSPYSASKA  157 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNP---SSPYSASKA  157 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCC---CCCcchhhh
Confidence            9986  5667788999999999999999999999864359999999999997543  23445555544   577999999


Q ss_pred             HHHHHHHHHHh-cCCCeEEEecCceecCCCCchhHHHHHH
Q 027007          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKL  186 (229)
Q Consensus       148 ~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~~~~~~~~  186 (229)
                      .+..+++.+.+ +|+++++.|+++-|||.+.+ ..+++.+
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfp-EKlIP~~  196 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-EKLIPLM  196 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-hhhhHHH
Confidence            99999999974 69999999999999999855 2344443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=1.3e-28  Score=207.45  Aligned_cols=174  Identities=22%  Similarity=0.330  Sum_probs=138.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCC-ChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++|+++|+++ |++|++++|+..+...+.....++++.+|++ +.+.+.++++++|+|||+|+...+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~   81 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP   81 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence            68999999999999999999986 6999999987544333322346889999998 677888888899999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCC-Ccc---ccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADEN-QVH---EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~-~~~---~~~~~~~~Y~~sK~~~e~~  152 (229)
                        ...++...+++|+.++.+++++|.+.+  +++||+||..+|+.....+.+|+ .+.   +...+.+.|+.+|.++|.+
T Consensus        82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         82 ATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             HHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence              345677889999999999999998874  69999999999986443233332 221   1122346799999999999


Q ss_pred             HHHHH-hcCCCeEEEecCceecCCC
Q 027007          153 ALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      ++.+. .++++++++||+.+|||+.
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGL  184 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCc
Confidence            99886 4699999999999999974

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=1.7e-28  Score=204.91  Aligned_cols=178  Identities=27%  Similarity=0.359  Sum_probs=140.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------CC-CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PS-EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |++|||||+||||++++++|+++|++|++++|+....+..      .. ..+++++.+|++|.+++.++++++|+|||+|
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   85 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTA   85 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEeC
Confidence            5799999999999999999999999999998876543221      01 1367889999999999999999999999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-----CcccCCCCccccc---cccCcHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-----GYIADENQVHEEK---YFCTQYE  143 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~~~~~~~~~~~~---~~~~~Y~  143 (229)
                      +....  ...++.+.+++|+.++.++++++.+.+..++||++||..+|+...     ..+.+|+.+..+.   .+.+.|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            96422  234567889999999999999998865457999999988775432     2234555443321   1235699


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCCc
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      .||.++|.+++.+.+ +|++++++||+++|||+...
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~  201 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQP  201 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCC
Confidence            999999999998865 48999999999999998643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.96  E-value=1.9e-28  Score=205.69  Aligned_cols=176  Identities=30%  Similarity=0.453  Sum_probs=137.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC------CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++|++|+++.|+.+...      .+...+.++++.+|++|.+++.++++++|+|||+|+
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   89 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVAT   89 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeCC
Confidence            57999999999999999999999999999988764321      121113578899999999999999999999999999


Q ss_pred             ccCCCCCCch-hhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC----CcccCCCCcc------ccccccCcHH
Q 027007           75 LVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH------EEKYFCTQYE  143 (229)
Q Consensus        75 ~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~~~~~~~------~~~~~~~~Y~  143 (229)
                      .......++. ..+++|+.++.++++++.+....++||++||..+|+...    ..+.+|..+.      .+..+.++|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~  169 (338)
T PLN00198         90 PVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYP  169 (338)
T ss_pred             CCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhH
Confidence            6443323333 467999999999999998864467999999999998532    2223333211      1122456799


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      .||.++|.+++.+.+ +|++++++||+++|||+.
T Consensus       170 ~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence            999999999999875 599999999999999975

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.6e-28  Score=203.34  Aligned_cols=177  Identities=28%  Similarity=0.409  Sum_probs=137.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC------CC-CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|++++|+......      .. ....++++++|++|++++.++++++|+|||+|
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   84 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTA   84 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeC
Confidence            589999999999999999999999999999997653211      11 11367899999999999999999999999999


Q ss_pred             cccCCCCCCch-hhhHhhHHHHHHHHHHHHhcCCCceEEEEcccee--eecCC---CcccCCCCccccc---cccCcHHH
Q 027007           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA--LGSTD---GYIADENQVHEEK---YFCTQYER  144 (229)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~--~~~~~---~~~~~~~~~~~~~---~~~~~Y~~  144 (229)
                      +.......++. +.+++|+.++.++++++.+....++||++||..+  |+..+   ..+.+|+.+..+.   ...+.|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            97543334444 6889999999999999988744679999999763  54321   2234444332221   11246999


Q ss_pred             HHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       145 sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +|.++|.+++.+.+ ++++++++||+.+|||+..
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCC
Confidence            99999999998864 5999999999999999753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=3.2e-28  Score=203.00  Aligned_cols=177  Identities=32%  Similarity=0.431  Sum_probs=137.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC---C---C-CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---L---P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~---~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ++||||||+||||++++++|+++|++|+++.|+..+.+.   +   . ....++++.+|++|++++.++++++|+|||+|
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A   85 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTA   85 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEeC
Confidence            479999999999999999999999999999997654221   1   0 11368899999999999999999999999999


Q ss_pred             cccCCCCCCc-hhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee--cC---CCcccCCCCccccc---cccCcHHH
Q 027007           74 ALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG--ST---DGYIADENQVHEEK---YFCTQYER  144 (229)
Q Consensus        74 ~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~--~~---~~~~~~~~~~~~~~---~~~~~Y~~  144 (229)
                      +.......++ .+.+++|+.++.++++++.+....+|||++||..++.  ..   .+...+|+.+..+.   .+.+.|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            9754332333 3578999999999999998764467999999987643  21   12234444432221   23467999


Q ss_pred             HHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       145 sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ||.++|.+++++.+ ++++++++||+.+|||+..
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCC
Confidence            99999999999864 5999999999999999754

>PLN02427 UDP-apiose/xylose synthase

Probab=99.96  E-value=1.7e-28  Score=209.60  Aligned_cols=174  Identities=21%  Similarity=0.279  Sum_probs=136.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||||||||||||++++++|+++ |++|++++|+.++...+..      ..+++++.+|++|.+++.++++++|+|||+|
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA   94 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA   94 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence            79999999999999999999998 5999999987654332211      1368999999999999999999999999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc------------------
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH------------------  133 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~------------------  133 (229)
                      +....  +..++.+.+..|+.++.+++++|.+..  ++|||+||..+|+...+...+|..+.                  
T Consensus        95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~  172 (386)
T PLN02427         95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIF  172 (386)
T ss_pred             cccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccccc
Confidence            86432  223455678899999999999998764  69999999999986432222222111                  


Q ss_pred             -ccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          134 -EEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       134 -~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                       +...+.+.|+.+|.++|.+++.+.+ ++++++++||+++|||+.
T Consensus       173 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  217 (386)
T PLN02427        173 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM  217 (386)
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence             0011235799999999999998764 589999999999999974

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=6.2e-28  Score=203.61  Aligned_cols=176  Identities=31%  Similarity=0.450  Sum_probs=137.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------C-CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ++||||||+||||++++++|+++|++|++++|+.+....+      . ....++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A   85 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVA   85 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeC
Confidence            4899999999999999999999999999999976543221      1 11257889999999999999999999999999


Q ss_pred             cccCCCCCCc-hhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC--cccCCCCcc------ccccccCcHHH
Q 027007           74 ALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVH------EEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~--~~~~~~~~~------~~~~~~~~Y~~  144 (229)
                      +.......++ .+.+++|+.++.++++++.+.+..++|||+||..+|+....  +..+|..+.      .+..+.++|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            8754322233 46899999999999999998754679999999877654321  222343221      11112357999


Q ss_pred             HHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ||.++|.+++.+.+ +|++++++||+++|||+.
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI  198 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence            99999999999874 599999999999999975

>PLN02214 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.2e-27  Score=201.28  Aligned_cols=173  Identities=32%  Similarity=0.465  Sum_probs=138.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCCC-CCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++..     .+.. ...++++.+|++|.+++.++++++|+|||+|+
T Consensus        11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~   90 (342)
T PLN02214         11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHTAS   90 (342)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEecC
Confidence            47999999999999999999999999999999765321     1111 12578899999999999999999999999998


Q ss_pred             ccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc-eeeecCCC---cccCCCCccc---cccccCcHHHHHH
Q 027007           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGSTDG---YIADENQVHE---EKYFCTQYERSKA  147 (229)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~-~~~~~~~~---~~~~~~~~~~---~~~~~~~Y~~sK~  147 (229)
                      ..   ..++.+.+++|+.++.+++++|.+.+ .++||++||. +.|+....   ...+|+.+.+   +..+.+.|+.+|.
T Consensus        91 ~~---~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         91 PV---TDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM  166 (342)
T ss_pred             CC---CCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence            64   24577889999999999999999875 6799999996 57764321   2345553221   1123467999999


Q ss_pred             HHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       148 ~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ++|.+++.+.+ +|++++++||+++|||+..
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            99999999864 5999999999999999753

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.96  E-value=7.9e-28  Score=217.74  Aligned_cols=174  Identities=22%  Similarity=0.333  Sum_probs=139.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhh-HHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+|||||||||||++++++|+++ |++|++++|............+++++.+|++|.++ +.++++++|+|||+|+....
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~  395 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATP  395 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccCc
Confidence            78999999999999999999986 79999999976543322223468899999999766 56778899999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc----ccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~sK~~~e~~  152 (229)
                        ...++.+.+++|+.++.+++++|.+++  +++||+||.++|+.....+.+|+.+.    +...+.+.|+.||.++|.+
T Consensus       396 ~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~  473 (660)
T PRK08125        396 IEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRV  473 (660)
T ss_pred             hhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHH
Confidence              334567789999999999999999874  69999999999986544445554432    1112345799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ++.+.+ +|++++++||+++|||++
T Consensus       474 ~~~~~~~~g~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        474 IWAYGEKEGLRFTLFRPFNWMGPRL  498 (660)
T ss_pred             HHHHHHhcCCceEEEEEceeeCCCc
Confidence            999874 599999999999999975

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.96  E-value=1.2e-27  Score=201.75  Aligned_cols=173  Identities=25%  Similarity=0.312  Sum_probs=136.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++|++|++++|+.......    .....++++.+|++|.+++.++++.  +|+|||+|+
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~   84 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAA   84 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECCc
Confidence            6899999999999999999999999999999976543221    1112567889999999999998874  699999998


Q ss_pred             ccC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-cccCCCCccccccccCcHHHHHHHHHH
Q 027007           75 LVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        75 ~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      ...  .+..++...+++|+.++.++++++.+....+++|++||..+|+.... .+.+|..+..   +.+.|+.+|.++|.
T Consensus        85 ~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~---p~~~Y~~sK~~~e~  161 (349)
T TIGR02622        85 QPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG---GHDPYSSSKACAEL  161 (349)
T ss_pred             ccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCC---CCCcchhHHHHHHH
Confidence            532  23456778999999999999999987643579999999999975421 1233333222   24679999999999


Q ss_pred             HHHHHHh--------cCCCeEEEecCceecCCC
Q 027007          152 IALQAAS--------EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       152 ~~~~~~~--------~gi~~~~irpg~i~g~~~  176 (229)
                      +++.++.        ++++++++||+++|||+.
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~  194 (349)
T TIGR02622       162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGD  194 (349)
T ss_pred             HHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence            9887753        389999999999999975

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=2.8e-27  Score=197.36  Aligned_cols=175  Identities=44%  Similarity=0.694  Sum_probs=144.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+|+||||+||||++++++|+++|++|++++|++++...+.. ..++++++|++|.+++.++++++|+|||+|+..+.+.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            899999999999999999999999999999998765433322 2678899999999999999999999999998655455


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-CCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh-
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-  158 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-  158 (229)
                      .++...+++|+.++.++++++.+.+ .+++|++||..+|+.. .+.+.+|+.+..+....+.|+.+|.++|.+++++.. 
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  158 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE  158 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence            6678889999999999999998874 6799999999999852 233445554443333345799999999999999875 


Q ss_pred             cCCCeEEEecCceecCCCC
Q 027007          159 EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~~~  177 (229)
                      .+++++++||+.+|||+..
T Consensus       159 ~~~~~~ilR~~~~~G~~~~  177 (328)
T TIGR03466       159 KGLPVVIVNPSTPIGPRDI  177 (328)
T ss_pred             cCCCEEEEeCCccCCCCCC
Confidence            4899999999999999753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.96  E-value=1.2e-27  Score=207.06  Aligned_cols=176  Identities=22%  Similarity=0.219  Sum_probs=132.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-------CCCCC---------------CCCCeEEEEccCCChhh
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLP---------------SEGALELVYGDVTDYRS   58 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-------~~~~~---------------~~~~~~~~~~D~~~~~~   58 (229)
                      |+||||||+||||++|+++|+++|++|++++|...+       .+...               ...+++++.+|++|.++
T Consensus        48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~  127 (442)
T PLN02572         48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEF  127 (442)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHH
Confidence            689999999999999999999999999998753211       00000               01257899999999999


Q ss_pred             HHhhcC--CccEEEEeCcccCC--CCC---CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCC--
Q 027007           59 LVDACF--GCHVIFHTAALVEP--WLP---DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE--  129 (229)
Q Consensus        59 ~~~~~~--~~d~vi~~a~~~~~--~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~--  129 (229)
                      +.++++  ++|+|||+|+....  ...   ++...+++|+.++.+++++|++.+..+++|++||..+||....+ .+|  
T Consensus       128 v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~-~~E~~  206 (442)
T PLN02572        128 LSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNID-IEEGY  206 (442)
T ss_pred             HHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCC-Ccccc
Confidence            999887  48999999976322  111   23456789999999999999988533499999999999864321 111  


Q ss_pred             ---------CCccccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          130 ---------NQVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       130 ---------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                               +.++.+..+.+.|+.||.++|.+++.+.+ +|++++++||+++|||++.
T Consensus       207 i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~  264 (442)
T PLN02572        207 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTD  264 (442)
T ss_pred             cccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCc
Confidence                     11111223456799999999999988864 5999999999999999853

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=4.2e-28  Score=204.83  Aligned_cols=177  Identities=28%  Similarity=0.398  Sum_probs=136.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |+||||||+||||++++++|+++|++|++++|+..+.+.    ......++++.+|++|.+++.++++++|+|||+|+..
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~   90 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAASM   90 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCccc
Confidence            799999999999999999999999999999987543221    1112368899999999999999999999999999974


Q ss_pred             CCC----CCCchhh-----hHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC--C---cccCCCCccc------cc
Q 027007           77 EPW----LPDPSRF-----FAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--G---YIADENQVHE------EK  136 (229)
Q Consensus        77 ~~~----~~~~~~~-----~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~--~---~~~~~~~~~~------~~  136 (229)
                      ...    ..++...     ++.|+.++.+++++|.+.+..++||++||..+|+...  +   .+.+|+.+.+      +.
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~  170 (353)
T PLN02896         91 EFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTK  170 (353)
T ss_pred             cCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccC
Confidence            321    2234433     4555799999999998875467999999999998532  1   2344442211      11


Q ss_pred             cccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          137 YFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .+.++|+.||.++|.+++.+++ ++++++++||+++|||+..
T Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        171 ASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcC
Confidence            2335799999999999999875 5999999999999999753

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.96  E-value=4.9e-27  Score=199.34  Aligned_cols=173  Identities=18%  Similarity=0.170  Sum_probs=134.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC--
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (229)
                      |+|||||||||||++++++|.++|++|++++|.......... ...+++.+|++|.+.+.++++++|+|||+|+....  
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~  100 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDM-FCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMG  100 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccc-ccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCcc
Confidence            799999999999999999999999999999986432111100 13567889999999998888899999999986431  


Q ss_pred             -CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc----ccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY----IADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                       ...++...++.|+.++.+++++|+... .++|||+||..+|+.....    ...|+... +..+.+.|+.+|..+|.++
T Consensus       101 ~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~-p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695        101 FIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAW-PAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCC-CCCCCCHHHHHHHHHHHHH
Confidence             223455678899999999999998874 6899999999999864321    12222211 1123467999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +.+.. .|++++++||+++|||+.
T Consensus       179 ~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             HHHHHHhCCCEEEEEECCccCCCC
Confidence            98764 499999999999999975

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.96  E-value=4.5e-27  Score=198.58  Aligned_cols=174  Identities=20%  Similarity=0.265  Sum_probs=133.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCCCC--CC---CCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSD--IS---GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~-~~r~~~~--~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~   72 (229)
                      |+|||||||||||++++++|+++|+++++ ++|....  ..   .+.....++++++|++|.+++.+++++  +|+|||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            38999999999999999999999987554 4443221  11   111123577889999999999998874  8999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhc--------CCCceEEEEccceeeecCC--CcccCCCCccccccccC
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET--------KTVEKIIYTSSFFALGSTD--GYIADENQVHEEKYFCT  140 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~iv~~sS~~~~~~~~--~~~~~~~~~~~~~~~~~  140 (229)
                      ||....  ..+++++.+++|+.++.+++++|.+.        ...+++|++||..+|+...  ..+.+|..+..   +.+
T Consensus        82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~---p~s  158 (355)
T PRK10217         82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA---PSS  158 (355)
T ss_pred             CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC---CCC
Confidence            997533  23456789999999999999999864        1246999999999998532  22344443332   246


Q ss_pred             cHHHHHHHHHHHHHHHH-hcCCCeEEEecCceecCCCC
Q 027007          141 QYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~-~~gi~~~~irpg~i~g~~~~  177 (229)
                      .|+.||..+|.+++.++ +++++++++||+.+|||+..
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~  196 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF  196 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence            79999999999999886 45999999999999999863

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=1.8e-27  Score=196.56  Aligned_cols=155  Identities=19%  Similarity=0.206  Sum_probs=127.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      ||||||||+||||++++++|+++| +|++++|...            .+.+|++|++.+.++++  ++|+|||+|+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            899999999999999999999999 7988887531            24679999999999887  58999999997533


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..+++..+++|+.++.+|+++|.+.+  .++||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.+
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~p~~E~~~~~---P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDIPWQETDATA---PLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCCCcCCCCCCC---CCCHHHHHHHHHHHHHHHh
Confidence              345667778999999999999999885  389999999999876544555554433   2467999999999998876


Q ss_pred             HhcCCCeEEEecCceecCCC
Q 027007          157 ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..   +.+++||+++|||++
T Consensus       143 ~~---~~~ilR~~~vyGp~~  159 (299)
T PRK09987        143 CA---KHLIFRTSWVYAGKG  159 (299)
T ss_pred             CC---CEEEEecceecCCCC
Confidence            43   579999999999975

>PLN02583 cinnamoyl-CoA reductase

Probab=99.95  E-value=7.4e-27  Score=192.79  Aligned_cols=177  Identities=29%  Similarity=0.412  Sum_probs=136.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC------CCCC-CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI------SGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~------~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ++||||||+||||++++++|+++|++|+++.|+.++.      ..+. ...+++++++|++|.+++.+++.++|.|+|.+
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~   86 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCCF   86 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEeC
Confidence            3699999999999999999999999999999864221      1121 12367889999999999999999999999988


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-----CCcccCCCCccccc---cccCcHHHH
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEK---YFCTQYERS  145 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~~~~~~~~~~---~~~~~Y~~s  145 (229)
                      +.......++++.+++|+.++.++++++.+.+..+|||++||..++...     ...+.+|+.+.++.   .....|+.|
T Consensus        87 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  166 (297)
T PLN02583         87 DPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALA  166 (297)
T ss_pred             ccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHH
Confidence            6543222346788999999999999999887546899999998765321     11234444332211   112259999


Q ss_pred             HHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       146 K~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      |.++|.+++.+.+ +|++++++||+++|||+..
T Consensus       167 K~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        167 KTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence            9999999998864 5999999999999999753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.95  E-value=6e-28  Score=192.31  Aligned_cols=169  Identities=34%  Similarity=0.513  Sum_probs=138.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccC--C
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE--P   78 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~--~   78 (229)
                      ||||||+||||++++++|+++|++|+.+.|+............++++.+|+.|.+++.++++.  +|+|||+|+...  .
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            799999999999999999999999999988765432111111688999999999999999885  599999998742  1


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      +..+....++.|+.++.++++++.+.. .+++|++||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+.+
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~---~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINP---LSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCH---SSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence            224567889999999999999999986 48999999999999875555555554432   45699999999999998875


Q ss_pred             -cCCCeEEEecCceecCC
Q 027007          159 -EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       159 -~gi~~~~irpg~i~g~~  175 (229)
                       ++++++++||+.+|||.
T Consensus       157 ~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHTSEEEEEEESEEESTT
T ss_pred             cccccccccccccccccc
Confidence             48999999999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.95  E-value=8.2e-27  Score=193.32  Aligned_cols=172  Identities=32%  Similarity=0.475  Sum_probs=139.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCc-cEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGC-HVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-d~vi~~a~~~~~~   79 (229)
                      |+||||||+||||++++++|+++|++|++++|.........  ..+.++.+|++|.+...++.+.. |+|||+|+.....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~   78 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVP   78 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchh
Confidence            78999999999999999999999999999999876544433  36788999999998888888877 9999999975432


Q ss_pred             CC---CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-CCcccCCCC-ccccccccCcHHHHHHHHHHHHH
Q 027007           80 LP---DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQ-VHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        80 ~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~~~~~~-~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      ..   ++.+++++|+.++.++++++.+. ..+++||.||.++++.. .....+|+. +..   +.+.|+.+|.++|.+++
T Consensus        79 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~---p~~~Yg~sK~~~E~~~~  154 (314)
T COG0451          79 DSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPLPIDEDLGPPR---PLNPYGVSKLAAEQLLR  154 (314)
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCCCcccccCCCC---CCCHHHHHHHHHHHHHH
Confidence            22   34568999999999999999985 47899998887777754 333455552 222   22379999999999999


Q ss_pred             HHHh-cCCCeEEEecCceecCCCCc
Q 027007          155 QAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       155 ~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      .+.. +|++++++||+.+|||+...
T Consensus       155 ~~~~~~~~~~~ilR~~~vyGp~~~~  179 (314)
T COG0451         155 AYARLYGLPVVILRPFNVYGPGDKP  179 (314)
T ss_pred             HHHHHhCCCeEEEeeeeeeCCCCCC
Confidence            9875 58999999999999998654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.95  E-value=7.6e-27  Score=201.38  Aligned_cols=169  Identities=22%  Similarity=0.296  Sum_probs=131.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CC---CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS---GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ||||||||+||||++|+++|+++|++|++++|.... .+   .+.....++++.+|+.+.     .+.++|+|||+|+..
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~  195 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  195 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECceec
Confidence            899999999999999999999999999999985321 11   111123677888898765     245799999999864


Q ss_pred             CC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCc--cccccccCcHHHHHHHHHHH
Q 027007           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~--~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ..  ...++.+.+++|+.++.+++++|.+.+  .++|++||..+|+.....+.+|+..  ..+..+.+.|+.+|..+|.+
T Consensus       196 ~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~  273 (436)
T PLN02166        196 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  273 (436)
T ss_pred             cchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence            32  234567889999999999999999875  3899999999998754444444421  11222346799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ++.+.+ ++++++++||+++|||+.
T Consensus       274 ~~~y~~~~~l~~~ilR~~~vYGp~~  298 (436)
T PLN02166        274 AMDYHRGAGVEVRIARIFNTYGPRM  298 (436)
T ss_pred             HHHHHHHhCCCeEEEEEccccCCCC
Confidence            998864 489999999999999974

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.95  E-value=2.4e-26  Score=193.40  Aligned_cols=173  Identities=23%  Similarity=0.217  Sum_probs=137.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCCC------CCCeEEEEccCCChhhHHhhcCC--cc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS------EGALELVYGDVTDYRSLVDACFG--CH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~--~d   67 (229)
                      |+||||||+||||++++++|+++|++|++++|+.+.     ...+..      ...++++++|++|.+++.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999997542     111110      13578999999999999998884  69


Q ss_pred             EEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCC--ceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      +|||+|+....  ..+++...+++|+.++.+++++|.+.+..  .++||+||..+||.....+.+|+.+..   +.+.|+
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~---p~~~Y~  157 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFY---PRSPYA  157 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC---CCChhH
Confidence            99999997432  22345677899999999999999886422  389999999999865443455554433   246799


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      .||..+|.+++.+++ ++++++..|+.++|||+.
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  191 (343)
T TIGR01472       158 AAKLYAHWITVNYREAYGLFAVNGILFNHESPRR  191 (343)
T ss_pred             HHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence            999999999998875 489999999999999964

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.95  E-value=1.8e-26  Score=194.63  Aligned_cols=174  Identities=21%  Similarity=0.269  Sum_probs=132.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCC--C---CCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTS--D---ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~--~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      ||||||||+||||++++++|+++|++ |+++++...  .   ...+.....++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            89999999999999999999999976 555554321  1   1111112357789999999999999886  48999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcC--------CCceEEEEccceeeecCCC----------cccCCCCc
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALGSTDG----------YIADENQV  132 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~~sS~~~~~~~~~----------~~~~~~~~  132 (229)
                      |+....  ...++++.+++|+.++.+++++|.+++        ..+++|++||..+|+....          ++.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            997432  234567899999999999999998752        2458999999999985321          12233332


Q ss_pred             cccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          133 HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .   .+.+.|+.+|..+|.+++.+++ +|++++++||+.+|||+..
T Consensus       161 ~---~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~  203 (352)
T PRK10084        161 Y---APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF  203 (352)
T ss_pred             C---CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC
Confidence            2   2346799999999999998864 5899999999999999853

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=3.3e-26  Score=191.11  Aligned_cols=159  Identities=25%  Similarity=0.312  Sum_probs=128.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCC---CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+||||||+||||++++++|+++|  ++|++++|+..+...+   .....++++++|++|.+++.++++++|+|||+||.
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~   84 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAAL   84 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECccc
Confidence            579999999999999999999986  7899999875432111   11136889999999999999999999999999997


Q ss_pred             cC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           76 VE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        76 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      ..  ....++.+.+++|+.++.++++++.+.+ .++||++||...+.                 +.+.|+.+|..+|.++
T Consensus        85 ~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~~-----------------p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        85 KQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAAN-----------------PINLYGATKLASDKLF  146 (324)
T ss_pred             CCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCCC-----------------CCCHHHHHHHHHHHHH
Confidence            42  2234566899999999999999999874 67999999864221                 1245999999999998


Q ss_pred             HHHH----hcCCCeEEEecCceecCCCC
Q 027007          154 LQAA----SEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~----~~gi~~~~irpg~i~g~~~~  177 (229)
                      +.++    .+|++++++|||++|||+..
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~~  174 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRGS  174 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCCC
Confidence            7653    45899999999999999753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.95  E-value=3.6e-27  Score=183.07  Aligned_cols=195  Identities=23%  Similarity=0.194  Sum_probs=143.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC---CCeEEEEccCCChhhHHhhc-------CCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDAC-------FGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~   71 (229)
                      .++|||||++||.++++.|++.|++|++..|+.++++++..+   ..+..+..|++|.+++++++       .++|++||
T Consensus         8 v~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvN   87 (246)
T COG4221           8 VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVN   87 (246)
T ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEe
Confidence            479999999999999999999999999999999887766443   25788999999998865554       35999999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      ..++|+.++++|+.|..+..+++.+.+.   .++||++||.++.-+.++.              +.|
T Consensus        88 NAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~--------------~vY  153 (246)
T COG4221          88 NAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG--------------AVY  153 (246)
T ss_pred             cCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC--------------ccc
Confidence            9997322      3357999999999999999999998762   3499999999866554443              449


Q ss_pred             HHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCC-chhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKL-TTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.+|++..    .+.+++..+++|++.|.||.+-+..-. .....-.....+.. .-.....+++++.+..|.-
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y-~~~~~l~p~dIA~~V~~~~  226 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY-KGGTALTPEDIAEAVLFAA  226 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh-ccCCCCCHHHHHHHHHHHH
Confidence            99999554    444555567999999999999554211 11110111111100 1133567888887776654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.95  E-value=4.4e-26  Score=207.04  Aligned_cols=174  Identities=23%  Similarity=0.343  Sum_probs=135.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCC--CCCCCC---CCCCCeEEEEccCCChhhHHhhc--CCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT--SDISGL---PSEGALELVYGDVTDYRSLVDAC--FGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~--~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi~   71 (229)
                      |+|||||||||||++++++|+++  +++|++++|..  ++...+   ....+++++.+|++|.+.+.+++  .++|+|||
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViH   86 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIMH   86 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEEE
Confidence            78999999999999999999998  68999998742  111111   11246889999999998887765  57999999


Q ss_pred             eCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcc---cCCCCccccccccCcHHHHH
Q 027007           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI---ADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~---~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      +|+....  ...++.+.+++|+.++.++++++...+..++|||+||..+|+......   .+|+.+..   +.+.|+.+|
T Consensus        87 lAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~---p~~~Y~~sK  163 (668)
T PLN02260         87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLL---PTNPYSATK  163 (668)
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCC---CCCCcHHHH
Confidence            9997533  223456788999999999999999875468999999999998654321   12222221   246799999


Q ss_pred             HHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          147 AVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       147 ~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ..+|.+++.+.. ++++++++||+++|||++.
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~  195 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF  195 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCCC
Confidence            999999998864 5899999999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.95  E-value=5.1e-26  Score=196.60  Aligned_cols=169  Identities=21%  Similarity=0.274  Sum_probs=130.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-CC---CCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG---LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ||||||||+||||++|+++|+++|++|++++|..... +.   .....+++++.+|+.++.     +.++|+|||+|+..
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa~~  194 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLACPA  194 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeeeec
Confidence            7999999999999999999999999999998753211 11   111236788899987753     35799999999864


Q ss_pred             CC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCc--cccccccCcHHHHHHHHHHH
Q 027007           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~--~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ..  ...++.+.+++|+.++.+++++|+..+ . ++|++||..+|+.....+.+|+.+  .++..+.+.|+.+|.++|.+
T Consensus       195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~  272 (442)
T PLN02206        195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETL  272 (442)
T ss_pred             chhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHH
Confidence            32  234677899999999999999999875 3 899999999998654434444321  11222346799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ++.+.+ ++++++++||+++|||+.
T Consensus       273 ~~~y~~~~g~~~~ilR~~~vyGp~~  297 (442)
T PLN02206        273 TMDYHRGANVEVRIARIFNTYGPRM  297 (442)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCC
Confidence            998764 589999999999999974

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.94  E-value=4.3e-26  Score=188.60  Aligned_cols=180  Identities=32%  Similarity=0.461  Sum_probs=145.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCC--CCCCC---CCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--ISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~--~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +++||||+||+|++++++|++++  .++.+++..+..  .....   ....++++++|+.|..++.++++++ .|+|+|+
T Consensus         6 ~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa   84 (361)
T KOG1430|consen    6 SVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHCAA   84 (361)
T ss_pred             EEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEecc
Confidence            68999999999999999999998  899999987642  11111   1357899999999999999999999 7888876


Q ss_pred             ccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-cccCCCCccccccccCcHHHHHHHHHH
Q 027007           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      ...+  ...+.+..+++|+.||.+++++|.+.+ ++++||+||..+..+... ...+|+.+.+ ..+...|+.||+.+|.
T Consensus        85 ~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p-~~~~d~Y~~sKa~aE~  162 (361)
T KOG1430|consen   85 SPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYP-LKHIDPYGESKALAEK  162 (361)
T ss_pred             ccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCc-cccccccchHHHHHHH
Confidence            5322  233578899999999999999999995 799999999988876554 5566666655 4455679999999999


Q ss_pred             HHHHHH-hcCCCeEEEecCceecCCCCchhHHHH
Q 027007          152 IALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVA  184 (229)
Q Consensus       152 ~~~~~~-~~gi~~~~irpg~i~g~~~~~~~~~~~  184 (229)
                      ++++.+ ..++.++++||..||||++...-..+.
T Consensus       163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~  196 (361)
T KOG1430|consen  163 LVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIV  196 (361)
T ss_pred             HHHHhcCCCCeeEEEEccccccCCCCccccHHHH
Confidence            999987 457999999999999999865443333

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.94  E-value=1e-26  Score=173.45  Aligned_cols=195  Identities=22%  Similarity=0.168  Sum_probs=157.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      .+||||+++||+++++.|+++|++|.+.+++....+.    +.....-..+.+|+++..++...++       .+++|+|
T Consensus        17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVn   96 (256)
T KOG1200|consen   17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVN   96 (256)
T ss_pred             eEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEE
Confidence            6899999999999999999999999999998764332    2221244568999999988866443       4899999


Q ss_pred             eCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC-----CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           72 TAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        72 ~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||+..      ..+++|++.+.+|+.|++.+.+++.+.+     ...+||++||..+..+.-+.              +
T Consensus        97 cAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ--------------t  162 (256)
T KOG1200|consen   97 CAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ--------------T  162 (256)
T ss_pred             cCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc--------------h
Confidence            999843      2567899999999999999999987762     12389999998776554332              3


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      .|.++|.    +.+..++|+++++||+|.+.||+|-+|+....++.+.+.+.+.+ ++++++.++|+++...||..
T Consensus       163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~i-Pmgr~G~~EevA~~V~fLAS  237 (256)
T KOG1200|consen  163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMI-PMGRLGEAEEVANLVLFLAS  237 (256)
T ss_pred             hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccC-CccccCCHHHHHHHHHHHhc
Confidence            4999998    89999999999999999999999999998776666665555554 47999999999999998873

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.94  E-value=1e-25  Score=186.88  Aligned_cols=172  Identities=22%  Similarity=0.290  Sum_probs=135.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCC-----CCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS-----DISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~   72 (229)
                      +|+||||||+||++++++|+++|  ++|++++|...     +.+.+.....++++.+|++|++++.++++.  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            68999999999999999999987  78998876421     112222223678899999999999999886  8999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc-ccCCCCccccccccCcHHHHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      |+....  ...++..++++|+.++.++++++.+.+...++|++||..+|+..... +.+|..+..+   .+.|+.+|..+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~---~~~Y~~sK~~~  157 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAP---SSPYSASKAAS  157 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCC---CCchHHHHHHH
Confidence            987432  33456778999999999999999887533489999999999864322 3444433322   35699999999


Q ss_pred             HHHHHHHH-hcCCCeEEEecCceecCCC
Q 027007          150 DKIALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       150 e~~~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      |.+++.++ ..+++++++||+.+|||..
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~  185 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCSNNYGPYQ  185 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence            99999876 4589999999999999975

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=1.5e-25  Score=179.43  Aligned_cols=151  Identities=28%  Similarity=0.340  Sum_probs=130.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc--c
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL--V   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~--~   76 (229)
                      |+|||||++|.+|.+|+++|. .+++|+.++|.                ..|++|++.+.+++.  ++|+|||+|++  +
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~----------------~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRA----------------ELDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc----------------cccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            899999999999999999998 77999999987                369999999999987  58999999998  4


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                      +.++.+++..+.+|..++.+++++|.+.+  -++||+||.+++.+..+.++.|+..+.|   .+.||.||.+.|..+++.
T Consensus        64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~~Y~E~D~~~P---~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          64 DKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGPYKETDTPNP---LNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             ccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCCCCCCCCCCCC---hhhhhHHHHHHHHHHHHh
Confidence            66777888999999999999999999986  4999999999999877544444444333   467999999999999986


Q ss_pred             HhcCCCeEEEecCceecCCC
Q 027007          157 ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+   +..++|.+++||...
T Consensus       139 ~~---~~~I~Rtswv~g~~g  155 (281)
T COG1091         139 GP---RHLILRTSWVYGEYG  155 (281)
T ss_pred             CC---CEEEEEeeeeecCCC
Confidence            54   479999999999975

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.94  E-value=7.7e-27  Score=185.89  Aligned_cols=161  Identities=21%  Similarity=0.264  Sum_probs=134.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC------CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||++||.+++++|+++|++|+++.|+.+++..+..+      ..++++.+|+++++++.++..       .+|+
T Consensus         8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300           8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            699999999999999999999999999999998876654332      357899999999999887664       4899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||||...      .+.++..+.+++|+.++..|.+++.+.+   +.++||+++|.+++-+.+..              
T Consensus        88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~--------------  153 (265)
T COG0300          88 LVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM--------------  153 (265)
T ss_pred             EEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch--------------
Confidence            999999732      2334556789999999999999998765   23589999999998776443              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.|++||+    ++|.+..|+..+|++|.++.||.+.+++.
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~  194 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF  194 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc
Confidence            45999998    67777788878899999999999999875

>PLN02686 cinnamoyl-CoA reductase

Probab=99.94  E-value=6.2e-26  Score=192.40  Aligned_cols=176  Identities=28%  Similarity=0.406  Sum_probs=133.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----------CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |+||||||+||||++++++|+++|++|+++.|+.+..+.+..          ...++++.+|++|.+++.++++++|.||
T Consensus        54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V~  133 (367)
T PLN02686         54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGVF  133 (367)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhccEEE
Confidence            479999999999999999999999999998887543221100          1257889999999999999999999999


Q ss_pred             EeCcccCCCC--CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc--eeeecC--CC--cccCCCCccc---ccccc
Q 027007           71 HTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF--FALGST--DG--YIADENQVHE---EKYFC  139 (229)
Q Consensus        71 ~~a~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~--~~~~~~--~~--~~~~~~~~~~---~~~~~  139 (229)
                      |+|+......  ..+....++|+.++.++++++.+...++++|++||.  .+|+..  ..  ...+|+.+.+   +..+.
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            9998753221  122456788999999999999876347899999996  356531  11  2244433221   11234


Q ss_pred             CcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +.|+.+|.++|.+++.+++ +|++++++||+++|||+.
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF  251 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence            5699999999999998864 599999999999999975

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.94  E-value=4.6e-25  Score=185.33  Aligned_cols=172  Identities=22%  Similarity=0.194  Sum_probs=136.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCC-----CCCCeEEEEccCCChhhHHhhcCC--ccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP-----SEGALELVYGDVTDYRSLVDACFG--CHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--~d~   68 (229)
                      |+||||||+||||++++++|+++|++|++++|+.+.     .+.+.     ....++++.+|++|.+++.++++.  +|+
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   86 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE   86 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence            589999999999999999999999999999987542     11111     113578999999999999888874  799


Q ss_pred             EEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCC----ceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV----EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||+|+....  ...++...+++|+.++.++++++.+.+..    .++|++||..+|+.... +.+|+.+..   +.+.|
T Consensus        87 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~---p~~~Y  162 (340)
T PLN02653         87 VYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFH---PRSPY  162 (340)
T ss_pred             EEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCC---CCChh
Confidence            9999997432  23456777899999999999999987532    38999999999987554 444444332   24679


Q ss_pred             HHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          143 ERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +.||.++|.+++.++. ++++++..++.++|||+.
T Consensus       163 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        163 AVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR  197 (340)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence            9999999999998864 588888899999999964

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=2.9e-25  Score=194.19  Aligned_cols=180  Identities=21%  Similarity=0.239  Sum_probs=135.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCCCCCC-------CCC-------------C------CCCeEEEEc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDIS-------GLP-------------S------EGALELVYG   51 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~-------~~~-------------~------~~~~~~~~~   51 (229)
                      ++|+|||||||||++++++|++.+   .+|+++.|......       ++.             .      ..+++++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            479999999999999999999864   36899999754211       000             0      046899999


Q ss_pred             cCC-------ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC
Q 027007           52 DVT-------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG  124 (229)
Q Consensus        52 D~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~  124 (229)
                      |++       +.+.+.++++++|+|||+|+.+... .+++..+++|+.||.++++++......+++||+||.++||...+
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~  170 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG  170 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence            998       4445677888999999999986543 46778899999999999999988645679999999999986432


Q ss_pred             cccCCCCc----------------------------------------------cc--cccccCcHHHHHHHHHHHHHHH
Q 027007          125 YIADENQV----------------------------------------------HE--EKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus       125 ~~~~~~~~----------------------------------------------~~--~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                      ...+...+                                              .+  ...+.+.|+.||+++|.+++.+
T Consensus       171 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~  250 (491)
T PLN02996        171 LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF  250 (491)
T ss_pred             eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh
Confidence            11110000                                              00  1224567999999999999887


Q ss_pred             HhcCCCeEEEecCceecCCCCchhHH
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLTTGNL  182 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~~~~~  182 (229)
                      .. +++++++||+++|||.+.+...|
T Consensus       251 ~~-~lpv~i~RP~~V~G~~~~p~~gw  275 (491)
T PLN02996        251 KE-NLPLVIIRPTMITSTYKEPFPGW  275 (491)
T ss_pred             cC-CCCEEEECCCEeccCCcCCCCCc
Confidence            54 89999999999999987554333

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.94  E-value=3.2e-25  Score=183.84  Aligned_cols=165  Identities=22%  Similarity=0.279  Sum_probs=121.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hH-Hhhc-----CCccEEEEeC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SL-VDAC-----FGCHVIFHTA   73 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~-~~~~-----~~~d~vi~~a   73 (229)
                      ||||||+||||++|+++|+++|++++++.|+.......     ..+.++|+.|..   ++ .+++     .++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            79999999999999999999999877776654321110     122345665543   32 3333     2689999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      +.......+....++.|+.++.+++++|.+.. . ++||+||.++|+.....+.+|..+..+   .+.|+.+|.++|.++
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~  151 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYEKP---LNVYGYSKFLFDEYV  151 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCCCC---CCHHHHHHHHHHHHH
Confidence            86433223445689999999999999999875 4 699999999998754334445433322   467999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.+.. ++++++++||+++|||+..
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~  176 (308)
T PRK11150        152 RQILPEANSQICGFRYFNVYGPREG  176 (308)
T ss_pred             HHHHHHcCCCEEEEeeeeecCCCCC
Confidence            98864 4899999999999999753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.93  E-value=3.9e-25  Score=182.90  Aligned_cols=157  Identities=20%  Similarity=0.183  Sum_probs=126.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC---
Q 027007            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP---   78 (229)
Q Consensus         4 lItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~---   78 (229)
                      ||||||||||++|+++|+++|++|+++.+.               ..+|++|.+++.++++  ++|+|||+|+....   
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999988766432               1579999999998877  47999999987432   


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccc-ccccc-CcHHHHHHHHHHHHHHH
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFC-TQYERSKAVADKIALQA  156 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~-~~~~~-~~Y~~sK~~~e~~~~~~  156 (229)
                      ...++.+.++.|+.++.+++++|.+.. .+++|++||..+|++....+.+|+.+.+ +..+. ..|+.+|.++|.+++.+
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  144 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY  144 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence            234567789999999999999999874 6799999999999875555555554221 11222 34999999999998887


Q ss_pred             Hh-cCCCeEEEecCceecCCC
Q 027007          157 AS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       157 ~~-~gi~~~~irpg~i~g~~~  176 (229)
                      .+ .+++++++||+.+|||+.
T Consensus       145 ~~~~~~~~~~~R~~~vyG~~~  165 (306)
T PLN02725        145 RIQYGWDAISGMPTNLYGPHD  165 (306)
T ss_pred             HHHhCCCEEEEEecceeCCCC
Confidence            64 489999999999999974

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.9e-26  Score=183.94  Aligned_cols=195  Identities=14%  Similarity=0.125  Sum_probs=144.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C--CCCeEEEEccCCChhhHHhhcC------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~~------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...    .  ..++.++++|++|.+++.++++      .+|++
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~l   89 (263)
T PRK08339         10 LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIF   89 (263)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEE
Confidence            5899999999999999999999999999999865433211    1  1357889999999999877764      48999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||...      .+.++|++.+++|+.++..+++++.+.+   +.++||++||..+..+.+..              .
T Consensus        90 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~--------------~  155 (263)
T PRK08339         90 FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI--------------A  155 (263)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc--------------h
Confidence            99998632      2335688899999999999999887764   23589999998765443322              3


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-----------HHHHHHhhcccceeeeehhhHhhhh
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-----------NLVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                      .|+.+|.    +++.++++++++||+|++|.||.+.++......           ....+.. ....+.++...|+|++.
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~p~dva~  234 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY-AKPIPLGRLGEPEEIGY  234 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH-hccCCcccCcCHHHHHH
Confidence            4999998    556666777788999999999999888521100           0011111 22234577888999998


Q ss_pred             hhHHHH
Q 027007          206 SCKFLT  211 (229)
Q Consensus       206 ~~~~l~  211 (229)
                      ++.||-
T Consensus       235 ~v~fL~  240 (263)
T PRK08339        235 LVAFLA  240 (263)
T ss_pred             HHHHHh
Confidence            887764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.93  E-value=1.4e-25  Score=184.05  Aligned_cols=154  Identities=28%  Similarity=0.389  Sum_probs=118.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC-
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE-   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~-   77 (229)
                      |||||||++|+||+++.++|.++|++|+.++|+                ..|++|.+++.+.++  ++|+|||||+... 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            999999999999999999999999999999776                568999999988876  4899999998743 


Q ss_pred             -CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           78 -PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        78 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                       .++.+++..+.+|+.++.+|+++|...+  .++||+||..+|++..+.+..|+.++.|   .+.||.+|..+|..+++.
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~y~E~d~~~P---~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGPYTEDDPPNP---LNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS-------SSHHHHHHHHHHHHHHHH
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccccccCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence             3556788899999999999999999875  4999999999998775555555544433   577999999999999885


Q ss_pred             HhcCCCeEEEecCceecCCCCc
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~  178 (229)
                      .+   +..++|++++||+....
T Consensus       140 ~~---~~~IlR~~~~~g~~~~~  158 (286)
T PF04321_consen  140 CP---NALILRTSWVYGPSGRN  158 (286)
T ss_dssp             -S---SEEEEEE-SEESSSSSS
T ss_pred             cC---CEEEEecceecccCCCc
Confidence            44   58999999999995433

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=2.5e-25  Score=183.90  Aligned_cols=194  Identities=17%  Similarity=0.154  Sum_probs=143.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++..++.+.  .+.    +. ....+.++++|++|.+++.++++       ++|
T Consensus        57 ~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         57 KALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             EEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999999999988775431  111    11 11357788999999998877654       589


Q ss_pred             EEEEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +||||||...       .+.+++++.+++|+.++.++++++.+.+. .++||++||..++.+....              
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  202 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL--------------  202 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc--------------
Confidence            9999999631       12346788999999999999999988753 2499999999887654322              


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|.+.+.+.+.    +.++|+++++|+||.+++|.....   ......  .....+.++.+.++|++.++.||-
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~--~~~~~p~~r~~~p~dva~~~~~l~  279 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD--FGSETPMKRPGQPVEMAPLYVLLA  279 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH--HhcCCCCCCCcCHHHHHHHHHHHh
Confidence            3499999966655544    445799999999999999974321   111111  222345677889999998887763

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.93  E-value=8.1e-25  Score=183.56  Aligned_cols=172  Identities=23%  Similarity=0.323  Sum_probs=134.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      ||||||||+||||++++++|+++|++|++++|.......    +.  ....+.++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999999999999875322111    00  11246778999999999988876  58999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      |+....  ....+.+.+++|+.++.++++++++.+ .++||++||..+|+.....+.+|+.+..  .+.+.|+.+|..+|
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~--~p~~~Y~~sK~~~E  157 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVE  157 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCC--CCCChhHHHHHHHH
Confidence            986432  223456789999999999999998874 6799999999999865444455554431  12467999999999


Q ss_pred             HHHHHHHh--cCCCeEEEecCceecCC
Q 027007          151 KIALQAAS--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       151 ~~~~~~~~--~gi~~~~irpg~i~g~~  175 (229)
                      .+++.+++  .+++++++|++.+|||.
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~  184 (338)
T PRK10675        158 QILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_pred             HHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence            99998864  27899999999999873

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-25  Score=181.22  Aligned_cols=195  Identities=21%  Similarity=0.174  Sum_probs=142.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    .   ....+.++++|++|.+++.++++       .+|
T Consensus         9 ~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   88 (260)
T PRK07063          9 VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLD   88 (260)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence            689999999999999999999999999999976543321    1   12357789999999998877664       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (260)
T PRK07063         89 VLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG--------------  154 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC--------------
Confidence            99999996321      234677889999999999999987653   2358999999876544322              


Q ss_pred             cCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch-----h-HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          139 CTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT-----G-NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      ...|+.+|++.+.+    +.+++++|+++++|+||++-+|.....     . ...... .....+.++.+.++|++.++.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~va~~~~  233 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAE-TLALQPMKRIGRPEEVAMTAV  233 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHH-HHhcCCCCCCCCHHHHHHHHH
Confidence            23499999955544    455556799999999999988853211     0 001111 112334567888999988887


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       234 fl~  236 (260)
T PRK07063        234 FLA  236 (260)
T ss_pred             HHc
Confidence            763

>PLN02240 UDP-glucose 4-epimerase

Probab=99.93  E-value=2.9e-24  Score=181.19  Aligned_cols=171  Identities=20%  Similarity=0.254  Sum_probs=135.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-------CCC--CCCCeEEEEccCCChhhHHhhcC--CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACF--GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   69 (229)
                      ++|+||||+||||++++++|+++|++|++++|......       ...  ...+++++.+|++|++++.++++  ++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            37999999999999999999999999999987532110       000  11357889999999999988876  68999


Q ss_pred             EEeCcccC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           70 FHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        70 i~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      ||+|+...  ....++.+.+++|+.++.++++++.+.+ .+++|++||..+|+.....+.+|+.+..+   .+.|+.+|.
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~  161 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSA---TNPYGRTKL  161 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCC---CCHHHHHHH
Confidence            99998643  2334677889999999999999998764 67999999998898654445556554433   467999999


Q ss_pred             HHHHHHHHHHh--cCCCeEEEecCceecCC
Q 027007          148 VADKIALQAAS--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       148 ~~e~~~~~~~~--~gi~~~~irpg~i~g~~  175 (229)
                      ++|.+++.+..  .+++++++|++++||+.
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~  191 (352)
T PLN02240        162 FIEEICRDIHASDPEWKIILLRYFNPVGAH  191 (352)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence            99999998753  47899999999999974

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-25  Score=180.82  Aligned_cols=196  Identities=18%  Similarity=0.168  Sum_probs=142.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+++..  ...+.++++|++|.+++.++++       .+|+||||
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~   87 (261)
T PRK08265          8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNL   87 (261)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999998654332211  1357889999999998877654       57999999


Q ss_pred             CcccC-----CCCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           73 AALVE-----PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        73 a~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ||...     .+.+++++.+++|+.++.++++++.+.+  ..++||++||..+..+.+.              ...|+.+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~as  153 (261)
T PRK08265         88 ACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG--------------RWLYPAS  153 (261)
T ss_pred             CCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------------CchhHHH
Confidence            98632     2234677889999999999999988754  2358999999876543322              2349999


Q ss_pred             HHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhH--H-HHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGN--L-VAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |...+.+.    .++.++|+++++|+||.+.++.......  . ..........+.++.+.++|++.++.|+-
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~  226 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLC  226 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHc
Confidence            99655554    4555679999999999999885321110  0 11112222334567788899888877764

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-25  Score=179.26  Aligned_cols=194  Identities=18%  Similarity=0.182  Sum_probs=137.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCC----CCC-CCCeEEEEccCCChhhHHhhc------------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LPS-EGALELVYGDVTDYRSLVDAC------------   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~------------   63 (229)
                      +++||||+|+||++++++|+++|++|++..+ +.++.+.    +.. ...+..+.+|+++.+++.+++            
T Consensus         6 ~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747          6 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            6899999999999999999999999988753 3332221    111 134677899999987764432            


Q ss_pred             -CCccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           64 -FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        64 -~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                       .++|+||||||....      ..++|++.+++|+.+++.+++++.+.+. .++||++||..++.+.++           
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  154 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----------  154 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC-----------
Confidence             158999999996321      1234678899999999999999988652 359999999987654322           


Q ss_pred             ccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.||+..+    .++.++.++|+++++|+||.+.+|.....  ..... .......+.+++..+++++.++.|
T Consensus       155 ---~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~  230 (252)
T PRK12747        155 ---FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK-QYATTISAFNRLGEVEDIADTAAF  230 (252)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH-HHHHhcCcccCCCCHHHHHHHHHH
Confidence               245999999555    44555667799999999999999864211  11111 112223345677889999988877


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       231 l  231 (252)
T PRK12747        231 L  231 (252)
T ss_pred             H
Confidence            6

>PRK07985 oxidoreductase; Provisional

Probab=99.93  E-value=9.2e-25  Score=180.08  Aligned_cols=194  Identities=22%  Similarity=0.198  Sum_probs=141.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC--CCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~--~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++.+|+.+  ..+.+.     ....+.++.+|++|.+++.++++       ++|
T Consensus        51 ~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         51 KALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999998876532  111111     11357789999999988766543       579


Q ss_pred             EEEEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ++||+||...       .+.++|++.+++|+.++.++++++.+.+. .++||++||..++.+.+.              .
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~--------------~  196 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH--------------L  196 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC--------------c
Confidence            9999998531       12346778899999999999999988642 358999999887754332              2


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCc---hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|+..+    .++.+++++|+++++|+||++++|....   .......+  ....+.++.+.|+|++.++.||-
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~r~~~pedva~~~~fL~  273 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF--GQQTPMKRAGQPAELAPVYVYLA  273 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHH--hccCCCCCCCCHHHHHHHHHhhh
Confidence            34999999554    5555566679999999999999996421   11111221  22234567888999998888764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.93  E-value=1.5e-24  Score=175.53  Aligned_cols=190  Identities=18%  Similarity=0.203  Sum_probs=140.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+..+..      .++++++|++|++++.++++       ++|+||||||
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag   81 (258)
T PRK06398          8 VAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG   81 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            6999999999999999999999999999999764321      57889999999998877664       5899999998


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      ..++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~s  147 (258)
T PRK06398         82 IESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN--------------AAAYVTS  147 (258)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC--------------Cchhhhh
Confidence            6321      223567789999999999999987753   3469999999877654322              2459999


Q ss_pred             HHHHHHHHHHHHh---cCCCeEEEecCceecCCCCch--------hHHHHH--HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTT--------GNLVAK--LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~~~~~~---~gi~~~~irpg~i~g~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+..+.+.+.++.   .++++++|+||.+.+|.....        ......  ..+....+.++...+++++.++.|+-
T Consensus       148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  226 (258)
T PRK06398        148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA  226 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHc
Confidence            9977766665542   249999999999988753211        011111  11223334567778899988877764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.93  E-value=4e-24  Score=175.44  Aligned_cols=151  Identities=26%  Similarity=0.338  Sum_probs=125.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC-
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP-   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~-   78 (229)
                      |||||||+||||++++++|+++|++|++++|.                .+|+.|.+++.+++++  +|+|||+|+.... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            68999999999999999999999999999885                4699999999998875  5999999987432 


Q ss_pred             -CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                       ...++...+++|+.++.++++++.+.+  .++|++||.++|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+ 
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~E~~~~~~---~~~Y~~~K~~~E~~~~~~-  138 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGKRPYREDDATNP---LNVYGQSKLAGEQAIRAA-  138 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeecCCCCCCCCCCCCCCC---cchhhHHHHHHHHHHHHh-
Confidence             223456789999999999999998874  3899999999997654444555443322   457999999999998875 


Q ss_pred             hcCCCeEEEecCceecCCC
Q 027007          158 SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~~  176 (229)
                        +.+++++||+.+|||..
T Consensus       139 --~~~~~ilR~~~v~G~~~  155 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGGG  155 (287)
T ss_pred             --CCCeEEEEeeecccCCC
Confidence              67899999999999974

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.93  E-value=2.9e-24  Score=178.28  Aligned_cols=167  Identities=19%  Similarity=0.209  Sum_probs=127.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc----CCccEEEEeCcccC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC----FGCHVIFHTAALVE   77 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~d~vi~~a~~~~   77 (229)
                      |||||||||||++++++|.++|+ +|++++|..... .+... ....+..|+++.+.++.+.    .++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL-ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh-hheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            68999999999999999999997 788887754321 11110 1134667888887776665    37999999999765


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      ....++...+++|+.++.+++++|.+.. . ++|++||..+|+.......+++.+.   .+.+.|+.+|..+|.+++++.
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~~---~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGRELE---RPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCcC---CCCCHHHHHHHHHHHHHHHHh
Confidence            5555677889999999999999998875 3 8999999999986544333333221   234679999999999998753


Q ss_pred             -h--cCCCeEEEecCceecCCC
Q 027007          158 -S--EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       158 -~--~gi~~~~irpg~i~g~~~  176 (229)
                       +  .+++++++||+.+|||+.
T Consensus       154 ~~~~~~~~~~~lR~~~vyG~~~  175 (314)
T TIGR02197       154 LPEALSAQVVGLRYFNVYGPRE  175 (314)
T ss_pred             HhhccCCceEEEEEeeccCCCC
Confidence             2  257899999999999975

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=3.8e-25  Score=178.36  Aligned_cols=195  Identities=12%  Similarity=0.151  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CC-CCC-CCCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS-GLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~-~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      ++|||||+++||++++++|+++|++|++++|+... .. .+. ...++.++++|++|.+++.++++       ++|++||
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~   89 (251)
T PRK12481         10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILIN   89 (251)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            58999999999999999999999999999886421 10 111 11357889999999999877764       5899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||....      +.++|++.+++|+.++..+++++.+.+.    .++||++||..++.+....              ..
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------------~~  155 (251)
T PRK12481         90 NAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV--------------PS  155 (251)
T ss_pred             CCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC--------------cc
Confidence            9997321      2346788899999999999999876531    2589999998776543221              34


Q ss_pred             HHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.||...    +.++.+++++|+++++|+||.+-++......  ....+...... +..+...|+|++.++.||-
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-p~~~~~~peeva~~~~~L~  230 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERI-PASRWGTPDDLAGPAIFLS  230 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC-CCCCCcCHHHHHHHHHHHh
Confidence            99999955    4555566678999999999999988532211  11111122222 3567788999999888864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=6.3e-25  Score=179.06  Aligned_cols=195  Identities=12%  Similarity=0.110  Sum_probs=141.1

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCC---CCCCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      .+|||||++  +||++++++|+++|++|++.+|+....   +++.. ......+++|++|.+++.++++       .+|+
T Consensus         9 ~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (271)
T PRK06505          9 RGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDF   88 (271)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            489999997  999999999999999999998864211   11111 1223568999999999876654       5899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||||...          .+.++|++.+++|+.++.++++++.+++. .++||++||..+..+.+.             
T Consensus        89 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------  155 (271)
T PRK06505         89 VVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN-------------  155 (271)
T ss_pred             EEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc-------------
Confidence            999999642          12245778899999999999999988763 258999999765433221             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH--HHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN--LVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ...|+.+|+    +++.++.+++++||+||+|.||.+.++.......  ...... ....++++.+.|+|++.++.||-
T Consensus       156 -~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~-~~~~p~~r~~~peeva~~~~fL~  233 (271)
T PRK06505        156 -YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQ-QRNSPLRRTVTIDEVGGSALYLL  233 (271)
T ss_pred             -cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHH-hhcCCccccCCHHHHHHHHHHHh
Confidence             245999999    5666777777889999999999999986321111  111111 12234567889999999888863

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=9.5e-25  Score=176.16  Aligned_cols=194  Identities=16%  Similarity=0.080  Sum_probs=141.3

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCC---CCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+  ++||++++++|+++|++|++.+|+...   .+++.. ..+.++++|++|++++.++++       ++|++
T Consensus         9 ~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   87 (252)
T PRK06079          9 KIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVD-EEDLLVECDVASDESIERAFATIKERVGKIDGI   87 (252)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999  799999999999999999999987321   111211 257789999999998876653       58999


Q ss_pred             EEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           70 FHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||...          .+.++|++.+++|+.++..+++++.+.+. .++||++||..+..+.+.              
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~--------------  153 (252)
T PRK06079         88 VHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN--------------  153 (252)
T ss_pred             EEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc--------------
Confidence            99999642          12235778899999999999999988753 248999998765433221              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|+    +++.++.++.++|+++++|.||.+.++.....  .....+.... ..+.++.+.|+|++.++.|+-
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~-~~p~~r~~~pedva~~~~~l~  231 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDS-RTVDGVGVTIEEVGNTAAFLL  231 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHh-cCcccCCCCHHHHHHHHHHHh
Confidence            245999999    55566666777899999999999999853211  1111111222 234567889999999888874

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.2e-25  Score=178.88  Aligned_cols=196  Identities=21%  Similarity=0.210  Sum_probs=141.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.    . ..++..+++|++|++++.++++       ++|+|
T Consensus        11 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T PRK05867         11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIA   90 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999865433221    1 1357788999999998877654       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.+++++.+++|+.++..+++++.+.+.    .+++|++||..+.......            ..
T Consensus        91 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------~~  158 (253)
T PRK05867         91 VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ------------QV  158 (253)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCC------------Cc
Confidence            999997321      2245677899999999999999876531    2479999987643211000            01


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|...+    .+++++.++|+++++|+||.+.+|..........  .+....+.++...|+|++.++.||-
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~~r~~~p~~va~~~~~L~  232 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQP--LWEPKIPLGRLGRPEELAGLYLYLA  232 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHH--HHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            35999998555    4555566779999999999999986433222211  1222234567888999998887764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-24  Score=175.90  Aligned_cols=197  Identities=18%  Similarity=0.170  Sum_probs=139.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      |++|||||+|+||++++++|+++|++|++++|++++.+.    +.....+.++++|++|++++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            899999999999999999999999999999998654322    1112357789999999998877653       58999


Q ss_pred             EEeCcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           70 FHTAALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        70 i~~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |||||...        ...+++.+.+.+|+.++..+.+.+.+.    ...++||++||..+..+.+.             
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~-------------  147 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP-------------  147 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-------------
Confidence            99999632        112345566888999888887766543    12458999999876543221             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-----------H-HHHHHhhcccceeeeehhhH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-----------N-LVAKLQWKKVDLVKDIFLLE  201 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~  201 (229)
                       ...|+.+|.    +++.++.++.++|++++.|.||.+-+|+.....           . ...+..... .++++.+.|+
T Consensus       148 -~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~  225 (259)
T PRK08340        148 -LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER-TPLKRTGRWE  225 (259)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc-CCccCCCCHH
Confidence             235999998    445555566667999999999999998632100           0 001111122 2467788899


Q ss_pred             hhhhhhHHHHH
Q 027007          202 RMRHSCKFLTW  212 (229)
Q Consensus       202 ~~~~~~~~l~~  212 (229)
                      |++.++.||-.
T Consensus       226 dva~~~~fL~s  236 (259)
T PRK08340        226 ELGSLIAFLLS  236 (259)
T ss_pred             HHHHHHHHHcC
Confidence            99988887643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.92  E-value=4.7e-25  Score=178.26  Aligned_cols=196  Identities=23%  Similarity=0.210  Sum_probs=140.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+|||+
T Consensus         8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   87 (257)
T PRK07067          8 VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNN   87 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998754332211  1257889999999999877665       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |+....      +.+++++.+++|+.++.++++++.+.+    ..++||++||.....+.+              +...|
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y  153 (257)
T PRK07067         88 AALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA--------------LVSHY  153 (257)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC--------------CCchh
Confidence            986421      224577789999999999999997653    124899999975432211              12459


Q ss_pred             HHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHH----------HHHHhhcccceeeeehhhHhhhhhhH
Q 027007          143 ERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNL----------VAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       143 ~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      +.+|...+.++    +++.++|+++++++||.++||........          ..........+.+++..++|++.++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  233 (257)
T PRK07067        154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMAL  233 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHH
Confidence            99999655555    44556799999999999999863211100          01111222234567778888887776


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       234 ~l~  236 (257)
T PRK07067        234 FLA  236 (257)
T ss_pred             HHh
Confidence            654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.92  E-value=2.2e-24  Score=169.57  Aligned_cols=225  Identities=18%  Similarity=0.264  Sum_probs=161.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEEc-----CCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVR-----RTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      +++||||+||||++.+..+...  .++.+.++.     +...+++....++.+++++|+.+...+..++.  ++|.|||.
T Consensus         8 ~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vihf   87 (331)
T KOG0747|consen    8 NVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIHF   87 (331)
T ss_pred             eEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhhh
Confidence            6899999999999999999876  356665543     11223333334688999999999988877765  58999999


Q ss_pred             Ccc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccC-CCCccccccccCcHHHHHHHH
Q 027007           73 AAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD-ENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        73 a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      |+.  ++.+..++.+....|+.+|..|+++++..++.++|||+||..+||.+.....+ |..++.|   .++|+++|+++
T Consensus        88 aa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP---tnpyAasKaAa  164 (331)
T KOG0747|consen   88 AAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP---TNPYAASKAAA  164 (331)
T ss_pred             HhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC---CCchHHHHHHH
Confidence            986  34455667788999999999999999999888999999999999998765544 5444443   46799999999


Q ss_pred             HHHHHHHH-hcCCCeEEEecCceecCCCCch---hHHHHHHhh-cccceeeeehhhHhhhhhhHHHHHHHhhhhhcCccc
Q 027007          150 DKIALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQW-KKVDLVKDIFLLERMRHSCKFLTWLLSSLEQAGLDF  224 (229)
Q Consensus       150 e~~~~~~~-~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  224 (229)
                      |.+.+.+. ++|++++++|.++||||++.+.   +.|+..... +.....++-.......+.-++.+.+..+.+.+-...
T Consensus       165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~ge  244 (331)
T KOG0747|consen  165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGE  244 (331)
T ss_pred             HHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCccc
Confidence            99999997 5699999999999999998543   233332222 222222233333333344444455455555544455


Q ss_pred             cccCC
Q 027007          225 AFPFG  229 (229)
Q Consensus       225 ~~~~~  229 (229)
                      .|+-|
T Consensus       245 IYNIg  249 (331)
T KOG0747|consen  245 IYNIG  249 (331)
T ss_pred             eeecc
Confidence            55443

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.3e-25  Score=177.85  Aligned_cols=196  Identities=23%  Similarity=0.213  Sum_probs=142.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..     ..+++++.+|+++.+++.++++       ++|+
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            479999999999999999999999999999998755432211     1357889999999998877765       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC-----------CCceEEEEccceeeecCCCcccCCCC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-----------TVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                      |||+|+....      +.++++..+++|+.++.++++++.+.+           ..+++|++||..++.+.+.       
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  162 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ-------  162 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC-------
Confidence            9999996321      224577789999999999999886532           0258999999876643221       


Q ss_pred             ccccccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhh
Q 027007          132 VHEEKYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                             ...|+.+|.+.+.+++    ++.++|+++++++||++++|..... .......+.... +.++.+.|++++..
T Consensus       163 -------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~  234 (258)
T PRK06949        163 -------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSML-PRKRVGKPEDLDGL  234 (258)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcC-CCCCCcCHHHHHHH
Confidence                   2459999996655554    4455699999999999999974321 111112223332 35678889999888


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.|+-
T Consensus       235 ~~~l~  239 (258)
T PRK06949        235 LLLLA  239 (258)
T ss_pred             HHHHh
Confidence            77763

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=5.7e-25  Score=177.57  Aligned_cols=195  Identities=20%  Similarity=0.172  Sum_probs=141.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+    .. ...+.++++|++|.+++.++++       .+|+|
T Consensus        12 ~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   91 (255)
T PRK07523         12 RALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDIL   91 (255)
T ss_pred             EEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            799999999999999999999999999999986543221    11 1247789999999998877764       48999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||.....+.+.              ..
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~  157 (255)
T PRK07523         92 VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG--------------IA  157 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC--------------Cc
Confidence            999997421      223466788999999999999998763   2469999999765433221              24


Q ss_pred             cHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|...+.+.+    ++.++|+++++++||.+.++.....  .......+. ...+.++++.++|++.++.|+-
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~  233 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLE-KRTPAGRWGKVEELVGACVFLA  233 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHc
Confidence            59999996666654    4456799999999999999964211  111112222 2234567788899888877763

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=1e-24  Score=176.17  Aligned_cols=195  Identities=18%  Similarity=0.129  Sum_probs=138.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        12 ~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   91 (255)
T PRK05717         12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCN   91 (255)
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999887543322111  1357789999999988765543       47999999


Q ss_pred             CcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||....        ..+++++.+++|+.++.++++++.+.+  ..+++|++||..++.+.+.              .+.|
T Consensus        92 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--------------~~~Y  157 (255)
T PRK05717         92 AAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--------------TEAY  157 (255)
T ss_pred             CCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------------Ccch
Confidence            997432        223467889999999999999998653  2358999999876543321              2459


Q ss_pred             HHHHHHHHHHHHHHHh---cCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~---~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.+|+..+.+++.++.   .++++++++||.+.++..... ......... ...+.++.+.+++++..+.|+-
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~  229 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADH-AQHPAGRVGTVEDVAAMVAWLL  229 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHh-hcCCCCCCcCHHHHHHHHHHHc
Confidence            9999988777766643   259999999999999863211 011111111 1223456777888887766553

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.4e-24  Score=173.92  Aligned_cols=196  Identities=19%  Similarity=0.224  Sum_probs=141.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++ .+.    +.. ..++..+++|++|.+++.++++       ++|+
T Consensus        10 ~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         10 VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999997532 111    111 1357788999999998876654       4799


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.+++.+++++.+.+   ..++||++||..++...+...            .
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~------------~  157 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL------------Q  157 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC------------c
Confidence            9999997422      234577889999999999999887643   235899999987654332110            2


Q ss_pred             CcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|+..    +.++.++.++|+++++|+||++.+|...... ........ ...++++.+.++|++.++.|+
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~-~~~p~~r~~~~~dva~~~~~l  232 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFE-EQTPMQRMAKVDEMVGPAVFL  232 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence            4599999954    4555556677999999999999998642211 11111112 223467788899999888876

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=3.7e-24  Score=171.71  Aligned_cols=170  Identities=22%  Similarity=0.337  Sum_probs=143.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC------C-CCCCCeEEEEccCCChhhHHhhcC--CccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG------L-PSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~------~-~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   70 (229)
                      ++||||||+||||+|.+.+|+++|++|+++|.=... .+.      + .+...+.++++|++|.+.++++++  ++|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            479999999999999999999999999999873221 111      1 112578999999999999999997  489999


Q ss_pred             EeCcc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        71 ~~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      |.|+.  +..+.+++..++..|+.||.+|++.+++++ .+.+|+.||+.+||....-+.+|+.+.+  -+.++|+.+|.+
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~--~p~~pyg~tK~~  159 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTD--QPTNPYGKTKKA  159 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCC--CCCCcchhhhHH
Confidence            99986  455677889999999999999999999997 8899999999999987766666666555  235779999999


Q ss_pred             HHHHHHHHHh-cCCCeEEEecCceec
Q 027007          149 ADKIALQAAS-EGLPIVPVYPGVIYG  173 (229)
Q Consensus       149 ~e~~~~~~~~-~gi~~~~irpg~i~g  173 (229)
                      .|.++..+.. .+..+..+|.++++|
T Consensus       160 iE~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  160 IEEIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             HHHHHHhhhccccceEEEEEeccccC
Confidence            9999998863 468999999999999

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=1.1e-24  Score=177.89  Aligned_cols=196  Identities=13%  Similarity=0.076  Sum_probs=140.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCC--CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+  ++||++++++|+++|++|++.+|+..   ..+++..  ... ..+++|++|.+++.++++       ++|
T Consensus         7 ~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iD   85 (274)
T PRK08415          7 KGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKID   85 (274)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999997  79999999999999999999998742   2221111  112 578999999998876653       589


Q ss_pred             EEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           68 VIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        68 ~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ++|||||....          +.++|++.+++|+.+++++++++.+.+. .++||++||..+..+.+.            
T Consensus        86 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~------------  153 (274)
T PRK08415         86 FIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH------------  153 (274)
T ss_pred             EEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc------------
Confidence            99999996321          2245778899999999999999988753 258999999765432221            


Q ss_pred             cccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHH-HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAK-LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        ...|+.||+    +++.++.++.++|+++++|.||++.++.......+... .......++++...|+|++.++.|+-
T Consensus       154 --~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~  231 (274)
T PRK08415        154 --YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLL  231 (274)
T ss_pred             --chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHh
Confidence              245999999    56666777778899999999999998753211111100 01111234567788999998888775


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       232 s  232 (274)
T PRK08415        232 S  232 (274)
T ss_pred             h
Confidence            4

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=174.79  Aligned_cols=160  Identities=24%  Similarity=0.242  Sum_probs=124.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+..  ..++..+++|++|.+++.++++       .+|+||||
T Consensus         6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~   85 (277)
T PRK06180          6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNN   85 (277)
T ss_pred             EEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999998765433221  1357788999999998877665       47999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++++.+++   ..++||++||..++.+.++              ...|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~--------------~~~Y~  151 (277)
T PRK06180         86 AGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG--------------IGYYC  151 (277)
T ss_pred             CCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC--------------cchhH
Confidence            997421      123456779999999999999987642   2458999999876654321              24599


Q ss_pred             HHHHHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       144 ~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      .+|...+.+++.+    .+.|+++++++||.+.+++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence            9999776665554    4469999999999998875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=5e-24  Score=171.94  Aligned_cols=195  Identities=20%  Similarity=0.133  Sum_probs=138.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+|+||++++++|+++|++|++++|+... .+.    +. ...++.++++|++|++++.++++       .+|+
T Consensus         4 ~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          4 VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999986432 111    11 11357889999999988766554       5899


Q ss_pred             EEEeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccceeeecCCCcccCCCC
Q 027007           69 IFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        69 vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                      ||||||....        +.+++++.+++|+.++.++++++.+.+.         .++||++||..++.+...       
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  156 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN-------  156 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC-------
Confidence            9999986321        2245677899999999999999866421         357999999876544322       


Q ss_pred             ccccccccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                             ...|+.+|++.+.+++.++    ++|+++++++||.++++..................+..+...+.+++.++
T Consensus       157 -------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i  229 (256)
T PRK12745        157 -------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAV  229 (256)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHH
Confidence                   2459999998877766654    56999999999999998653321111221212223345566777777765


Q ss_pred             HHH
Q 027007          208 KFL  210 (229)
Q Consensus       208 ~~l  210 (229)
                      .++
T Consensus       230 ~~l  232 (256)
T PRK12745        230 AAL  232 (256)
T ss_pred             HHH
Confidence            553

>PRK06182 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.3e-24  Score=177.32  Aligned_cols=161  Identities=25%  Similarity=0.207  Sum_probs=125.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+.. .+++++++|++|.+++.++++       ++|+|||||
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a   82 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA   82 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            368999999999999999999999999999998765443322 257889999999999877765       689999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.++++..+++|+.++.++++.+.+.+   ..++||++||..+..+.+.              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  148 (273)
T PRK06182         83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL--------------GAWYHA  148 (273)
T ss_pred             CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC--------------ccHhHH
Confidence            97422      224577889999999888888776543   2468999999765433221              134999


Q ss_pred             HHHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +|.+.+.+.+    ++.++|+++++++||.+.+|+.
T Consensus       149 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        149 TKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             HHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence            9997776654    4446699999999999999864

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.92  E-value=9.4e-25  Score=175.91  Aligned_cols=167  Identities=33%  Similarity=0.500  Sum_probs=108.9

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCC------C----CCCC--------CCCCeEEEEccCCCh------hh
Q 027007            5 VSGASGYLGGRLCHALLKQGH--SVRALVRRTSD------I----SGLP--------SEGALELVYGDVTDY------RS   58 (229)
Q Consensus         5 ItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~------~----~~~~--------~~~~~~~~~~D~~~~------~~   58 (229)
                      |||||||+|++++++|++++.  +|+++.|..+.      +    ....        ...+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  99999997632      1    1100        025899999999985      46


Q ss_pred             HHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcc------cCCCCc
Q 027007           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI------ADENQV  132 (229)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~------~~~~~~  132 (229)
                      +.++.+++|+|||||+.+... .+.++..++|+.||.++++.|.... .++++|+||.++.+...+..      .++...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~  158 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL  158 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred             hhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccc
Confidence            777778899999999987654 3556789999999999999998654 35999999954444433222      112222


Q ss_pred             cccccccCcHHHHHHHHHHHHHHHHhc-CCCeEEEecCceec
Q 027007          133 HEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYG  173 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-gi~~~~irpg~i~g  173 (229)
                      .....+.+.|..||+.+|.++++..+. |++++++|||.++|
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence            233345568999999999999998866 99999999999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-24  Score=174.79  Aligned_cols=162  Identities=19%  Similarity=0.191  Sum_probs=125.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|++++.+.+..     ..+++++.+|++|.+++.++++       ++|+
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            479999999999999999999999999999997654322211     1357889999999998866553       5899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||+|+....       +.+++++.+++|+.++..+++++.+.+  ..++||++||...+.+.++              .
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~  151 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK--------------Y  151 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC--------------c
Confidence            9999986321       224567889999999999999998753  1248999999876543321              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...+.+++.+    .++++++++++||.+++|..
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence            45999999776666554    45689999999999999863

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.92  E-value=8.9e-25  Score=176.05  Aligned_cols=169  Identities=26%  Similarity=0.316  Sum_probs=127.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCC----C---CCCCCe----EEEEccCCChhhHHhhcC--CccE
Q 027007            3 ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----L---PSEGAL----ELVYGDVTDYRSLVDACF--GCHV   68 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~---~~~~~~----~~~~~D~~~~~~~~~~~~--~~d~   68 (229)
                      ||||||+|.||++|+++|++.+ .++++++|++.++-.    +   ....++    ..+.+|++|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999998 689999998643211    1   111233    345899999999999999  7999


Q ss_pred             EEEeCcc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           69 IFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        69 vi~~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      |+|+|+.  ++..+..+.+.+++|+.||.++++++.+++ ++++|++||.-+..+                 .+.||+||
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~P-----------------tnvmGatK  142 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVNP-----------------TNVMGATK  142 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS-------------------SHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCCC-----------------CcHHHHHH
Confidence            9999997  344567889999999999999999999985 889999999866543                 35699999


Q ss_pred             HHHHHHHHHHHhc----CCCeEEEecCceecCCCCchhHHHHHHhhc
Q 027007          147 AVADKIALQAASE----GLPIVPVYPGVIYGPGKLTTGNLVAKLQWK  189 (229)
Q Consensus       147 ~~~e~~~~~~~~~----gi~~~~irpg~i~g~~~~~~~~~~~~~~~~  189 (229)
                      .++|.+.+..+..    +.+++++|.|+|.|..+...+-|..+...+
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g  189 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNG  189 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcC
Confidence            9999999998754    378999999999998776666666665554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.3e-24  Score=172.84  Aligned_cols=191  Identities=17%  Similarity=0.138  Sum_probs=139.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.   .....++++++|+++.+++.++++       ++|+||||||
T Consensus         8 ~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   84 (252)
T PRK07856          8 VVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG   84 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            689999999999999999999999999999986441   112367889999999998877664       4699999998


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ....      +.+++++.+++|+.++..+++++.+.+    ..++||++||..++.+.+.              ...|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~~  150 (252)
T PRK07856         85 GSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG--------------TAAYGA  150 (252)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC--------------CchhHH
Confidence            6321      223567889999999999999987643    2358999999876644322              245999


Q ss_pred             HHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +|...+.+++.++    ++ ++++.++||.+.++.....  .......+ ....+.++...|++++.++.||-
T Consensus       151 sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~va~~~~~L~  221 (252)
T PRK07856        151 AKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAV-AATVPLGRLATPADIAWACLFLA  221 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHH-hhcCCCCCCcCHHHHHHHHHHHc
Confidence            9997777766554    34 9999999999998853211  00001111 12223466778888888877753

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-24  Score=174.05  Aligned_cols=195  Identities=19%  Similarity=0.232  Sum_probs=139.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.    . ...+.++.+|+++++++.++++       ++|+|
T Consensus         8 ~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (254)
T PRK07478          8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIA   87 (254)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999999999999999865433221    1 1357789999999998877664       58999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeec-CCCcccCCCCccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGS-TDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~-~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....       +.+++++.+++|+.++..+++++.+.+   ..++||++||..++.. .+.              
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--------------  153 (254)
T PRK07478         88 FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--------------  153 (254)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC--------------
Confidence            999997421       123567889999999999988877643   2358999999876532 111              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.||++.+.++    +++.++|+++++|+||.+.++......  ....... ....+.++...+++++..+.|+-
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~  231 (254)
T PRK07478        154 MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFV-AGLHALKRMAQPEEIAQAALFLA  231 (254)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHc
Confidence            245999999555554    455566899999999999998532211  1111111 22223456778888888777653

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.92  E-value=5.6e-24  Score=172.78  Aligned_cols=192  Identities=19%  Similarity=0.166  Sum_probs=139.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+..+...    ..+.++++|++|++++.++++       .+|+||||||
T Consensus        11 ~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   86 (266)
T PRK06171         11 IIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG   86 (266)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            68999999999999999999999999999998655432    257789999999998877654       4799999999


Q ss_pred             ccCC---------------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           75 LVEP---------------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        75 ~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ....               +.+++++.+++|+.++.++++++.+++.   .++||++||..++.+..+            
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  154 (266)
T PRK06171         87 INIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG------------  154 (266)
T ss_pred             ccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC------------
Confidence            6321               2235677899999999999999987642   248999999877654322            


Q ss_pred             cccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCcee-cCCCCchh------------HHHHHHhhc-ccceeeeeh
Q 027007          137 YFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIY-GPGKLTTG------------NLVAKLQWK-KVDLVKDIF  198 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~-g~~~~~~~------------~~~~~~~~~-~~~~~~~~~  198 (229)
                        ...|+.+|...+.+    +.++.++|+++++|+||.+. ++......            ......... ...++++.+
T Consensus       155 --~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  232 (266)
T PRK06171        155 --QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSG  232 (266)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCC
Confidence              24599999965554    45555679999999999986 44321100            000111111 133467788


Q ss_pred             hhHhhhhhhHHHH
Q 027007          199 LLERMRHSCKFLT  211 (229)
Q Consensus       199 ~~~~~~~~~~~l~  211 (229)
                      .++|++.++.||-
T Consensus       233 ~~~eva~~~~fl~  245 (266)
T PRK06171        233 KLSEVADLVCYLL  245 (266)
T ss_pred             CHHHhhhheeeee
Confidence            8999998887763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2.6e-24  Score=174.44  Aligned_cols=194  Identities=14%  Similarity=0.120  Sum_probs=139.2

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      .++||||++  +||++++++|+++|++|++.+|+..   ..+++... +....+++|++|++++.++++       ++|+
T Consensus        10 ~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   89 (260)
T PRK06603         10 KGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDF   89 (260)
T ss_pred             EEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccE
Confidence            589999997  8999999999999999999888631   11122111 223457899999999877654       4899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||+...          .+.++|++.+++|+.++..+++.+.+.+. .++||++||..+..+.+.             
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------  156 (260)
T PRK06603         90 LLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN-------------  156 (260)
T ss_pred             EEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc-------------
Confidence            999998632          12245778899999999999999887653 259999999765432221             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.||+    +++.++.++.++||++++|.||.+.++.....   .... +... ...+.++.+.|+|+++++.||
T Consensus       157 -~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~-~~~~-~~~p~~r~~~pedva~~~~~L  233 (260)
T PRK06603        157 -YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTML-KSHA-ATAPLKRNTTQEDVGGAAVYL  233 (260)
T ss_pred             -ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHH-HHHH-hcCCcCCCCCHHHHHHHHHHH
Confidence             245999999    55666677778899999999999988753211   1111 1111 223456788899999998887


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       234 ~  234 (260)
T PRK06603        234 F  234 (260)
T ss_pred             h
Confidence            4

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.92  E-value=1.7e-24  Score=175.48  Aligned_cols=193  Identities=19%  Similarity=0.193  Sum_probs=139.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+++..  ...+..+++|++|.+++.++++       ++|+||||
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   86 (262)
T TIGR03325         7 VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPN   86 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999998654433322  1257789999999988766654       57999999


Q ss_pred             CcccC---C----CC----CCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           73 AALVE---P----WL----PDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        73 a~~~~---~----~~----~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||...   +    +.    ++|++.+++|+.++.++++++.+.+.  .+++|++||..++.+...              .
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~  152 (262)
T TIGR03325        87 AGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG--------------G  152 (262)
T ss_pred             CCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC--------------C
Confidence            98631   1    11    24678899999999999999988642  258999998876543222              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch-----hH-----HHHHHhhcccceeeeehhhHhhhh
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT-----GN-----LVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                      ..|+.+|...+.+.+.+    +++ +++++|+||.+.+|.....     ..     ...+... ...++++.+.|++++.
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~eva~  230 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLK-SVLPIGRMPDAEEYTG  230 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhh-hcCCCCCCCChHHhhh
Confidence            34999999666665554    444 9999999999999864211     00     0111111 2234678888999988


Q ss_pred             hhHHH
Q 027007          206 SCKFL  210 (229)
Q Consensus       206 ~~~~l  210 (229)
                      ++.|+
T Consensus       231 ~~~~l  235 (262)
T TIGR03325       231 AYVFF  235 (262)
T ss_pred             heeee
Confidence            87775

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08589 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.3e-24  Score=177.16  Aligned_cols=195  Identities=21%  Similarity=0.184  Sum_probs=138.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+++||++++++|+++|++|++++|+ ++.+.    +.. ..++..+++|+++.+++.++++       .+|+|
T Consensus         8 ~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   86 (272)
T PRK08589          8 VAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVL   86 (272)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEE
Confidence            68999999999999999999999999999998 43222    111 1357889999999988876654       47999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....       +.+.+++.+++|+.++..+++++.+.+.  .++||++||...+.+.+.              ..
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  152 (272)
T PRK08589         87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY--------------RS  152 (272)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC--------------Cc
Confidence            999987421       1234667899999999999999887642  259999999876644322              24


Q ss_pred             cHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhH----HHHHHhh---cccceeeeehhhHhhhhhhHH
Q 027007          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGN----LVAKLQW---KKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      .|+.+|+..+.    +++++.++|+++++|+||.+.++.......    .......   ....+.++...+++++.++.|
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  232 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF  232 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHH
Confidence            59999985554    455556679999999999999986421100    0001111   112234566778888887777


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       233 l~  234 (272)
T PRK08589        233 LA  234 (272)
T ss_pred             Hc
Confidence            53

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.92  E-value=5.6e-24  Score=172.17  Aligned_cols=193  Identities=16%  Similarity=0.104  Sum_probs=135.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC---CCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+....   +.+.. ...+.++++|++|.+++.++++       ++|+||
T Consensus        10 ~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   89 (260)
T PRK12823         10 VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLI   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            689999999999999999999999999999974211   01111 1356788999999988766654       589999


Q ss_pred             EeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           71 HTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        71 ~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||...       .+.+++++.+++|+.++..+++.+.+.+   ..++||++||..+++..                ..
T Consensus        90 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------------~~  153 (260)
T PRK12823         90 NNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN----------------RV  153 (260)
T ss_pred             ECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC----------------CC
Confidence            9998521       1234567789999999999988887643   23589999998765321                13


Q ss_pred             cHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch----------hHHHHHHhh--cccceeeeehhhHhhh
Q 027007          141 QYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT----------GNLVAKLQW--KKVDLVKDIFLLERMR  204 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~  204 (229)
                      .|+.+|++.+.+.+    ++.++|+++++++||++++|.....          ..+......  ....++++.+.++|++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  233 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQV  233 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHH
Confidence            49999986665554    4455699999999999999852100          011111111  1123356677888888


Q ss_pred             hhhHHH
Q 027007          205 HSCKFL  210 (229)
Q Consensus       205 ~~~~~l  210 (229)
                      .++.|+
T Consensus       234 ~~~~~l  239 (260)
T PRK12823        234 AAILFL  239 (260)
T ss_pred             HHHHHH
Confidence            887765

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=6.5e-24  Score=173.69  Aligned_cols=161  Identities=20%  Similarity=0.158  Sum_probs=123.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+.    +....+++++++|++|.+++.++++       ++|+|
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l   98 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM   98 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999987543221    1112367899999999999877765       58999


Q ss_pred             EEeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           70 FHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....        +.+++++.+++|+.++.++++++.+.+   ..+++|++||..+.-+.+.              
T Consensus        99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  164 (280)
T PLN02253         99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--------------  164 (280)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------------
Confidence            999987421        123567889999999999999887653   2358999998765322211              


Q ss_pred             cCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCC
Q 027007          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~  175 (229)
                      ...|+.+|.+.+.+++.    +..+|+++++++||.+.++.
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            13499999976666554    44568999999999999875

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=170.43  Aligned_cols=194  Identities=18%  Similarity=0.109  Sum_probs=137.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-------CCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~~a   73 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.+...    ...+.++++|++|.+++.+++       .++|+|||+|
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            36999999999999999999999999999999764321    125788999999999876554       3589999999


Q ss_pred             cccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           74 ALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        74 ~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |...        .+.+++++.+++|+.++.++++++.+++   ..++||++||..++.+...             ....|
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------------~~~~Y  152 (260)
T PRK06523         86 GGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE-------------STTAY  152 (260)
T ss_pred             cccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC-------------Ccchh
Confidence            8531        1224577889999999999998887653   2358999999876543210             12459


Q ss_pred             HHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhH------------HHHHHhh-cccceeeeehhhHhhhh
Q 027007          143 ERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGN------------LVAKLQW-KKVDLVKDIFLLERMRH  205 (229)
Q Consensus       143 ~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~  205 (229)
                      +.+|...+.+.    +++.++|+++++++||.+.+|.......            ....+.. ....+.++...+++++.
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            99999665554    4455679999999999999986421110            0000000 01123456677888887


Q ss_pred             hhHHHH
Q 027007          206 SCKFLT  211 (229)
Q Consensus       206 ~~~~l~  211 (229)
                      ++.|+-
T Consensus       233 ~~~~l~  238 (260)
T PRK06523        233 LIAFLA  238 (260)
T ss_pred             HHHHHh
Confidence            776664

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=3.6e-24  Score=172.95  Aligned_cols=195  Identities=17%  Similarity=0.177  Sum_probs=137.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++++||||+|+||++++++|+++|++|+++.++.+. .+.+.. .++.++++|++|++++.++++       ++|+||||
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~   86 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNN   86 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            368999999999999999999999999988775432 112211 146789999999999877654       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++..+++.+.+.+   ..++||++||..+++....             ....|+
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~Y~  153 (255)
T PRK06463         87 AGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE-------------GTTFYA  153 (255)
T ss_pred             CCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC-------------CccHhH
Confidence            987321      223567889999999999888877643   2359999999877643210             124599


Q ss_pred             HHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCc---hhH--HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          144 RSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLT---TGN--LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .||++.+.+    +.++.++|+++++++||++.++....   ...  ...... ....+.++...+++++..+.|+
T Consensus       154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK06463        154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELF-RNKTVLKTTGKPEDIANIVLFL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHH-HhCCCcCCCcCHHHHHHHHHHH
Confidence            999855544    45555679999999999998875321   110  111111 1223456677888888777775

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2.9e-24  Score=175.20  Aligned_cols=195  Identities=16%  Similarity=0.151  Sum_probs=139.1

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+  ++||++++++|+++|++|+++.|+..   +++.+... .....+++|++|.++++++++       ++|+
T Consensus        12 ~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   91 (272)
T PRK08159         12 RGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDF   91 (272)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            58999997  89999999999999999998887631   22222111 234568999999999877654       4899


Q ss_pred             EEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||||....          +.++|++.+++|+.++.++++.+.+.+. .++||++||..+..+.+.             
T Consensus        92 lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~-------------  158 (272)
T PRK08159         92 VVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH-------------  158 (272)
T ss_pred             EEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc-------------
Confidence            9999997421          2235778899999999999999988753 359999998755432221             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHH--HHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNL--VAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ...|+.||+    +++.++.++.++|+++++|+||.+.++.......+  ..... ....+.++...|+|++.++.||-
T Consensus       159 -~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~p~~r~~~peevA~~~~~L~  236 (272)
T PRK08159        159 -YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWN-EYNAPLRRTVTIEEVGDSALYLL  236 (272)
T ss_pred             -chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHH-HhCCcccccCCHHHHHHHHHHHh
Confidence             245999999    45566666777899999999999988743211111  11111 11234567888999998888874

>PRK12742 oxidoreductase; Provisional

Probab=99.92  E-value=3.5e-24  Score=170.96  Aligned_cols=194  Identities=20%  Similarity=0.214  Sum_probs=137.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~   77 (229)
                      ++|||||+|+||++++++|+++|++|+++.++ .++.+++.....++++.+|++|.+++.++++   ++|+|||+||...
T Consensus         8 ~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~   87 (237)
T PRK12742          8 KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAV   87 (237)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCC
Confidence            69999999999999999999999999888764 2222222111245678899999988877654   4899999998632


Q ss_pred             C------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeee-cCCCcccCCCCccccccccCcHHHHHHHH
Q 027007           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      .      +.+++++.+++|+.++.++++.+.+.+. .+++|++||..+.. +.+              ....|+.+|+..
T Consensus        88 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~~Y~~sKaa~  153 (237)
T PRK12742         88 FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVA--------------GMAAYAASKSAL  153 (237)
T ss_pred             CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCC--------------CCcchHHhHHHH
Confidence            1      2235778999999999999988877642 35999999975421 111              124599999966


Q ss_pred             HHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          150 DKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       150 e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.+++    ++.++|+++++|+||.+.++........ .... ....+.++...|++++..+.|+-
T Consensus       154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~~~~-~~~~~~~~~~~p~~~a~~~~~l~  217 (237)
T PRK12742        154 QGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM-KDMM-HSFMAIKRHGRPEEVAGMVAWLA  217 (237)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHH-HHHH-HhcCCCCCCCCHHHHHHHHHHHc
Confidence            65554    4456689999999999999864332221 1111 12223456778888888776653

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.3e-24  Score=172.01  Aligned_cols=196  Identities=17%  Similarity=0.118  Sum_probs=142.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC---CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS---EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~---~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+++||++++++|+++|++|++++|+.++.+..    ..   ...+..+.+|++|.+++.++++       .+|
T Consensus        10 ~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   89 (265)
T PRK07062         10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVD   89 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999999999987543321    11   1257788999999998866543       579


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      ..++|.+.+++|+.++..+++.+.+.+.   .++||++||..++.+.+.              
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  155 (265)
T PRK07062         90 MLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH--------------  155 (265)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC--------------
Confidence            99999996321      2235778899999999999998877542   359999999877654322              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-----------hHHHHHHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-----------GNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ...|+.+|+    +++.++.++.++|+++++++||.+.+|.....           ..+..........+.++.+.|+++
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~v  235 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEA  235 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHH
Confidence            134999998    45566667777899999999999998853110           011111111122345678889999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.+..||-
T Consensus       236 a~~~~~L~  243 (265)
T PRK07062        236 ARALFFLA  243 (265)
T ss_pred             HHHHHHHh
Confidence            88887763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-24  Score=173.31  Aligned_cols=195  Identities=17%  Similarity=0.063  Sum_probs=140.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    .. ...+..+.+|++|.+++.++++       ++|+|
T Consensus        11 ~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   90 (254)
T PRK08085         11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVL   90 (254)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            589999999999999999999999999999986543321    11 1356778999999998877653       48999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+||...      .+.++|++.+++|+.++.++++++.+.+   ..++||++||..+..+...              ..
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  156 (254)
T PRK08085         91 INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT--------------IT  156 (254)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC--------------Cc
Confidence            99998632      1234677889999999999999887653   2358999999755432211              24


Q ss_pred             cHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|...+.+++.    +.++|+++++|+||++.++......  ......... ..+..+++.++|++.++.|+-
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~va~~~~~l~  232 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCK-RTPAARWGDPQELIGAAVFLS  232 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            599999966655544    5567999999999999998643211  111111222 234567888999988776654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.91  E-value=2.7e-24  Score=175.74  Aligned_cols=196  Identities=20%  Similarity=0.199  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.    . ..++.++++|++|.+++.++++       ++|+|
T Consensus        12 ~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (278)
T PRK08277         12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDIL   91 (278)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999764432211    1 1357889999999988876653       68999


Q ss_pred             EEeCcccCC---------------------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCc
Q 027007           70 FHTAALVEP---------------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        70 i~~a~~~~~---------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~  125 (229)
                      |||||....                     ..+++++.+++|+.++..+++.+.+.+   ..++||++||..++.+.+. 
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-  170 (278)
T PRK08277         92 INGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK-  170 (278)
T ss_pred             EECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC-
Confidence            999985311                     123467789999999999988877653   2358999999987754332 


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh-------HHHHHHhhccccee
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG-------NLVAKLQWKKVDLV  194 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~-------~~~~~~~~~~~~~~  194 (229)
                                   ...|+.+|+..+.++    .++.++|+++++|+||.+.+|......       ......+. ...+.
T Consensus       171 -------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~p~  236 (278)
T PRK08277        171 -------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKIL-AHTPM  236 (278)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHh-ccCCc
Confidence                         244999999655555    455566999999999999998532110       00111111 22345


Q ss_pred             eeehhhHhhhhhhHHHHH
Q 027007          195 KDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       195 ~~~~~~~~~~~~~~~l~~  212 (229)
                      ++++.++|++.++.||-.
T Consensus       237 ~r~~~~~dva~~~~~l~s  254 (278)
T PRK08277        237 GRFGKPEELLGTLLWLAD  254 (278)
T ss_pred             cCCCCHHHHHHHHHHHcC
Confidence            778899999999888643

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-24  Score=176.52  Aligned_cols=159  Identities=23%  Similarity=0.163  Sum_probs=122.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|+++.|+++..+.+..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (276)
T PRK06482          4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSN   83 (276)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999999998654333211  1367889999999998877653       48999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..+..+.+              ..+.|+
T Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y~  149 (276)
T PRK06482         84 AGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP--------------GFSLYH  149 (276)
T ss_pred             CCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC--------------CCchhH
Confidence            997422      123456789999999999999986542   346999999976543221              125699


Q ss_pred             HHHHHHHHHHHHHH----hcCCCeEEEecCceecC
Q 027007          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       144 ~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~  174 (229)
                      .+|+..+.+++.++    ++|++++++|||.+.++
T Consensus       150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~  184 (276)
T PRK06482        150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTN  184 (276)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccC
Confidence            99998877776554    45999999999998443

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-24  Score=170.91  Aligned_cols=179  Identities=21%  Similarity=0.160  Sum_probs=133.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC----CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~~   76 (229)
                      ||++||||+|+||++++++|+++|++|++++|+.++.+.......++.+++|++|.+++.++++    ++|++||||+..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            8999999999999999999999999999999986554332221245688999999999887765    589999999741


Q ss_pred             ----CC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           77 ----EP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        77 ----~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                          .+       ..++|++.+++|+.++.++++++.+.+. .++||++||...    ..              ...|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~--------------~~~Y~a  142 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----PA--------------GSAEAA  142 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----CC--------------ccccHH
Confidence                00       2245778899999999999999988653 358999998641    00              135999


Q ss_pred             HHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      +|+    +++.++.++.++|+++++|.||.+.+|...       ..  ...    +...++|++.+..|+
T Consensus       143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-------~~--~~~----p~~~~~~ia~~~~~l  199 (223)
T PRK05884        143 IKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-------GL--SRT----PPPVAAEIARLALFL  199 (223)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-------hc--cCC----CCCCHHHHHHHHHHH
Confidence            999    445555666677999999999999877421       00  111    123677887777775

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.4e-24  Score=172.12  Aligned_cols=158  Identities=22%  Similarity=0.209  Sum_probs=125.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      +++||||+|+||++++++|+++|++|++++|++++....   .+++++++|++|++++.++++       .+|+||||||
T Consensus         6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            599999999999999999999999999999986554332   367889999999999887765       4799999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+.+.              ...|+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~~s  148 (270)
T PRK06179         83 VGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY--------------MALYAAS  148 (270)
T ss_pred             CCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC--------------ccHHHHH
Confidence            7422      223567889999999999999976542   3469999999877654322              2459999


Q ss_pred             HHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          146 KAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       146 K~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      |...+.+.+    ++.++|+++++++||++.++..
T Consensus       149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~  183 (270)
T PRK06179        149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD  183 (270)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence            996665554    4456799999999999998853

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.7e-23  Score=169.40  Aligned_cols=195  Identities=15%  Similarity=0.079  Sum_probs=138.5

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCC---CCCCC---CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLP---SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      +++||||+  ++||++++++|+++|++|++.+|+...   ++++.   ...++..+++|++|.+++.++++       ++
T Consensus         9 ~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~l   88 (257)
T PRK08594          9 TYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVI   88 (257)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCc
Confidence            58999997  899999999999999999999875321   11111   12357789999999998876653       48


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |++|||||....          +.++|.+.+++|+.++..+++++.+.+. .++||++||..+..+.+.           
T Consensus        89 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----------  157 (257)
T PRK08594         89 HGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-----------  157 (257)
T ss_pred             cEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC-----------
Confidence            999999986321          1224667789999999999999988753 259999999865433221           


Q ss_pred             ccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH--HHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN--LVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.||+    +++.++.++.++|+++++|+||.+.++.......  ....... ...+.++...|++++.++.|
T Consensus       158 ---~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~~va~~~~~  233 (257)
T PRK08594        158 ---YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIE-ERAPLRRTTTQEEVGDTAAF  233 (257)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHh-hcCCccccCCHHHHHHHHHH
Confidence               235999999    5556666677789999999999999875321111  1111111 12235667888888888777


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       234 l~  235 (257)
T PRK08594        234 LF  235 (257)
T ss_pred             Hc
Confidence            64

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.91  E-value=5.3e-24  Score=171.10  Aligned_cols=195  Identities=16%  Similarity=0.148  Sum_probs=139.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-C-CCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-I-SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      ++|||||+|+||++++++|+++|++|++++|+... . +.+.. ...+..+++|+++.+++.++++       ++|+|||
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~   86 (248)
T TIGR01832         7 VALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVN   86 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            69999999999999999999999999999986421 1 11111 1357889999999998876553       5899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||....      ..+++++.+++|+.++.++++++.+.+   . .+++|++||..++.+...              ...
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~  152 (248)
T TIGR01832        87 NAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--------------VPS  152 (248)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC--------------Cch
Confidence            9997432      223567789999999999999987642   1 358999999877754322              134


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.+|++.+.+++.    +.++|+++++++||.+.++.....  ........... .+.++...+++++.++.|+-
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  227 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER-IPAGRWGTPDDIGGPAVFLA  227 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            99999966655544    445699999999999999864211  11111111222 23456778888888877653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=5.1e-24  Score=171.39  Aligned_cols=161  Identities=23%  Similarity=0.300  Sum_probs=124.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      |+++||||+|+||++++++|+++|++|++++|++++.+.+..  ...++++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            899999999999999999999999999999998764433211  1357889999999998876654       6899999


Q ss_pred             eCcccC---C----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      +||...   +    +.+++++.+++|+.++..+++.+.+++   ..+++|++||..+..+...              ...
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  146 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------GNV  146 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC--------------Cch
Confidence            998631   1    223566789999999999988887643   2458999999765432211              245


Q ss_pred             HHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      |+.+|.+.+.+++.++    +.++++++++||.+.|+.
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            9999997777766554    468999999999998664

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=5.9e-24  Score=171.96  Aligned_cols=194  Identities=16%  Similarity=0.140  Sum_probs=139.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+ ++.+.+    . ....+.++++|+++.+++.++++       .+|++
T Consensus        17 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   95 (258)
T PRK06935         17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL   95 (258)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999987 322211    1 11357889999999998877765       57999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+||....      ..+++++.+++|+.++..+++++.+.+   ..+++|++||..++.+.+.              ..
T Consensus        96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  161 (258)
T PRK06935         96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF--------------VP  161 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC--------------ch
Confidence            999987321      223577789999999999999887653   2358999999877654322              23


Q ss_pred             cHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|.+.+.+    ++++.++|+++++|+||.+.++.....  ........... .+.++...++|++..+.|+-
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  237 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR-IPAGRWGEPDDLMGAAVFLA  237 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc-CCCCCCCCHHHHHHHHHHHc
Confidence            499999955544    555566799999999999999864211  11111112222 23456778888887776654

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7e-24  Score=171.06  Aligned_cols=195  Identities=18%  Similarity=0.127  Sum_probs=137.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC--CCCCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--PSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+....+..  .....+..+++|+++.+++.++++       ++|+|||+
T Consensus        17 ~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~   96 (255)
T PRK06841         17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNS   96 (255)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            699999999999999999999999999999975421110  011246688999999998877654       57999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      ..+++++.+++|+.++.++++++.+.+   ..++||++||..+..+.+.              ...|+
T Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  162 (255)
T PRK06841         97 AGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER--------------HVAYC  162 (255)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC--------------CchHH
Confidence            997421      223566789999999999999987653   2459999999865433222              23499


Q ss_pred             HHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          144 RSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .+|.+.+    .+++++.++|++++.|+||.+.++.............+....+.+++..+++++.++.|+
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFL  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999655    445555567999999999999998642211000111112223356677888888776654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.91  E-value=3.5e-23  Score=172.39  Aligned_cols=170  Identities=26%  Similarity=0.356  Sum_probs=133.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-CC---CCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG---LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      |||||||+|+||++++++|+++|++|++++|..... +.   ......++.+.+|+++.+++.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            689999999999999999999999999887643221 11   1111246788999999999998886  69999999997


Q ss_pred             cCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      ...  ...++.+.++.|+.++.++++++.+.+ .+++|++||...|+.......+|+.+..   +.+.|+.+|..+|.++
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~---~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLG---PINPYGRSKLMSERIL  156 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCC---CCCchHHHHHHHHHHH
Confidence            422  234566789999999999999998874 5799999999888765444445544333   2456999999999999


Q ss_pred             HHHHh--cCCCeEEEecCceecCC
Q 027007          154 LQAAS--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       154 ~~~~~--~gi~~~~irpg~i~g~~  175 (229)
                      +.++.  .+++++++||+.+|||.
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNVAGAD  180 (328)
T ss_pred             HHHHHhccCCCEEEEecCcccCCC
Confidence            88864  58999999999999985

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=8.8e-24  Score=171.11  Aligned_cols=194  Identities=14%  Similarity=0.116  Sum_probs=139.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCCC---CCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+  ++||++++++|+++|++|++++|+.+..   +++... ..+.++++|++|.+++.++++       ++|+
T Consensus        12 ~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~   91 (258)
T PRK07533         12 RGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDF   91 (258)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999998  5999999999999999999999875321   111111 234678999999999876653       5899


Q ss_pred             EEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||||....          +.++|++.+++|+.++.++++.+.+.+.. ++||++||..+..+.+.             
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~-------------  158 (258)
T PRK07533         92 LLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-------------  158 (258)
T ss_pred             EEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc-------------
Confidence            9999986321          22457788999999999999999887632 48999998754322211             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.+|+    +++.++.++.++|+++++|+||.+.++.....   ...... .. ...++++...|+|++.++.||
T Consensus       159 -~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~-~~-~~~p~~r~~~p~dva~~~~~L  235 (258)
T PRK07533        159 -YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLED-AA-ERAPLRRLVDIDDVGAVAAFL  235 (258)
T ss_pred             -chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHH-HH-hcCCcCCCCCHHHHHHHHHHH
Confidence             245999999    45566666777899999999999998853211   111111 11 223456778899998888777


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       236 ~  236 (258)
T PRK07533        236 A  236 (258)
T ss_pred             h
Confidence            4

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.91  E-value=1.7e-23  Score=168.89  Aligned_cols=196  Identities=15%  Similarity=0.128  Sum_probs=141.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +++||||+|+||++++++|+++|++|+++++....  .+.+.. ...+..+++|++|.+++.++++       ++|++||
T Consensus        12 ~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~   91 (253)
T PRK08993         12 VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVN   91 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            58999999999999999999999999988775321  111111 1357789999999998877664       5899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||....      +.+++++.+++|+.++.++++++.+.+    ..+++|++||..++.+....              ..
T Consensus        92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~  157 (253)
T PRK08993         92 NAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV--------------PS  157 (253)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC--------------cc
Confidence            9997421      224678899999999999999987653    12589999998877543321              34


Q ss_pred             HHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          142 YERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       142 Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |+.+|++.+    .++.++.++|++++.++||.+.++.....  .....+...... +.++...|++++..+.|+-.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~-p~~r~~~p~eva~~~~~l~s  233 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI-PAGRWGLPSDLMGPVVFLAS  233 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcC-CCCCCcCHHHHHHHHHHHhC
Confidence            999999654    45555666799999999999999864211  111111222333 35677889999988877653

>PRK08643 acetoin reductase; Validated

Probab=99.91  E-value=9.8e-24  Score=170.39  Aligned_cols=161  Identities=22%  Similarity=0.261  Sum_probs=122.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.    . ...+.++++|++|++++.++++       ++|+|
T Consensus         4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   83 (256)
T PRK08643          4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVV   83 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999865432211    1 1357789999999998876654       58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.+++++.+++|+.++..+++.+.+.+    ..+++|++||..++.+.++              .
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  149 (256)
T PRK08643         84 VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE--------------L  149 (256)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC--------------C
Confidence            999986321      123466789999999999988887642    1258999999765543221              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...+.++    .++.++|+++++|+||++.+|..
T Consensus       150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  190 (256)
T PRK08643        150 AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMM  190 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhh
Confidence            45999999655544    45556799999999999999853

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-23  Score=173.24  Aligned_cols=194  Identities=18%  Similarity=0.208  Sum_probs=139.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      |++|||||+|+||++++++|+++|++|++++|+... .+.    +.. ...+.++.+|++|.+++.++++       ++|
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD  126 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLD  126 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999987532 111    111 1357789999999998877664       579


Q ss_pred             EEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||+|+....       +.+++.+.+++|+.++.++++++.+.+ ..+++|++||..++.+.+.              .
T Consensus       127 ~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~--------------~  192 (290)
T PRK06701        127 ILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET--------------L  192 (290)
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC--------------c
Confidence            99999986321       223456789999999999999998754 2359999999887755432              1


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+++.+    .++|+++++|+||.++++.....  .......  ......++...+++++.++.|+
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQF--GSNTPMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHH--HhcCCcCCCcCHHHHHHHHHHH
Confidence            34999999666655554    45699999999999999864221  1111111  1223345667788887776554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=8.2e-24  Score=171.63  Aligned_cols=195  Identities=14%  Similarity=0.141  Sum_probs=136.8

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||++  +||++++++|+++|++|++.+|+..   ..+++.. .+.+..+++|++|++++.++++       ++|+
T Consensus         8 ~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   87 (262)
T PRK07984          8 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDG   87 (262)
T ss_pred             EEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCE
Confidence            589999985  9999999999999999999988631   1111211 1245678999999999877653       4799


Q ss_pred             EEEeCcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +|||||....           +.++|++.+++|+.++..+.+++.+.+. .++||++||..+..+.+.            
T Consensus        88 linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~------------  155 (262)
T PRK07984         88 FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------------  155 (262)
T ss_pred             EEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC------------
Confidence            9999986321           1234667789999999999998876532 258999998765432222            


Q ss_pred             cccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHh--hcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQ--WKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.||.    +++.++.+++++||++++|.||.+.++.......+ ....  .....+.++...|+|++.++.|+
T Consensus       156 --~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~~~~L  232 (262)
T PRK07984        156 --YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-RKMLAHCEAVTPIRRTVTIEDVGNSAAFL  232 (262)
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch-HHHHHHHHHcCCCcCCCCHHHHHHHHHHH
Confidence              235999999    45555566667799999999999988743211111 1111  11223456788999999888776


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       233 ~  233 (262)
T PRK07984        233 C  233 (262)
T ss_pred             c
Confidence            3

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.91  E-value=6e-24  Score=172.38  Aligned_cols=194  Identities=21%  Similarity=0.171  Sum_probs=140.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus         8 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   87 (263)
T PRK06200          8 VALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGN   87 (263)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999999999999998654433211  1256788999999998876654       58999999


Q ss_pred             CcccCC-------CCC----CchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           73 AALVEP-------WLP----DPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        73 a~~~~~-------~~~----~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||....       +.+    .|++.+++|+.++..+++++.+.+.  .+++|++||..++.+..+.              
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  153 (263)
T PRK06200         88 AGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG--------------  153 (263)
T ss_pred             CCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC--------------
Confidence            996321       111    1667899999999999999987542  3589999998776543321              


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh-----------HHHHHHhhcccceeeeehhhHhhh
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG-----------NLVAKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  204 (229)
                      ..|+.+|...+.+++.    +++ ++++++|.||.+.++......           ....... ....++++...|+|++
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~~~eva  231 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMI-AAITPLQFAPQPEDHT  231 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHh-hcCCCCCCCCCHHHHh
Confidence            3499999966555544    444 599999999999988532100           0011111 2233567788899999


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.||-
T Consensus       232 ~~~~fl~  238 (263)
T PRK06200        232 GPYVLLA  238 (263)
T ss_pred             hhhhhee
Confidence            8888764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=6.8e-24  Score=170.54  Aligned_cols=194  Identities=20%  Similarity=0.142  Sum_probs=138.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++|||||+|+||++++++|+++|++|++++|++++.+.+    .....+.++++|++|++++.++++       ++|+|
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   85 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL   85 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3799999999999999999999999999999987543321    112357889999999999977664       57999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||+|+....       +.+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+.+.              .
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  151 (251)
T PRK07231         86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG--------------L  151 (251)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC--------------c
Confidence            999986321       223567789999999999999887643   3468999999877754332              2


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh-----HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG-----NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+++.    +.++|+++++++||.+.++......     ..... +. ...+..++..+++++.+..++
T Consensus       152 ~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~dva~~~~~l  229 (251)
T PRK07231        152 GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAK-FL-ATIPLGRLGTPEDIANAALFL  229 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHH-Hh-cCCCCCCCcCHHHHHHHHHHH
Confidence            4599999866655554    4455999999999999887632211     11111 11 122334556677776655553

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=6.3e-24  Score=172.23  Aligned_cols=195  Identities=14%  Similarity=0.102  Sum_probs=137.9

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||  +++||++++++|+++|++|++.+|...   ..+++... .....+++|++|+++++++++       ++|+
T Consensus         8 ~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   87 (261)
T PRK08690          8 KILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDG   87 (261)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            5899997  679999999999999999999876531   11122111 234578999999999877653       5899


Q ss_pred             EEEeCcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      +|||||....           +.++|+..+++|+.++..+.+.+.+.+.  .++||++||..+..+.++           
T Consensus        88 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~-----------  156 (261)
T PRK08690         88 LVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN-----------  156 (261)
T ss_pred             EEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC-----------
Confidence            9999997421           1124566789999999999998877642  258999998876543222           


Q ss_pred             ccccCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.+|..    ++.++.++.++|+++++|.||.+.++......  .-....... ..+.++.+.|+|++.++.|
T Consensus       157 ---~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~-~~p~~r~~~peevA~~v~~  232 (261)
T PRK08690        157 ---YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAA-HNPLRRNVTIEEVGNTAAF  232 (261)
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhh-cCCCCCCCCHHHHHHHHHH
Confidence               2449999984    45556667788999999999999998532111  111111222 2346778899999988887


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       233 l~  234 (261)
T PRK08690        233 LL  234 (261)
T ss_pred             Hh
Confidence            64

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=170.25  Aligned_cols=194  Identities=20%  Similarity=0.165  Sum_probs=140.0

Q ss_pred             EEEEEcCCC-hHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      +++||||+| +||+++++.|+++|++|++++|+.++.+..    .   ....+..+++|+++.+++.++++       .+
T Consensus        19 ~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   98 (262)
T PRK07831         19 VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRL   98 (262)
T ss_pred             EEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999997 799999999999999999999876543321    1   11257789999999998876654       57


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |+||||||....      +.+++.+.+++|+.++..+++++.+.+   . .++||++||..++.+...            
T Consensus        99 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------------  166 (262)
T PRK07831         99 DVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG------------  166 (262)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC------------
Confidence            999999996321      224577789999999999999987643   1 358999998765533221            


Q ss_pred             cccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCc--hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.+|++.+.+++.    +.++|+++++|+||.+++|....  ....... +.. ..+.++...|++++..+.|+
T Consensus       167 --~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~-~~~-~~~~~r~~~p~~va~~~~~l  242 (262)
T PRK07831        167 --QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE-LAA-REAFGRAAEPWEVANVIAFL  242 (262)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH-HHh-cCCCCCCcCHHHHHHHHHHH
Confidence              24599999966666554    44679999999999999986422  1122222 222 23456788899998887775


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       243 ~  243 (262)
T PRK07831        243 A  243 (262)
T ss_pred             c
Confidence            4

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-23  Score=189.77  Aligned_cols=170  Identities=29%  Similarity=0.420  Sum_probs=130.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHH--HCCCeEEEEEcCCCC--CCCC---CCCCCeEEEEccCCCh------hhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALL--KQGHSVRALVRRTSD--ISGL---PSEGALELVYGDVTDY------RSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~--~~g~~V~~~~r~~~~--~~~~---~~~~~~~~~~~D~~~~------~~~~~~~~~~d   67 (229)
                      |+|||||||||||++++++|+  ++|++|++++|+...  ...+   ....+++++.+|++|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            899999999999999999999  578999999996432  1111   0113688999999984      455555 8899


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      +|||+|+..... .......++|+.++.++++++.+.+ .+++||+||..+|+...+.. +|+....+..+.+.|+.+|.
T Consensus        80 ~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~-~e~~~~~~~~~~~~Y~~sK~  156 (657)
T PRK07201         80 HVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVF-REDDFDEGQGLPTPYHRTKF  156 (657)
T ss_pred             EEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCcc-ccccchhhcCCCCchHHHHH
Confidence            999999975433 3456788999999999999998874 67999999999998654332 33322222233467999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          148 VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       148 ~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+|.++++  ..+++++++||+.+|||..
T Consensus       157 ~~E~~~~~--~~g~~~~ilRp~~v~G~~~  183 (657)
T PRK07201        157 EAEKLVRE--ECGLPWRVYRPAVVVGDSR  183 (657)
T ss_pred             HHHHHHHH--cCCCcEEEEcCCeeeecCC
Confidence            99999875  3589999999999999854

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=2.9e-23  Score=167.16  Aligned_cols=192  Identities=21%  Similarity=0.181  Sum_probs=138.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.  ...  ....+.++++|++|.+++.++++       ++|+||||++
T Consensus        10 ~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   85 (252)
T PRK08220         10 TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAG   85 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999976  111  12357889999999999887765       3799999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.+++.+.+++|+.++.++++++.+.+   ..++||++||.....+...              ...|+.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------~~~Y~~s  151 (252)
T PRK08220         86 ILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG--------------MAAYGAS  151 (252)
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC--------------CchhHHH
Confidence            7422      223567789999999999999987643   2358999999765433221              2459999


Q ss_pred             HHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh--HHH-HHH------hhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG--NLV-AKL------QWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~--~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |...+.+.+.    +.++|+++++++||.+++|......  ... ...      ......+..+...++|++.+..|+-
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  230 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA  230 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh
Confidence            9966666544    4457999999999999998642210  000 000      0111223456778888887776654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.9e-23  Score=164.79  Aligned_cols=191  Identities=21%  Similarity=0.266  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcCCccEEEEeCcccC---
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVE---   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~~a~~~~---   77 (229)
                      +++||||+|+||++++++|+++|++|++++|+.....    ..++.++.+|+++. +++.+.+.++|+|||+||...   
T Consensus         7 ~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~   82 (235)
T PRK06550          7 TVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYK   82 (235)
T ss_pred             EEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCC
Confidence            6899999999999999999999999999999754321    13578899999987 555555667999999998632   


Q ss_pred             C----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           78 P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        78 ~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      .    +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.+|...+
T Consensus        83 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~a~~  148 (235)
T PRK06550         83 PLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------GAAYTASKHALA  148 (235)
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------CcccHHHHHHHH
Confidence            1    223567789999999999999987643   2358999999876643322              234999998554


Q ss_pred             ----HHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          151 ----KIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       151 ----~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                          .++.++.++|+++++++||++.+|.....  .....+... ...+..+...+++++.++.|+-
T Consensus       149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~  214 (235)
T PRK06550        149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVA-RETPIKRWAEPEEVAELTLFLA  214 (235)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHh-ccCCcCCCCCHHHHHHHHHHHc
Confidence                45555666799999999999999864221  111111111 2234566778888888877764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=7.4e-24  Score=171.76  Aligned_cols=195  Identities=13%  Similarity=0.108  Sum_probs=137.8

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCC---CCCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT---SDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||  +++||++++++|+++|++|++++|..   ++++.+... +....+++|++|++++.++++       ++|+
T Consensus         8 ~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (260)
T PRK06997          8 RILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDG   87 (260)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            5899996  67999999999999999999886542   222221111 123468899999999877664       5899


Q ss_pred             EEEeCcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +|||||....           +.++|++.+++|+.++..+++++.+.+. .++||++||..+..+.+.            
T Consensus        88 lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~------------  155 (260)
T PRK06997         88 LVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN------------  155 (260)
T ss_pred             EEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC------------
Confidence            9999987421           1235677899999999999999988763 358999998765432211            


Q ss_pred             cccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.||+    +++.++++++++|++++.|.||.+.++......  ....+..... .+.++.+.|+|++.++.|+
T Consensus       156 --~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedva~~~~~l  232 (260)
T PRK06997        156 --YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN-APLRRNVTIEEVGNVAAFL  232 (260)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc-CcccccCCHHHHHHHHHHH
Confidence              245999998    556666777778999999999999887532111  1111111122 2456778899999888876


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       233 ~  233 (260)
T PRK06997        233 L  233 (260)
T ss_pred             h
Confidence            3

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=7.3e-24  Score=170.62  Aligned_cols=196  Identities=18%  Similarity=0.158  Sum_probs=136.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCCCC--CCCeEEEEccCCChhhHHhhcCC--------ccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDACFG--------CHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--------~d~vi   70 (229)
                      +++||||+|+||+++++.|+++|++|++..++. ++.+.+..  ..++.++++|++|++++.++++.        +|++|
T Consensus         7 ~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li   86 (253)
T PRK08642          7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVV   86 (253)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence            689999999999999999999999998876542 22111110  13577899999999988776642        89999


Q ss_pred             EeCcccC-------C-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           71 HTAALVE-------P-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        71 ~~a~~~~-------~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |+|+...       .     +.+++.+.+++|+.++.++++++.+.+   ..+++|++||.....+..            
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------  154 (253)
T PRK08642         87 NNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVV------------  154 (253)
T ss_pred             ECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------
Confidence            9997521       0     113456779999999999999997643   235899999865432211            


Q ss_pred             ccccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCc-hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT-TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        +...|+.+|...+.+++.++    ++|++++.|+||.+.++.... ........... ..+..+...+++++.++.|+
T Consensus       155 --~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l  231 (253)
T PRK08642        155 --PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAA-TTPLRKVTTPQEFADAVLFF  231 (253)
T ss_pred             --CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHh-cCCcCCCCCHHHHHHHHHHH
Confidence              12459999997777776654    468999999999998874221 11111122222 23356778888888887776


Q ss_pred             HH
Q 027007          211 TW  212 (229)
Q Consensus       211 ~~  212 (229)
                      -.
T Consensus       232 ~~  233 (253)
T PRK08642        232 AS  233 (253)
T ss_pred             cC
Confidence            53

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.91  E-value=5.2e-23  Score=171.39  Aligned_cols=150  Identities=25%  Similarity=0.318  Sum_probs=121.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |||+|||||||+|++++++|+++|++|++++|+.++...+.. .+++++++|++|++++.++++++|+|||+++..   .
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~---~   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR---P   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC---C
Confidence            899999999999999999999999999999998654332222 368899999999999999999999999987632   2


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                      .++....++|+.++.++++++...+ .+++|++||..+....                ...|..+|..+|.+++.   .+
T Consensus        77 ~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~~----------------~~~~~~~K~~~e~~l~~---~~  136 (317)
T CHL00194         77 SDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQYP----------------YIPLMKLKSDIEQKLKK---SG  136 (317)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccccC----------------CChHHHHHHHHHHHHHH---cC
Confidence            3445678899999999999999885 7899999985332100                12388899988887654   58


Q ss_pred             CCeEEEecCceecC
Q 027007          161 LPIVPVYPGVIYGP  174 (229)
Q Consensus       161 i~~~~irpg~i~g~  174 (229)
                      ++++++||+.+|+.
T Consensus       137 l~~tilRp~~~~~~  150 (317)
T CHL00194        137 IPYTIFRLAGFFQG  150 (317)
T ss_pred             CCeEEEeecHHhhh
Confidence            99999999988864

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.91  E-value=5.2e-24  Score=172.45  Aligned_cols=194  Identities=13%  Similarity=0.131  Sum_probs=138.7

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCC------CCCCCCC-CCeEEEEccCCChhhHHhhcC-------C
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSE-GALELVYGDVTDYRSLVDACF-------G   65 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~------~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~   65 (229)
                      +++||||+  ++||++++++|+++|++|++..|+.++      .+++... ..+.++++|++|++++.++++       +
T Consensus         8 ~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (258)
T PRK07370          8 KALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGK   87 (258)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCC
Confidence            58999986  899999999999999999988765321      1111111 245688999999999876654       5


Q ss_pred             ccEEEEeCcccC------C----CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccc
Q 027007           66 CHVIFHTAALVE------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        66 ~d~vi~~a~~~~------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      +|++|||||...      +    +.++|++.+++|+.++..+++++.+.+. .++||++||..+..+.+.          
T Consensus        88 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------  157 (258)
T PRK07370         88 LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN----------  157 (258)
T ss_pred             CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc----------
Confidence            899999999642      1    2245778899999999999999988653 259999999765433221          


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                          ...|+.+|+    +++.++.++.++|+++++|.||.+.++.....   .... ... ....+.++.+.++|++.+.
T Consensus       158 ----~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~-~~~-~~~~p~~r~~~~~dva~~~  231 (258)
T PRK07370        158 ----YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMI-HHV-EEKAPLRRTVTQTEVGNTA  231 (258)
T ss_pred             ----cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhh-hhh-hhcCCcCcCCCHHHHHHHH
Confidence                245999998    45555566667799999999999999853211   1111 111 1223456788899999888


Q ss_pred             HHHH
Q 027007          208 KFLT  211 (229)
Q Consensus       208 ~~l~  211 (229)
                      .|+-
T Consensus       232 ~fl~  235 (258)
T PRK07370        232 AFLL  235 (258)
T ss_pred             HHHh
Confidence            8864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=169.98  Aligned_cols=161  Identities=19%  Similarity=0.165  Sum_probs=119.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.++.    .. ...+.++++|++|.+++.++++       ++|+|
T Consensus         9 ~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   88 (262)
T PRK13394          9 TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDIL   88 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999987543221    11 1256789999999998876654       48999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||+....      ..+++++.+++|+.++..+++.+.+.+    ..++||++||..++.+.+.              .
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~  154 (262)
T PRK13394         89 VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL--------------K  154 (262)
T ss_pred             EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC--------------C
Confidence            999987421      223466778999999766665554332    3569999999765533211              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.|+.+|...+.+++.+    .+.++++++++||.+++|..
T Consensus       155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~  195 (262)
T PRK13394        155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLV  195 (262)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhh
Confidence            45999999766666554    34689999999999999863

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=1.5e-23  Score=167.43  Aligned_cols=192  Identities=20%  Similarity=0.192  Sum_probs=136.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-CCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++... +.. .+++++.+|++|.+++.++++       .+|++||||
T Consensus         4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a   82 (236)
T PRK06483          4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ-AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA   82 (236)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence            69999999999999999999999999999997643211 111 246788999999988866543       489999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |....      +.+++++.+++|+.++..+.+.+.+.+.     .+++|++||.....+.+.              ...|
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------~~~Y  148 (236)
T PRK06483         83 SDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK--------------HIAY  148 (236)
T ss_pred             ccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC--------------CccH
Confidence            86321      2345778899999999999988877531     258999998765433221              2459


Q ss_pred             HHHHHHHHHHHHHHHh---cCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~---~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.+|+..+.+++.++.   .++++++|+||++..+... .... .+..... .++.+...++|++.++.|+-
T Consensus       149 ~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~va~~~~~l~  217 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-DAAY-RQKALAK-SLLKIEPGEEEIIDLVDYLL  217 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-CHHH-HHHHhcc-CccccCCCHHHHHHHHHHHh
Confidence            9999977777665542   2599999999998765321 1111 1112222 23556778889988887764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=168.79  Aligned_cols=195  Identities=18%  Similarity=0.147  Sum_probs=136.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhc-------CCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDAC-------FGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|++|++++|+.+..+.+..  ...+.++++|++|.+++.+++       .++|+|||+
T Consensus         8 ~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (249)
T PRK06500          8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFIN   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999999999997544332211  125778899999988775543       358999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ||....      +.+++++.+++|+.++.++++++.+.+ ...++|++||..+..+.+.              .+.|+.+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~--------------~~~Y~~s  153 (249)
T PRK06500         88 AGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN--------------SSVYAAS  153 (249)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC--------------ccHHHHH
Confidence            986321      224567889999999999999998753 2347888887654322111              2459999


Q ss_pred             HHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch---h---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT---G---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |...+.+++.+    .++|+++++++||.+++|.....   .   ....+.+.. ..+..+...+++++.+..|+-
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~  228 (249)
T PRK06500        154 KAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQA-LVPLGRFGTPEEIAKAVLYLA  228 (249)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHc
Confidence            99877777544    45699999999999999853110   0   111111222 223445667777777766653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=168.88  Aligned_cols=194  Identities=18%  Similarity=0.157  Sum_probs=136.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+..+.+....       ...++++.+|++|.+++.++++       ++|
T Consensus         4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   83 (259)
T PRK12384          4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVD   83 (259)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999997654322110       1257889999999988876654       579


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||+||....      ..+++++.+++|+.++.++++++.+.+   . .+++|++||..+..+...             
T Consensus        84 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~-------------  150 (259)
T PRK12384         84 LLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH-------------  150 (259)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC-------------
Confidence            99999986321      223567789999999999999887653   2 359999999654322111             


Q ss_pred             ccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCc-h-hH----------HHHHHhhcccceeeeehhhH
Q 027007          138 FCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLT-T-GN----------LVAKLQWKKVDLVKDIFLLE  201 (229)
Q Consensus       138 ~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~-~-~~----------~~~~~~~~~~~~~~~~~~~~  201 (229)
                       ...|+.+|++.+    .++.++.++|+++++++||.++++.... . ..          .... ......+.++...++
T Consensus       151 -~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  228 (259)
T PRK12384        151 -NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQ-YYIDKVPLKRGCDYQ  228 (259)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHH-HHHHhCcccCCCCHH
Confidence             245999999654    4455555789999999999987754211 0 00          0011 111223456777888


Q ss_pred             hhhhhhHHH
Q 027007          202 RMRHSCKFL  210 (229)
Q Consensus       202 ~~~~~~~~l  210 (229)
                      |+..++.|+
T Consensus       229 dv~~~~~~l  237 (259)
T PRK12384        229 DVLNMLLFY  237 (259)
T ss_pred             HHHHHHHHH
Confidence            888887766

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.91  E-value=1.1e-23  Score=169.25  Aligned_cols=194  Identities=21%  Similarity=0.128  Sum_probs=136.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      |+++||||+|++|++++++|+++|++|++++|+.++...    +.. ...+.++.+|++|.+++.++++       .+|+
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            479999999999999999999999999999998543221    111 1357889999999998888765       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||+++....      +.+++++.++.|+.++.++++++.+.+   +.+++|++||..++ .+..              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~--------------~  152 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYP--------------G  152 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCC--------------C
Confidence            9999987432      223567789999999999999986532   24689999998765 2111              1


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      ...|+.+|...+.+.+.+.    ..|+++++++||+++||....... ...... ....+..++..++|++..+.+
T Consensus       153 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~  227 (251)
T PRK12826        153 LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAI-AAAIPLGRLGEPEDIAAAVLF  227 (251)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHH-HhcCCCCCCcCHHHHHHHHHH
Confidence            2459999997776666543    458999999999999996432211 111111 112223345566666655543

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-23  Score=172.28  Aligned_cols=160  Identities=22%  Similarity=0.273  Sum_probs=123.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~d~vi~~a   73 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.. .+++++.+|++|.+++.++++        ++|+|||||
T Consensus         6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~A   84 (277)
T PRK05993          6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNG   84 (277)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECC
Confidence            59999999999999999999999999999998765544332 257889999999988766553        479999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.++++..+++|+.++..+++.+.+.+   +.++||++||..++.+.+.              ...|+.
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  150 (277)
T PRK05993         85 AYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY--------------RGAYNA  150 (277)
T ss_pred             CcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc--------------cchHHH
Confidence            86322      223456789999999887777665543   2469999999876543221              245999


Q ss_pred             HHHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ||+..+.+.+    ++.++|+++++++||.+.++..
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        151 SKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence            9996666554    4556799999999999998853

>PRK06196 oxidoreductase; Provisional

Probab=99.91  E-value=1.5e-23  Score=174.43  Aligned_cols=209  Identities=17%  Similarity=0.073  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.... ...++++++|++|.+++.++++       ++|+|||||
T Consensus        28 ~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nA  107 (315)
T PRK06196         28 TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNA  107 (315)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECC
Confidence            68999999999999999999999999999998654332211 1247789999999999877653       589999999


Q ss_pred             cccCC----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           74 ALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        74 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      |....    ..++++..+++|+.++.++++.+.+.+   ..++||++||........  ..++.....+......|+.||
T Consensus       108 g~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~--~~~~~~~~~~~~~~~~Y~~SK  185 (315)
T PRK06196        108 GVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPI--RWDDPHFTRGYDKWLAYGQSK  185 (315)
T ss_pred             CCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCC--CccccCccCCCChHHHHHHHH
Confidence            96322    234577889999999999998887642   235999999975432211  001000001111235699999


Q ss_pred             HHHHHHHHHH----HhcCCCeEEEecCceecCCCCchhHH-HH--HHhhcccceee-eehhhHhhhhhhHHHHH
Q 027007          147 AVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNL-VA--KLQWKKVDLVK-DIFLLERMRHSCKFLTW  212 (229)
Q Consensus       147 ~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~~-~~--~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  212 (229)
                      .+.+.+++.+    .++|+++++++||.+.+|........ ..  ..+.....++. ++..+++.+.++.|+..
T Consensus       186 ~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  259 (315)
T PRK06196        186 TANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAAT  259 (315)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhc
Confidence            9777666554    34689999999999999964322110 00  00000001111 34567777777776664

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.4e-24  Score=171.34  Aligned_cols=161  Identities=24%  Similarity=0.294  Sum_probs=124.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+.    +.....+.++++|++|.+++.++++       .+|+|
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            489999999999999999999999999999997654322    1111257889999999999877654       37999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....       +.+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.              .
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~--------------~  148 (257)
T PRK07024         83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG--------------A  148 (257)
T ss_pred             EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------------C
Confidence            999997421       113466789999999999998776543   2468999999876543321              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.||...+.+.+.+    .++|+++++++||.+.+|.
T Consensus       149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence            45999999776666554    4569999999999999985

>PRK06484 short chain dehydrogenase; Validated

Probab=99.91  E-value=7.5e-24  Score=187.45  Aligned_cols=195  Identities=20%  Similarity=0.195  Sum_probs=142.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+..+++|++|++++.++++       .+|+||||
T Consensus       271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~n  350 (520)
T PRK06484        271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNN  350 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998654433221  1356678999999998877664       48999999


Q ss_pred             CcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||....       +.++|++.+++|+.++.++++++.+++. .++||++||.+++.+.++              ...|+.
T Consensus       351 Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  416 (520)
T PRK06484        351 AGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP--------------RNAYCA  416 (520)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC--------------CchhHH
Confidence            997421       2235778899999999999999988753 359999999877654332              245999


Q ss_pred             HHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +|+..+    .++.++.++|+++++|+||.+.+|......   ......+. ...+.++...+++++.++.|+-
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dia~~~~~l~  489 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIR-RRIPLGRLGDPEEVAEAIAFLA  489 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHh
Confidence            999555    445555667999999999999998642110   11111111 1223456678888888877764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.90  E-value=1.1e-22  Score=171.75  Aligned_cols=171  Identities=29%  Similarity=0.398  Sum_probs=131.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCC------CC------C---CCC-CCeEEEEccCCCh------h
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDI------SG------L---PSE-GALELVYGDVTDY------R   57 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~------~~------~---~~~-~~~~~~~~D~~~~------~   57 (229)
                      +|||||||||||++++++|+++|  ++|+++.|+.+..      ..      +   ... .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  6799999976521      00      0   000 3688999999864      4


Q ss_pred             hHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCc--ccc
Q 027007           58 SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEE  135 (229)
Q Consensus        58 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~--~~~  135 (229)
                      ++.++.+++|+|||+|+..... ..++...++|+.++.++++++.+.. .++++++||..+++........+...  ...
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~  158 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPP  158 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCccccccccccc
Confidence            6667778899999999976532 3456778899999999999998874 56799999999887643222122211  111


Q ss_pred             ccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecC
Q 027007          136 KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~  174 (229)
                      ..+.+.|+.+|..+|.+++...+.|++++++|||.++|+
T Consensus       159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGN  197 (367)
T ss_pred             cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeec
Confidence            223457999999999999988777999999999999997

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=3.9e-23  Score=162.57  Aligned_cols=181  Identities=24%  Similarity=0.304  Sum_probs=139.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CC---CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ++|+||||+||||++|++.|..+|++|++++.--.... .+   -....++.+.-|+..+     ++..+|.|+|+|++.
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAapa  102 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAAPA  102 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhccCC
Confidence            58999999999999999999999999999987433222 11   1224667777777655     677899999999985


Q ss_pred             CC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc--ccccccCcHHHHHHHHHHH
Q 027007           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~~~e~~  152 (229)
                      .+  ..-.+.+.+.+|+.++.+++..|++.+  +|+++.||+.+||.....+-.++.+-  .+..+.++|...|..+|.+
T Consensus       103 sp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L  180 (350)
T KOG1429|consen  103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETL  180 (350)
T ss_pred             CCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHH
Confidence            43  234577889999999999999999975  69999999999998655544444332  2334578899999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC-----CchhHHHHHHhh
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK-----LTTGNLVAKLQW  188 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~-----~~~~~~~~~~~~  188 (229)
                      +..+.+ .|+.+.+.|+.++|||..     ....+|+.+.++
T Consensus       181 ~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr  222 (350)
T KOG1429|consen  181 CYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALR  222 (350)
T ss_pred             HHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhc
Confidence            999975 499999999999999953     234455555554

>PRK09186 flagellin modification protein A; Provisional

Probab=99.90  E-value=3.2e-23  Score=167.28  Aligned_cols=201  Identities=19%  Similarity=0.125  Sum_probs=135.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcCC-------c
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFG-------C   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~-------~   66 (229)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..       .....+.++++|++|++++.++++.       +
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            4799999999999999999999999999999986553221       0112456779999999998777653       7


Q ss_pred             cEEEEeCcccC---------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           67 HVIFHTAALVE---------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        67 d~vi~~a~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      |+|||||+...         .+.+.+.+.+++|+.++..+++++.+.+   ..++||++||.+++........++.... 
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~-  163 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT-  163 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC-
Confidence            99999997421         1123456779999999999998887653   2469999999776543211111111111 


Q ss_pred             cccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          135 EKYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                         ....|+.+|...+.+.+    ++.++|+++++++||.++++..   ..+... .... ....+...++|++.+..|+
T Consensus       164 ---~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---~~~~~~-~~~~-~~~~~~~~~~dva~~~~~l  235 (256)
T PRK09186        164 ---SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---EAFLNA-YKKC-CNGKGMLDPDDICGTLVFL  235 (256)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---HHHHHH-HHhc-CCccCCCCHHHhhhhHhhe
Confidence               12359999996666654    4445689999999999987642   122111 1111 1223456777777655443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.90  E-value=2.9e-23  Score=166.83  Aligned_cols=195  Identities=17%  Similarity=0.177  Sum_probs=138.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.++++++++       ++|+
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999999765432211     11357889999999998877664       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||+++....      +.+++++.+++|+.++.++++++.+.+   +.+++|++||..++.+...              .
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~--------------~  149 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG--------------E  149 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC--------------C
Confidence            9999986321      223456779999999999999887543   2468999999877765432              2


Q ss_pred             CcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch------hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      ..|+.+|.+.+.+.+    ++.+.++++++++||.+++|.....      .......+.... +.+++..++|++.+..|
T Consensus       150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~  228 (250)
T TIGR03206       150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI-PLGRLGQPDDLPGAILF  228 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC-CccCCcCHHHHHHHHHH
Confidence            349999975555544    4445589999999999999853111      111111112222 23456778887777666


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       229 l  229 (250)
T TIGR03206       229 F  229 (250)
T ss_pred             H
Confidence            4

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-23  Score=168.02  Aligned_cols=161  Identities=24%  Similarity=0.260  Sum_probs=124.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcCC----ccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~d~vi~~a~~~   76 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+++.. ...++++++|++|.+++.+++++    +|.+||+||..
T Consensus         3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~   82 (240)
T PRK06101          3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDC   82 (240)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCccc
Confidence            58999999999999999999999999999998655443322 13578899999999999888764    68999999853


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      ..      +.+++++.+++|+.++.++++++.+.+. .+++|++||..+..+.+.              ...|+.+|...
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~asK~a~  148 (240)
T PRK06101         83 EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR--------------AEAYGASKAAV  148 (240)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC--------------CchhhHHHHHH
Confidence            21      2234567899999999999999988642 347999998764432221              23599999966


Q ss_pred             HHHHHH----HHhcCCCeEEEecCceecCCC
Q 027007          150 DKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       150 e~~~~~----~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.+.+.    +.++|+++++++||.+++|..
T Consensus       149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~  179 (240)
T PRK06101        149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLT  179 (240)
T ss_pred             HHHHHHHHHHHHhcCceEEEEeCCcCCCCCc
Confidence            666554    456799999999999999863

>PLN02778 3,5-epimerase/4-reductase

Probab=99.90  E-value=2.2e-22  Score=166.16  Aligned_cols=161  Identities=16%  Similarity=0.219  Sum_probs=114.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      ||||||||+||||++++++|+++|++|+...                   .|++|.+.+...+.  ++|+|||+|+....
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~   70 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVTGR   70 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcccCC
Confidence            7999999999999999999999999987532                   24556666665555  68999999997532


Q ss_pred             -----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC------CcccCCCCccccccccCcHHHHHH
Q 027007           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD------GYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~------~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                           +..++.+.+++|+.++.+++++|.+.+ .+ ++++||..+|+...      +.+.+|+.++.  ++.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~--~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPN--FTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCCC--CCCCchHHHHH
Confidence                 234677899999999999999999885 44 56667766775422      11223322221  22367999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhh
Q 027007          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQW  188 (229)
Q Consensus       148 ~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~  188 (229)
                      ++|.+++.+.+    ...+|++..++++......++...+.
T Consensus       147 ~~E~~~~~y~~----~~~lr~~~~~~~~~~~~~~fi~~~~~  183 (298)
T PLN02778        147 MVEELLKNYEN----VCTLRVRMPISSDLSNPRNFITKITR  183 (298)
T ss_pred             HHHHHHHHhhc----cEEeeecccCCcccccHHHHHHHHHc
Confidence            99999988753    56788888788753222345555443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.90  E-value=1.4e-23  Score=169.51  Aligned_cols=193  Identities=17%  Similarity=0.165  Sum_probs=138.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.+..+.+.     ....+.++.+|++|.+++.++++       ++|+|
T Consensus        13 ~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   92 (255)
T PRK06113         13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDIL   92 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999999999999999998765432211     11357788999999998876543       47999


Q ss_pred             EEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        70 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||+||....     +.+++++.+++|+.++.++++++.+.+   ..+++|++||..+..+...              ...
T Consensus        93 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  158 (255)
T PRK06113         93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------MTS  158 (255)
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC--------------cch
Confidence            999996322     123456679999999999999997643   2359999999875533221              245


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |+.+|...+.+++.    +..+|+++++++||.+.++.....  ..+..+ ... ..+..+++.+++++.++.|+
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~d~a~~~~~l  231 (255)
T PRK06113        159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-MLQ-HTPIRRLGQPQDIANAALFL  231 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHH-HHh-cCCCCCCcCHHHHHHHHHHH
Confidence            99999976666554    445689999999999999864221  122111 112 22345677888888777665

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-23  Score=168.45  Aligned_cols=191  Identities=21%  Similarity=0.178  Sum_probs=136.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|+++..+.+.     ....++++.+|++|.+++.++++       .+|+
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999999764322211     11256788999999998766554       5899


Q ss_pred             EEEeCcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |||+||....         +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.              
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  152 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS--------------  152 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc--------------
Confidence            9999996321         123456678999999999999998753   23599999998776431              


Q ss_pred             cccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         +.|+.+|++.+.+++.++    ..|+++++++||.+.++..... ............. ......+++++.++.+
T Consensus       153 ---~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~  226 (250)
T PRK07774        153 ---NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIP-LSRMGTPEDLVGMCLF  226 (250)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCC-CCCCcCHHHHHHHHHH
Confidence               349999997777766654    3489999999999999875321 1112222222221 2345566776666543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.2e-23  Score=168.34  Aligned_cols=194  Identities=15%  Similarity=0.079  Sum_probs=138.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...    . ..++.++++|++|.+++.++++       .+|+|
T Consensus        12 ~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   91 (265)
T PRK07097         12 IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDIL   91 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5899999999999999999999999999998865433211    1 1257889999999999877664       48999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.+++.+.+++|+.++..+++.+.+.+   ..++||++||.....+.+.              ..
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  157 (265)
T PRK07097         92 VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET--------------VS  157 (265)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC--------------Cc
Confidence            999997432      224567789999999999999887643   2469999999754332211              24


Q ss_pred             cHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhH--------HHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          141 QYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGN--------LVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      .|+.+|...+.+++    ++.++|+++++|+||.+.+|.......        -....+.. ..+..+...+++++..+.
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~  236 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA-KTPAARWGDPEDLAGPAV  236 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh-cCCccCCcCHHHHHHHHH
Confidence            59999996555554    455669999999999999986422110        01111111 222456778888887776


Q ss_pred             HH
Q 027007          209 FL  210 (229)
Q Consensus       209 ~l  210 (229)
                      |+
T Consensus       237 ~l  238 (265)
T PRK07097        237 FL  238 (265)
T ss_pred             HH
Confidence            65

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-23  Score=168.10  Aligned_cols=194  Identities=15%  Similarity=0.127  Sum_probs=137.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|++++.++++       .+|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            47899999999999999999999999999999865433221     11367889999999998877653       5799


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||...      .+.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+...              
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  147 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG--------------  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC--------------
Confidence            999998521      1234577889999999999999997642    1358999999876543222              


Q ss_pred             cCcHHHHHHHHHHH----HHHHHh-cCCCeEEEecCceecCCCC----chhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          139 CTQYERSKAVADKI----ALQAAS-EGLPIVPVYPGVIYGPGKL----TTGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~----~~~~~~-~gi~~~~irpg~i~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      ...|+.+|...+.+    +.++.+ +|+++++|+||.+.++...    ....... .+... .+..+...+++++.+..|
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~va~~~~~  225 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAK-RTIQS-VPLGRLGTPEEIAGLAYF  225 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHH-HHhcc-CCCCCCCCHHHHHHHHHH
Confidence            23499999855544    455543 5999999999999864311    1111111 11122 234567788888877666


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       226 l  226 (252)
T PRK07677        226 L  226 (252)
T ss_pred             H
Confidence            5

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.9e-23  Score=166.48  Aligned_cols=160  Identities=19%  Similarity=0.151  Sum_probs=124.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC---CC-CCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.   +. ....++++.+|+++.+++.++++       .+|+||
T Consensus         9 ~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   88 (258)
T PRK08628          9 VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLV   88 (258)
T ss_pred             EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999998754311   10 12357889999999999877664       589999


Q ss_pred             EeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           71 HTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        71 ~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      |+||....     ..+++++.+++|+.++.++.+.+.+.+.  .++||++||..++.+...              ...|+
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~Y~  154 (258)
T PRK08628         89 NNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG--------------TSGYA  154 (258)
T ss_pred             ECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC--------------CchhH
Confidence            99996321     1145677899999999999999876532  358999999876543221              24599


Q ss_pred             HHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       144 ~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      .+|+..+.+++.++    ++|++++.|+||.+++|.
T Consensus       155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            99997777766654    568999999999999986

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-23  Score=166.32  Aligned_cols=161  Identities=25%  Similarity=0.236  Sum_probs=124.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------~~d~v   69 (229)
                      |++|||||+|+||++++++|+++|++|++++|+..+........++.++++|++|.+++.+++.           .+|++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            6899999999999999999999999999999976431111112357889999999998877432           47899


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||+....       +.+++++.+++|+.++..+.+.+.+.+.   .++||++||..++.+..+              .
T Consensus        82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  147 (243)
T PRK07023         82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG--------------W  147 (243)
T ss_pred             EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC--------------c
Confidence            999987432       1234677899999999999888876542   359999999876654322              2


Q ss_pred             CcHHHHHHHHHHHHHHHHh---cCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~---~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.+|...+.+++.++.   .|+++++|+||.+-+|.
T Consensus       148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence            4599999998888887653   48999999999998774

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-23  Score=168.37  Aligned_cols=194  Identities=22%  Similarity=0.201  Sum_probs=134.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++..++. ++.+.    +. ....+.++++|++|.+++.++++       ++|+
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            489999999999999999999999988876542 22111    11 11357789999999998877765       5899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |||||+....       +.+++++.+++|+.++.++++++.+.+.      .+++|++||..++.+.+..          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  153 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----------  153 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC----------
Confidence            9999997422       2234567899999999999999877531      2379999997654332210          


Q ss_pred             ccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.+|+..+.+++.+    .++|+++++++||.++||.....  ..+.. .... ..++.+.+.+++++.++.|
T Consensus       154 ---~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~-~~~~-~~p~~~~~~~~d~a~~~~~  228 (248)
T PRK06123        154 ---YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVD-RVKA-GIPMGRGGTAEEVARAILW  228 (248)
T ss_pred             ---ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHH-HHHh-cCCCCCCcCHHHHHHHHHH
Confidence               123999999877766555    44589999999999999964221  11111 1111 1234455667777776665


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       229 l  229 (248)
T PRK06123        229 L  229 (248)
T ss_pred             H
Confidence            3

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-23  Score=170.85  Aligned_cols=191  Identities=19%  Similarity=0.173  Sum_probs=134.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC---------CCCCC----CCC-CCCeEEEEccCCChhhHHhhcC---
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISG----LPS-EGALELVYGDVTDYRSLVDACF---   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~---   64 (229)
                      ++|||||+++||++++++|+++|++|++++|+.         ++.+.    +.. ...+..+.+|++|.+++.++++   
T Consensus         8 ~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (286)
T PRK07791          8 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAV   87 (286)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999998764         21111    111 1356788999999998866553   


Q ss_pred             ----CccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccceeeecCCCc
Q 027007           65 ----GCHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        65 ----~~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~  125 (229)
                          ++|++|||||...      .+.++|++.+++|+.+++++++++.+.+.         .++||++||..+..+.++ 
T Consensus        88 ~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-  166 (286)
T PRK07791         88 ETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG-  166 (286)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC-
Confidence                5899999999742      12346788899999999999998875431         248999999876544322 


Q ss_pred             ccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhccccee-eeehhh
Q 027007          126 IADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLV-KDIFLL  200 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~  200 (229)
                                   ...|+.+|+    +++.++.++.++|+++++|+|| +.++...   ........ ..... .+...|
T Consensus       167 -------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~---~~~~~~~~-~~~~~~~~~~~p  228 (286)
T PRK07791        167 -------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE---TVFAEMMA-KPEEGEFDAMAP  228 (286)
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch---hhHHHHHh-cCcccccCCCCH
Confidence                         245999998    4556666677789999999999 6555421   11111111 11100 134678


Q ss_pred             HhhhhhhHHHH
Q 027007          201 ERMRHSCKFLT  211 (229)
Q Consensus       201 ~~~~~~~~~l~  211 (229)
                      ++++.++.|+-
T Consensus       229 edva~~~~~L~  239 (286)
T PRK07791        229 ENVSPLVVWLG  239 (286)
T ss_pred             HHHHHHHHHHh
Confidence            88888877764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-23  Score=169.69  Aligned_cols=205  Identities=15%  Similarity=0.114  Sum_probs=140.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~------~~d~vi   70 (229)
                      .++|||+ |+||++++++|+ +|++|++++|+.++.+.+    .. ...+.++++|++|.+++.++++      ++|+||
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li   81 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV   81 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence            4789987 799999999996 899999999976543321    11 1257789999999998877654      589999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCC-----Ccc---cCCCCc--cc---cc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTD-----GYI---ADENQV--HE---EK  136 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~-----~~~---~~~~~~--~~---~~  136 (229)
                      ||||... ...++++.+++|+.++.++++++.+.+. .+++|++||..+.....     ...   .+....  .+   +.
T Consensus        82 ~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         82 HTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             ECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            9999753 3357889999999999999999987642 24788888876543210     000   000000  00   00


Q ss_pred             ---cccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCch-----hHHHHHHhhcccceeeeehhhHhhh
Q 027007          137 ---YFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTT-----GNLVAKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       137 ---~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  204 (229)
                         +....|+.||+..    +.+++++.++||++++|+||.+.++.....     ....... . ...+.++.+.++|++
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~-~-~~~p~~r~~~peeia  238 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNM-F-AKSPAGRPGTPDEIA  238 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHH-h-hhCCcccCCCHHHHH
Confidence               1235699999954    455556667799999999999999863210     1111111 1 123456788999999


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.||-
T Consensus       239 ~~~~fL~  245 (275)
T PRK06940        239 ALAEFLM  245 (275)
T ss_pred             HHHHHHc
Confidence            9988864

>PRK12743 oxidoreductase; Provisional

Probab=99.90  E-value=3.5e-23  Score=167.32  Aligned_cols=194  Identities=16%  Similarity=0.120  Sum_probs=137.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++.++.. ..+.    +. ....++++++|++|++++.++++       .+|+
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999998876432 2111    11 11367889999999998766654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||+||....      +.+++++.+++|+.++.++++++.+.+    ..++||++||.....+..+              
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~--------------  149 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG--------------  149 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC--------------
Confidence            9999987322      224567789999999999999987653    1258999999754332221              


Q ss_pred             cCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+++    ++.++|++++.|+||.+++|.............. ...+..+...+++++.++.|+
T Consensus       150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l  224 (256)
T PRK12743        150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSR-PGIPLGRPGDTHEIASLVAWL  224 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHH-hcCCCCCCCCHHHHHHHHHHH
Confidence            2459999996665554    4556799999999999999864322111111111 122345667888888887765

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.8e-23  Score=170.62  Aligned_cols=161  Identities=23%  Similarity=0.278  Sum_probs=125.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++++.    +.....+..+++|++|.+++.++++       ++|+||
T Consensus        11 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI   90 (296)
T PRK05872         11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVV   90 (296)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999998654332    1112245667799999998876653       589999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||||....      +.+++++.+++|+.++.++++.+.+.+  ..++||++||..++.+.+..              ..|
T Consensus        91 ~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y  156 (296)
T PRK05872         91 ANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM--------------AAY  156 (296)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc--------------hHH
Confidence            99997321      224567889999999999999998753  23589999998877554322              349


Q ss_pred             HHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCC
Q 027007          143 ERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       143 ~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.+|+..+.+.    .++..+|+++++++||++.++..
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  194 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLV  194 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhh
Confidence            99999655554    45566799999999999998864

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-23  Score=168.88  Aligned_cols=192  Identities=22%  Similarity=0.198  Sum_probs=137.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~~   78 (229)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+.+.......++.+|+++.+++.++++   .+|+|||+|+....
T Consensus        11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~   90 (245)
T PRK07060         11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASL   90 (245)
T ss_pred             EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            799999999999999999999999999999986544333222245678899999998887765   48999999987321


Q ss_pred             ------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           79 ------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                            ..+++++.+++|+.++.++++++.+..    ..++||++||...+.+...              ...|+.+|..
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~y~~sK~a  156 (245)
T PRK07060         91 ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------HLAYCASKAA  156 (245)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------CcHhHHHHHH
Confidence                  223566778899999999999987642    1258999999877654322              2349999998


Q ss_pred             HHHHHHHHH----hcCCCeEEEecCceecCCCCc---hhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          149 ADKIALQAA----SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       149 ~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      .+.+++.++    +.|+++++++||.++++....   ......... . ..+.+++..++|++.+..+
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~d~a~~~~~  222 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPML-A-AIPLGRFAEVDDVAAPILF  222 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHH-h-cCCCCCCCCHHHHHHHHHH
Confidence            877666554    458999999999999986421   111111111 1 1223456667777666544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-23  Score=171.06  Aligned_cols=194  Identities=21%  Similarity=0.198  Sum_probs=138.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+..    .   ....+.++++|++|++++.++++       ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3799999999999999999999999999999976432211    1   11357788999999998877665       58


Q ss_pred             cEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |+|||+||....       +.+++.+.+++|+.++.++++++.+.+   ..++||++||..++.+.+.            
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------  155 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW------------  155 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC------------
Confidence            999999985321       223466789999999999999887653   2358999999876543221            


Q ss_pred             cccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                        .+.|+.+|.+.+.+++.++    ..++++++++||.+.++.....   .......  ....+..+.+.++|++.++.|
T Consensus       156 --~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~  231 (276)
T PRK05875        156 --FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADY--RACTPLPRVGEVEDVANLAMF  231 (276)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHH--HcCCCCCCCcCHHHHHHHHHH
Confidence              2459999998887776654    4589999999999998864221   1111111  112223456667777666555


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       232 l  232 (276)
T PRK05875        232 L  232 (276)
T ss_pred             H
Confidence            4

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.6e-23  Score=167.09  Aligned_cols=195  Identities=19%  Similarity=0.177  Sum_probs=140.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..    . ....+.++++|++|.+++.++++       ++|+
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999876533221    1 11357889999999999877663       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||++|....      +.+++++.+++|+.++.++++++.+.+.   .+++|++||...+.+...              .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK--------------L  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC--------------c
Confidence            9999997422      2234667789999999999999876531   349999999766544322              1


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|...+.+++.+    ...+++++.++||.+.++......  .+.....  ...+..+...+++++.++.++-
T Consensus       154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL--KGRALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH--hcCCCCCCCCHHHHHHHHHHHh
Confidence            34999999777766654    356899999999999988643221  2222211  1223455677777777766654

>PRK09242 tropinone reductase; Provisional

Probab=99.90  E-value=3e-23  Score=167.71  Aligned_cols=194  Identities=18%  Similarity=0.158  Sum_probs=140.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.       ....+.++++|+++.+++.+++.       ++|
T Consensus        11 ~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   90 (257)
T PRK09242         11 TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLH   90 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999865432211       12357788999999988765543       589


Q ss_pred             EEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+||...      .+.+++++.+++|+.++.++++++.+.+   ..+++|++||..++.+...              
T Consensus        91 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------  156 (257)
T PRK09242         91 ILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS--------------  156 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC--------------
Confidence            9999998631      1334677889999999999999987643   2368999999877654332              


Q ss_pred             cCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|...+.+++    ++.++|++++.++||.+.+|.....   ........  ...+..+...+++++.++.|+-
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~  234 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVI--ERTPMRRVGEPEEVAAAVAFLC  234 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHH--hcCCCCCCcCHHHHHHHHHHHh
Confidence            2459999996665554    4556799999999999999864321   11222111  1223456677888888776653

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.7e-23  Score=166.42  Aligned_cols=161  Identities=22%  Similarity=0.203  Sum_probs=123.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++||||+|+||++++++|+++|++|++++|+.+..+.    +.....+.++++|++|++++.++++       ++|+||
T Consensus         7 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi   86 (252)
T PRK06138          7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLV   86 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            69999999999999999999999999999998653322    1112357889999999999877654       689999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |+++....      +.+++++.+++|+.++.++.+.+.+.+   ..++|+++||..+..+...              ...
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~~~  152 (252)
T PRK06138         87 NNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG--------------RAA  152 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC--------------ccH
Confidence            99997422      223456679999999999988876532   2468999999865543221              245


Q ss_pred             HHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      |+.+|.+.+.+++.+    ...|+++++++||+++++..
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF  191 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence            999999766666554    45589999999999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.6e-23  Score=164.37  Aligned_cols=201  Identities=18%  Similarity=0.126  Sum_probs=136.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+||||++++++|+++|++|++++|+.+. .+.    +.. ...+.++++|++|++++.++++       ++|+
T Consensus         8 ~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806          8 TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            68999999999999999999999999999987532 111    111 1256789999999999876654       5899


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      |||+|+.......++...+++|+.++.++++++.+.+. .+++|++||..+......    +..     +....|+.+|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~-----~~~~~Y~~sK~  158 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV----KTM-----PEYEPVARSKR  158 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc----cCC-----ccccHHHHHHH
Confidence            99999864333345677899999999999999998753 358999999643211000    000     01246999999


Q ss_pred             HHHHHHHHH----HhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          148 VADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       148 ~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|.+++.+    ..+|+++++++|+.+.+|....... ...........+..++..++|++.++.++-
T Consensus       159 a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (248)
T PRK07806        159 AGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAV  227 (248)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHh
Confidence            888777665    4568999999999888774211000 000011111122346777888877766554

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=4.5e-23  Score=165.47  Aligned_cols=161  Identities=20%  Similarity=0.213  Sum_probs=120.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CCC--CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+..+ .+.    +..  ...+.++.+|++|.+++.++++       ++|
T Consensus         8 ~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135          8 VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999986422 111    111  1257889999999998877765       479


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||+||....      ..+++++.+++|+.++.++++++.+...  .+++++++|.....+.              .+.
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~  153 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPL--------------KGY  153 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCC--------------CCc
Confidence            99999986321      1234677899999999999999976532  2366666653321110              113


Q ss_pred             CcHHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~  176 (229)
                      +.|+.+|...+.+++.++..   ++++++++||.++||..
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~  193 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED  193 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence            56999999999888887632   69999999999999975

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-23  Score=171.19  Aligned_cols=161  Identities=18%  Similarity=0.180  Sum_probs=127.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    .. ...+.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   87 (275)
T PRK05876          8 GAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVV   87 (275)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986543321    11 1257788999999999877654       47999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+.+    ..++||++||..++.+.+.              .
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (275)
T PRK05876         88 FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG--------------L  153 (275)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC--------------C
Confidence            999996321      223567789999999999999987643    1358999999887754322              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|.    +++.++.++.++|+++++++||.+.++..
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  194 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV  194 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence            45999998    57778888877899999999999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=5.3e-23  Score=164.79  Aligned_cols=195  Identities=18%  Similarity=0.204  Sum_probs=136.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhc-------CCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDAC-------FGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~~   72 (229)
                      +++||||+|+||++++++|+++|+.|++.+|+.++.+.+..  ...++++.+|+++.+++.+++       .++|+||||
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (245)
T PRK12936          8 KALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNN   87 (245)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999988887654332211  125778899999999887764       358999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...|+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  153 (245)
T PRK12936         88 AGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG--------------QANYC  153 (245)
T ss_pred             CCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC--------------CcchH
Confidence            997421      224567789999999999999886531   3468999999765543322              13499


Q ss_pred             HHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+|...    +.++.++...|+++++++||.+.++............. ....+..+...+++++.++.|+-
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ia~~~~~l~  224 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAI-MGAIPMKRMGTGAEVASAVAYLA  224 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHH-hcCCCCCCCcCHHHHHHHHHHHc
Confidence            999844    45555555678999999999998875422111111111 11223345667777777776653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-23  Score=166.83  Aligned_cols=195  Identities=19%  Similarity=0.159  Sum_probs=139.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    . ....++++++|++|.+++.++++       ++|+|
T Consensus         9 ~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   88 (253)
T PRK06172          9 VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYA   88 (253)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999986543221    1 11357889999999998877654       46999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||+||....       +.+++++.+++|+.++..+++++.+..   ..+++|++||..++.+...              .
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~  154 (253)
T PRK06172         89 FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK--------------M  154 (253)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------------C
Confidence            999986321       224567789999999999988776542   2358999999877765432              2


Q ss_pred             CcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|+..+.+++    ++.++|+++++++||.+.++.....   .......... ..+..+...|++++....|+-
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~ia~~~~~l~  232 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA-MHPVGRIGKVEEVASAVLYLC  232 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc-cCCCCCccCHHHHHHHHHHHh
Confidence            459999996655554    4445689999999999988864321   1111111112 223356677888887766664

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=3e-23  Score=167.46  Aligned_cols=161  Identities=21%  Similarity=0.208  Sum_probs=124.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+...     ...+++.+.+|++|.+++.++++       .+|+|
T Consensus         6 ~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   85 (258)
T PRK12429          6 VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDIL   85 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999865433211     12367889999999999877665       58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+|+....      +.++++..+++|+.++.++++.+.+.+   ..++||++||..++.+..+              .+
T Consensus        86 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------~~  151 (258)
T PRK12429         86 VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG--------------KA  151 (258)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--------------cc
Confidence            999986322      223455678899999999988887643   3569999999876644322              24


Q ss_pred             cHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      .|+.+|.+.+.+++.+    ...++++++++||.+++|..
T Consensus       152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~  191 (258)
T PRK12429        152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV  191 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence            5999999777666554    34689999999999999863

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-23  Score=167.03  Aligned_cols=161  Identities=19%  Similarity=0.179  Sum_probs=122.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCC----CCC-CCCeEEEEccCCChhhHHhhcC-----------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-----------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-----------   64 (229)
                      +++||||+|+||++++++|+++|++|++. .|+.++.+.    +.. ...++++++|++|++++.++++           
T Consensus         8 ~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~   87 (254)
T PRK12746          8 VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVG   87 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccC
Confidence            79999999999999999999999999775 565432211    111 1357889999999999877655           


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                        ++|+|||+||....      +.+.++..+++|+.++.++++++.+.+. .+++|++||..++.+.++           
T Consensus        88 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~-----------  156 (254)
T PRK12746         88 TSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG-----------  156 (254)
T ss_pred             CCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC-----------
Confidence              48999999987432      1123466788999999999999987632 358999999877654322           


Q ss_pred             ccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                         ...|+.+|.+.+.+.+.+    .++++++++++||.+++|..
T Consensus       157 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  198 (254)
T PRK12746        157 ---SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN  198 (254)
T ss_pred             ---CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence               245999999777665544    45689999999999999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.2e-23  Score=166.98  Aligned_cols=195  Identities=17%  Similarity=0.144  Sum_probs=139.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ...+++++.+|+++.+++.++++       ++|+
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999865433211     11357889999999998876654       5899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||+||...      .+.+++++.+++|+.++.++++++.+.+    ..+++|++||..+..+..+              
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  156 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG--------------  156 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC--------------
Confidence            999998632      1224577889999999999999997642    2468999999765433221              


Q ss_pred             cCcHHHHHHHHHHHHHHHHh---cCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~---~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|.+.+.+++.++.   .+++++.++||.+.++.....  .......+.... +..+...+++++.+..|+
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~va~~~~~l  232 (263)
T PRK07814        157 FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKAT-PLRRLGDPEDIAAAAVYL  232 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            24599999988777776653   269999999999988753210  111112222222 234566788888777664

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-23  Score=169.14  Aligned_cols=161  Identities=22%  Similarity=0.153  Sum_probs=124.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       .+|+||||
T Consensus         5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~   84 (275)
T PRK08263          5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNN   84 (275)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654332211  1357788999999998866654       57999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++.+.+.+   ..+++|++||..++.+.+.              ...|+
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~~~Y~  150 (275)
T PRK08263         85 AGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM--------------SGIYH  150 (275)
T ss_pred             CCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC--------------ccHHH
Confidence            997422      234677889999999999999885432   2469999999877755432              24599


Q ss_pred             HHHHHHHHHHHH----HHhcCCCeEEEecCceecCCC
Q 027007          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       144 ~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+|+..+.+.+.    +.++|+++++++||.+.++..
T Consensus       151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence            999976655544    445699999999999988754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=4.5e-23  Score=166.86  Aligned_cols=198  Identities=19%  Similarity=0.171  Sum_probs=138.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+...     ....+.++++|++|++++.++++       .+|+
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999999765432211     11357789999999999866553       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||+||....      +.+++++.+++|+.++.++++++.+.    ...+++|++||...+.+.+...          ..
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~----------~~  162 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV----------MD  162 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc----------cC
Confidence            9999986321      22345677899999999999988765    1345899999986654332110          01


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|+..+.+++.++    ++|+++++++||.+.++..... ..+...+. . ..+..+++.+++++....|+
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~va~~~~~l  237 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLL-A-HTPLGRLGDDEDLKGAALLL  237 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHH-h-cCCCCCCcCHHHHHHHHHHH
Confidence            2459999997777766654    4589999999999988753221 22222221 1 22334566788887665544

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.9e-23  Score=166.91  Aligned_cols=160  Identities=21%  Similarity=0.144  Sum_probs=123.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.++..     ....++++++|++|.+++.++++       ++|+|
T Consensus        12 ~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   91 (274)
T PRK07775         12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVL   91 (274)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999998754332211     11357788999999999877664       57999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+||....      +.+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+.+.              ..
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  157 (274)
T PRK07775         92 VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH--------------MG  157 (274)
T ss_pred             EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------------cc
Confidence            999987422      123455678999999999999987542   2358999999877654321              24


Q ss_pred             cHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      .|+.+|...+.+++.++    +.|++++++|||.+.++.
T Consensus       158 ~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~  196 (274)
T PRK07775        158 AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGM  196 (274)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcc
Confidence            59999998888887765    348999999999987764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=5.1e-23  Score=166.76  Aligned_cols=195  Identities=14%  Similarity=0.112  Sum_probs=136.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----CC--CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+++||++++++|+++|++|+++.|+. ++.+.    +.  ....+.++++|++|++++.++++       ++|
T Consensus        10 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         10 TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            689999999999999999999999999887643 22211    11  12367899999999998876654       479


Q ss_pred             EEEEeCcccC--------C----CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCc
Q 027007           68 VIFHTAALVE--------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        68 ~vi~~a~~~~--------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                      +||||||...        +    ..+++...+++|+.++..+.+.+.+.+.   .++||++||..+..+.+..       
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  162 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY-------  162 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc-------
Confidence            9999997531        1    1134566799999999999888877642   3589999997654332221       


Q ss_pred             cccccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhh
Q 027007          133 HEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                             ..|+.+|+..+.+    +.++.++|+++++|+||.+.++......  ...... .....+.++...|++++.+
T Consensus       163 -------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~-~~~~~~~~r~~~p~~va~~  234 (260)
T PRK08416        163 -------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAK-TEELSPLNRMGQPEDLAGA  234 (260)
T ss_pred             -------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHH-HHhcCCCCCCCCHHHHHHH
Confidence                   3499999955554    4555567999999999999888532111  111111 1122235667889999888


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.|+-
T Consensus       235 ~~~l~  239 (260)
T PRK08416        235 CLFLC  239 (260)
T ss_pred             HHHHc
Confidence            87763

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=3.6e-23  Score=166.13  Aligned_cols=159  Identities=23%  Similarity=0.208  Sum_probs=125.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC--------CCCCCeEEEEccCCChhhHHhhc-------CCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVTDYRSLVDAC-------FGC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~-------~~~   66 (229)
                      .|+|||||++||.++|.+|+++|.+++++.|..++++.+        +.+ .+..+++|++|.+++.+++       .++
T Consensus        14 vVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   14 VVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999998888887665443        222 5899999999999998654       469


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |++|||||....      ..++....+++|+.|+-.+.+++.++++   .++||.+||.+++.+.+..            
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~------------  160 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR------------  160 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc------------
Confidence            999999998422      2235566899999999999999988763   2699999999988765432            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeE-EEecCceecCC
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIV-PVYPGVIYGPG  175 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~-~irpg~i~g~~  175 (229)
                        +.|++||.    +.|.+.+|+...+..+. .+.||.|-+..
T Consensus       161 --~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~  201 (282)
T KOG1205|consen  161 --SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEF  201 (282)
T ss_pred             --cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecc
Confidence              34999998    66677777776653222 79999998874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.90  E-value=7.2e-23  Score=165.96  Aligned_cols=198  Identities=19%  Similarity=0.178  Sum_probs=146.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhc--------CC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDAC--------FG   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~--------~~   65 (229)
                      .++||||+.+||++++++|++.|++|++.+|+.++.+...        ....+..+.+|+++.+++++++        .+
T Consensus        10 valVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gk   89 (270)
T KOG0725|consen   10 VALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGK   89 (270)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999876533211        1235788999999987765543        45


Q ss_pred             ccEEEEeCcccC-------CCCCCchhhhHhhHH-HHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           66 CHVIFHTAALVE-------PWLPDPSRFFAVNVE-GLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        66 ~d~vi~~a~~~~-------~~~~~~~~~~~~n~~-~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      +|++|||||...       .+.+.|+..+++|+. +++.+.+++.++.   +...|+++||..++.......        
T Consensus        90 idiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~--------  161 (270)
T KOG0725|consen   90 IDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG--------  161 (270)
T ss_pred             CCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc--------
Confidence            899999999732       234578899999999 4777777776553   234889988887665533221        


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-h----HHHHH-HhhcccceeeeehhhHhhh
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-G----NLVAK-LQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~----~~~~~-~~~~~~~~~~~~~~~~~~~  204 (229)
                           ..|+.+|.    ++..++.++.++|+|+|+|.||.+.++..... .    ....+ .......+.++.+.++|++
T Consensus       162 -----~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva  236 (270)
T KOG0725|consen  162 -----VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVA  236 (270)
T ss_pred             -----ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHH
Confidence                 23999998    66677778889999999999999999862110 0    11111 1233445688999999999


Q ss_pred             hhhHHHHH
Q 027007          205 HSCKFLTW  212 (229)
Q Consensus       205 ~~~~~l~~  212 (229)
                      .+..|+..
T Consensus       237 ~~~~fla~  244 (270)
T KOG0725|consen  237 EAAAFLAS  244 (270)
T ss_pred             HhHHhhcC
Confidence            99988876

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.7e-23  Score=168.07  Aligned_cols=160  Identities=23%  Similarity=0.186  Sum_probs=121.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHh---h---cCCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVD---A---CFGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~---~---~~~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+++..+.+       .....++++.+|++|++++.+   +   +.++|+
T Consensus         5 ~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   84 (280)
T PRK06914          5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRIDL   84 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCeeE
Confidence            489999999999999999999999999999986543221       112368889999999988765   1   235799


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++.+.+.+   ..+++|++||..+..+.+.              .
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  150 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG--------------L  150 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC--------------C
Confidence            9999987432      123456778999999999999976543   2468999999755433221              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.+|...+.+++.+    .++|+++++++||.+++|.
T Consensus       151 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        151 SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            45999999777666654    4669999999999999985

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.4e-22  Score=161.21  Aligned_cols=162  Identities=23%  Similarity=0.280  Sum_probs=123.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC--------CC-CCCCeEEEEccCCChhhHHhhcC-------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------LP-SEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--------~~-~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      |+++||||+|+||++++++|+++|++|++++|...+..+        .. ....++++.+|++|++++.++++       
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999998774322111        00 01357889999999998877663       


Q ss_pred             CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHH-hc---CCCceEEEEccceeeecCCCcccCCCCccc
Q 027007           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK-ET---KTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        65 ~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-~~---~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      ++|+|||+||....      +.+++++.+++|+.++.++++++. +.   ...+++|++||..++.+...          
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  156 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG----------  156 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC----------
Confidence            58999999997431      223566789999999999999998 32   12468999999877654322          


Q ss_pred             cccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                          ...|+.+|...+.+++.+    .+.|+++++++||.+++|..
T Consensus       157 ----~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  198 (249)
T PRK12827        157 ----QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA  198 (249)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence                234999999766665554    34589999999999999975

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=159.21  Aligned_cols=188  Identities=23%  Similarity=0.244  Sum_probs=133.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC------CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~   74 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++  ..    ..+++.+|++|.+++.++++      ++|+|||+|+
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag   77 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--DF----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG   77 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--cc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence            379999999999999999999999999999998654  11    22578999999998877665      5799999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.+++++.+++|+.++.++.+++.+.+   ..+++|++||...++...               ...|+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------~~~Y~~s  142 (234)
T PRK07577         78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD---------------RTSYSAA  142 (234)
T ss_pred             CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC---------------chHHHHH
Confidence            7432      223566789999999999998887643   246999999987553211               2459999


Q ss_pred             HHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |...+.+++    ++.++|+++++++||.+.++.....   ............ ...+...+++++..+.++
T Consensus       143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~l  213 (234)
T PRK07577        143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI-PMRRLGTPEEVAAAIAFL  213 (234)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC-CCCCCcCHHHHHHHHHHH
Confidence            996665554    4556699999999999998863211   111111111111 233455677777665554

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=1.2e-22  Score=179.83  Aligned_cols=171  Identities=19%  Similarity=0.251  Sum_probs=130.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCCCCCC-------CCC------------C-------CCCeEEEEc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDIS-------GLP------------S-------EGALELVYG   51 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~-------~~~------------~-------~~~~~~~~~   51 (229)
                      ++|||||||||||++++++|++.+.   +|+++.|..+...       ++.            .       ..++.++.+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            5799999999999999999998753   6899999653210       110            0       136888999


Q ss_pred             cCCCh------hhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc
Q 027007           52 DVTDY------RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        52 D~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~  125 (229)
                      |++++      ++...+.+++|+|||+|+..... .+++..+++|+.++.+++++|.+....+++||+||.++|+...+.
T Consensus       200 Dl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~  278 (605)
T PLN02503        200 NVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR  278 (605)
T ss_pred             eCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence            99997      45666677899999999986533 567788999999999999999887556799999999999876432


Q ss_pred             ccCCCCc-----------------------------------c--------------------ccccccCcHHHHHHHHH
Q 027007          126 IADENQV-----------------------------------H--------------------EEKYFCTQYERSKAVAD  150 (229)
Q Consensus       126 ~~~~~~~-----------------------------------~--------------------~~~~~~~~Y~~sK~~~e  150 (229)
                      ..|...+                                   .                    -...+++.|..||+++|
T Consensus       279 i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE  358 (605)
T PLN02503        279 IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGE  358 (605)
T ss_pred             eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHH
Confidence            2221111                                   0                    01234688999999999


Q ss_pred             HHHHHHHhcCCCeEEEecCceec
Q 027007          151 KIALQAASEGLPIVPVYPGVIYG  173 (229)
Q Consensus       151 ~~~~~~~~~gi~~~~irpg~i~g  173 (229)
                      .++++.. .+++++++||+.|.+
T Consensus       359 ~lV~~~~-~~LPv~IvRPsiV~s  380 (605)
T PLN02503        359 MVINSMR-GDIPVVIIRPSVIES  380 (605)
T ss_pred             HHHHHhc-CCCCEEEEcCCEecc
Confidence            9999765 479999999999944

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.9e-23  Score=165.93  Aligned_cols=195  Identities=17%  Similarity=0.142  Sum_probs=138.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.+     ...++++++|+++.+++.++++       ++|+|
T Consensus        10 ~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   89 (252)
T PRK07035         10 IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDIL   89 (252)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999997654322111     1246788999999998876654       48999


Q ss_pred             EEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||+|+...       ...+++++.+++|+.++..+++++.+.+   ..+++|++||..++.+.+.              .
T Consensus        90 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  155 (252)
T PRK07035         90 VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF--------------Q  155 (252)
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC--------------C
Confidence            99998532       1223466789999999999999886653   2368999999765543221              2


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||++.+.+++.    +.++|+++++|+||.+.++.....  .....+..... .+..+...++|++....|+-
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~  232 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAH-IPLRRHAEPSEMAGAVLYLA  232 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHcc-CCCCCcCCHHHHHHHHHHHh
Confidence            4599999977666555    446699999999999988753211  11111112222 23456777888887776643

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.6e-23  Score=168.20  Aligned_cols=160  Identities=24%  Similarity=0.260  Sum_probs=123.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.. .+++++.+|++|.+++.++++       ++|+||||||
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999999999999998654433222 246788999999998876653       5899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ....      +.+++++.+++|+.++.++++++.+.+  ..+++|++||..++.+.+.              ...|+.+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  147 (274)
T PRK05693         82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF--------------AGAYCASK  147 (274)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC--------------ccHHHHHH
Confidence            6321      224567789999999999999987653  2358999999776543221              24599999


Q ss_pred             HHHHHHH----HHHHhcCCCeEEEecCceecCCC
Q 027007          147 AVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       147 ~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ...+.+.    .++.++|+++++++||.+.++..
T Consensus       148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  181 (274)
T PRK05693        148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQFA  181 (274)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccccccc
Confidence            9655554    45556799999999999988753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=9.3e-23  Score=164.95  Aligned_cols=194  Identities=15%  Similarity=0.105  Sum_probs=135.7

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCC--CCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT--SDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||  +++||.+++++|+++|++|++++|+.  +..+.+..  ...+.++++|++|++++.++++       ++|+
T Consensus         9 ~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~   88 (256)
T PRK07889          9 RILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDG   88 (256)
T ss_pred             EEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5899999  89999999999999999999998764  21121111  1246789999999998876653       5899


Q ss_pred             EEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||||....          +.+++++.+++|+.+++++++.+.+.+.. ++||++|+....+ .+.             
T Consensus        89 li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-~~~-------------  154 (256)
T PRK07889         89 VVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-WPA-------------  154 (256)
T ss_pred             EEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-CCc-------------
Confidence            9999997421          12345567999999999999999887632 4899887542111 111             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceee-eehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVK-DIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  210 (229)
                       ...|+.||+    +++.+++++.++|+++++|+||.+.+|......  ....+ .+....+.+ +...|++++.++.|+
T Consensus       155 -~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~p~~~~~~~p~evA~~v~~l  232 (256)
T PRK07889        155 -YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEE-GWDERAPLGWDVKDPTPVARAVVAL  232 (256)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHH-HHHhcCccccccCCHHHHHHHHHHH
Confidence             134899998    566677777788999999999999998632111  11111 122222334 577899998887775


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       233 ~  233 (256)
T PRK07889        233 L  233 (256)
T ss_pred             h
Confidence            3

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-23  Score=173.38  Aligned_cols=161  Identities=17%  Similarity=0.200  Sum_probs=126.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhc-------CCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~-------~~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++++++..     ...+.++.+|++|.+++.+++       .++|++
T Consensus         9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   88 (330)
T PRK06139          9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVW   88 (330)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999998765432211     135678899999999987765       358999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ..
T Consensus        89 VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~--------------~~  154 (330)
T PRK06139         89 VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY--------------AA  154 (330)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC--------------ch
Confidence            999996321      223466789999999999999887653   2358999999877654332              24


Q ss_pred             cHHHHHH----HHHHHHHHHHhc-CCCeEEEecCceecCCC
Q 027007          141 QYERSKA----VADKIALQAASE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~-gi~~~~irpg~i~g~~~  176 (229)
                      .|+.||.    +++.+..++.++ |++++.++||.+.+|..
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence            5999999    567777777654 89999999999999863

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=3.5e-22  Score=171.05  Aligned_cols=169  Identities=26%  Similarity=0.335  Sum_probs=141.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC----C---CCCCeEEEEccCCChhhHHhhcCC--ccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   71 (229)
                      +||||||+|.||+++++++++.+ .++++++|++-++..+    .   +.....++.+|+.|.+.+.+++.+  +|+|+|
T Consensus       252 ~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfH  331 (588)
T COG1086         252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFH  331 (588)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEEE
Confidence            79999999999999999999988 6788999986542211    1   124678899999999999999997  999999


Q ss_pred             eCcc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH
Q 027007           72 TAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        72 ~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      +|+.  ++..+.+|.+.+++|+.||.|++++|...+ ++++|.+||..+..+                 .+.||.||.++
T Consensus       332 AAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~P-----------------tNvmGaTKr~a  393 (588)
T COG1086         332 AAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVNP-----------------TNVMGATKRLA  393 (588)
T ss_pred             hhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccCC-----------------chHhhHHHHHH
Confidence            9997  566778899999999999999999999985 899999999866533                 25699999999


Q ss_pred             HHHHHHHHhc----CCCeEEEecCceecCCCCchhHHHHHHhh
Q 027007          150 DKIALQAASE----GLPIVPVYPGVIYGPGKLTTGNLVAKLQW  188 (229)
Q Consensus       150 e~~~~~~~~~----gi~~~~irpg~i~g~~~~~~~~~~~~~~~  188 (229)
                      |.+.+.+++.    +-+++++|.|+|.|..+...+-|..+...
T Consensus       394 E~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~  436 (588)
T COG1086         394 EKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAE  436 (588)
T ss_pred             HHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHc
Confidence            9999998753    37899999999999987665555554443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-22  Score=164.66  Aligned_cols=162  Identities=22%  Similarity=0.239  Sum_probs=124.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+..+.+.+    . ....+.++.+|++|.+++.++++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4699999999999999999999999999999986432211    1 11367888999999998877654       5899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||+|+....       ..+++++.+++|+.++.++++.+.+.+  ..+++|++||..++.+...              .
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  147 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT--------------R  147 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC--------------c
Confidence            9999987322       112355679999999999999987643  2368999999877754322              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...+.+.+.+    .++++++++++||.+.++..
T Consensus       148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  188 (263)
T PRK06181        148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIR  188 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcc
Confidence            45999999777666554    45689999999999988753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.89  E-value=6.1e-22  Score=162.58  Aligned_cols=165  Identities=19%  Similarity=0.254  Sum_probs=115.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC---C
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP---W   79 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~---~   79 (229)
                      ||||||+||||++++++|+++|++|++++|+.+..+....   ..  ..|+.. +...+.+.++|+|||+|+....   +
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EG--YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---ee--eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            6899999999999999999999999999998765433221   11  112222 4455667889999999986432   1


Q ss_pred             C-CCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           80 L-PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        80 ~-~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      . ...+.++++|+.++.++++++...+. ..++++.||...|+.....+.+|+.+..+   ...|+..+...|.......
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~---~~~~~~~~~~~e~~~~~~~  151 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAG---DDFLAELCRDWEEAAQAAE  151 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCC---CChHHHHHHHHHHHhhhch
Confidence            1 13456789999999999999998753 23677777777888654444555542221   2235555555666655544


Q ss_pred             hcCCCeEEEecCceecCCC
Q 027007          158 SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~~  176 (229)
                      +.+++++++||+.+|||.+
T Consensus       152 ~~~~~~~ilR~~~v~G~~~  170 (292)
T TIGR01777       152 DLGTRVVLLRTGIVLGPKG  170 (292)
T ss_pred             hcCCceEEEeeeeEECCCc
Confidence            5689999999999999964

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.4e-23  Score=168.20  Aligned_cols=161  Identities=19%  Similarity=0.119  Sum_probs=123.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++|||||+|+||++++++|+++|++|++.+|++++.+..... ..++++.+|++|++++.++++       ++|++|||
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   85 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNN   85 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            3799999999999999999999999999999987554332111 146788999999998765543       57999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++.+.+++|+.++.++++.+.+.+   +.++||++||..++.+.++              ...|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  151 (273)
T PRK07825         86 AGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG--------------MATYC  151 (273)
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC--------------CcchH
Confidence            997321      223466789999999999999887653   2358999999877654332              24599


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      .+|.    +.+.+..++.+.|+++++++||.+.++.
T Consensus       152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~  187 (273)
T PRK07825        152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL  187 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh
Confidence            9997    4455556666779999999999997764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=8.2e-23  Score=164.99  Aligned_cols=195  Identities=15%  Similarity=0.119  Sum_probs=137.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|+++..+.+.     ....+.++.+|++|.+++.++++       ++|+
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            37999999999999999999999999999999865432211     11357889999999998876654       4699


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||++|....      +.+++++.+++|+.++.++++.+.+.+   ..+++|++||..+..+.++              .
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~  157 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG--------------D  157 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC--------------c
Confidence            9999996321      223567789999999999998887643   2468999999876543322              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.++    .++.+.|++++.|+||.+.++.....  .......... ..+.++...+++++.+..|+
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l  233 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQ-RTPLGRWGRPEEIAGAAVFL  233 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            44999999665554    44556699999999999999863211  1111111211 12345566677777666553

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-22  Score=161.14  Aligned_cols=192  Identities=19%  Similarity=0.204  Sum_probs=134.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+|+||++++++|+++|++|+++.|+.+. .+.    + ....++.++++|++|.+++.++++       ++|+
T Consensus         7 ~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937          7 VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999888775431 111    1 112367889999999998877765       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||+||....      ..+++++.+++|+.++.++++++.+.+. .+++|++||.....+.+.              .+.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~  152 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG--------------YGP  152 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC--------------Cch
Confidence            9999997421      2235667899999999999999987643 248999998765533221              245


Q ss_pred             HHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCC--chhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKL--TTGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      |+.+|...+.+++.+    ...|+++++++||.+.++...  ........ +.. ..+..+...+++++..+.|
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~d~a~~~~~  224 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQ-LAG-LAPLERLGTPEEIAAAVAF  224 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHH-HHh-cCCCCCCCCHHHHHHHHHH
Confidence            999999777666554    456899999999999888621  11222222 111 2223445566666655444

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=5.1e-23  Score=165.48  Aligned_cols=162  Identities=20%  Similarity=0.142  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++++||||+|+||++++++|+++|++|+++ .|+.++.+++    . ....+.++++|++|++++.++++       .+|
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999999999999999999998764 6654332211    1 12357889999999998877665       479


Q ss_pred             EEEEeCcccC--C----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVE--P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+||...  +    ..++++..+++|+.++.++++++.+.+   +.++||++||...+.+.+.              
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  150 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN--------------  150 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--------------
Confidence            9999998632  1    122345578899999999999998754   2359999999765543221              


Q ss_pred             cCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|.+.+.+++.+    .++|+++++++||.+.++..
T Consensus       151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~  192 (250)
T PRK08063        151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDAL  192 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchh
Confidence            245999999777776654    35689999999999998763

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.4e-23  Score=167.67  Aligned_cols=162  Identities=23%  Similarity=0.241  Sum_probs=124.7

Q ss_pred             CE-EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC---CCCeEEEEccCCChhhHHhhcC--------CccE
Q 027007            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF--------GCHV   68 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~--------~~d~   68 (229)
                      || +|||||+|+||++++++|+++|++|++++|+.+..+++..   ...++++++|++|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            54 9999999999999999999999999999998765433211   2368899999999998876654        4699


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..+..+...              .
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  146 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG--------------L  146 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC--------------c
Confidence            9999997432      223567789999999999999987643   2358999999765543322              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|+..+.+.+.+    .++|+++++++||.+.++..
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~  187 (260)
T PRK08267        147 AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAML  187 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccc
Confidence            45999999766655554    45689999999999988753

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.8e-23  Score=165.17  Aligned_cols=195  Identities=19%  Similarity=0.171  Sum_probs=136.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC---CCC-CCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~---~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++||||+|+||++++++|+++|++|++++|+....+   .+. ....+.++++|+++.+++.++++       ++|+||
T Consensus         8 ~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi   87 (263)
T PRK08226          8 TALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILV   87 (263)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6899999999999999999999999999999753111   111 12357789999999998877654       579999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccccC
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |+||....      +.+++++.+++|+.++.++++++.+.+   ..+++|++||..+. .+.+.              ..
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------------~~  153 (263)
T PRK08226         88 NNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG--------------ET  153 (263)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC--------------cc
Confidence            99996321      223456679999999999999987643   23589999997542 11111              24


Q ss_pred             cHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch--------hHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      .|+.+|...+.+++.+    .+.|++++.++||.+.+|.....        .......+.. ..+..+...+++++..+.
T Consensus       154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~va~~~~  232 (263)
T PRK08226        154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK-AIPLRRLADPLEVGELAA  232 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc-cCCCCCCCCHHHHHHHHH
Confidence            5999999666555544    45689999999999999853211        0111111111 223456678888888777


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       233 ~l~  235 (263)
T PRK08226        233 FLA  235 (263)
T ss_pred             HHc
Confidence            764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=6.7e-23  Score=164.67  Aligned_cols=194  Identities=19%  Similarity=0.185  Sum_probs=131.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||+++++.|+++|++|+++.+ ++++.+..    . ....+.++++|++|.+++.++++       ++|+
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999987754 33322111    1 11357889999999988866543       5899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |||+||....       +.++++..+++|+.++..+++.+.+.+.      .++||++||..++.+....          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----------  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE----------  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC----------
Confidence            9999996321       1234566799999999999877665421      2369999997654322110          


Q ss_pred             ccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCc--hhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.+|...+.+++.    +.++|+++++++||.+.+|....  ...... .. ....+..+...+++++..+.|
T Consensus       154 ---~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~-~~-~~~~~~~~~~~~e~va~~~~~  228 (248)
T PRK06947        154 ---YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAA-RL-GAQTPLGRAGEADEVAETIVW  228 (248)
T ss_pred             ---CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHH-HH-hhcCCCCCCcCHHHHHHHHHH
Confidence               12499999966655544    44568999999999999996421  111111 11 112223455667777776665


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       229 l  229 (248)
T PRK06947        229 L  229 (248)
T ss_pred             H
Confidence            4

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=2.9e-22  Score=160.86  Aligned_cols=194  Identities=18%  Similarity=0.145  Sum_probs=135.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----CCC-CCCeEEEEccCCChhhHHhhcCC-------ccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LPS-EGALELVYGDVTDYRSLVDACFG-------CHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~-------~d~   68 (229)
                      +++||||+|+||++++++|+++|++|+++.++. +..++    +.. ..++.++.+|++|.+++.+++++       +|+
T Consensus         8 ~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935          8 VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999998765532 22211    111 13578899999999988777653       799


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||+|+....      +.+++++.+++|+.++.++++++.+.+   ..+++|++||..++.+..+              .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  153 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG--------------Q  153 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC--------------C
Confidence            9999997432      124567789999999999999998652   2359999999766543211              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+.    .++.+.|+++++++||.+.++............... ....+++..++|++.+..|+
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~edva~~~~~~  227 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVA-KIPKKRFGQADEIAKGVVYL  227 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHH-hCCCCCCcCHHHHHHHHHHH
Confidence            45999999655554    445556999999999999987533222211222222 22234567777777665553

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-22  Score=164.08  Aligned_cols=195  Identities=19%  Similarity=0.173  Sum_probs=136.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+|+||++++++|+++|++|+++.|+... .+.    +. ....+.++.+|++|.+++.++++       ++|+
T Consensus         9 ~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936          9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999998885421 111    11 11356788999999998876654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||+||....      +.+++++.+++|+.++..+++.+.+.+    ..+++|++||...+.+.+.              
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  154 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL--------------  154 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC--------------
Confidence            9999997322      123466789999999998887765542    2358999999755433221              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|+    +++.++.++.++|+++++|+||.+.+|.....  ........ ....+.++...+++++.++.|+-
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~  232 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADV-ESMIPMGYIGKPEEIAAVAAWLA  232 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHc
Confidence            245999996    55666667777899999999999999864221  11111111 12233556777888887776654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.89  E-value=2.9e-22  Score=164.43  Aligned_cols=185  Identities=30%  Similarity=0.375  Sum_probs=140.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCC------CCCC---------CCCCCeEEEEccCCC------hhh
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD------ISGL---------PSEGALELVYGDVTD------YRS   58 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~------~~~~---------~~~~~~~~~~~D~~~------~~~   58 (229)
                      +++|+||||||+|+.++++|+.+- .+|+|+.|..+.      ++..         ....+++.+.+|+..      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            589999999999999999999875 599999997652      1111         112588999999995      356


Q ss_pred             HHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCC------CCc
Q 027007           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE------NQV  132 (229)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~------~~~  132 (229)
                      +.++.+.+|.|||+|+.++.. ..++++...|+.||..+++.|.... .|.+.|+||.+++........++      +..
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v-~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~  158 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHV-FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTR  158 (382)
T ss_pred             HHHHhhhcceEEecchhhccc-CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccccc
Confidence            778888899999999987643 4567899999999999999998763 56799999998876533211111      111


Q ss_pred             cccccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCC---CchhHHHHHHh
Q 027007          133 HEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK---LTTGNLVAKLQ  187 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~---~~~~~~~~~~~  187 (229)
                      ..-..+..+|+.||+.+|.++++....|++++++|||.+-|+..   .....|..+++
T Consensus       159 ~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv  216 (382)
T COG3320         159 NVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLV  216 (382)
T ss_pred             cccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHH
Confidence            22234567899999999999999998899999999999999854   23344544444

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.8e-22  Score=160.52  Aligned_cols=162  Identities=23%  Similarity=0.239  Sum_probs=123.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-CC----C-CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----L-PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      |++|||||+|+||++++++|+++|++|+++.|+..+. +.    . ....+++++.+|++|.+++.++++       ++|
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   86 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRID   86 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCC
Confidence            3799999999999999999999999998877764321 11    0 112367889999999998877664       579


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc---CCCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+||....      ..+++++.+++|+.++.++++.+.+.   ...+++|++||..++.+...              
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~--------------  152 (249)
T PRK12825         87 ILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG--------------  152 (249)
T ss_pred             EEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC--------------
Confidence            99999996432      22346678999999999999998543   23569999999877643221              


Q ss_pred             cCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|...+.+++.+    .+.|++++++|||.++|+..
T Consensus       153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (249)
T PRK12825        153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMK  194 (249)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcc
Confidence            245999999776666544    34689999999999999975

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-22  Score=162.66  Aligned_cols=161  Identities=23%  Similarity=0.246  Sum_probs=121.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      +|+||||+|+||++++++|+++|++|++++|+..+.+........+++++|++|.+++.++++       ++|+|||+||
T Consensus         9 ~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   88 (255)
T PRK06057          9 VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAG   88 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999976543322111123578999999999877765       5799999998


Q ss_pred             ccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEcccee-eecCCCcccCCCCccccccccCcH
Q 027007           75 LVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        75 ~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ....        +.+.+++.+++|+.++.++++.+.+.+   ..+++|++||..+ ++...+              ...|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~--------------~~~Y  154 (255)
T PRK06057         89 ISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS--------------QISY  154 (255)
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC--------------Ccch
Confidence            6421        112366789999999999998886532   2358999998654 332111              2349


Q ss_pred             HHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.+|+    +++.+++++.++|+++++++||++.+|..
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  192 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL  192 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence            99997    55556666777799999999999999864

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.2e-22  Score=162.63  Aligned_cols=161  Identities=20%  Similarity=0.213  Sum_probs=117.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC--------CCC-CCCeEEEEccCCChhhHHhhcC-------C
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------LPS-EGALELVYGDVTDYRSLVDACF-------G   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--------~~~-~~~~~~~~~D~~~~~~~~~~~~-------~   65 (229)
                      +++||||+|+||++++++|+++|++|+++.++..+..+        +.. ...++++++|+++++++.++++       +
T Consensus        10 ~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   89 (257)
T PRK12744         10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGR   89 (257)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCC
Confidence            69999999999999999999999997777765322111        110 1257889999999999877654       5


Q ss_pred             ccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           66 CHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        66 ~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|+|||+||...      .+.+++++.+++|+.++..+++++.+.+. .+++++++|+.+....+              .
T Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~--------------~  155 (257)
T PRK12744         90 PDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP--------------F  155 (257)
T ss_pred             CCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC--------------C
Confidence            899999999632      12235777899999999999999987653 24677664332221111              1


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|++.+.+++.++    ++|+++++++||.+.++..
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~  197 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFF  197 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchh
Confidence            2459999997766666554    4589999999999988753

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-22  Score=168.08  Aligned_cols=198  Identities=16%  Similarity=0.046  Sum_probs=135.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC----------CCC----CC-CCCeEEEEccCCChhhHHhhcC--
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----------SGL----PS-EGALELVYGDVTDYRSLVDACF--   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~----------~~~----~~-~~~~~~~~~D~~~~~~~~~~~~--   64 (229)
                      +++||||+++||++++++|+++|++|++++|+....          +.+    .. ...+.++++|++|++++.++++  
T Consensus        10 ~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   89 (305)
T PRK08303         10 VALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERI   89 (305)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            689999999999999999999999999999974321          111    11 1246788999999998876653  


Q ss_pred             -----CccEEEEeC-ccc------CC----CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCc
Q 027007           65 -----GCHVIFHTA-ALV------EP----WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        65 -----~~d~vi~~a-~~~------~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~  125 (229)
                           ++|++|||| |..      .+    +.+++.+.+++|+.+++.+++++.+.+.   .++||++||..+.......
T Consensus        90 ~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~  169 (305)
T PRK08303         90 DREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHY  169 (305)
T ss_pred             HHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCC
Confidence                 589999999 631      11    1234667899999999999999987652   2589999996542111000


Q ss_pred             ccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch----hHHHHHHhhcccceeeee
Q 027007          126 IADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT----GNLVAKLQWKKVDLVKDI  197 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~----~~~~~~~~~~~~~~~~~~  197 (229)
                                 .....|+.+|.    +++.++.+++++||++++|.||++.++.....    ........ .......+.
T Consensus       170 -----------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~  237 (305)
T PRK08303        170 -----------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAIS  237 (305)
T ss_pred             -----------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccC
Confidence                       01235999999    55666677777899999999999988852110    00000111 111112445


Q ss_pred             hhhHhhhhhhHHHH
Q 027007          198 FLLERMRHSCKFLT  211 (229)
Q Consensus       198 ~~~~~~~~~~~~l~  211 (229)
                      ..|++++.++.||-
T Consensus       238 ~~peevA~~v~fL~  251 (305)
T PRK08303        238 ETPRYVGRAVAALA  251 (305)
T ss_pred             CCHHHHHHHHHHHH
Confidence            67899998888774

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.2e-23  Score=170.97  Aligned_cols=160  Identities=20%  Similarity=0.183  Sum_probs=123.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.     ....+.++++|++|.+++.++++       .+|++
T Consensus        10 ~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~l   89 (334)
T PRK07109         10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTW   89 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            6899999999999999999999999999999865433221     11357789999999999877653       58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||+....      +.+++++.+++|+.++.++++.+.+.+.   .++||++||..++.+.+.              ..
T Consensus        90 InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~--------------~~  155 (334)
T PRK07109         90 VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL--------------QS  155 (334)
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc--------------ch
Confidence            999986321      2245677899999999998888776532   358999999988764322              24


Q ss_pred             cHHHHHHHHH----HHHHHHHh--cCCCeEEEecCceecCC
Q 027007          141 QYERSKAVAD----KIALQAAS--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e----~~~~~~~~--~gi~~~~irpg~i~g~~  175 (229)
                      .|+.+|...+    .+..++..  .++++++|+||.+.+|.
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~  196 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ  196 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence            5999999554    44455543  36999999999999885

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.89  E-value=1.3e-22  Score=169.33  Aligned_cols=172  Identities=19%  Similarity=0.159  Sum_probs=121.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.    +. ....+.++++|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~l   87 (322)
T PRK07453          8 TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDAL   87 (322)
T ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            59999999999999999999999999999997654321    11 12357889999999999877664       38999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecC-CCc---cc--CCCC
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGST-DGY---IA--DENQ  131 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~-~~~---~~--~~~~  131 (229)
                      |||||....       +.++++..+++|+.++.++++++.+.+.     .+|||++||...+... .+.   +.  +...
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (322)
T PRK07453         88 VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGD  167 (322)
T ss_pred             EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhh
Confidence            999996321       2235678899999999999999877531     2499999997654321 000   00  0000


Q ss_pred             ----------c-----cccccccCcHHHHHHHHHHHHHHHH-----hcCCCeEEEecCceec
Q 027007          132 ----------V-----HEEKYFCTQYERSKAVADKIALQAA-----SEGLPIVPVYPGVIYG  173 (229)
Q Consensus       132 ----------~-----~~~~~~~~~Y~~sK~~~e~~~~~~~-----~~gi~~~~irpg~i~g  173 (229)
                                +     ..+..+...|+.||.+.+.++++++     .+|+++++++||++++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        168 LSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             hhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                      0     0011234679999986555444443     2489999999999974

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.5e-23  Score=166.30  Aligned_cols=162  Identities=19%  Similarity=0.196  Sum_probs=125.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+..    . ....+.++++|++|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7899999999999999999999999999999986543321    1 12367889999999998877654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+.+.              .
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  146 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA--------------M  146 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC--------------c
Confidence            9999997432      123466789999999999988876532   2469999999877654332              2


Q ss_pred             CcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|+.    ++.++.++...|+++++++||.+.++..
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  187 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLL  187 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcc
Confidence            459999995    4555555556699999999999999864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=6.8e-22  Score=158.34  Aligned_cols=194  Identities=23%  Similarity=0.205  Sum_probs=136.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+|+||++++++|+++|++|++++|+... .+.    . ....++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            78999999999999999999999999999997431 110    1 111357889999999998877654       4899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||++|...      .+.+++++.+++|+.++.++++++.+..   ..++||++||..++.+...              .
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------~  149 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG--------------Q  149 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC--------------C
Confidence            999998632      1234577889999999999988775532   2469999999877654322              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|.+.+.+.    .++.+.|+++++++||.+.+|............+... .+.+....+++++....|+
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l  223 (245)
T PRK12824        150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQ-IPMKRLGTPEEIAAAVAFL  223 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            34999999555554    4444668999999999999986432222222222222 2234556677777665544

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-22  Score=163.05  Aligned_cols=161  Identities=17%  Similarity=0.115  Sum_probs=122.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC----CccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF----GCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi   70 (229)
                      |+++||||+|+||++++++|+++|++|++++|++++.+...      ...+++++++|++|.+++.++++    ++|+||
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47999999999999999999999999999999875433211      12367899999999999877665    469999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |++|....      +.+++.+.+++|+.++.++++++.+.+   +.+++|++||..+..+.+.              ...
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  147 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS--------------NYV  147 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC--------------Ccc
Confidence            99986321      122345679999999999999987753   2468999999765433221              134


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCC
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~  175 (229)
                      |+.+|...+.+.+.    +.+.|+++++++||.++++.
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~  185 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPM  185 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChh
Confidence            99999966555544    45669999999999999984

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.89  E-value=2.8e-22  Score=160.88  Aligned_cols=193  Identities=21%  Similarity=0.198  Sum_probs=133.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCC----CCCC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDI----SGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      .++||||+|+||++++++|+++|++|++..+. ..+.    +.+. ....+..+.+|++|.+++.++++       ++|+
T Consensus         5 ~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          5 IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999886542 2211    1111 11256678999999998876654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..+..+..+              .
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  150 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG--------------Q  150 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC--------------C
Confidence            9999997422      234577889999999999988887643   2358999999765433221              2


Q ss_pred             CcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...    +.+++++..+|+++++++||.+.+|..... ........ . ..+..+...+++++..+.|+
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~v~~~~~~l  224 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIV-A-TIPVRRLGSPDEIGSIVAWL  224 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHH-h-cCCccCCcCHHHHHHHHHHH
Confidence            4599999954    455555566799999999999999864321 22222211 1 12344566777777666654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.89  E-value=6.1e-23  Score=165.93  Aligned_cols=195  Identities=16%  Similarity=0.163  Sum_probs=137.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCCCCCCCC----C---CCCCeEEEEccCCChhhHHhhcCC-----
Q 027007            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACFG-----   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~~~~~~~~~~-----   65 (229)
                      .++||||+++||++++++|++    .|++|++++|+.++.+.+    .   ....+.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            479999999999999999997    799999999986543321    1   123578899999999988776532     


Q ss_pred             ------ccEEEEeCcccCC----C-----CCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCCc
Q 027007           66 ------CHVIFHTAALVEP----W-----LPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        66 ------~d~vi~~a~~~~~----~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~  125 (229)
                            .|+||||||....    .     .+++++.+++|+.++..+++.+.+.+.     .++||++||..++.+.+. 
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~-  160 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG-  160 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC-
Confidence                  2589999996321    1     134567899999999999998877532     248999999876543322 


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh-----HHHHHHhhcccceeee
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG-----NLVAKLQWKKVDLVKD  196 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~-----~~~~~~~~~~~~~~~~  196 (229)
                                   ...|+.+|...+.++    .++.++|+++++++||++-+++.....     ..... ......+.++
T Consensus       161 -------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~  226 (256)
T TIGR01500       161 -------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRK-GLQELKAKGK  226 (256)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHH-HHHHHHhcCC
Confidence                         245999999655555    445567899999999999888532100     00111 1112233466


Q ss_pred             ehhhHhhhhhhHHHH
Q 027007          197 IFLLERMRHSCKFLT  211 (229)
Q Consensus       197 ~~~~~~~~~~~~~l~  211 (229)
                      ...|+|++.++.|+-
T Consensus       227 ~~~p~eva~~~~~l~  241 (256)
T TIGR01500       227 LVDPKVSAQKLLSLL  241 (256)
T ss_pred             CCCHHHHHHHHHHHH
Confidence            788999988877764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.89  E-value=2.9e-22  Score=160.13  Aligned_cols=193  Identities=18%  Similarity=0.179  Sum_probs=137.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++||||+|+||++++++|+++|++|++++|..+ +.+.    +.. ..++.++++|++|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999987532 2111    111 1357889999999998876654       47999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHH-hc---CCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAK-ET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~-~~---~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||++|...      .+.++++..+++|+.++.++++++. +.   ...++||++||..++.+.+.              .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  146 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG--------------Q  146 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC--------------C
Confidence            99998632      1234677889999999999998764 22   12358999999766544322              2


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|...+    .++.++.++|++++.++||.+.++............ . ...++++.+.+++++....|+-
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~va~~~~~l~  220 (239)
T TIGR01831       147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA-L-KTVPMNRMGQPAEVASLAGFLM  220 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH-H-hcCCCCCCCCHHHHHHHHHHHc
Confidence            34999999554    555555667999999999999998753322211111 1 2234567788888888777764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=3.9e-22  Score=173.89  Aligned_cols=163  Identities=26%  Similarity=0.260  Sum_probs=122.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------------CCCCeEEEEccCCChhhHHhhcCCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------------SEGALELVYGDVTDYRSLVDACFGCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~~~~~~~~d   67 (229)
                      +||||||+|+||++++++|+++|++|++++|+.++.+.+.              ...+++++++|++|.+++.++++++|
T Consensus        82 vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiD  161 (576)
T PLN03209         82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNAS  161 (576)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCCC
Confidence            5899999999999999999999999999999876532210              01257899999999999999999999


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      +|||++|.......++...+++|+.++.++++++.+.+ .+|||++||..+....  ...  .. ..   ....|...|.
T Consensus       162 iVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g--~p~--~~-~~---sk~~~~~~Kr  232 (576)
T PLN03209        162 VVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVG--FPA--AI-LN---LFWGVLCWKR  232 (576)
T ss_pred             EEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccC--ccc--cc-hh---hHHHHHHHHH
Confidence            99999987433223466778999999999999998874 6899999998653111  000  00 00   0123555565


Q ss_pred             HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          148 VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       148 ~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+|..+   ...|+++++||||+++++..
T Consensus       233 aaE~~L---~~sGIrvTIVRPG~L~tp~d  258 (576)
T PLN03209        233 KAEEAL---IASGLPYTIVRPGGMERPTD  258 (576)
T ss_pred             HHHHHH---HHcCCCEEEEECCeecCCcc
Confidence            555544   35799999999999998854

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.8e-22  Score=161.76  Aligned_cols=189  Identities=19%  Similarity=0.179  Sum_probs=131.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------------CCCCeEEEEccCCChhhHHhhcC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------------SEGALELVYGDVTDYRSLVDACF-----   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~-----   64 (229)
                      +++||||+|+||++++++|+++|++|++++|+.+....+.            ...++.++++|+++++++.++++     
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   87 (273)
T PRK08278          8 TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVER   87 (273)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999764322111            11357788999999998877654     


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                        ++|+|||+||....      +.+++++.+++|+.++.++++++.+.+.   .+++|++||.....+..         .
T Consensus        88 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~  158 (273)
T PRK08278         88 FGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW---------F  158 (273)
T ss_pred             hCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc---------c
Confidence              58999999997321      2234677899999999999999986532   34899998864332210         0


Q ss_pred             ccccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecC-ceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          134 EEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPG-VIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg-~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                         .....|+.||++.+.+++.    +.++|+++++|+|| .+.++...   .+     ........+...+++++..+.
T Consensus       159 ---~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~---~~-----~~~~~~~~~~~~p~~va~~~~  227 (273)
T PRK08278        159 ---APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVR---NL-----LGGDEAMRRSRTPEIMADAAY  227 (273)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHH---hc-----ccccccccccCCHHHHHHHHH
Confidence               0124599999977666654    44569999999999 45554211   00     011112334567777777666


Q ss_pred             HH
Q 027007          209 FL  210 (229)
Q Consensus       209 ~l  210 (229)
                      ++
T Consensus       228 ~l  229 (273)
T PRK08278        228 EI  229 (273)
T ss_pred             HH
Confidence            54

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.7e-22  Score=160.58  Aligned_cols=162  Identities=18%  Similarity=0.142  Sum_probs=119.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCC-CCC----CCC--CCCeEEEEccCCChhhHHhhcC------Cc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD-ISG----LPS--EGALELVYGDVTDYRSLVDACF------GC   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~-~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   66 (229)
                      +++|||||+|+||++++++|+++| ++|++++|+.++ .+.    +..  ...++++++|++|.+++.++++      ++
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            479999999999999999999995 999999998764 221    111  1257899999999888655443      69


Q ss_pred             cEEEEeCcccCCCCC---Cc---hhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           67 HVIFHTAALVEPWLP---DP---SRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        67 d~vi~~a~~~~~~~~---~~---~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |++||++|.......   ++   .+.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.             
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~-------------  155 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS-------------  155 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC-------------
Confidence            999999987432211   11   2468999999998777665442   2469999999865432211             


Q ss_pred             ccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ...|+.||++..    .+..++..+|+++++++||.+.++..
T Consensus       156 -~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~  197 (253)
T PRK07904        156 -NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS  197 (253)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh
Confidence             234999999554    45555667799999999999999743

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-22  Score=164.92  Aligned_cols=194  Identities=19%  Similarity=0.136  Sum_probs=133.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    . ....+.++.+|++|.+++.++++       .+|+|
T Consensus        11 ~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~v   90 (264)
T PRK07576         11 NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVL   90 (264)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999976543221    1 11256788999999998877654       47999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||+|+...      ...+++++.+++|+.++.++++++.+..  ..++||++||..++.+.+.              ...
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~--------------~~~  156 (264)
T PRK07576         91 VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM--------------QAH  156 (264)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC--------------ccH
Confidence            99997521      1223566789999999999999987753  2359999999766533221              245


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCceec-CCCCc-h-hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYG-PGKLT-T-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |+.+|...+.+++.    +..+|++++.++||.+.+ +.... . ......... ...+.++...+++++....|+
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l  231 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA-QSVPLKRNGTKQDIANAALFL  231 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH-hcCCCCCCCCHHHHHHHHHHH
Confidence            99999966666554    455789999999999874 32110 0 011111111 122345566677777665555

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.7e-22  Score=163.51  Aligned_cols=162  Identities=19%  Similarity=0.207  Sum_probs=122.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC--CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      |+++||||+|+||++++++|+++|++|++++|+.+..+..    ..  ...+.++++|++|.+++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999976432221    11  1124557899999988765543       479


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||+|....      +.++++..+++|+.++.++++++.+.+    ..++||++||..++.+.+.             
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~-------------  147 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW-------------  147 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC-------------
Confidence            99999986321      224567789999999999999987643    1358999999765433221             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ...|+.+|.    +.+.++.++.++|+++++++||.+.+|..
T Consensus       148 -~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~  189 (272)
T PRK07832        148 -HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV  189 (272)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence             234999998    55555666667799999999999999853

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=3.2e-22  Score=160.04  Aligned_cols=195  Identities=23%  Similarity=0.203  Sum_probs=135.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      |++|||||+|+||++++++|+++|++|++++|++.+.+..    . ...++.++.+|++|++++.++++       .+|+
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3799999999999999999999999999999987543221    1 11357888999999998877665       3699


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||++|....      +.+++.+.++.|+.++.++++++.+..   ..++||++||.....+...              .
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~--------------~  151 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG--------------Q  151 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC--------------C
Confidence            9999987432      122456679999999999999986532   3469999999754432111              2


Q ss_pred             CcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+++.++    +.++++++++||.++++..........+.. ...........+++++..+.++
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~~  225 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEI-LKEIPLGRLGQPEEVANAVAFL  225 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHH-HhcCCCCCCcCHHHHHHHHHHH
Confidence            459999986666655543    458999999999999997532222222211 1122224445566666555443

>PRK06194 hypothetical protein; Provisional

Probab=99.88  E-value=2.5e-22  Score=164.80  Aligned_cols=160  Identities=16%  Similarity=0.104  Sum_probs=122.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+||||++++++|+++|++|++++|+.+..+..    .. ...+.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~v   87 (287)
T PRK06194          8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLL   87 (287)
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999976443221    11 2357789999999999887765       47999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CC-----ceEEEEccceeeecCCCcccCCCCccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TV-----EKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~-----~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+.+    ..     +++|++||..++.+.+.          
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  157 (287)
T PRK06194         88 FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA----------  157 (287)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC----------
Confidence            999997432      224566779999999999998875532    11     58999999877754322          


Q ss_pred             cccccCcHHHHHHHHHHHHHHHH----h--cCCCeEEEecCceecCC
Q 027007          135 EKYFCTQYERSKAVADKIALQAA----S--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~----~--~gi~~~~irpg~i~g~~  175 (229)
                          .+.|+.+|.+.+.+++.+.    .  .+++++.+.||.+.++.
T Consensus       158 ----~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        158 ----MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence                2459999998777766543    2  25889999999997764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.2e-22  Score=158.68  Aligned_cols=164  Identities=20%  Similarity=0.188  Sum_probs=123.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~~~   76 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.....+.++.+|++|.+++.++++     ++|+|||+||..
T Consensus         3 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~   82 (225)
T PRK08177          3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGIS   82 (225)
T ss_pred             EEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCccc
Confidence            599999999999999999999999999999987654433222356788999999998877665     489999999874


Q ss_pred             CC--------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ..        ..+++.+.+++|+.++..+++++.+.+.  ..+++++||..+......  .         .....|+.+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--~---------~~~~~Y~~sK  151 (225)
T PRK08177         83 GPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--G---------GEMPLYKASK  151 (225)
T ss_pred             CCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--C---------CCccchHHHH
Confidence            21        1234667789999999999999877642  247888888644321110  0         0123499999


Q ss_pred             HHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          147 AVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       147 ~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+.+.+++.+    .+++++++.++||++-++..
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~  185 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG  185 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCC
Confidence            9777666554    45689999999999999864

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-22  Score=160.43  Aligned_cols=160  Identities=19%  Similarity=0.174  Sum_probs=124.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.     ....+.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (241)
T PRK07454          8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVL   87 (241)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999865432211     11367889999999998876654       48999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+||....      +.+++++.+++|+.++.++++.+.+.+   +.+++|++||..++.+...              ..
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  153 (241)
T PRK07454         88 INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ--------------WG  153 (241)
T ss_pred             EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC--------------cc
Confidence            999986321      223567789999999999999886643   2358999999877654322              24


Q ss_pred             cHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCC
Q 027007          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~  175 (229)
                      .|+.+|.+.+.+.+.    +.++|+++++|+||.+.+|.
T Consensus       154 ~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        154 AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            599999977766554    44569999999999999886

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-22  Score=162.77  Aligned_cols=195  Identities=13%  Similarity=0.097  Sum_probs=137.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCC--CCCeEEEEccCCChhhHHhhcC---CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~   72 (229)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+.    +..  ..++.++.+|++|.+++.++++   ++|++|||
T Consensus         9 ~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~   88 (259)
T PRK06125          9 RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVNN   88 (259)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999998654332    111  1357789999999999877654   58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+.   .+++|++||..+..+...              ...|+
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~~y~  154 (259)
T PRK06125         89 AGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD--------------YICGS  154 (259)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC--------------chHhH
Confidence            986321      2246778899999999999999876542   358999998765432221              13489


Q ss_pred             HHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCch----------hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          144 RSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT----------GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       144 ~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      .+|...+.+.+    ++.++|++++.|+||.+.+|.....          ........... .+.++...+++++.++.|
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~  233 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG-LPLGRPATPEEVADLVAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc-CCcCCCcCHHHHHHHHHH
Confidence            99996655554    4446699999999999998842110          00000111111 234566778888888776


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +.
T Consensus       234 l~  235 (259)
T PRK06125        234 LA  235 (259)
T ss_pred             Hc
Confidence            63

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.88  E-value=7.8e-22  Score=158.90  Aligned_cols=160  Identities=20%  Similarity=0.205  Sum_probs=121.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhh-------cCCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDA-------CFGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~-------~~~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++       +.++|+|
T Consensus         3 ~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   82 (255)
T TIGR01963         3 TALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDIL   82 (255)
T ss_pred             EEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999999865332211     113578899999999966544       3458999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||+|+....      +.+++++.+..|+.++..+++.+.+.+   ..+++|++||...+.+.+.              ..
T Consensus        83 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~--------------~~  148 (255)
T TIGR01963        83 VNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF--------------KS  148 (255)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC--------------Cc
Confidence            999987432      112355678899999999999886432   3469999999866544321              24


Q ss_pred             cHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      .|+.+|...+.+++.++    +.+++++.+|||.+++|.
T Consensus       149 ~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       149 AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            59999997776665543    458999999999999985

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.7e-22  Score=160.49  Aligned_cols=160  Identities=25%  Similarity=0.252  Sum_probs=122.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----PSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~~   75 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+     .....+.++++|++|++++.+++. ++|+||||||.
T Consensus         4 ~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~   83 (257)
T PRK09291          4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGI   83 (257)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCc
Confidence            799999999999999999999999999999975432221     111257888999999999988876 79999999997


Q ss_pred             cCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ...      +.+++++.+++|+.++.++.+.+.+..   ..++||++||..++...+.              ...|+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~--------------~~~Y~~sK  149 (257)
T PRK09291         84 GEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF--------------TGAYCASK  149 (257)
T ss_pred             CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC--------------cchhHHHH
Confidence            422      123456778999999998888765431   2469999999865433211              24599999


Q ss_pred             HHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          147 AVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       147 ~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      ...+.+++.+    .+.|+++++++||++.++.
T Consensus       150 ~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~  182 (257)
T PRK09291        150 HALEAIAEAMHAELKPFGIQVATVNPGPYLTGF  182 (257)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence            9877766554    3469999999999987764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.88  E-value=1.9e-22  Score=161.67  Aligned_cols=162  Identities=20%  Similarity=0.234  Sum_probs=118.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++ .|+.++.++.    .. ...++.+++|++|.+++.++++       .+|+
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~   82 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAA   82 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999875 4544322211    11 1257789999999998877665       3689


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC------CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |||+|+....       +.++++..+++|+.++.++++++.+.+      ..++||++||..++.+.+..          
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~----------  152 (247)
T PRK09730         83 LVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE----------  152 (247)
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc----------
Confidence            9999996311       123456789999999999988876642      12479999998665432211          


Q ss_pred             ccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          136 KYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                         ...|+.+|...+.+++    ++.++|+++++++||.+|||..
T Consensus       153 ---~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        153 ---YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH  194 (247)
T ss_pred             ---ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence               1239999986666554    4455699999999999999964

>PRK08264 short chain dehydrogenase; Validated

Probab=99.88  E-value=7.8e-22  Score=157.53  Aligned_cols=158  Identities=21%  Similarity=0.168  Sum_probs=125.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcc-c
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL-V   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~-~   76 (229)
                      +++||||+|+||++++++|+++|+ +|++++|+.++.++  ....++++++|++|.+++.++++   .+|+|||+||. .
T Consensus         8 ~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   85 (238)
T PRK08264          8 VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFR   85 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            699999999999999999999998 99999998765543  22368899999999999888776   48999999997 2


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      ..      +.+++.+.+++|+.++.++++++.+.+   ..+++|++||..++.+...              ...|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~~~y~~sK~  151 (238)
T PRK08264         86 TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN--------------LGTYSASKA  151 (238)
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC--------------chHhHHHHH
Confidence            11      224566789999999999999987542   2458999999877654322              245999999


Q ss_pred             HHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          148 VADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       148 ~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      ..+.+.+.++    +.|+++++++||.+.++.
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            7776665543    458999999999998874

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.8e-22  Score=164.41  Aligned_cols=163  Identities=18%  Similarity=0.247  Sum_probs=122.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..     ...+.++++|++|.+++.++++       ++|+
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            369999999999999999999999999999998654332211     1356789999999998877765       6899


Q ss_pred             EEEeCcccCCC--------CCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||.....        .++++..+++|+.++.++++++.+.+   ..++||++||..++....  +           
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--p-----------  187 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--P-----------  187 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--C-----------
Confidence            99999874221        12345679999999999999886532   246999999975543210  0           


Q ss_pred             ccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ....|+.+|++.+.+    +.++.++|+++++++||.+-++..
T Consensus       188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~  230 (293)
T PRK05866        188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI  230 (293)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence            124599999965555    445556699999999999988753

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6e-22  Score=154.25  Aligned_cols=148  Identities=24%  Similarity=0.194  Sum_probs=116.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~   77 (229)
                      |+++||||+|+||++++++|+++ ++|++++|+.+            .+++|++|.++++++++   ++|+|||+||...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            89999999999999999999999 99999998743            35889999999888765   6899999998632


Q ss_pred             C------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      .      +.+++++.+++|+.++.++++++.+.+. .++|+++||..+..+.+.              ...|+.+|...+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~~Y~~sK~a~~  133 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG--------------GASAATVNGALE  133 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC--------------chHHHHHHHHHH
Confidence            1      2345777899999999999999987642 358999998765433221              245999999655


Q ss_pred             HHHHHHH---hcCCCeEEEecCceecCC
Q 027007          151 KIALQAA---SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       151 ~~~~~~~---~~gi~~~~irpg~i~g~~  175 (229)
                      .+++.++   ++|++++.|+||.+-++.
T Consensus       134 ~~~~~la~e~~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        134 GFVKAAALELPRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHHccCCeEEEEEcCCcccCch
Confidence            5554433   569999999999997764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.88  E-value=1e-21  Score=167.66  Aligned_cols=153  Identities=24%  Similarity=0.347  Sum_probs=122.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC------C-CCCCCeEEEEccCCChhhHHhhcC----CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------L-PSEGALELVYGDVTDYRSLVDACF----GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------~-~~~~~~~~~~~D~~~~~~~~~~~~----~~d~v   69 (229)
                      |+||||||||+||++++++|+++|++|++++|+..+...      . ....+++++++|++|++++.++++    ++|+|
T Consensus        61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~V  140 (390)
T PLN02657         61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVV  140 (390)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEE
Confidence            689999999999999999999999999999998654321      1 112368899999999999999887    59999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      |||++....   .....+++|+.++.++++++.+.+ .++||++||.+++.+                 ...|..+|...
T Consensus       141 i~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~p-----------------~~~~~~sK~~~  199 (390)
T PLN02657        141 VSCLASRTG---GVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQKP-----------------LLEFQRAKLKF  199 (390)
T ss_pred             EECCccCCC---CCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccCc-----------------chHHHHHHHHH
Confidence            999875221   123457889999999999998875 679999999876532                 12388899988


Q ss_pred             HHHHHHHHhcCCCeEEEecCceecCC
Q 027007          150 DKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       150 e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      |..++. ...+++++++||+.+|++.
T Consensus       200 E~~l~~-~~~gl~~tIlRp~~~~~~~  224 (390)
T PLN02657        200 EAELQA-LDSDFTYSIVRPTAFFKSL  224 (390)
T ss_pred             HHHHHh-ccCCCCEEEEccHHHhccc
Confidence            887765 3458999999999999763

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3.2e-22  Score=159.92  Aligned_cols=161  Identities=18%  Similarity=0.212  Sum_probs=123.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    . ...++.++++|+++++++.++++       ++|+|
T Consensus         9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   88 (239)
T PRK07666          9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDIL   88 (239)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEE
Confidence            689999999999999999999999999999986432221    1 11357889999999999877765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||++|....      +.+++++.+++|+.++.++++++.+.+   ..+++|++||..++.+...              ..
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~  154 (239)
T PRK07666         89 INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV--------------TS  154 (239)
T ss_pred             EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC--------------Cc
Confidence            999986322      223456789999999999999887642   2458999999876644322              24


Q ss_pred             cHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCC
Q 027007          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .|+.+|.+.+.+++.    +.+.|+++++++||.+.++..
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  194 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA  194 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence            499999966655544    445699999999999999853

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.4e-22  Score=160.71  Aligned_cols=162  Identities=22%  Similarity=0.265  Sum_probs=122.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC---CCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+.+..   ..++.++.+|++|++++.++++       ++|+||
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   91 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLV   91 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            479999999999999999999999999999997654332211   1146889999999998877654       589999


Q ss_pred             EeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CC-ceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |+||....       ..+++.+.+++|+.++.++++++.+..   .. ++++++||.....+.+.              .
T Consensus        92 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~--------------~  157 (264)
T PRK12829         92 NNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG--------------R  157 (264)
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC--------------C
Confidence            99997521       123467889999999999999885531   22 56888887654322211              2


Q ss_pred             CcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...+.+++.++    ..++++++++||+++||+.
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            349999997776665544    4589999999999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=99.88  E-value=1e-22  Score=181.96  Aligned_cols=161  Identities=17%  Similarity=0.174  Sum_probs=126.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+.    . ...+.++++|++|++++.++++       .+|+
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            47999999999999999999999999999999865433211    1 1357889999999999877664       4899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+.    .++||++||.+++.+.+.              
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  461 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS--------------  461 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC--------------
Confidence            9999997421      2345777899999999999998876531    258999999988865432              


Q ss_pred             cCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      ...|+.||++    ++.++.++.++|+++++|+||.+-++.
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence            2459999995    455555666779999999999998875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=8.1e-22  Score=158.53  Aligned_cols=194  Identities=19%  Similarity=0.179  Sum_probs=136.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||+++++.|+++|++|++++|+.++.+..    . ....+.++++|+++.+++.++++       .+|+|
T Consensus         7 ~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   86 (253)
T PRK08217          7 VIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGL   86 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999986543221    1 12357789999999988766544       47999


Q ss_pred             EEeCcccCC---------------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCC
Q 027007           70 FHTAALVEP---------------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADEN  130 (229)
Q Consensus        70 i~~a~~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~  130 (229)
                      ||+||....               +.++++..+++|+.++..+.+.+.+..    ..+++|++||...++...       
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-------  159 (253)
T PRK08217         87 INNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG-------  159 (253)
T ss_pred             EECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC-------
Confidence            999986321               113456678999999999888776542    224799999876554321       


Q ss_pred             CccccccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhh
Q 027007          131 QVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       131 ~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                              ...|+.+|+..+.+++.+    .++|++++.++||.+.++............... ..+..++..+++++.+
T Consensus       160 --------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~  230 (253)
T PRK08217        160 --------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEK-MIPVGRLGEPEEIAHT  230 (253)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHh-cCCcCCCcCHHHHHHH
Confidence                    245999999777665554    456899999999999998653322211111111 2234556778888877


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.|+-
T Consensus       231 ~~~l~  235 (253)
T PRK08217        231 VRFII  235 (253)
T ss_pred             HHHHH
Confidence            76663

>TIGR02415 23BDH acetoin reductases

Probab=99.88  E-value=3e-22  Score=161.38  Aligned_cols=161  Identities=22%  Similarity=0.238  Sum_probs=122.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+    .. ...+.++.+|++|++++.+++.       .+|+|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999975432221    11 1357888999999998877653       47999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||+|+....      +.+++++.+++|+.++..+++++.+.+    ..+++|++||..+..+.+.              .
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  147 (254)
T TIGR02415        82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI--------------L  147 (254)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC--------------C
Confidence            999987321      224566789999999999988886542    1258999999765543322              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...+.+++.+    .+.|++++.++||.+.++..
T Consensus       148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~  188 (254)
T TIGR02415       148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW  188 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh
Confidence            45999999777666544    45589999999999988853

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.88  E-value=6.5e-22  Score=163.03  Aligned_cols=195  Identities=11%  Similarity=0.096  Sum_probs=132.8

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC---------------CCC---CCeEEEEccC--CChh--
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDISGL---------------PSE---GALELVYGDV--TDYR--   57 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---------------~~~---~~~~~~~~D~--~~~~--   57 (229)
                      .+|||||  +++||.++++.|+++|++|++ .|..++++..               ...   .....+.+|+  ++.+  
T Consensus        11 ~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   89 (303)
T PLN02730         11 RAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDV   89 (303)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccC
Confidence            5899999  799999999999999999988 5543322111               000   0135678888  4333  


Q ss_pred             ----------------hHHhhc-------CCccEEEEeCccc--------CCCCCCchhhhHhhHHHHHHHHHHHHhcCC
Q 027007           58 ----------------SLVDAC-------FGCHVIFHTAALV--------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT  106 (229)
Q Consensus        58 ----------------~~~~~~-------~~~d~vi~~a~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  106 (229)
                                      ++.+++       .++|+||||||..        +.+.++|++.+++|+.+++.+++++.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~  169 (303)
T PLN02730         90 PEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMN  169 (303)
T ss_pred             chhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            554443       3589999999642        113346888999999999999999988753


Q ss_pred             -CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecCCCCch-
Q 027007          107 -VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-  179 (229)
Q Consensus       107 -~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~-  179 (229)
                       .++||++||..+..+.+..             ...|+.||.    +++.++.++++ +||++++|.||.+.++..... 
T Consensus       170 ~~G~II~isS~a~~~~~p~~-------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~  236 (303)
T PLN02730        170 PGGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG  236 (303)
T ss_pred             cCCEEEEEechhhcCCCCCC-------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc
Confidence             2699999997655332211             124999999    45556666665 699999999999999864221 


Q ss_pred             --hHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          180 --GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       180 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                        .... ... ....++.+...|++++.++.|+-.
T Consensus       237 ~~~~~~-~~~-~~~~pl~r~~~peevA~~~~fLaS  269 (303)
T PLN02730        237 FIDDMI-EYS-YANAPLQKELTADEVGNAAAFLAS  269 (303)
T ss_pred             ccHHHH-HHH-HhcCCCCCCcCHHHHHHHHHHHhC
Confidence              1111 111 112234677889999988888753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.1e-22  Score=160.43  Aligned_cols=192  Identities=22%  Similarity=0.211  Sum_probs=135.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC---CCCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.   ....++++++|++|.+++.+++.       ++|+|||
T Consensus         4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~   83 (257)
T PRK07074          4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVA   83 (257)
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5999999999999999999999999999999865432211   12367889999999999877665       4899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ++|....      +.+++.+.+++|+.++.++++++.+..   ..++||++||....... +              ...|
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~--------------~~~y  148 (257)
T PRK07074         84 NAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G--------------HPAY  148 (257)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C--------------Cccc
Confidence            9986432      112345568899999999999886532   24589999997544211 1              1249


Q ss_pred             HHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCc----hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT----TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       143 ~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      +.+|.+.+.+++.    +.++|+++++++||+++++....    ...+....  ....+..++..++|+..++.++
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~~~~~l  222 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL--KKWYPLQDFATPDDVANAVLFL  222 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH--HhcCCCCCCCCHHHHHHHHHHH
Confidence            9999966655554    44568999999999999986422    11111111  1122345667777777666554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.88  E-value=5.8e-22  Score=158.45  Aligned_cols=194  Identities=22%  Similarity=0.245  Sum_probs=134.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|+++.|+ +++.+..     ....++.++.+|++|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            368999999999999999999999999999883 2221111     011367889999999988766553       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+||....      +.+++.+.+++|+.++..+++.+.+.+   ..+++|++||..+..+..+              
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------  146 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG--------------  146 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------
Confidence            99999986421      223566778999999999888876543   2458999999755433221              


Q ss_pred             cCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...    +.+++++...|++++.++||.+.+|..... ..+.....  ...+..+...+++++..+.|+
T Consensus       147 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~l  221 (242)
T TIGR01829       147 QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIV--AQIPVGRLGRPEEIAAAVAFL  221 (242)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHH--hcCCCCCCcCHHHHHHHHHHH
Confidence            23499999944    455555556799999999999999864332 22222211  122344566777777776554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.88  E-value=2.8e-21  Score=157.12  Aligned_cols=194  Identities=20%  Similarity=0.218  Sum_probs=129.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----CCC--CCCeEEEEccCCChhhH----Hhh-------c
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LPS--EGALELVYGDVTDYRSL----VDA-------C   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~~--~~~~~~~~~D~~~~~~~----~~~-------~   63 (229)
                      .++||||+|+||++++++|+++|++|+++.|+. ++.+.    +..  ...+.++.+|++|.+++    .++       +
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            589999999999999999999999999987643 22211    111  12466789999998754    222       2


Q ss_pred             CCccEEEEeCcccCC------CCC-----------CchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccce
Q 027007           64 FGCHVIFHTAALVEP------WLP-----------DPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFF  117 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~------~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~  117 (229)
                      ..+|+||||||....      ...           ++.+.+++|+.+++.+++++.+.+.         ..++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            358999999986311      111           2557799999999999998876541         13688888765


Q ss_pred             eeecCCCcccCCCCccccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccce
Q 027007          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDL  193 (229)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~  193 (229)
                      ...+.+.              ...|+.+|...+.++    .++.++|++++.|+||++.+|..... . ...........
T Consensus       163 ~~~~~~~--------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~-~~~~~~~~~~~  226 (267)
T TIGR02685       163 TDQPLLG--------------FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-E-VQEDYRRKVPL  226 (267)
T ss_pred             ccCCCcc--------------cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-h-HHHHHHHhCCC
Confidence            5432211              245999999665555    44556799999999999987743221 1 11111122221


Q ss_pred             eeeehhhHhhhhhhHHHH
Q 027007          194 VKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       194 ~~~~~~~~~~~~~~~~l~  211 (229)
                      ..+...+++++.++.|+-
T Consensus       227 ~~~~~~~~~va~~~~~l~  244 (267)
T TIGR02685       227 GQREASAEQIADVVIFLV  244 (267)
T ss_pred             CcCCCCHHHHHHHHHHHh
Confidence            235678888887776643

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.8e-21  Score=157.37  Aligned_cols=162  Identities=17%  Similarity=0.148  Sum_probs=121.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      |++|||||+|+||++++++|+++|++|+++.+.. +..+.+     .....++++++|++|.+++.++++       ++|
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD   89 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPIT   89 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999998887643 222111     012357889999999998877654       479


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+.   .+++|+++|...+.+.+.              
T Consensus        90 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~--------------  155 (258)
T PRK09134         90 LLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD--------------  155 (258)
T ss_pred             EEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC--------------
Confidence            99999986322      2235677899999999999999887542   348898887655433221              


Q ss_pred             cCcHHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|...+.+++.++..   ++++++++||.++++..
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~  196 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGR  196 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcc
Confidence            235999999888777776532   49999999999987653

>PRK05599 hypothetical protein; Provisional

Probab=99.88  E-value=4.5e-22  Score=160.00  Aligned_cols=160  Identities=16%  Similarity=0.192  Sum_probs=119.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCC--CCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSE--GALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      |+++||||+++||++++++|+ +|++|++++|+.++.+++    ...  ..+.++++|++|++++.++++       ++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            789999999999999999998 599999999987654332    111  246789999999998866543       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ++|||||....      ...++.+.+++|+.+..++++.+.+.+    ..++||++||..+..+.+.             
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-------------  146 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-------------  146 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-------------
Confidence            99999997422      112234567889999988887775543    1358999999876543322             


Q ss_pred             ccCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          138 FCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       138 ~~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                       ...|+.+|..    ++.++.++.++|++++++.||.+.++.
T Consensus       147 -~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~  187 (246)
T PRK05599        147 -NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSM  187 (246)
T ss_pred             -CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchh
Confidence             2349999984    555566666679999999999998875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=9.9e-22  Score=156.75  Aligned_cols=160  Identities=16%  Similarity=0.172  Sum_probs=127.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      .||||||++++|++++.+++++|.++++.|.+.+...+    ....+.++.+.||++|++++.+..+       ++|++|
T Consensus        40 ~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILV  119 (300)
T KOG1201|consen   40 IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILV  119 (300)
T ss_pred             EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEE
Confidence            58999999999999999999999999999998764333    1222368899999999999866543       589999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||+...      +.+..++.+++|+.+.+..++++.+.|   +.++||.++|++++-+.++-              ..
T Consensus       120 NNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl--------------~~  185 (300)
T KOG1201|consen  120 NNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL--------------AD  185 (300)
T ss_pred             eccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc--------------hh
Confidence            99998422      334567889999999999999999875   34699999999988766543              34


Q ss_pred             HHHHHH----HHHHHHHHHH---hcCCCeEEEecCceecCC
Q 027007          142 YERSKA----VADKIALQAA---SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~----~~e~~~~~~~---~~gi~~~~irpg~i~g~~  175 (229)
                      |+.||.    +.|.+..|+.   .+|++++.+.|+.+-+.+
T Consensus       186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm  226 (300)
T KOG1201|consen  186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM  226 (300)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc
Confidence            999998    5566666664   347999999999887654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=3.4e-21  Score=154.29  Aligned_cols=194  Identities=24%  Similarity=0.242  Sum_probs=133.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++++||||+|+||+++++.|+++|++|+++.|+..+ .+.    +. ....+.++.+|+++.+++.++++       ++|
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   85 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD   85 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999888886542 111    11 12367888999999998877654       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+|+....      ..+++++.+++|+.++.++++++.+..   ..+++|++||.....+.+.              
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~--------------  151 (248)
T PRK05557         86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG--------------  151 (248)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC--------------
Confidence            99999986322      123456778999999999999998753   2358999999754433221              


Q ss_pred             cCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|.+.+.+++.+    .+.++++++++||.+.++...... .+.....  ..........+++++.++.++
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l  226 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAIL--AQIPLGRLGQPEEIASAVAFL  226 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHH--hcCCCCCCcCHHHHHHHHHHH
Confidence            245999999777666554    355899999999999877543221 1221111  112234455666666665443

>PRK07069 short chain dehydrogenase; Validated

Probab=99.87  E-value=9.9e-22  Score=158.01  Aligned_cols=194  Identities=20%  Similarity=0.173  Sum_probs=131.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCCCCCC----C---CCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP----S---EGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~----~---~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      +++||||+|+||+++++.|+++|++|++++|+ .++.+.+.    .   ...+..+++|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999999997 43322111    1   1134567899999998866653       57


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |+|||+||....      +.+++++.+++|+.++..+++.+.+.+   +.++||++||..++.+....            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~------------  148 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY------------  148 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC------------
Confidence            999999987432      223466789999996666666555442   24699999998877654322            


Q ss_pred             ccCcHHHHHHHHHHHHHHH----Hhc--CCCeEEEecCceecCCCCchhH-----HHHHHhhcccceeeeehhhHhhhhh
Q 027007          138 FCTQYERSKAVADKIALQA----ASE--GLPIVPVYPGVIYGPGKLTTGN-----LVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~--gi~~~~irpg~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                        ..|+.+|...+.+++.+    .++  +++++.++||.+.+|.......     ....... ...+..+...+++++..
T Consensus       149 --~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~  225 (251)
T PRK07069        149 --TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA-RGVPLGRLGEPDDVAHA  225 (251)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHh-ccCCCCCCcCHHHHHHH
Confidence              34999999666665544    334  4899999999999986421100     0001111 11223456677777766


Q ss_pred             hHHH
Q 027007          207 CKFL  210 (229)
Q Consensus       207 ~~~l  210 (229)
                      +.|+
T Consensus       226 ~~~l  229 (251)
T PRK07069        226 VLYL  229 (251)
T ss_pred             HHHH
Confidence            6554

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=160.80  Aligned_cols=175  Identities=19%  Similarity=0.091  Sum_probs=122.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC---CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.    +.   ....++++++|++|.+++.++++       ++|
T Consensus        18 ~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   97 (306)
T PRK06197         18 VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRID   97 (306)
T ss_pred             EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCC
Confidence            69999999999999999999999999999997543221    11   12357889999999998877654       589


Q ss_pred             EEEEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           68 VIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        68 ~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      +||||||....    +.++++..+++|+.++..+++.+.+.+   ..++||++||...+...... .++.....+..+..
T Consensus        98 ~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~-~~~~~~~~~~~~~~  176 (306)
T PRK06197         98 LLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH-FDDLQWERRYNRVA  176 (306)
T ss_pred             EEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC-ccccCcccCCCcHH
Confidence            99999996322    234667889999999888877776643   23599999998654311111 11111001111235


Q ss_pred             cHHHHHHHHHHHHHH----HHhcCCCeEEE--ecCceecCCCC
Q 027007          141 QYERSKAVADKIALQ----AASEGLPIVPV--YPGVIYGPGKL  177 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~gi~~~~i--rpg~i~g~~~~  177 (229)
                      .|+.||++.+.+.+.    +..+|++++++  +||.+.++...
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence            699999866655554    44567777665  69999998653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.5e-22  Score=157.65  Aligned_cols=190  Identities=19%  Similarity=0.149  Sum_probs=136.1

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcCC---ccEEEEeCccc
Q 027007            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (229)
Q Consensus         4 lItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~a~~~   76 (229)
                      |||||+|+||++++++|+++|++|++++|+.++.+..    ....+++++.+|++|.+++.++++.   +|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            6999999999999999999999999999985443221    1123678899999999999888764   79999999863


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      ..      +.+++++.+++|+.++.+++++.... ..++||++||..++.+.+.              .+.|+.+|.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~--------------~~~Y~~sK~a~~  145 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSAS--------------GVLQGAINAALE  145 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCc--------------chHHHHHHHHHH
Confidence            21      22457788999999999999944332 3469999999987754322              245999999888


Q ss_pred             HHHHHHHhc--CCCeEEEecCceecCCCCch-----hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          151 KIALQAASE--GLPIVPVYPGVIYGPGKLTT-----GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       151 ~~~~~~~~~--gi~~~~irpg~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .+++.++.+  ++++++++||.+.+|.....     ...... .... .+..+...++|++.+..|+
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~dva~~~~~l  210 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAA-AAER-LPARRVGQPEDVANAILFL  210 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHH-HHhc-CCCCCCcCHHHHHHHHHHH
Confidence            887776532  58999999999988753211     111111 1111 1234556777777666554

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=9.3e-22  Score=157.64  Aligned_cols=161  Identities=22%  Similarity=0.214  Sum_probs=122.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++ +|++++.+.+.     ....+.++.+|++|++++.++++       ++|+
T Consensus         7 ~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (247)
T PRK05565          7 VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDI   86 (247)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999998 88765432211     11357889999999998877665       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||++|....      +.+++++.+++|+.++.++++.+.+..   ..+++|++||...+.+...              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~  152 (247)
T PRK05565         87 LVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC--------------E  152 (247)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC--------------c
Confidence            9999997421      223466789999999999999887643   2357999999766543221              1


Q ss_pred             CcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|...    +.++.++...|+++++++||.+.++..
T Consensus       153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~  193 (247)
T PRK05565        153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMW  193 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccc
Confidence            3499999754    445555556699999999999988754

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.7e-22  Score=163.72  Aligned_cols=172  Identities=20%  Similarity=0.112  Sum_probs=127.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----C---CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L---PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~---~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+++||++++++|+++|++|++++|+.++.++    +   .....++++++|++|.+++.++++       ++|
T Consensus        16 ~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD   95 (313)
T PRK05854         16 RAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIH   95 (313)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence            68999999999999999999999999999998654322    1   112357889999999999877654       489


Q ss_pred             EEEEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCC-CcccCCCCcccccccc
Q 027007           68 VIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTD-GYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~  139 (229)
                      +||||||....     +.++++..+++|+.+++.+++.+.+.+.  .++||++||...+.+.. ....++...   ....
T Consensus        96 ~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~---~~~~  172 (313)
T PRK05854         96 LLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERS---YAGM  172 (313)
T ss_pred             EEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccccc---Ccch
Confidence            99999997422     3356778899999999999999876532  35999999986543221 111111111   1223


Q ss_pred             CcHHHHHHHHHHHHHHHHh------cCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~------~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.||.+...++++++.      +|+++++++||.+.++..
T Consensus       173 ~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            5699999977777776642      479999999999988753

>PRK06484 short chain dehydrogenase; Validated

Probab=99.87  E-value=6.2e-22  Score=175.25  Aligned_cols=194  Identities=21%  Similarity=0.209  Sum_probs=138.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+++||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|++++.++++       ++|+||||
T Consensus         7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~n   86 (520)
T PRK06484          7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNN   86 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999999999998765433221  1256779999999998877654       48999999


Q ss_pred             CcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCc-eEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           73 AALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVE-KIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        73 a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||...        .+.+++++.+++|+.++..+++++.+.+   +.+ +||++||..+..+.++              ..
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~--------------~~  152 (520)
T PRK06484         87 AGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK--------------RT  152 (520)
T ss_pred             CCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC--------------Cc
Confidence            98621        1224577889999999999999998764   223 8999999876654332              24


Q ss_pred             cHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .|+.+|+..+.    +++++.++|++++.|+||.+.+|......   .......... .+..+...+++++....|+
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~v~~l  228 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR-IPLGRLGRPEEIAEAVFFL  228 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            59999995555    45556667999999999999888632110   0101111111 1234566777777665554

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.4e-22  Score=156.78  Aligned_cols=159  Identities=22%  Similarity=0.225  Sum_probs=122.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++..+    +.. ..++.+.+|++|.+++.++++       ++|+||
T Consensus         9 ~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   87 (239)
T PRK12828          9 VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQFGRLDALV   87 (239)
T ss_pred             EEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEE
Confidence            79999999999999999999999999999997654221    111 256778899999998876654       589999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |+++....      ..+++.+.+++|+.++.++++++.+..   ..+++|++||..++.+.+.              ...
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  153 (239)
T PRK12828         88 NIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG--------------MGA  153 (239)
T ss_pred             ECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC--------------cch
Confidence            99986321      123455678899999999999886532   3569999999887754321              245


Q ss_pred             HHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      |+.+|...+.+++.+    .+++++++.++||.++++.
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            999998666655544    3468999999999999985

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.87  E-value=7.8e-22  Score=164.34  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=119.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEccCCC--hhhH---HhhcCC--cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTD--YRSL---VDACFG--CH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~--~~~~---~~~~~~--~d   67 (229)
                      .++||||+|+||++++++|+++|++|++++|++++.+++..       ...+..+.+|+++  .+.+   .+.+.+  +|
T Consensus        55 ~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~did  134 (320)
T PLN02780         55 WALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVG  134 (320)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Confidence            58999999999999999999999999999998765443211       1256778899985  2333   333333  56


Q ss_pred             EEEEeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           68 VIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        68 ~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ++|||||....        +.+++++.+++|+.++..+++++.+.+   +.++||++||..++.....+           
T Consensus       135 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p-----------  203 (320)
T PLN02780        135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDP-----------  203 (320)
T ss_pred             EEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCc-----------
Confidence            99999997421        123456789999999999999998754   24599999998765311000           


Q ss_pred             cccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          137 YFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       137 ~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ..+.|+.||++.    +.+..++.++|+++++++||.+.++..
T Consensus       204 -~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~  246 (320)
T PLN02780        204 -LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA  246 (320)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcc
Confidence             125699999955    455556667799999999999999853

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7e-22  Score=159.04  Aligned_cols=160  Identities=21%  Similarity=0.220  Sum_probs=120.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCCCC--CCCeEEEEccCCChhhHHhhcCCc-----------c
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDACFGC-----------H   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-----------d   67 (229)
                      +++||||+|+||++++++|+++|++|++++|++ +..+.+..  ...++++++|++|.+++.++++++           +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK06924          3 YVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSI   82 (251)
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCce
Confidence            599999999999999999999999999999976 22222211  136788999999999987776531           2


Q ss_pred             EEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ++||+||....       +.+++.+.+++|+.++..+++.+.+.+.    .++||++||..+..+.+.            
T Consensus        83 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  150 (251)
T PRK06924         83 HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG------------  150 (251)
T ss_pred             EEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC------------
Confidence            78999986321       2234667799999999999888876531    348999999765433221            


Q ss_pred             cccCcHHHHHHHHHHHHHHHH------hcCCCeEEEecCceecCC
Q 027007          137 YFCTQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~------~~gi~~~~irpg~i~g~~  175 (229)
                        ...|+.+|+..+.+++.++      +.+++++.|+||.+.++.
T Consensus       151 --~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        151 --WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             --cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence              2459999997777766554      237999999999998875

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=3.2e-21  Score=155.75  Aligned_cols=191  Identities=18%  Similarity=0.131  Sum_probs=133.4

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCC---------C------CCC-CCCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---------S------GLP-SEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~---------~------~~~-~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++|||||+|  +||++++++|+++|++|++++|++...         +      .+. ....++++++|+++.+++.+++
T Consensus         7 ~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   86 (256)
T PRK12748          7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVF   86 (256)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            599999995  799999999999999999999872110         0      000 0125788999999999876655


Q ss_pred             C-------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCccc
Q 027007           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIA  127 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~  127 (229)
                      +       .+|+|||+||....      +.+++++.+++|+.++.++++++.+.+   ..+++|++||..++.+..+   
T Consensus        87 ~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  163 (256)
T PRK12748         87 YAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD---  163 (256)
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC---
Confidence            3       47999999986321      123456779999999999999987653   2358999999876654322   


Q ss_pred             CCCCccccccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhh
Q 027007          128 DENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       128 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                                 ...|+.+|.+.+.+++.    +..+|++++.++||.+.++....  .. ....... .+..+...++++
T Consensus       164 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~-~~~~~~~-~~~~~~~~~~~~  228 (256)
T PRK12748        164 -----------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--EL-KHHLVPK-FPQGRVGEPVDA  228 (256)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hH-HHhhhcc-CCCCCCcCHHHH
Confidence                       23599999977776554    44568999999999998885321  11 1111111 122345667777


Q ss_pred             hhhhHHH
Q 027007          204 RHSCKFL  210 (229)
Q Consensus       204 ~~~~~~l  210 (229)
                      +..+.|+
T Consensus       229 a~~~~~l  235 (256)
T PRK12748        229 ARLIAFL  235 (256)
T ss_pred             HHHHHHH
Confidence            7766543

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=3.4e-21  Score=155.76  Aligned_cols=191  Identities=17%  Similarity=0.125  Sum_probs=133.1

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCC-C----------C----CCCCC-CCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS-D----------I----SGLPS-EGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~-~----------~----~~~~~-~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      +++||||+|  +||++++++|+++|++|++++|... +          .    +++.. ...+.++++|++|.+++.+++
T Consensus         8 ~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~   87 (256)
T PRK12859          8 VAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELL   87 (256)
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            699999995  8999999999999999998864311 0          0    00111 135778899999999887766


Q ss_pred             C-------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCccc
Q 027007           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIA  127 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~  127 (229)
                      +       ++|+|||+|+....      +.+++++.+++|+.++..+.+++.+.+.   .++||++||..+..+.++   
T Consensus        88 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  164 (256)
T PRK12859         88 NKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG---  164 (256)
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC---
Confidence            4       47999999986321      2235667899999999999888776542   349999999876533221   


Q ss_pred             CCCCccccccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhh
Q 027007          128 DENQVHEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       128 ~~~~~~~~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                                 ...|+.+|...+.+    ++++.++|++++.|+||.+.++...  .. ....... ..+..+...++|+
T Consensus       165 -----------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~-~~~~~~~-~~~~~~~~~~~d~  229 (256)
T PRK12859        165 -----------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EE-IKQGLLP-MFPFGRIGEPKDA  229 (256)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HH-HHHHHHh-cCCCCCCcCHHHH
Confidence                       24599999966555    4555567999999999999887531  11 1111111 2223456778888


Q ss_pred             hhhhHHH
Q 027007          204 RHSCKFL  210 (229)
Q Consensus       204 ~~~~~~l  210 (229)
                      +.++.|+
T Consensus       230 a~~~~~l  236 (256)
T PRK12859        230 ARLIKFL  236 (256)
T ss_pred             HHHHHHH
Confidence            8777665

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-21  Score=157.18  Aligned_cols=162  Identities=20%  Similarity=0.204  Sum_probs=122.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+       .....++++++|++|.+++.++++       ++|
T Consensus         4 ~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (248)
T PRK08251          4 KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLD   83 (248)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999999999999999999999999999986543321       112367889999999998866554       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||+||....      ..+.+.+.+++|+.++.++++++.+.+   +.++||++||..+..+.+.             +
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------~  150 (248)
T PRK08251         84 RVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG-------------V  150 (248)
T ss_pred             EEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-------------C
Confidence            99999997432      122345679999999999999886542   3468999999765543221             1


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|...+.+++.+.    ..++++++++||++.++..
T Consensus       151 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~  192 (248)
T PRK08251        151 KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN  192 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh
Confidence            2459999997766665543    4589999999999988753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.1e-21  Score=162.69  Aligned_cols=155  Identities=19%  Similarity=0.191  Sum_probs=117.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CC-CCCCeEEEEccCCChhhHHhhcC------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~------~~d~v   69 (229)
                      +++||||+|+||++++++|+++|++|++.++... ..+.    +. ....+.++++|++|.+++.++++      ++|+|
T Consensus        14 ~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         14 VAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999987532 2111    11 12357789999999988877654      58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----------CceEEEEccceeeecCCCcccCCCCcc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----------VEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+++.          .++||++||..++.+..+         
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  164 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG---------  164 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC---------
Confidence            999997432      2346778899999999999998865431          148999999876544322         


Q ss_pred             ccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCc
Q 027007          134 EEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGV  170 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~  170 (229)
                           ...|+.+|...+.+.    +++.++|+++++|+||.
T Consensus       165 -----~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        165 -----QANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence                 234999999666655    44556799999999984

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-21  Score=157.64  Aligned_cols=161  Identities=20%  Similarity=0.194  Sum_probs=124.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++||||+|+||++++++|+++|++ |++++|+.++.+.    + .....+.++.+|+++++++.++++       ++|+
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (260)
T PRK06198          8 VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDA   87 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6899999999999999999999999 9999997643321    1 111356778999999998877654       5899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||+++...      .+.+++++.+++|+.++.++++++.+.+.    .+++|++||..++++.+.              
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------  153 (260)
T PRK06198         88 LVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF--------------  153 (260)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC--------------
Confidence            999998632      12234567799999999999999876531    358999999887754322              


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|+.+|...+.+++.++    ..+++++.++||+++++..
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            2459999997777766543    4589999999999999864

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.7e-22  Score=156.83  Aligned_cols=161  Identities=20%  Similarity=0.180  Sum_probs=122.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+    ....+++++++|++|.+++.++++       ++|+||
T Consensus         8 ~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   87 (237)
T PRK07326          8 VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLI   87 (237)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            699999999999999999999999999999986543221    111367889999999998876664       689999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |+++....      +.+++++.+++|+.++.++++++.+.+  ..+++|++||..++.+...              ...|
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~y  153 (237)
T PRK07326         88 ANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG--------------GAAY  153 (237)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC--------------CchH
Confidence            99986321      223456779999999999999987653  2358999999765543221              2349


Q ss_pred             HHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCC
Q 027007          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       143 ~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.+|+..+.+.+.    +...|+++++++||.+.++..
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence            9999866555554    445699999999999988753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.2e-21  Score=156.04  Aligned_cols=161  Identities=15%  Similarity=0.134  Sum_probs=121.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++..|+.. ....    +.. ...+.++.+|+++++++.++++       ++|+
T Consensus         8 ~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077          8 VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999988776431 1111    111 1246688999999998866654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||+||....      ..+.+++.+++|+.++.++++++.+... .+++|++||..++.+..+              ...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  153 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG--------------LSI  153 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC--------------chH
Confidence            9999996321      1123457799999999999999987642 258999999887754322              245


Q ss_pred             HHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCC
Q 027007          142 YERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~  176 (229)
                      |+.+|...+.+++.++++   +++++.++||.+.++..
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~  191 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLG  191 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence            999999777777665532   79999999999998853

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.86  E-value=1.8e-20  Score=149.46  Aligned_cols=188  Identities=15%  Similarity=0.061  Sum_probs=128.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh---cCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA---CFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~~~~d~vi~~a~~   75 (229)
                      |+++||||+|+||++++++|+++|  ..|+...|+...  .. ....++++++|++|.+++.++   ++++|+||||||.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DF-QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--cc-ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            899999999999999999999985  566666665432  11 123678899999999887664   4468999999997


Q ss_pred             cCC------------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           76 VEP------------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        76 ~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ...            ..+.+.+.+++|+.++..+++.+.+.+.   .++++++||..+.....     .  .    ....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~-----~--~----~~~~  146 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN-----R--L----GGWY  146 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC-----C--C----CCcc
Confidence            421            0123556799999999999999988652   24889998753211100     0  0    0124


Q ss_pred             cHHHHHHHHHHHHHH----HHh--cCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADKIALQ----AAS--EGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~--~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|...+.+.+.    +.+  .+++++.+.||.+.++......        . ..+..+...+++++..+.++-
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~-~~~~~~~~~~~~~a~~~~~l~  214 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ--------Q-NVPKGKLFTPEYVAQCLLGII  214 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--------h-ccccCCCCCHHHHHHHHHHHH
Confidence            599999966555544    443  4899999999999998742210        1 112234557777776655543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.86  E-value=6.9e-21  Score=153.55  Aligned_cols=167  Identities=25%  Similarity=0.341  Sum_probs=118.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-CCCCeEEEEccCCC-hhhHHhhc-CCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTD-YRSLVDAC-FGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~-~~~d~vi~~a~~~~   77 (229)
                      |+||||||+|+||++++++|+++|++|+++.|++++..... ...+++++++|++| .+++.+.+ .++|+||++++...
T Consensus        18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~   97 (251)
T PLN00141         18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRR   97 (251)
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCc
Confidence            68999999999999999999999999999999876543221 12368899999998 46777777 68999999988632


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      ..  +....+++|..++.++++++.+.+ .++||++||..+|+...+.+.+..... . .....|..+|..+|.+++   
T Consensus        98 ~~--~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~k~~~e~~l~---  169 (251)
T PLN00141         98 SF--DPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIF-L-NLFGLTLVAKLQAEKYIR---  169 (251)
T ss_pred             CC--CCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhH-H-HHHHHHHHHHHHHHHHHH---
Confidence            11  223346789999999999998764 679999999988875322211110000 0 000112234555555443   


Q ss_pred             hcCCCeEEEecCceecCC
Q 027007          158 SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~  175 (229)
                      ..|++++++|||+++++.
T Consensus       170 ~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        170 KSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             hcCCcEEEEECCCccCCC
Confidence            358999999999999874

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.86  E-value=5e-23  Score=165.00  Aligned_cols=190  Identities=25%  Similarity=0.263  Sum_probs=139.9

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEEcCCCCC----CCCCCCCCeEEEEccCCChhhHHhhc--------CCccEEEEe
Q 027007            7 GAS--GYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFHT   72 (229)
Q Consensus         7 Gg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~~d~vi~~   72 (229)
                      |++  ++||++++++|+++|++|++++|+.++.    +++.......++++|+++.+++.+++        .++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999987642    22221123456999999999887663        468999999


Q ss_pred             CcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           73 AALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        73 a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ++....          +.++|+..+++|+.++..+++++.+.+. .+++|++||.......+..              ..
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~--------------~~  146 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY--------------SA  146 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT--------------HH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc--------------hh
Confidence            987432          1135778899999999999999987642 2489999998655443322              35


Q ss_pred             HHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          142 YERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |+.+|+    +++.++.++++ +|||+|+|+||.+.++......   .+..  ......++++++.++|++.++.||-.
T Consensus       147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~--~~~~~~pl~r~~~~~evA~~v~fL~s  223 (241)
T PF13561_consen  147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLE--ELKKRIPLGRLGTPEEVANAVLFLAS  223 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHH--HHHHHSTTSSHBEHHHHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhh--hhhhhhccCCCcCHHHHHHHHHHHhC
Confidence            999998    55666777888 9999999999999988532111   1111  12233456788899999999888754

...

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-21  Score=158.44  Aligned_cols=160  Identities=21%  Similarity=0.241  Sum_probs=121.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~   71 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    .....+.++++|++|.+++.++++      .+|+|||
T Consensus         7 ~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~   86 (263)
T PRK09072          7 RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLIN   86 (263)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            589999999999999999999999999999986543222    112367889999999998766543      5899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      +||....      +.+++++.+++|+.++.++++.+.+.+   ..+++|++||..+..+..+              ...|
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y  152 (263)
T PRK09072         87 NAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG--------------YASY  152 (263)
T ss_pred             CCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC--------------ccHH
Confidence            9987422      123456788999999999999987643   2358999998765433222              2449


Q ss_pred             HHHHHHHHH----HHHHHHhcCCCeEEEecCceecCC
Q 027007          143 ERSKAVADK----IALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       143 ~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      +.+|...+.    ++.++.++|++++++.||.+.++.
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~  189 (263)
T PRK09072        153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM  189 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence            999996554    445555678999999999998875

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.86  E-value=3.8e-21  Score=153.37  Aligned_cols=193  Identities=23%  Similarity=0.190  Sum_probs=132.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +||||++|+||++++++|+++|++|++++|+.. ..+.    +.. ...++++.+|++|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999998752 2111    111 1247789999999998877664       47999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||++|....      +.+++++.+++|+.++.++++.+.+..   ..+++|++||..++.+.+.              ..
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~--------------~~  146 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG--------------QA  146 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC--------------Cc
Confidence            999997422      224567789999999999999987642   2459999999765433221              24


Q ss_pred             cHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .|+.+|.+.+.+.+.+    ...|+++++++||.+.++................ .+....+.+++++..+.++
T Consensus       147 ~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~  219 (239)
T TIGR01830       147 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQ-IPLGRFGTPEEVANAVAFL  219 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhc-CCcCCCcCHHHHHHHHHHH
Confidence            5999999666555444    4468999999999998875322222222222222 2234455666666555433

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05865 hypothetical protein; Provisional

Probab=99.86  E-value=1.6e-20  Score=171.37  Aligned_cols=132  Identities=33%  Similarity=0.478  Sum_probs=112.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |||+||||+||||++++++|+++|++|++++|+....  ..  ..++++.+|++|.+++.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~~--~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--WP--SSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--cc--cCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            8999999999999999999999999999999974321  11  25788999999999999999999999999975321  


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                           .+++|+.++.++++++.+.+ .++||++||..                            |..+|.++..   ++
T Consensus        75 -----~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------K~aaE~ll~~---~g  117 (854)
T PRK05865         75 -----NDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------QPRVEQMLAD---CG  117 (854)
T ss_pred             -----hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------HHHHHHHHHH---cC
Confidence                 57899999999999998875 67999999842                            6777777643   58


Q ss_pred             CCeEEEecCceecCC
Q 027007          161 LPIVPVYPGVIYGPG  175 (229)
Q Consensus       161 i~~~~irpg~i~g~~  175 (229)
                      ++++++||+++|||+
T Consensus       118 l~~vILRp~~VYGP~  132 (854)
T PRK05865        118 LEWVAVRCALIFGRN  132 (854)
T ss_pred             CCEEEEEeceEeCCC
Confidence            999999999999996

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.86  E-value=3.6e-21  Score=174.40  Aligned_cols=195  Identities=18%  Similarity=0.219  Sum_probs=137.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+..+...       ....+..+++|++|.+++.++++       ++|
T Consensus       416 vvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iD  495 (676)
T TIGR02632       416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVD  495 (676)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            6899999999999999999999999999999865432211       11246788999999999877765       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....      ..++|+..+++|+.+++.+++.+.+.+    ..++||++||..+..+.++             
T Consensus       496 ilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~-------------  562 (676)
T TIGR02632       496 IVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN-------------  562 (676)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC-------------
Confidence            99999997321      123567789999999999887776542    1348999999765543322             


Q ss_pred             ccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHH-----------H--HHhhcccceeeeehhh
Q 027007          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-----------A--KLQWKKVDLVKDIFLL  200 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~  200 (229)
                       ...|+.+|++.+.+++.++    ++|+++++|+||.++.+.......+.           .  ..........++...+
T Consensus       563 -~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~p  641 (676)
T TIGR02632       563 -ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFP  641 (676)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCH
Confidence             2459999997777766554    45899999999999743111100000           0  0111222344566778


Q ss_pred             HhhhhhhHHH
Q 027007          201 ERMRHSCKFL  210 (229)
Q Consensus       201 ~~~~~~~~~l  210 (229)
                      +|++.++.|+
T Consensus       642 eDVA~av~~L  651 (676)
T TIGR02632       642 ADIAEAVFFL  651 (676)
T ss_pred             HHHHHHHHHH
Confidence            8888887776

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=3.5e-21  Score=167.62  Aligned_cols=194  Identities=19%  Similarity=0.199  Sum_probs=138.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||+++++.|+++|++|++++|+...  .+.+....+...+.+|++|.+++.++++       ++|+||||
T Consensus       212 ~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~  291 (450)
T PRK08261        212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHN  291 (450)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            68999999999999999999999999999885321  1111111134678899999998876654       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++++..+++|+.++.++.+++.+.+   ..++||++||..++.+..+              ...|+
T Consensus       292 AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~--------------~~~Y~  357 (450)
T PRK08261        292 AGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG--------------QTNYA  357 (450)
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--------------ChHHH
Confidence            997432      234577889999999999999998742   2258999999876543322              24599


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .+|.    +.+.++.++.++|+++++++||.+-++......... .........+.+.+.++|++.+..|+
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~-~~~~~~~~~l~~~~~p~dva~~~~~l  427 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFAT-REAGRRMNSLQQGGLPVDVAETIAWL  427 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhH-HHHHhhcCCcCCCCCHHHHHHHHHHH
Confidence            9999    556666666677999999999999876532211111 11122233345567788888887776

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-21  Score=152.99  Aligned_cols=158  Identities=15%  Similarity=0.039  Sum_probs=119.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEccCCChhhHHhhc-------C-CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDAC-------F-GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~-------~-~~d~   68 (229)
                      +++||||+++||++++++|+++|++|++++|+.++.+++.    . ...+..+++|++|++++.+++       . ++|+
T Consensus         7 ~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~   86 (227)
T PRK08862          7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDV   86 (227)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCE
Confidence            6899999999999999999999999999999876543321    1 135677889999999887654       3 6899


Q ss_pred             EEEeCcccC---C----CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||||...   +    +.+++.+.+++|+.++..+++.+.+++    ..++||++||..++.   .             
T Consensus        87 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~-------------  150 (227)
T PRK08862         87 LVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---D-------------  150 (227)
T ss_pred             EEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---C-------------
Confidence            999997421   1    112455678889999999888876643    135899999864321   0             


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ...|+.+|+    +++.++.++.++|++++.|.||++.++..
T Consensus       151 -~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~  192 (227)
T PRK08862        151 -LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGE  192 (227)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCc
Confidence             134999999    55666677777899999999999999853

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.86  E-value=1.3e-20  Score=144.66  Aligned_cols=151  Identities=34%  Similarity=0.536  Sum_probs=121.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   82 (229)
                      |+|+||||++|+.++++|+++|++|+++.|++++.+.   ..+++++++|+.|++++.++++++|+||++++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999999876555   348999999999999999999999999999975321    


Q ss_pred             chhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcCCC
Q 027007           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (229)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~  162 (229)
                             +...+.++++++.+.+ .+++|++||...+........+....     ....|...|..+|.+.+   ..+++
T Consensus        74 -------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~---~~~~~  137 (183)
T PF13460_consen   74 -------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKP-----IFPEYARDKREAEEALR---ESGLN  137 (183)
T ss_dssp             -------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCG-----GGHHHHHHHHHHHHHHH---HSTSE
T ss_pred             -------cccccccccccccccc-cccceeeeccccCCCCCccccccccc-----chhhhHHHHHHHHHHHH---hcCCC
Confidence                   2777889999998885 78999999998877544321111111     11347778877776664   35899


Q ss_pred             eEEEecCceecCCC
Q 027007          163 IVPVYPGVIYGPGK  176 (229)
Q Consensus       163 ~~~irpg~i~g~~~  176 (229)
                      ++++||+.+|++..
T Consensus       138 ~~ivrp~~~~~~~~  151 (183)
T PF13460_consen  138 WTIVRPGWIYGNPS  151 (183)
T ss_dssp             EEEEEESEEEBTTS
T ss_pred             EEEEECcEeEeCCC
Confidence            99999999999964

...

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.3e-21  Score=150.66  Aligned_cols=160  Identities=19%  Similarity=0.185  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      |++|||||+|+||++++++|+++ ++|++++|+.++.+.+.. ...++++++|++|.+++.++++   ++|+|||++|..
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   82 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA   82 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            37999999999999999999999 999999998654332211 1257889999999999988876   589999999874


Q ss_pred             CCC------CCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           77 EPW------LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        77 ~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      ...      .+++++.+++|+.++.++.+.+.+..  ..+++|++||..++.+..+              ...|+.+|..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~--------------~~~y~~~K~a  148 (227)
T PRK08219         83 DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG--------------WGSYAASKFA  148 (227)
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC--------------CchHHHHHHH
Confidence            321      12356678999999877777665432  1358999999877654332              2349999998


Q ss_pred             HHHHHHHHHh--cC-CCeEEEecCceecCC
Q 027007          149 ADKIALQAAS--EG-LPIVPVYPGVIYGPG  175 (229)
Q Consensus       149 ~e~~~~~~~~--~g-i~~~~irpg~i~g~~  175 (229)
                      .+.+.+.++.  .+ ++++.++||.+.++.
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~  178 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPGRTDTDM  178 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecCCccchH
Confidence            8888777653  25 999999999887764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.2e-20  Score=151.65  Aligned_cols=158  Identities=16%  Similarity=0.130  Sum_probs=115.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC---
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE---   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~---   77 (229)
                      +++||||+|+||++++++|+++|++|++++|+. +..+.... .....+++|++|.+++.+.+.++|++|||||...   
T Consensus        16 ~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~   94 (245)
T PRK12367         16 RIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGINPGGR   94 (245)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCC
Confidence            689999999999999999999999999999976 22211111 1235688999999999998999999999999732   


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCC-----c-eEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH-
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTV-----E-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD-  150 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e-  150 (229)
                      .+.+++++.+++|+.++.++++++.+.+..     + .++..||.....+. .              ...|+.||+..+ 
T Consensus        95 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-~--------------~~~Y~aSKaal~~  159 (245)
T PRK12367         95 QDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-L--------------SPSYEISKRLIGQ  159 (245)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-C--------------CchhHHHHHHHHH
Confidence            223467888999999999999999876421     2 34444454332211 0              234999999653 


Q ss_pred             --HHHHHH----HhcCCCeEEEecCceecCC
Q 027007          151 --KIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       151 --~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                        .+.+++    .+.++.++.+.||.+.++.
T Consensus       160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~  190 (245)
T PRK12367        160 LVSLKKNLLDKNERKKLIIRKLILGPFRSEL  190 (245)
T ss_pred             HHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence              333433    3468999999999987764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6e-21  Score=152.64  Aligned_cols=161  Identities=18%  Similarity=0.149  Sum_probs=117.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCCh--hhHHhh-------c-CC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDY--RSLVDA-------C-FG   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~--~~~~~~-------~-~~   65 (229)
                      +++||||+|+||++++++|+++|++|++++|++++.+...      ....+.++.+|+++.  +++.++       + .+
T Consensus         8 ~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~   87 (239)
T PRK08703          8 TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGK   87 (239)
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999875433211      112456788999763  344333       2 46


Q ss_pred             ccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           66 CHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        66 ~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      +|+|||+||....       +.+++.+.+++|+.++.++++++.+.+   ..+++|++||..+..+.+.           
T Consensus        88 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----------  156 (239)
T PRK08703         88 LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY-----------  156 (239)
T ss_pred             CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC-----------
Confidence            8999999996321       123455679999999999999987653   2359999998654432211           


Q ss_pred             ccccCcHHHHHHHHHHHHHHHH----hc-CCCeEEEecCceecCCC
Q 027007          136 KYFCTQYERSKAVADKIALQAA----SE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~-gi~~~~irpg~i~g~~~  176 (229)
                         ...|+.+|+..+.+++.++    ++ ++++++++||.+++|..
T Consensus       157 ---~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~  199 (239)
T PRK08703        157 ---WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR  199 (239)
T ss_pred             ---ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence               2459999997776665544    34 69999999999999964

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-20  Score=149.77  Aligned_cols=162  Identities=20%  Similarity=0.157  Sum_probs=124.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc---C--CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---F--GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~--~~d~vi~~a~~~   76 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.. ..++++.+|+++.+++.+++   .  ++|+|||+++..
T Consensus         3 ~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953          3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             eEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            68999999999999999999999999999998665444332 24578899999999887753   2  489999999874


Q ss_pred             CC--------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceee-ecCCCcccCCCCccccccccCcHHHH
Q 027007           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ..        +.+++++.+++|+.++.++++++.+.+.  .++++++||..+. +..+...            ...|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~------------~~~Y~~s  149 (222)
T PRK06953         82 GPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT------------GWLYRAS  149 (222)
T ss_pred             cCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC------------ccccHHh
Confidence            11        2345778899999999999999987542  2479999987543 2211100            1249999


Q ss_pred             HHHHHHHHHHHHh--cCCCeEEEecCceecCCC
Q 027007          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       146 K~~~e~~~~~~~~--~gi~~~~irpg~i~g~~~  176 (229)
                      |...+.+++.++.  .+++++.++||++.++..
T Consensus       150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~  182 (222)
T PRK06953        150 KAALNDALRAASLQARHATCIALHPGWVRTDMG  182 (222)
T ss_pred             HHHHHHHHHHHhhhccCcEEEEECCCeeecCCC
Confidence            9998888887763  279999999999999863

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=7.9e-23  Score=150.17  Aligned_cols=194  Identities=22%  Similarity=0.265  Sum_probs=146.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcCC---ccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~a~~~   76 (229)
                      .|++||+.-+||++++++|++.|..|+.+.|++..+..+-.+  ..+..+.+|+++.+.+.+++..   +|.++||||+.
T Consensus         9 ~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA   88 (245)
T KOG1207|consen    9 IVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVA   88 (245)
T ss_pred             EEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccchhh
Confidence            589999999999999999999999999999998776654332  2467889999999888888764   79999999972


Q ss_pred             ------CCCCCCchhhhHhhHHHHHHHHHHHHh----cCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           77 ------EPWLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        77 ------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                            +-+++++++.|++|+.+.+++.+.+.+    ....+.||++||.+...+-.++              +.|+.+|
T Consensus        89 ~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nH--------------tvYcatK  154 (245)
T KOG1207|consen   89 TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNH--------------TVYCATK  154 (245)
T ss_pred             hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCc--------------eEEeecH
Confidence                  224567889999999999999888544    3345689999998877655444              3499999


Q ss_pred             H----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH--HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          147 A----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN--LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       147 ~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      +    +.+.++.|+++++||++.+.|..+++.+....++  ...+-+..++ ++++|.+.+++-++.-||
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~ri-Pl~rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRI-PLKRFAEVDEVVNAVLFL  223 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhC-chhhhhHHHHHHhhheee
Confidence            8    4556677888889999999999999987643322  1111122222 356777777777666554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.3e-21  Score=174.27  Aligned_cols=162  Identities=19%  Similarity=0.192  Sum_probs=126.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++||||+|+||++++++|+++|++|++++|++++.+++.     ....+.++++|++|.+++.++++       ++|+
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            36899999999999999999999999999999865433221     12367889999999999877765       5899


Q ss_pred             EEEeCcccCC-----C---CCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP-----W---LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~-----~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||....     .   .+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.             
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  518 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR-------------  518 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-------------
Confidence            9999996311     1   13466789999999999999887653   2358999999988765432             


Q ss_pred             ccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       .+.|+.+|.+.+.++    .++.++|+++++|+||.+.++..
T Consensus       519 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~  560 (657)
T PRK07201        519 -FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMI  560 (657)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccccc
Confidence             245999999655554    45556799999999999999864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.85  E-value=4.6e-21  Score=174.26  Aligned_cols=194  Identities=23%  Similarity=0.244  Sum_probs=138.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    .....+..+.+|++|.+++.++++       ++|+||
T Consensus       424 ~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI  503 (681)
T PRK08324        424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVV  503 (681)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999999999999986543221    111367889999999998877654       589999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||....      +.+++++.+++|+.++.++++++.+.+.    .++||++||..++.+.++              ..
T Consensus       504 ~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--------------~~  569 (681)
T PRK08324        504 SNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--------------FG  569 (681)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--------------cH
Confidence            99996321      2345778899999999999988875431    258999999876643322              24


Q ss_pred             cHHHHHHHHHHHHHHHH----hcCCCeEEEecCcee-cCCCCchhHHHH----------H---HhhcccceeeeehhhHh
Q 027007          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIY-GPGKLTTGNLVA----------K---LQWKKVDLVKDIFLLER  202 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~-g~~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~  202 (229)
                      .|+.+|...+.+++.++    ++|+++++++|+.+| ++.... ..+..          .   .........++...++|
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            59999997777776654    458999999999997 443111 11100          0   01122233456677888


Q ss_pred             hhhhhHHH
Q 027007          203 MRHSCKFL  210 (229)
Q Consensus       203 ~~~~~~~l  210 (229)
                      ++.++.|+
T Consensus       649 vA~a~~~l  656 (681)
T PRK08324        649 VAEAVVFL  656 (681)
T ss_pred             HHHHHHHH
Confidence            88777665

>PRK08017 oxidoreductase; Provisional

Probab=99.85  E-value=1.9e-20  Score=151.04  Aligned_cols=159  Identities=22%  Similarity=0.211  Sum_probs=120.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc--------CCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~~d~vi~~a   73 (229)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+.+.. .+++.+++|++|.+++.+++        ..+|.+||++
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            79999999999999999999999999999998765544322 24678899999988875544        2468999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.+++++.+++|+.++.++.+.+.+.+   ..+++|++||.+++.+...              .+.|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~Y~~  148 (256)
T PRK08017         83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG--------------RGAYAA  148 (256)
T ss_pred             CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC--------------ccHHHH
Confidence            86321      223466789999999999876665432   2468999999765543221              245999


Q ss_pred             HHHHHHHHHHH----HHhcCCCeEEEecCceecCC
Q 027007          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       145 sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~  175 (229)
                      +|...+.+.+.    +..+++++++++||.+.++.
T Consensus       149 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  183 (256)
T PRK08017        149 SKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF  183 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch
Confidence            99988876654    34568999999999987764

>PLN00016 RNA-binding protein; Provisional

Probab=99.84  E-value=7.8e-20  Score=155.81  Aligned_cols=151  Identities=23%  Similarity=0.360  Sum_probs=112.6

Q ss_pred             CEEEEE----cCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----------CCCCeEEEEccCCChhhHHhhcCCc
Q 027007            1 MKILVS----GASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----------SEGALELVYGDVTDYRSLVDACFGC   66 (229)
Q Consensus         1 m~vlIt----Gg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~   66 (229)
                      |+||||    |||||||++++++|+++|++|++++|+......+.          ...+++++++|++|.+++. ...++
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~~  131 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAGF  131 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCCc
Confidence            579999    99999999999999999999999999865422211          0125788999987744333 22479


Q ss_pred             cEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      |+|||+++.              +..++.++++++.+.+ .++|||+||..+|+.....+..|..+..+      +. +|
T Consensus       132 d~Vi~~~~~--------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p------~~-sK  189 (378)
T PLN00016        132 DVVYDNNGK--------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKP------KA-GH  189 (378)
T ss_pred             cEEEeCCCC--------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCC------cc-hH
Confidence            999999752              1346889999998875 78999999999998654333333333222      22 78


Q ss_pred             HHHHHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          147 AVADKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       147 ~~~e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      ..+|.++++   .+++++++||+.+|||+..
T Consensus       190 ~~~E~~l~~---~~l~~~ilRp~~vyG~~~~  217 (378)
T PLN00016        190 LEVEAYLQK---LGVNWTSFRPQYIYGPGNN  217 (378)
T ss_pred             HHHHHHHHH---cCCCeEEEeceeEECCCCC
Confidence            888887653   5899999999999999753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=1.1e-19  Score=165.25  Aligned_cols=161  Identities=17%  Similarity=0.223  Sum_probs=117.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      ||||||||+||||++|++.|.++|++|...                   .+|++|.+.+.+.+.  ++|+|||+|+....
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~  441 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVTGR  441 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------ccccccHHHHHHHHHhhCCCEEEECCcccCC
Confidence            899999999999999999999999987311                   236788888877776  68999999997532


Q ss_pred             -----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC------CcccCCCCccccccccCcHHHHHH
Q 027007           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD------GYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~------~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                           ++.++.+.+++|+.++.+|+++|++.+ . ++|++||.++|+...      ..+.+|+..+.  ++.+.|+.||.
T Consensus       442 ~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~--~~~~~Yg~sK~  517 (668)
T PLN02260        442 PNVDWCESHKVETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPN--FTGSFYSKTKA  517 (668)
T ss_pred             CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCCCC--CCCChhhHHHH
Confidence                 234677889999999999999999985 4 567778887776321      12233332221  12367999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhh
Q 027007          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQW  188 (229)
Q Consensus       148 ~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~  188 (229)
                      ++|.+++.+.    +..++|+.++|+.......+|+..++.
T Consensus       518 ~~E~~~~~~~----~~~~~r~~~~~~~~~~~~~nfv~~~~~  554 (668)
T PLN02260        518 MVEELLREYD----NVCTLRVRMPISSDLSNPRNFITKISR  554 (668)
T ss_pred             HHHHHHHhhh----hheEEEEEEecccCCCCccHHHHHHhc
Confidence            9999998864    357778888886542223456655543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=1.2e-21  Score=143.84  Aligned_cols=192  Identities=24%  Similarity=0.245  Sum_probs=156.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      .|||||.+++|++.++.|+..|..|++++-..++-.+...+  .++.|..+|++..+++..++.       +.|..+|||
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vnca   91 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCA   91 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeecc
Confidence            58999999999999999999999999999887665543322  468899999999999877764       489999999


Q ss_pred             ccc------------CCCCCCchhhhHhhHHHHHHHHHHHHhcC---------CCceEEEEccceeeecCCCcccCCCCc
Q 027007           74 ALV------------EPWLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        74 ~~~------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                      |..            ....+++++.+++|+.||+|+++.....|         ..+.||+..|.+++.+.-+.       
T Consensus        92 gia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq-------  164 (260)
T KOG1199|consen   92 GIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ-------  164 (260)
T ss_pred             ceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch-------
Confidence            962            11335788899999999999998765432         12368999999999876553       


Q ss_pred             cccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                             +.|+.||.    |.--+++.++..|||++.|.||.+-+|.-...++-+..++...++...+.++|.|+++..+
T Consensus       165 -------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvq  237 (260)
T KOG1199|consen  165 -------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQ  237 (260)
T ss_pred             -------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHH
Confidence                   44999997    7778889999899999999999999998777777788888888887788888888876543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=4.2e-20  Score=148.44  Aligned_cols=187  Identities=17%  Similarity=0.140  Sum_probs=129.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC--CCCeEEEEccCC--ChhhHHhh-------cCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVT--DYRSLVDA-------CFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~D~~--~~~~~~~~-------~~~   65 (229)
                      ++++||||+|+||.+++++|+++|++|++++|+.++.+.+    ..  ...+.++.+|++  +.+++.++       +.+
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            3799999999999999999999999999999986432221    11  125667778886  45544333       346


Q ss_pred             ccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           66 CHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        66 ~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      +|+|||+|+....       +.+++.+.+++|+.++.++++++.+.+   +.++||++||..+..+...           
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-----------  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN-----------  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC-----------
Confidence            8999999986321       223567789999999999999886532   3469999999765533221           


Q ss_pred             ccccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                         ...|+.+|...+.+++.++    ..|+++++++||.+.++.....  + .    . .. ......+++++..+.|+
T Consensus       162 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~--~-~----~-~~-~~~~~~~~~~~~~~~~~  228 (247)
T PRK08945        162 ---WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA--F-P----G-ED-PQKLKTPEDIMPLYLYL  228 (247)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh--c-C----c-cc-ccCCCCHHHHHHHHHHH
Confidence               2349999997777766544    4589999999999988743111  0 0    0 00 12356777777776664

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2.5e-20  Score=148.78  Aligned_cols=161  Identities=19%  Similarity=0.149  Sum_probs=120.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++||||+|+||+++++.|+++|++|++++|++++.+.+    .....++++++|+++++++.++++       .+|.+|
T Consensus         7 ~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii   86 (238)
T PRK05786          7 KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLV   86 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            799999999999999999999999999999987544322    112357889999999998876654       369999


Q ss_pred             EeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceee-ecCCCcccCCCCccccccccCcHHH
Q 027007           71 HTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        71 ~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |+++....    ..+++++.+++|+.++..+++.+.+... .+++|++||..+. ++.+              ....|+.
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~~Y~~  152 (238)
T PRK05786         87 VTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP--------------DQLSYAV  152 (238)
T ss_pred             EcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC--------------CchHHHH
Confidence            99985321    1134566789999999999999887642 2489999987542 1111              1245999


Q ss_pred             HHHHHHHHHHH----HHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +|...+.+++.    +..+|+++++++||+++++..
T Consensus       153 sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        153 AKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence            99966555544    445689999999999999853

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=2.7e-20  Score=140.38  Aligned_cols=159  Identities=18%  Similarity=0.195  Sum_probs=124.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-CCCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      +||||||+.+||.++++++.+.|.+|++..|++.++++.. ..+..+-..+|+.|.+++.++.+       ..+++||||
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNA   86 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNA   86 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecc
Confidence            6999999999999999999999999999999987766532 23467778999999987766553       479999999


Q ss_pred             ccc---CC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           74 ALV---EP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        74 ~~~---~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |+.   +.     ..++.++-+.+|+.++.+|...+.++.   +..-||++||.-++-+....+.              |
T Consensus        87 GIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv--------------Y  152 (245)
T COG3967          87 GIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV--------------Y  152 (245)
T ss_pred             cccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc--------------c
Confidence            972   11     122345568999999999999998773   2348999999988877665555              9


Q ss_pred             HHHHHHHHHHHHHH----HhcCCCeEEEecCceecC
Q 027007          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~  174 (229)
                      +.+|+....+...+    ...+++|+-+-|..|-++
T Consensus       153 caTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         153 CATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999555444332    234899999999999886

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.83  E-value=1.4e-20  Score=144.03  Aligned_cols=158  Identities=23%  Similarity=0.249  Sum_probs=129.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC------CCCCCCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++++|||.|+||+++..+|+.+|..+.+++.+.++      ++...+...+.|+++|+++.++++++++       .+|+
T Consensus         7 na~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDI   86 (261)
T KOG4169|consen    7 NALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDI   86 (261)
T ss_pred             eEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEE
Confidence            68999999999999999999999988888777654      2333334578899999999999988876       3799


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      +||+||+.+  +.+|++.+.+|+.|..+-...+.+++.      .+-||++||.++..+.+..+.              |
T Consensus        87 lINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV--------------Y  150 (261)
T KOG4169|consen   87 LINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV--------------Y  150 (261)
T ss_pred             EEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh--------------h
Confidence            999999865  467999999999998888888877642      236999999998887765555              9


Q ss_pred             HHHHH----HHHHHHHH--HHhcCCCeEEEecCceecCC
Q 027007          143 ERSKA----VADKIALQ--AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       143 ~~sK~----~~e~~~~~--~~~~gi~~~~irpg~i~g~~  175 (229)
                      ++||.    +..+++..  +.+.|++++.++||.+.+..
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l  189 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL  189 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence            99998    67776654  45679999999999987753

>PLN00015 protochlorophyllide reductase

Probab=99.83  E-value=4.1e-20  Score=153.36  Aligned_cols=173  Identities=18%  Similarity=0.126  Sum_probs=120.1

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            4 LVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         4 lItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +||||+++||.+++++|+++| ++|++++|+.++.+.    +. ....+.++++|++|.+++.++++       .+|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997654321    11 11357788999999998866653       479999


Q ss_pred             EeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---C--CceEEEEccceeeecCC-C--cc-cC------
Q 027007           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTD-G--YI-AD------  128 (229)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~~sS~~~~~~~~-~--~~-~~------  128 (229)
                      ||||....       +.+++++.+++|+.++..+++.+.+.+   +  .++||++||..++-+.. .  ++ .+      
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99997321       223567889999999999999987753   1  35999999987642210 0  00 00      


Q ss_pred             ------CC---Ccc--ccccccCcHHHHHHHH----HHHHHHHHh-cCCCeEEEecCcee-cCCC
Q 027007          129 ------EN---QVH--EEKYFCTQYERSKAVA----DKIALQAAS-EGLPIVPVYPGVIY-GPGK  176 (229)
Q Consensus       129 ------~~---~~~--~~~~~~~~Y~~sK~~~----e~~~~~~~~-~gi~~~~irpg~i~-g~~~  176 (229)
                            +.   .+.  ........|+.||++.    +.+++++.+ .|+++++++||++. ++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~  225 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLF  225 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccc
Confidence                  00   000  0001235699999953    445555543 58999999999994 5543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.82  E-value=4.4e-20  Score=153.58  Aligned_cols=175  Identities=18%  Similarity=0.110  Sum_probs=122.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCC----CC-CCCCeEEEEccCCChhhHHhhc-------CCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDAC-------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~-------~~~d~   68 (229)
                      +++||||+++||++++++|+++| ++|++++|+.++.++    +. ....++++.+|++|.+++.+++       .++|+
T Consensus         5 ~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   84 (314)
T TIGR01289         5 TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDA   84 (314)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            58999999999999999999999 999999997654322    11 1135778899999999886654       35899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCC----cccCCCC-
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDG----YIADENQ-  131 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~----~~~~~~~-  131 (229)
                      +|||||....       +.+++++.+++|+.++..+++.+.+.+.     .++||++||..++.....    +..+... 
T Consensus        85 lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  164 (314)
T TIGR01289        85 LVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDL  164 (314)
T ss_pred             EEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccccc
Confidence            9999997321       1235677899999999999998877531     259999999877643100    0000000 


Q ss_pred             ------c--------cccccccCcHHHHHHHHHHHHHHHH-----hcCCCeEEEecCcee-cCCC
Q 027007          132 ------V--------HEEKYFCTQYERSKAVADKIALQAA-----SEGLPIVPVYPGVIY-GPGK  176 (229)
Q Consensus       132 ------~--------~~~~~~~~~Y~~sK~~~e~~~~~~~-----~~gi~~~~irpg~i~-g~~~  176 (229)
                            +        ..+......|+.||++...++++++     +.|+++++++||.+. ++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~  229 (314)
T TIGR01289       165 SGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF  229 (314)
T ss_pred             ccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence                  0        0011223569999996555444443     248999999999995 6543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=3.2e-19  Score=146.96  Aligned_cols=196  Identities=11%  Similarity=0.104  Sum_probs=126.8

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCC-----------CCCCCC---CCCC-----CeEEEEccCCChh---
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRT-----------SDISGL---PSEG-----ALELVYGDVTDYR---   57 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~---~~~~-----~~~~~~~D~~~~~---   57 (229)
                      .++|||++  .+||++++++|+++|++|++.++.+           .+....   ....     .+..+.+|+++.+   
T Consensus        10 ~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~   89 (299)
T PRK06300         10 IAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVP   89 (299)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEee
Confidence            48999995  9999999999999999999976531           000000   0000     0111233444433   


Q ss_pred             ---------------hHHhh-------cCCccEEEEeCcccC----C----CCCCchhhhHhhHHHHHHHHHHHHhcCCC
Q 027007           58 ---------------SLVDA-------CFGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (229)
Q Consensus        58 ---------------~~~~~-------~~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (229)
                                     ++.++       +.++|++|||||...    +    +.++|++.+++|+.+++++++++.+.+..
T Consensus        90 ~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~  169 (299)
T PRK06300         90 EEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP  169 (299)
T ss_pred             cccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence                           23333       345899999997521    1    23467888999999999999999987633


Q ss_pred             -ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecCCCCchh-
Q 027007          108 -EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTG-  180 (229)
Q Consensus       108 -~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~~-  180 (229)
                       +++|++||..+..+.+..             ...|+.||.    +++.++.++++ +||++++|.||.+.++...... 
T Consensus       170 ~G~ii~iss~~~~~~~p~~-------------~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~  236 (299)
T PRK06300        170 GGSTISLTYLASMRAVPGY-------------GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF  236 (299)
T ss_pred             CCeEEEEeehhhcCcCCCc-------------cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc
Confidence             589999987654332211             124999999    45666666665 4999999999999998642111 


Q ss_pred             -HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          181 -NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       181 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       .-...... ...++.+.+.+++++.++.|+-
T Consensus       237 ~~~~~~~~~-~~~p~~r~~~peevA~~v~~L~  267 (299)
T PRK06300        237 IERMVDYYQ-DWAPLPEPMEAEQVGAAAAFLV  267 (299)
T ss_pred             cHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHh
Confidence             01111111 1223567778899888887764

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.82  E-value=2.7e-19  Score=174.34  Aligned_cols=174  Identities=31%  Similarity=0.346  Sum_probs=129.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCCCCCCC---C------------CCCCCeEEEEccCCC------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISG---L------------PSEGALELVYGDVTD------   55 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~---~------------~~~~~~~~~~~D~~~------   55 (229)
                      |+|+|||+|||+|++++++|++++    ++|+++.|.......   +            ....+++++.+|+++      
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            579999999999999999999887    899999997532111   0            001268899999975      


Q ss_pred             hhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-----------
Q 027007           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----------  124 (229)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  124 (229)
                      .+.+.++.+++|+|||+|+..... ..+......|+.++.++++++.+.. .++++|+||.++|+....           
T Consensus      1052 ~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1052 DEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             HHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhcc
Confidence            456677777899999999986532 2344455689999999999998764 679999999998864210           


Q ss_pred             -cccCCCCcc--ccccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          125 -YIADENQVH--EEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       125 -~~~~~~~~~--~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ...++....  ....+.+.|+.||+.+|.++..+...|++++++|||.+||+..
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~ 1184 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSK 1184 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCC
Confidence             011122111  1112345799999999999998877799999999999999864

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=3.5e-19  Score=135.10  Aligned_cols=156  Identities=22%  Similarity=0.289  Sum_probs=120.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcC-------C
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------G   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~   65 (229)
                      +++||||+|+||++++++|+++|+ .|+++.|+.+..+...        ....+.++.+|+++.+++.++++       .
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGP   81 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999996 6888888754432210        12356788999999988876654       3


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|+|||+++....      +.+++++.+++|+.++.++++++.+.. .+++|++||..+.-+...              .
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~~--------------~  146 (180)
T smart00822       82 LRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNPG--------------Q  146 (180)
T ss_pred             eeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCCC--------------c
Confidence            6999999986321      224567789999999999999997653 579999999765433221              2


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCcee
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIY  172 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~  172 (229)
                      ..|+.+|.+.+.+++.+...+++++.+.||.+-
T Consensus       147 ~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 ANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            349999999999998888889999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-19  Score=143.61  Aligned_cols=188  Identities=15%  Similarity=0.102  Sum_probs=129.3

Q ss_pred             HHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC----CccEEEEeCcccCCCCCCchhhhHhhH
Q 027007           16 LCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALVEPWLPDPSRFFAVNV   91 (229)
Q Consensus        16 l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~n~   91 (229)
                      ++++|+++|++|++++|+.++.+      ..+++++|++|.+++.++++    ++|+||||||...  ..++++.+++|+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--~~~~~~~~~vN~   72 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--TAPVELVARVNF   72 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC--CCCHHHhhhhch
Confidence            47889999999999999865432      23567999999999988775    5899999999753  356788999999


Q ss_pred             HHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCC----C------c---cccccccCcHHHHHHHHHHHH----
Q 027007           92 EGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADEN----Q------V---HEEKYFCTQYERSKAVADKIA----  153 (229)
Q Consensus        92 ~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~----~------~---~~~~~~~~~Y~~sK~~~e~~~----  153 (229)
                      .++..+++++.+.+. .++||++||..+++........+.    .      .   ..+......|+.||...+.+.    
T Consensus        73 ~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (241)
T PRK12428         73 LGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA  152 (241)
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHH
Confidence            999999999988642 369999999988753221111000    0      0   001122467999999665554    


Q ss_pred             -HHHHhcCCCeEEEecCceecCCCCchhHHH-HHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          154 -LQAASEGLPIVPVYPGVIYGPGKLTTGNLV-AKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       154 -~~~~~~gi~~~~irpg~i~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       .++.++|+++++|+||.+.++......... .........+.+++..+++++.++.|+.
T Consensus       153 ~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~  212 (241)
T PRK12428        153 QPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLC  212 (241)
T ss_pred             HHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHc
Confidence             444556999999999999999643211110 1111112234556778888888877754

>PRK12320 hypothetical protein; Provisional

Probab=99.81  E-value=1.9e-18  Score=154.96  Aligned_cols=138  Identities=20%  Similarity=0.299  Sum_probs=107.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      ||||||||+||||++++++|+++|++|++++|.+....    ...++++++|++|+. +.+++.++|+|||+|+...   
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~---   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT---   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc---
Confidence            89999999999999999999999999999998754321    136789999999984 7788889999999998531   


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                      .   ....+|+.++.+++++|.+.+ . ++||+||.+  +..                 ..|.    .+|.++..   .+
T Consensus        73 ~---~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~--G~~-----------------~~~~----~aE~ll~~---~~  121 (699)
T PRK12320         73 S---APGGVGITGLAHVANAAARAG-A-RLLFVSQAA--GRP-----------------ELYR----QAETLVST---GW  121 (699)
T ss_pred             c---chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC--CCC-----------------cccc----HHHHHHHh---cC
Confidence            1   123589999999999999876 3 799999863  211                 0132    25555443   46


Q ss_pred             CCeEEEecCceecCCCC
Q 027007          161 LPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       161 i~~~~irpg~i~g~~~~  177 (229)
                      ++++++|++++|||...
T Consensus       122 ~p~~ILR~~nVYGp~~~  138 (699)
T PRK12320        122 APSLVIRIAPPVGRQLD  138 (699)
T ss_pred             CCEEEEeCceecCCCCc
Confidence            89999999999999643

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.81  E-value=4.3e-20  Score=139.98  Aligned_cols=161  Identities=20%  Similarity=0.213  Sum_probs=128.8

Q ss_pred             EEEEEcC-CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--------CccEEEEe
Q 027007            2 KILVSGA-SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg-~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~d~vi~~   72 (229)
                      +|||||+ .|+||.++++++.++|+.|+++.|+.+..+.+....++...+.|+++++++.+..+        +.|+++||
T Consensus         9 ~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NN   88 (289)
T KOG1209|consen    9 KVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNN   88 (289)
T ss_pred             eEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcC
Confidence            6888887 57899999999999999999999998877776655578889999999999876643        37999999


Q ss_pred             Cccc------CCCCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||..      +.+.++.+..|++|+.|..++.+++....  .++.||+++|..++.+-+.              .+.|++
T Consensus        89 AG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf--------------~~iYsA  154 (289)
T KOG1209|consen   89 AGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF--------------GSIYSA  154 (289)
T ss_pred             CCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch--------------hhhhhH
Confidence            9962      33445667789999999999999887442  2459999999998876432              355999


Q ss_pred             HHHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ||++...+++    ++.+.|++|+.+-+|.+-+.-+
T Consensus       155 sKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  155 SKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             HHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence            9996665554    4557799999999999988643

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.80  E-value=2.3e-19  Score=143.63  Aligned_cols=209  Identities=25%  Similarity=0.261  Sum_probs=147.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-------CCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +|+||||+.++|.+++.++..+|++|+++.|+..++.++...       ..+.+..+|+.|.+++...++       .+|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            689999999999999999999999999999998765443221       236688899999999877765       379


Q ss_pred             EEEEeCccc------CCCCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      .+|+|||..      +.+.++.+..+++|..++.++++++.+.++    .++|+.+||..+.-+-.++            
T Consensus       115 ~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy------------  182 (331)
T KOG1210|consen  115 NLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY------------  182 (331)
T ss_pred             eEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc------------
Confidence            999999972      223345667899999999999999987753    2389999998766554443            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhh--------
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRH--------  205 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  205 (229)
                        +.|+.+|.    +++.+.+|...+|+.+....|+.+-+|+-... +...-..-..+........+++++.        
T Consensus       183 --saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-n~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  183 --SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-NKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             --cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-cccCchheeeecCCCCCcCHHHHHHHHHhHHhh
Confidence              33777776    66666677777899999999999999974211 1000011111111122344555442        


Q ss_pred             -----hhHHHHHHHhhhhhcCcccc
Q 027007          206 -----SCKFLTWLLSSLEQAGLDFA  225 (229)
Q Consensus       206 -----~~~~l~~~~~~~~~~~~~~~  225 (229)
                           ++.|.-|++..+.++..|..
T Consensus       260 g~f~~~~~~~g~l~s~~~~~~~p~~  284 (331)
T KOG1210|consen  260 GNFTVSLGFTGFLLSILSQGMSPGD  284 (331)
T ss_pred             cCeEEeechHHHHHHHhhcCCCcch
Confidence                 35666688888877776654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.80  E-value=1e-18  Score=140.60  Aligned_cols=162  Identities=28%  Similarity=0.333  Sum_probs=122.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC--CCC----C-CC-CCeEEEEccCCC-hhhHHhhcC-------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGL----P-SE-GALELVYGDVTD-YRSLVDACF-------   64 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~----~-~~-~~~~~~~~D~~~-~~~~~~~~~-------   64 (229)
                      ++++||||+++||++++++|+++|++|+++.|..+..  +.+    . .. ..+.+..+|+++ .+++..+++       
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g   85 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFG   85 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3699999999999999999999999998888875431  111    1 00 146778899998 887765543       


Q ss_pred             CccEEEEeCcccC---C----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           65 GCHVIFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        65 ~~d~vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ++|++|||||...   .    ..+++++.+++|+.++..+.+++.+.+..++||++||..+. .....            
T Consensus        86 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~------------  152 (251)
T COG1028          86 RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG------------  152 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC------------
Confidence            4899999999742   1    22467889999999999999976665433399999998776 43321            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                       ...|+.||.    +++.++.++.++|++++.|.||.+.++..
T Consensus       153 -~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~  194 (251)
T COG1028         153 -QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMT  194 (251)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence             134999999    55566666667799999999998887764

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=7.8e-19  Score=134.30  Aligned_cols=193  Identities=20%  Similarity=0.258  Sum_probs=145.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--e-EEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--S-VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      ||||||||+|.+|++|.+.+.+.|.  + .+.....                .+|+++.++.++++.  ++.+|||+|+.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------d~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------DADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------cccccchHHHHHHHhccCCceeeehHhh
Confidence            5899999999999999999998875  2 3333222                579999999999886  58999999998


Q ss_pred             cCC---CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc--ccccccCcHHHHHHHHH
Q 027007           76 VEP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVAD  150 (229)
Q Consensus        76 ~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~~~e  150 (229)
                      ++.   .......+++.|+....|++..|..++ .+++|++.|.+.|.....++.+|+...  ++.+....|+.+|.+..
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~id  144 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMID  144 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHH
Confidence            654   345567889999999999999999996 789999999999988777778877533  22233446999998887


Q ss_pred             HHHHHHH-hcCCCeEEEecCceecCCCCc---hhHHHHHH----------------hhcccceeeeehhhHhhhhhhHHH
Q 027007          151 KIALQAA-SEGLPIVPVYPGVIYGPGKLT---TGNLVAKL----------------QWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       151 ~~~~~~~-~~gi~~~~irpg~i~g~~~~~---~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      -.-+.+. ++|...+.+.|.++|||.+.-   .+..++.+                +|++..+.+.+....|++.+|.|+
T Consensus       145 v~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v  224 (315)
T KOG1431|consen  145 VQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV  224 (315)
T ss_pred             HHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence            7777776 569999999999999996521   12222222                245555566667777777776665

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.79  E-value=1.1e-18  Score=143.72  Aligned_cols=171  Identities=20%  Similarity=0.213  Sum_probs=122.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----C---CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L---PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~---~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      .++|||++++||.+++++|+.+|.+|+...|+.++.++    +   .....+.++++|+++.+++.++.+       ..|
T Consensus        37 ~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ld  116 (314)
T KOG1208|consen   37 VALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLD  116 (314)
T ss_pred             EEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCcc
Confidence            58999999999999999999999999999999743222    1   112467889999999999877654       479


Q ss_pred             EEEEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecC-C-CcccCCCCccccccc
Q 027007           68 VIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGST-D-GYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~-~-~~~~~~~~~~~~~~~  138 (229)
                      ++|||||+...    +.+..+..+.+|..|++.|.+.+.+..+   ..|||++||... +.. . ....++....  -..
T Consensus       117 vLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~--~~~  193 (314)
T KOG1208|consen  117 VLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKL--YSS  193 (314)
T ss_pred             EEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccC--ccc
Confidence            99999998432    3345778899999999999998876532   259999999765 111 0 0111111100  001


Q ss_pred             cCcHHHHHHHHHHHHHHHHh---cCCCeEEEecCceecCC
Q 027007          139 CTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~---~gi~~~~irpg~i~g~~  175 (229)
                      ...|+.||..-...+.++++   .|+.++.+.||.+.++.
T Consensus       194 ~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  194 DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            12499999844444444432   18999999999999984

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.78  E-value=1.5e-17  Score=131.20  Aligned_cols=166  Identities=25%  Similarity=0.333  Sum_probs=115.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-CccEEEEeCccc--CC-
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV--EP-   78 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~~~--~~-   78 (229)
                      |+||||||+||++|+.+|.+.||+|++++|++.+......     .   .+...+.+.+... ++|+|||+||..  +. 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----~---~v~~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----P---NVTLWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----c---cccccchhhhcccCCCCEEEECCCCcccccc
Confidence            6899999999999999999999999999999865443211     0   1112233333334 799999999962  22 


Q ss_pred             CCC-CchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 WLP-DPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 ~~~-~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                      |.+ .-++..+..+..|..|.+++..... ++.+|.-|...-||.......+|+.+...+ |   -+..-...|..++..
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~-F---la~lc~~WE~~a~~a  148 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDD-F---LAQLCQDWEEEALQA  148 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCC-h---HHHHHHHHHHHHhhh
Confidence            332 2345688889999999999986543 345565555566777766667776444332 2   223334677888777


Q ss_pred             HhcCCCeEEEecCceecCCCCchh
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLTTG  180 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~~~  180 (229)
                      ...|.|++.+|.|.|.+|......
T Consensus       149 ~~~gtRvvllRtGvVLs~~GGaL~  172 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPDGGALG  172 (297)
T ss_pred             hhcCceEEEEEEEEEecCCCcchh
Confidence            667999999999999998654333

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.78  E-value=2.8e-18  Score=137.67  Aligned_cols=160  Identities=21%  Similarity=0.206  Sum_probs=124.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC---CCCeEEEEccCCChhhHHhhcC---------CccEEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF---------GCHVIF   70 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~---------~~d~vi   70 (229)
                      |+|||.-.++|+.+|++|.++|+.|++....++..+.+..   +++..-++.|+++++++.++.+         +.-.||
T Consensus        32 VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglV  111 (322)
T KOG1610|consen   32 VLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLV  111 (322)
T ss_pred             EEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEE
Confidence            8999999999999999999999999999876654343321   4577888999999999988765         245899


Q ss_pred             EeCcccC---C----CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||+..   +    +.+++...+++|+.|+.++.+++.+.-  ..+|+|++||..+--+.+  .            ..+
T Consensus       112 NNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p--~------------~g~  177 (322)
T KOG1610|consen  112 NNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP--A------------LGP  177 (322)
T ss_pred             eccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc--c------------ccc
Confidence            9999631   1    224677889999999999999987753  235999999987643322  1            256


Q ss_pred             HHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCC
Q 027007          142 YERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       142 Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      |+.||...|    .+-+|+.+.|++|.+|-||.+-++..
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence            999999554    55567778899999999997777754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.77  E-value=3.6e-18  Score=145.51  Aligned_cols=159  Identities=18%  Similarity=0.139  Sum_probs=114.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC-
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE-   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~-   77 (229)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...  ....+..+.+|++|.+++.+.++++|++|||||... 
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~  258 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGINVH  258 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCC
Confidence            36999999999999999999999999999999765432111  112466789999999999999999999999998632 


Q ss_pred             --CCCCCchhhhHhhHHHHHHHHHHHHhcCCC-------ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           78 --PWLPDPSRFFAVNVEGLKNVVQAAKETKTV-------EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        78 --~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                        .+.+++++.+++|+.++.++++++.+.+..       ..+|++|+ +...+ +              ....|+.||..
T Consensus       259 ~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~--------------~~~~Y~ASKaA  322 (406)
T PRK07424        259 GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-A--------------FSPLYELSKRA  322 (406)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-C--------------CchHHHHHHHH
Confidence              223356788999999999999999775311       13555554 22111 0              01349999997


Q ss_pred             HHHHHHHHH-hcCCCeEEEecCceecCC
Q 027007          149 ADKIALQAA-SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       149 ~e~~~~~~~-~~gi~~~~irpg~i~g~~  175 (229)
                      .+.+..... ..++.+..+.||.+.++.
T Consensus       323 l~~l~~l~~~~~~~~I~~i~~gp~~t~~  350 (406)
T PRK07424        323 LGDLVTLRRLDAPCVVRKLILGPFKSNL  350 (406)
T ss_pred             HHHHHHHHHhCCCCceEEEEeCCCcCCC
Confidence            777643222 235667777788776654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.76  E-value=6.1e-19  Score=133.28  Aligned_cols=142  Identities=23%  Similarity=0.278  Sum_probs=110.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcC--CCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR--TSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~--~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      +++||||+++||++++++|+++| ..|+++.|+  .+..+.+    . ....++++++|+++.+++.++++       .+
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999999999999999995 578888888  2222211    1 12478899999999998877764       58


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |++|||||....      +.+++++.+++|+.++..+.+++.+. ..++||++||..+..+.+..              .
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~--------------~  146 (167)
T PF00106_consen   82 DILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVRGSPGM--------------S  146 (167)
T ss_dssp             SEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTSSSTTB--------------H
T ss_pred             cccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhccCCCCC--------------h
Confidence            999999998542      22456788999999999999999994 46799999998877655433              3


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 027007          141 QYERSKAVADKIALQAAS  158 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~  158 (229)
                      .|+.+|+..+.+.+.++.
T Consensus       147 ~Y~askaal~~~~~~la~  164 (167)
T PF00106_consen  147 AYSASKAALRGLTQSLAA  164 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH
Confidence            499999988888777654

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.74  E-value=1.2e-17  Score=128.00  Aligned_cols=165  Identities=20%  Similarity=0.159  Sum_probs=119.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEEc-CCCCC-CCCC----CCCCeEEEEccCCChhhHHhhcC---------C
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVR-RTSDI-SGLP----SEGALELVYGDVTDYRSLVDACF---------G   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r-~~~~~-~~~~----~~~~~~~~~~D~~~~~~~~~~~~---------~   65 (229)
                      +++||||+++||.-|+++|.+. |.++++..+ ++++. +++.    ..+++++++.|+++.+++.++.+         +
T Consensus         5 sv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~G   84 (249)
T KOG1611|consen    5 SVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDG   84 (249)
T ss_pred             cEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCC
Confidence            5899999999999999999975 567666555 45552 2222    23689999999999998866654         4


Q ss_pred             ccEEEEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcCC--------------CceEEEEccceeeecCCC
Q 027007           66 CHVIFHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETKT--------------VEKIIYTSSFFALGSTDG  124 (229)
Q Consensus        66 ~d~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------------~~~iv~~sS~~~~~~~~~  124 (229)
                      .|++|+|||+..       +....|.+.+++|..++..+.|++.+...              ...||++||..+-.+...
T Consensus        85 lnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~  164 (249)
T KOG1611|consen   85 LNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFR  164 (249)
T ss_pred             ceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCC
Confidence            789999999732       22234778899999999999998865411              126898988754422111


Q ss_pred             cccCCCCccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          125 YIADENQVHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       125 ~~~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      .           .....|..||++.    +.++-++.++++-++.++||||-+.+..
T Consensus       165 ~-----------~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg  210 (249)
T KOG1611|consen  165 P-----------GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG  210 (249)
T ss_pred             C-----------cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC
Confidence            0           1135699999954    4555555677899999999999998753

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.74  E-value=3.4e-17  Score=139.40  Aligned_cols=183  Identities=23%  Similarity=0.310  Sum_probs=136.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCCCCCCC------C---------CC-----CCCeEEEEccCCCh--
Q 027007            2 KILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISG------L---------PS-----EGALELVYGDVTDY--   56 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~------~---------~~-----~~~~~~~~~D~~~~--   56 (229)
                      +|+|||||||+|+-+++.|++.-   .+++++.|.....+.      .         .+     ..++..+.+|++++  
T Consensus        14 ~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~L   93 (467)
T KOG1221|consen   14 TIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDL   93 (467)
T ss_pred             eEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCccc
Confidence            69999999999999999999863   478888887543211      0         00     14677889999975  


Q ss_pred             ----hhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-----Cccc
Q 027007           57 ----RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-----GYIA  127 (229)
Q Consensus        57 ----~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~~~  127 (229)
                          .++..+.+++|+|||+|+.+... +..+..+.+|..||.++++.|++....+.+||+||.++.....     .++.
T Consensus        94 Gis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~  172 (467)
T KOG1221|consen   94 GISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPM  172 (467)
T ss_pred             CCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCc
Confidence                45666778899999999987654 3456678999999999999999987778999999988773221     0011


Q ss_pred             CCC------------C---------ccccccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHH
Q 027007          128 DEN------------Q---------VHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKL  186 (229)
Q Consensus       128 ~~~------------~---------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~  186 (229)
                      .+.            .         +.-.+.+++.|..+|+++|.++.+.+ ++++++++||+.|......+..+|+...
T Consensus       173 ~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-~~lPivIiRPsiI~st~~EP~pGWidn~  251 (467)
T KOG1221|consen  173 PETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-ENLPLVIIRPSIITSTYKEPFPGWIDNL  251 (467)
T ss_pred             cccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-cCCCeEEEcCCceeccccCCCCCccccC
Confidence            110            0         00012357889999999999999875 4799999999999998877776666554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=1.6e-16  Score=125.54  Aligned_cols=172  Identities=23%  Similarity=0.201  Sum_probs=136.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC---------CCCCCCeEEEEccCCChhhHHhhcC--CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---------LPSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   70 (229)
                      ++||||-||+-|+.|++.|+++|++|.++.|+.+....         ...+..++.+.+|++|...+.++++  ++|-|+
T Consensus         4 ~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIY   83 (345)
T COG1089           4 VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIY   83 (345)
T ss_pred             eEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchhhe
Confidence            47999999999999999999999999999997432211         1122458899999999999999987  589999


Q ss_pred             EeCcc--cCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        71 ~~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      |+|+.  +..+.+.|....+++..||.+|+++++-.+. .-||...||+-.||.....+-+|.+|.-|   .++|+.+|.
T Consensus        84 NLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP---rSPYAvAKl  160 (345)
T COG1089          84 NLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYAVAKL  160 (345)
T ss_pred             eccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC---CCHHHHHHH
Confidence            99986  4557788889999999999999999988753 34999999999999877777777666543   577999999


Q ss_pred             HHHHHHHHHH-hcCCCeEEEecCceecCCC
Q 027007          148 VADKIALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       148 ~~e~~~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      .+.-+...+. .+|+-.|.=...+--+|..
T Consensus       161 Ya~W~tvNYResYgl~AcnGILFNHESP~R  190 (345)
T COG1089         161 YAYWITVNYRESYGLFACNGILFNHESPLR  190 (345)
T ss_pred             HHHheeeehHhhcCceeecceeecCCCCCC
Confidence            8877766665 4687776666666555643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.72  E-value=1.5e-17  Score=133.38  Aligned_cols=160  Identities=19%  Similarity=0.210  Sum_probs=125.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC------CCeEEEEccCCChhh----HHhhcCC--ccEEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRS----LVDACFG--CHVIF   70 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~----~~~~~~~--~d~vi   70 (229)
                      .+|||||.+||++.+++|+++|.+|++++|++++++.+..+      -.++++..|.++.+.    +++.+.+  +-++|
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILV  131 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILV  131 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEE
Confidence            58999999999999999999999999999999886654322      357889999998765    4444444  55899


Q ss_pred             EeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||+|....        +....+..+.+|+.++..+.+.+.+.|.   .+-||++||.++.-+.+.              .
T Consensus       132 NNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~--------------~  197 (312)
T KOG1014|consen  132 NNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL--------------L  197 (312)
T ss_pred             ecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh--------------H
Confidence            99997431        1113456789999999999999998863   347999999887665443              3


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +.|+.+|.    +++.+..|+..+||.+-.+-|..+-+++.
T Consensus       198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence            55999999    45566677778899999999999998764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.70  E-value=1.5e-15  Score=112.91  Aligned_cols=163  Identities=23%  Similarity=0.358  Sum_probs=118.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |||.|+|+||-+|++|+++...+||+|+++.|++++....   ..+.+++.|+-|++++.+.+.+.|+||..-+...   
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~---   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA---   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCC---
Confidence            9999999999999999999999999999999999887654   2678899999999999999999999998866432   


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccc-cccccCcHHHHHHHHHHHHHHHHhc
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                      .+.++.   -......|++.+...+ ..|++.++.....--.++     ....+ |..+-..|..++..+|.+-..-...
T Consensus        75 ~~~~~~---~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g-----~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~  145 (211)
T COG2910          75 SDNDEL---HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG-----TRLVDTPDFPAEYKPEALAQAEFLDSLRAEK  145 (211)
T ss_pred             CChhHH---HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC-----ceeecCCCCchhHHHHHHHHHHHHHHHhhcc
Confidence            222221   2233556777776664 679988887644321111     22222 2222344666787877766555555


Q ss_pred             CCCeEEEecCceecCCCCc
Q 027007          160 GLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~~~  178 (229)
                      +++|+.++|..++-|+.++
T Consensus       146 ~l~WTfvSPaa~f~PGerT  164 (211)
T COG2910         146 SLDWTFVSPAAFFEPGERT  164 (211)
T ss_pred             CcceEEeCcHHhcCCcccc
Confidence            7999999999999997543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.67  E-value=7.2e-16  Score=153.91  Aligned_cols=159  Identities=20%  Similarity=0.189  Sum_probs=124.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCC----------------------------------CC-------
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDI----------------------------------SG-------   39 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~----------------------------------~~-------   39 (229)
                      .+|||||+++||.+++++|+++ |++|++++|+....                                  +.       
T Consensus      1999 vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~ 2078 (2582)
T TIGR02813      1999 VFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLS 2078 (2582)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccch
Confidence            5899999999999999999998 69999999982100                                  00       


Q ss_pred             ----------CC-CCCCeEEEEccCCChhhHHhhcC------CccEEEEeCcccC------CCCCCchhhhHhhHHHHHH
Q 027007           40 ----------LP-SEGALELVYGDVTDYRSLVDACF------GCHVIFHTAALVE------PWLPDPSRFFAVNVEGLKN   96 (229)
Q Consensus        40 ----------~~-~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~   96 (229)
                                +. ....+.++.+|++|.+++.+++.      ++|+|||+||...      .+.++|++.+++|+.|+++
T Consensus      2079 ~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~ 2158 (2582)
T TIGR02813      2079 SLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLS 2158 (2582)
T ss_pred             hHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence                      00 01357889999999998877664      4899999999732      2335688899999999999


Q ss_pred             HHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc--CCCeEEEecCceecC
Q 027007           97 VVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGP  174 (229)
Q Consensus        97 l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--gi~~~~irpg~i~g~  174 (229)
                      +++++.+.+ .++||++||..++.+..+.              ..|+.+|.....+++.++..  ++++++|.||..-|+
T Consensus      2159 Ll~al~~~~-~~~IV~~SSvag~~G~~gq--------------s~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2159 LLAALNAEN-IKLLALFSSAAGFYGNTGQ--------------SDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHhC-CCeEEEEechhhcCCCCCc--------------HHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            999998764 4689999998776443332              34999999888888777643  589999999998876


Q ss_pred             C
Q 027007          175 G  175 (229)
Q Consensus       175 ~  175 (229)
                      +
T Consensus      2224 m 2224 (2582)
T TIGR02813      2224 M 2224 (2582)
T ss_pred             c
Confidence            5

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.66  E-value=1.7e-15  Score=124.33  Aligned_cols=135  Identities=14%  Similarity=0.107  Sum_probs=99.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc------CC-ccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC------FG-CHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~-~d~vi~~a~   74 (229)
                      +|+||||||++|++++++|+++|++|++++|++++...    .+++.+.+|+.|++++.+++      ++ +|.|+|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            58999999999999999999999999999999765432    25667789999999999988      56 999999976


Q ss_pred             ccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      ...    +  .     .....++++++++.+ +++||++||.......                     ..+...+..++
T Consensus        77 ~~~----~--~-----~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~---------------------~~~~~~~~~l~  123 (285)
T TIGR03649        77 PIP----D--L-----APPMIKFIDFARSKG-VRRFVLLSASIIEKGG---------------------PAMGQVHAHLD  123 (285)
T ss_pred             CCC----C--h-----hHHHHHHHHHHHHcC-CCEEEEeeccccCCCC---------------------chHHHHHHHHH
Confidence            321    1  1     234568899998885 7899999986432110                     01112222222


Q ss_pred             HHHhcCCCeEEEecCceecCC
Q 027007          155 QAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       155 ~~~~~gi~~~~irpg~i~g~~  175 (229)
                      .  ..|++++++||+++|...
T Consensus       124 ~--~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       124 S--LGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             h--ccCCCEEEEeccHHhhhh
Confidence            2  138999999999988653

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.64  E-value=3.4e-15  Score=118.21  Aligned_cols=152  Identities=24%  Similarity=0.251  Sum_probs=121.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC----CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      +-|.|||||+|+.++++|++.|..|++-.|..+.    +..+-+.+++-+...|+.|.+++.++.+..++|||+-|.-  
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd--  141 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRD--  141 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccc--
Confidence            4689999999999999999999999999996432    2223334688899999999999999999999999998852  


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      ++..--.+.++|+.+..+|++.|+..+ +.|+|++|+..+.-..                .+-|-.+|+..|..+++.-+
T Consensus       142 ~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~s----------------~Sr~LrsK~~gE~aVrdafP  204 (391)
T KOG2865|consen  142 YETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVKS----------------PSRMLRSKAAGEEAVRDAFP  204 (391)
T ss_pred             cccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccccC----------------hHHHHHhhhhhHHHHHhhCC
Confidence            112223467899999999999999985 7899999987532111                13378899999999988655


Q ss_pred             cCCCeEEEecCceecCCC
Q 027007          159 EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~~  176 (229)
                      +   .+++||..+||..+
T Consensus       205 e---AtIirPa~iyG~eD  219 (391)
T KOG2865|consen  205 E---ATIIRPADIYGTED  219 (391)
T ss_pred             c---ceeechhhhcccch
Confidence            4   79999999999875

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.63  E-value=3.5e-15  Score=114.54  Aligned_cols=154  Identities=27%  Similarity=0.325  Sum_probs=110.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC-CCCCC------CC-CCCCeEEEEccCCChhhHHhhcC-------C
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT-SDISG------LP-SEGALELVYGDVTDYRSLVDACF-------G   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~-~~~~~------~~-~~~~~~~~~~D~~~~~~~~~~~~-------~   65 (229)
                      ++|||||.|+||..+++.|++++ .+|+++.|+. ...+.      +. ....++++++|++|++++.+++.       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999998 5899999983 22111      11 12468899999999999988764       3


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ++.|||+|+....      +.++++..+..-+.++.+|.+++... ....+|.+||..+.-+..+.              
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHhccCcch--------------
Confidence            6899999997422      22345667888899999999988775 46789999998765444333              


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCc
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGV  170 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~  170 (229)
                      ..|+.+..+.+.+++.....|.++..|.-+.
T Consensus       147 ~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  147 SAYAAANAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence            3499999999999998877888888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.53  E-value=2.7e-14  Score=113.87  Aligned_cols=146  Identities=32%  Similarity=0.396  Sum_probs=101.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+|+||||.+|+++++.|++.+++|.++.|+...  .+.+.. .+++.+++|..|.+++.++++++|.||.+.+...   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC---
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCcch---
Confidence            7999999999999999999999999999998632  222211 2668899999999999999999999998876432   


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                             ..-+....++++++++.+ +++||+.|....+.....     ..+ .     ...-..|...|..+++   .+
T Consensus        77 -------~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~-----~~p-~-----~~~~~~k~~ie~~l~~---~~  134 (233)
T PF05368_consen   77 -------PSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSG-----SEP-E-----IPHFDQKAEIEEYLRE---SG  134 (233)
T ss_dssp             -------CCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTT-----STT-H-----HHHHHHHHHHHHHHHH---CT
T ss_pred             -------hhhhhhhhhHHHhhhccc-cceEEEEEeccccccccc-----ccc-c-----chhhhhhhhhhhhhhh---cc
Confidence                   223455788999999996 899997443322211100     000 0     1122456666666554   38


Q ss_pred             CCeEEEecCceecC
Q 027007          161 LPIVPVYPGVIYGP  174 (229)
Q Consensus       161 i~~~~irpg~i~g~  174 (229)
                      +++++||||.++..
T Consensus       135 i~~t~i~~g~f~e~  148 (233)
T PF05368_consen  135 IPYTIIRPGFFMEN  148 (233)
T ss_dssp             SEBEEEEE-EEHHH
T ss_pred             ccceeccccchhhh
Confidence            99999999987654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.52  E-value=6e-13  Score=108.19  Aligned_cols=148  Identities=31%  Similarity=0.457  Sum_probs=112.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+||||||||++|++++++|.++|++|.++.|++++.....  ..+++..+|+.++.++..++++.|.++++.+... +.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            89999999999999999999999999999999988766665  5889999999999999999999999999987543 21


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                      .   ...........+..+.+. . ..++++++|...+....                ...|..+|..+|.....   .|
T Consensus        78 ~---~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~~~----------------~~~~~~~~~~~e~~l~~---sg  133 (275)
T COG0702          78 D---AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADAAS----------------PSALARAKAAVEAALRS---SG  133 (275)
T ss_pred             c---chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCCCC----------------ccHHHHHHHHHHHHHHh---cC
Confidence            1   223344444555555554 1 24578887765433211                13489999999988776   57


Q ss_pred             CCeEEEecCceecCC
Q 027007          161 LPIVPVYPGVIYGPG  175 (229)
Q Consensus       161 i~~~~irpg~i~g~~  175 (229)
                      ++.+.+||..+|...
T Consensus       134 ~~~t~lr~~~~~~~~  148 (275)
T COG0702         134 IPYTTLRRAAFYLGA  148 (275)
T ss_pred             CCeEEEecCeeeecc
Confidence            888899976666654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.48  E-value=6.7e-14  Score=107.57  Aligned_cols=160  Identities=21%  Similarity=0.238  Sum_probs=111.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeE--EEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSV--RALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V--~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +|+||++.+||.-++..+.+++.+.  ++..|.....+.+.-.  .......+|+++..-+.+..+       +-|.|||
T Consensus         9 illTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~   88 (253)
T KOG1204|consen    9 ILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIH   88 (253)
T ss_pred             EEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEe
Confidence            6899999999998888888887654  4444433222211100  112233456655443333222       3699999


Q ss_pred             eCcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcC--C--CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           72 TAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK--T--VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        72 ~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||..++         +...|.++++.|+.+...|.+.+.+..  .  .+.+|++||.++..+-.+              
T Consensus        89 NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~--------------  154 (253)
T KOG1204|consen   89 NAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS--------------  154 (253)
T ss_pred             cCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH--------------
Confidence            9997432         234688999999999999988887652  1  368999999877655432              


Q ss_pred             cCcHHHHHHHHHHHHHHHH--h-cCCCeEEEecCceecCCC
Q 027007          139 CTQYERSKAVADKIALQAA--S-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~--~-~gi~~~~irpg~i~g~~~  176 (229)
                      +..|+.+|++-+.+.+.++  + .++++..++||.+-++++
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq  195 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ  195 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence            3569999999998888876  2 389999999999999976

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.39  E-value=6.7e-12  Score=96.77  Aligned_cols=197  Identities=16%  Similarity=0.170  Sum_probs=132.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++||+|-.  ..|+-.|+++|.++|.++..+...+.   +.+++.+. ....+++||+++.+++.+++.       ++|.
T Consensus         8 ~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~   87 (259)
T COG0623           8 RILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDG   87 (259)
T ss_pred             eEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccE
Confidence            68899874  46999999999999999998887652   22222222 234568999999998877764       5899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCCCc-eEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |+|+-+..+          .+.+.+...+++...+...+.+++.+.++.+ .+|-++=..+.--.+.+            
T Consensus        88 lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnY------------  155 (259)
T COG0623          88 LVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNY------------  155 (259)
T ss_pred             EEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCC------------
Confidence            999998743          2334455567777778888889998887543 66655422111111111            


Q ss_pred             ccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHh-hcccceeeeehhhHhhhhhhHHHHH
Q 027007          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQ-WKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                        +.-+.+|+..|.    ++.+++++|||||.|+-|.+.+--......+-..+- +....++++....+++++++.||-.
T Consensus       156 --NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlS  233 (259)
T COG0623         156 --NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLS  233 (259)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhc
Confidence              347889986554    455566789999999999998753333333322222 2344566777789999999887743

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.32  E-value=3.3e-11  Score=101.59  Aligned_cols=161  Identities=27%  Similarity=0.289  Sum_probs=104.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHh-hcCC----ccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVD-ACFG----CHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~-~~~~----~d~vi~   71 (229)
                      ++|+|+||||.+|+.+++.|+++|+.|.++.|+.++...+..    .....-+..|.....+... +...    ..+++-
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~  159 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIK  159 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccceeEEe
Confidence            479999999999999999999999999999999877665533    2344445555555444332 2222    345555


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +++--+..+ +..--..+...|+.+++++|..++ ++|+|++||..+......+..       . .....+..+|..+|.
T Consensus       160 ~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~~~~-------~-~~~~~~~~~k~~~e~  229 (411)
T KOG1203|consen  160 GAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQPPNI-------L-LLNGLVLKAKLKAEK  229 (411)
T ss_pred             cccCCCCcc-cCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCCchh-------h-hhhhhhhHHHHhHHH
Confidence            555322221 112223577899999999998885 899999988754433221111       0 001123456666666


Q ss_pred             HHHHHHhcCCCeEEEecCceecC
Q 027007          152 IALQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       152 ~~~~~~~~gi~~~~irpg~i~g~  174 (229)
                      ..+   +.|++..+||||...-.
T Consensus       230 ~~~---~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  230 FLQ---DSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHH---hcCCCcEEEeccccccC
Confidence            555   46899999999988664

>PRK06720 hypothetical protein; Provisional

Probab=99.28  E-value=3.9e-11  Score=90.94  Aligned_cols=116  Identities=12%  Similarity=0.024  Sum_probs=79.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEccCCChhhHHhhc-------CCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~-------~~~d~v   69 (229)
                      .++||||+++||++++++|+++|++|++++|+.+..+.    +. ......++.+|+++.+++.+++       .++|++
T Consensus        18 ~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDil   97 (169)
T PRK06720         18 VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDML   97 (169)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999987653321    11 1124667899999998886654       368999


Q ss_pred             EEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcC----------CCceEEEEccce
Q 027007           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK----------TVEKIIYTSSFF  117 (229)
Q Consensus        70 i~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~iv~~sS~~  117 (229)
                      |||||....    +..+....-..|+.++....+.+.+.+          ..+||..+||.+
T Consensus        98 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         98 FQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             EECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            999997321    111111233556666666665554331          234777777754

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.23  E-value=2e-10  Score=85.25  Aligned_cols=164  Identities=23%  Similarity=0.273  Sum_probs=117.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+.+|.|+||-.|+.+.+++++.+  .+|+++.|+.....  .....+.....|....++..+..+++|+.+.+-|....
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~--at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRg   96 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP--ATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRG   96 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc--cccceeeeEEechHHHHHHHhhhcCCceEEEeeccccc
Confidence            578999999999999999999998  68999999752111  12235666778988888888888999999988876432


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      . ...+..+++.-.-...++++++..+ .+.|+.+||..+-..+.                =.|-..|...|+-+-++.=
T Consensus        97 k-aGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sSr----------------FlY~k~KGEvE~~v~eL~F  158 (238)
T KOG4039|consen   97 K-AGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSSR----------------FLYMKMKGEVERDVIELDF  158 (238)
T ss_pred             c-cccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCcccc----------------eeeeeccchhhhhhhhccc
Confidence            1 2234455666555667778887764 78999999976543221                1288889888887776531


Q ss_pred             cCCCeEEEecCceecCCCCc-hhHHHHHH
Q 027007          159 EGLPIVPVYPGVIYGPGKLT-TGNLVAKL  186 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~~~~-~~~~~~~~  186 (229)
                        -+++++|||.+.+..+.. .+.|..+.
T Consensus       159 --~~~~i~RPG~ll~~R~esr~geflg~~  185 (238)
T KOG4039|consen  159 --KHIIILRPGPLLGERTESRQGEFLGNL  185 (238)
T ss_pred             --cEEEEecCcceecccccccccchhhhe
Confidence              248999999999976532 34444443

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.22  E-value=1.4e-10  Score=89.97  Aligned_cols=165  Identities=22%  Similarity=0.211  Sum_probs=114.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCe-EEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHS-VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~   77 (229)
                      +|||||+-|.+|..++..|..+ |.+ |++.+-.... +....  .-.++..|+.|...+++++-  ++|.+||-.+...
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~~--~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS  122 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVTD--VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS  122 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhcc--cCCchhhhhhccccHHHhhcccccceeeeHHHHHH
Confidence            7999999999999999988765 544 5555443221 11111  23578899999999999864  5999999877522


Q ss_pred             -CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           78 -PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        78 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                       ..+.+......+|+.|.-|+++.++++. . ++..-|+..++|+.+....  ++-....-+...||.||..+|.+-..+
T Consensus       123 AvGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAFGPtSPRNP--TPdltIQRPRTIYGVSKVHAEL~GEy~  198 (366)
T KOG2774|consen  123 AVGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAFGPTSPRNP--TPDLTIQRPRTIYGVSKVHAELLGEYF  198 (366)
T ss_pred             HhcccCCceeeeecchhhhHHHHHHHHcC-e-eEeecccccccCCCCCCCC--CCCeeeecCceeechhHHHHHHHHHHH
Confidence             1233444568899999999999999884 2 5555688889987542211  111111123466999999999888776


Q ss_pred             H-hcCCCeEEEecCceec
Q 027007          157 A-SEGLPIVPVYPGVIYG  173 (229)
Q Consensus       157 ~-~~gi~~~~irpg~i~g  173 (229)
                      . +.|+++-++|...+..
T Consensus       199 ~hrFg~dfr~~rfPg~is  216 (366)
T KOG2774|consen  199 NHRFGVDFRSMRFPGIIS  216 (366)
T ss_pred             HhhcCccceecccCcccc
Confidence            4 5699999998555544

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.21  E-value=4.1e-11  Score=93.75  Aligned_cols=169  Identities=21%  Similarity=0.281  Sum_probs=118.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-----eEEEEEcCCCCCCCC--------CC-CCCeEEEEccCCChhhHHhhcC----
Q 027007            3 ILVSGASGYLGGRLCHALLKQGH-----SVRALVRRTSDISGL--------PS-EGALELVYGDVTDYRSLVDACF----   64 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~-----~V~~~~r~~~~~~~~--------~~-~~~~~~~~~D~~~~~~~~~~~~----   64 (229)
                      +||||+++++|.+|+.+|++...     .+++++|+.++.++.        ++ ...+++++.|+++-.++.++.+    
T Consensus         6 alITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~   85 (341)
T KOG1478|consen    6 ALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQ   85 (341)
T ss_pred             EEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHH
Confidence            69999999999999999998753     477788987765542        11 2368899999999888766654    


Q ss_pred             ---CccEEEEeCcccC-----------------------C----------CCCCchhhhHhhHHHHHHHHHHHHhcC---
Q 027007           65 ---GCHVIFHTAALVE-----------------------P----------WLPDPSRFFAVNVEGLKNVVQAAKETK---  105 (229)
Q Consensus        65 ---~~d~vi~~a~~~~-----------------------~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---  105 (229)
                         +.|.|+-|||..+                       +          +.++..+.|++|+.|.+.+++.+.+..   
T Consensus        86 rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~  165 (341)
T KOG1478|consen   86 RFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHS  165 (341)
T ss_pred             HhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcC
Confidence               5899999998510                       0          234567789999999999999887652   


Q ss_pred             CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       106 ~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                      ....+|.+||..+-...- ...|-.....    -.+|..||.+.+-+.....    +.|+.-.++.||...+...
T Consensus       166 ~~~~lvwtSS~~a~kk~l-sleD~q~~kg----~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~  235 (341)
T KOG1478|consen  166 DNPQLVWTSSRMARKKNL-SLEDFQHSKG----KEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSF  235 (341)
T ss_pred             CCCeEEEEeecccccccC-CHHHHhhhcC----CCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchh
Confidence            223899999875432211 1111111111    2459999998887765544    3467788999998876543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.19  E-value=6.6e-11  Score=92.35  Aligned_cols=145  Identities=22%  Similarity=0.276  Sum_probs=107.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCCCC------CCeEEEEccCCChhhHHhhcC--CccEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSE------GALELVYGDVTDYRSLVDACF--GCHVI   69 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~------~~~~~~~~D~~~~~~~~~~~~--~~d~v   69 (229)
                      .||||-||.=|+.|++.|+.+|++|-++.|+.+.+.     .+-.+      .......+|++|...+.+++.  +++-|
T Consensus        31 ALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEi  110 (376)
T KOG1372|consen   31 ALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEV  110 (376)
T ss_pred             EEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhh
Confidence            589999999999999999999999999999765433     22221      245678999999999988876  57889


Q ss_pred             EEeCcccC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCC--ceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           70 FHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        70 i~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      +|+|+-..  -+.+-++-.-++...||.+|+++++...-.  -||-..||+-.||.....+-.|.+|.-   +.++|+.+
T Consensus       111 YnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy---PRSPYa~a  187 (376)
T KOG1372|consen  111 YNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY---PRSPYAAA  187 (376)
T ss_pred             hhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC---CCChhHHh
Confidence            99998521  122334445678889999999998776321  278888999899876655555555433   25779999


Q ss_pred             HHHHH
Q 027007          146 KAVAD  150 (229)
Q Consensus       146 K~~~e  150 (229)
                      |..+-
T Consensus       188 Kmy~~  192 (376)
T KOG1372|consen  188 KMYGY  192 (376)
T ss_pred             hhhhe
Confidence            97554

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.17  E-value=4.2e-10  Score=93.33  Aligned_cols=168  Identities=14%  Similarity=0.042  Sum_probs=110.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ||.|+|++|.||+.++..|+.++  .++++++++..+.+  ++... .......+.+|+.++.+.++++|+||++||...
T Consensus        10 KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~-~~~~~v~~~td~~~~~~~l~gaDvVVitaG~~~   88 (321)
T PTZ00325         10 KVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHI-DTPAKVTGYADGELWEKALRGADLVLICAGVPR   88 (321)
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhc-CcCceEEEecCCCchHHHhCCCCEEEECCCCCC
Confidence            79999999999999999998655  68999998432221  11110 112234466676666678899999999999854


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc---ccCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---IADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~---~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      ....++...+..|+..+.++++++.+++ .+++|+++|.-+-.-..-.   ......+ ++   ...||.+-.-.-++..
T Consensus        89 ~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg~-p~---~~viG~g~LDs~R~r~  163 (321)
T PTZ00325         89 KPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGVY-DP---RKLFGVTTLDVVRARK  163 (321)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccCC-Ch---hheeechhHHHHHHHH
Confidence            4445678899999999999999999985 6789988885332211100   0011111 11   1336665455555555


Q ss_pred             HHHhc-CCCeEEEecCceecCCC
Q 027007          155 QAASE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       155 ~~~~~-gi~~~~irpg~i~g~~~  176 (229)
                      ..+++ |+...-|+ +.++|...
T Consensus       164 ~la~~l~v~~~~V~-~~VlGeHG  185 (321)
T PTZ00325        164 FVAEALGMNPYDVN-VPVVGGHS  185 (321)
T ss_pred             HHHHHhCcChhheE-EEEEeecC
Confidence            55544 77776776 78888654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.10  E-value=2.6e-10  Score=86.93  Aligned_cols=96  Identities=17%  Similarity=0.171  Sum_probs=71.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcCC-------ccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~v   69 (229)
                      |+++||||+|++|. +++.|+++|++|++++|++++.+.    +.....+.++.+|++|.+++.++++.       +|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            89999999987765 999999999999999998654332    11123678889999999998877653       5566


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCc----eEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE----KIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~iv~~s  114 (229)
                      |+..                ...++.++.++|.+.+ .+    +++|+=
T Consensus        80 v~~v----------------h~~~~~~~~~~~~~~g-v~~~~~~~~h~~  111 (177)
T PRK08309         80 VAWI----------------HSSAKDALSVVCRELD-GSSETYRLFHVL  111 (177)
T ss_pred             EEec----------------cccchhhHHHHHHHHc-cCCCCceEEEEe
Confidence            6443                2346788899998875 45    788864

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.10  E-value=2.2e-09  Score=90.15  Aligned_cols=74  Identities=16%  Similarity=0.106  Sum_probs=55.7

Q ss_pred             EEEEEcCCChHHHH--HHHHHHHCCCeEEEEEcCCCCC---------------CCC-CC-CCCeEEEEccCCChhhHHhh
Q 027007            2 KILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDI---------------SGL-PS-EGALELVYGDVTDYRSLVDA   62 (229)
Q Consensus         2 ~vlItGg~G~iG~~--l~~~l~~~g~~V~~~~r~~~~~---------------~~~-~~-~~~~~~~~~D~~~~~~~~~~   62 (229)
                      ++||||+++++|.+  ++++| +.|++|+++++..+..               ... .. ...+..+.+|+++.+++.++
T Consensus        43 ~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~l  121 (398)
T PRK13656         43 KVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKV  121 (398)
T ss_pred             EEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            68999999999999  89999 9999998888532111               111 11 12456789999999887666


Q ss_pred             cC-------CccEEEEeCccc
Q 027007           63 CF-------GCHVIFHTAALV   76 (229)
Q Consensus        63 ~~-------~~d~vi~~a~~~   76 (229)
                      ++       ++|+|||+++..
T Consensus       122 ie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        122 IELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHhcCCCCEEEECCccC
Confidence            53       589999999874

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.09  E-value=1.6e-09  Score=90.43  Aligned_cols=115  Identities=17%  Similarity=0.135  Sum_probs=81.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCCCC--CCCCCCC--CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSD--ISGLPSE--GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-------~~V~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      +||+|||++|++|++++..|+..+       .+|+++++++..  ++.....  ........|+....++.+.++++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            489999999999999999999854       589999996531  2211100  00001123554456777788999999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS  115 (229)
                      ||+||.......+..+.++.|+.-...+.+.+.++. ....+|.+|.
T Consensus        83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999998655445567899999999999999888874 2345555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=99.04  E-value=2.9e-09  Score=88.46  Aligned_cols=168  Identities=14%  Similarity=0.059  Sum_probs=111.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ||.|+|++|.||+.++..|+.++  .++.++++++.+.+  ++... .......++++.+++.+.++++|+|||+||...
T Consensus        20 KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~-~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~   98 (323)
T PLN00106         20 KVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHI-NTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR   98 (323)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhC-CcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence            79999999999999999999766  48999998762211  11110 111123355556677788999999999999865


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC--CcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--GYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~--~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                      ....++++.+..|...+.++.+.+.++. +.++|+++|-=+-+..+  ..........+   +...||.++...+++...
T Consensus        99 ~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~p---~~~viG~~~LDs~Rl~~~  174 (323)
T PLN00106         99 KPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVYD---PKKLFGVTTLDVVRANTF  174 (323)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCCC---cceEEEEecchHHHHHHH
Confidence            4445688899999999999999999996 56777777642211000  00000111111   124477778888888777


Q ss_pred             HHhc-CCCeEEEecCceecCC
Q 027007          156 AASE-GLPIVPVYPGVIYGPG  175 (229)
Q Consensus       156 ~~~~-gi~~~~irpg~i~g~~  175 (229)
                      ++++ |++...| -+.++|..
T Consensus       175 lA~~lgv~~~~V-~~~ViGeH  194 (323)
T PLN00106        175 VAEKKGLDPADV-DVPVVGGH  194 (323)
T ss_pred             HHHHhCCChhhe-EEEEEEeC
Confidence            7754 7776666 34555543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=99.01  E-value=3.1e-09  Score=84.44  Aligned_cols=75  Identities=25%  Similarity=0.408  Sum_probs=55.1

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhh
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDA   62 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~   62 (229)
                      |+||||+|                ||++|++++++|+++|++|++++|+..... .. ..+++++.++-.+  .+.+.+.
T Consensus         1 ~~vliT~G~T~e~iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~-~~~v~~i~v~s~~~m~~~l~~~   78 (229)
T PRK06732          1 MKILITSGGTTEPIDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EP-HPNLSIIEIENVDDLLETLEPL   78 (229)
T ss_pred             CEEEEcCCCcccccCCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CC-CCCeEEEEEecHHHHHHHHHHH
Confidence            88999987                789999999999999999999987643211 11 1256666644322  2456666


Q ss_pred             cCCccEEEEeCcccC
Q 027007           63 CFGCHVIFHTAALVE   77 (229)
Q Consensus        63 ~~~~d~vi~~a~~~~   77 (229)
                      ++++|+|||+||+.+
T Consensus        79 ~~~~DivIh~AAvsd   93 (229)
T PRK06732         79 VKDHDVLIHSMAVSD   93 (229)
T ss_pred             hcCCCEEEeCCccCC
Confidence            778999999999854

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.94  E-value=2.6e-09  Score=90.01  Aligned_cols=74  Identities=28%  Similarity=0.376  Sum_probs=65.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|||.|+ |+||+.+++.|+++| .+|++.+|+.+++..+...  ++++..+.|+.|.+.+.+++++.|+|||++.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            68999997 999999999999999 9999999998766654332  37889999999999999999999999999864

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.90  E-value=5.9e-09  Score=80.67  Aligned_cols=152  Identities=18%  Similarity=0.153  Sum_probs=105.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   82 (229)
                      .++.|+.||.|+++++...+.++.|..+.|+..+.........+.++++|.-...-+...+..+..++-+++-.    ..
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----gn  130 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----GN  130 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCc----cc
Confidence            57889999999999999999999999999985421111111366777777766555555556666666666532    22


Q ss_pred             chhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcCCC
Q 027007           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (229)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~  162 (229)
                      ...+..+|-....+..+++.+++ .++|+|+|-.. ++-.+ . .           ...|-.+|..+|......  ++.+
T Consensus       131 ~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~~-~-i-----------~rGY~~gKR~AE~Ell~~--~~~r  193 (283)
T KOG4288|consen  131 IILMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLPP-L-I-----------PRGYIEGKREAEAELLKK--FRFR  193 (283)
T ss_pred             hHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCCC-c-c-----------chhhhccchHHHHHHHHh--cCCC
Confidence            23455677777777788888885 78999998532 22111 1 1           235999999988776653  4577


Q ss_pred             eEEEecCceecCC
Q 027007          163 IVPVYPGVIYGPG  175 (229)
Q Consensus       163 ~~~irpg~i~g~~  175 (229)
                      -+++|||++||..
T Consensus       194 giilRPGFiyg~R  206 (283)
T KOG4288|consen  194 GIILRPGFIYGTR  206 (283)
T ss_pred             ceeeccceeeccc
Confidence            8999999999974

>PRK09620 hypothetical protein; Provisional

Probab=98.88  E-value=7.9e-09  Score=81.91  Aligned_cols=78  Identities=15%  Similarity=0.166  Sum_probs=55.6

Q ss_pred             CEEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-CCCCCCeEEEEccCCChhhHHhhc
Q 027007            1 MKILVSGAS----------------GYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         1 m~vlItGg~----------------G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++||||+|.                ||+|++++++|+++|++|+++++....... ......+..+..|....+.+.+++
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~   83 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSII   83 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHh
Confidence            589999986                999999999999999999999874321111 111123344566443446777777


Q ss_pred             C--CccEEEEeCcccCC
Q 027007           64 F--GCHVIFHTAALVEP   78 (229)
Q Consensus        64 ~--~~d~vi~~a~~~~~   78 (229)
                      .  ++|+|||+|+..+.
T Consensus        84 ~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         84 THEKVDAVIMAAAGSDW  100 (229)
T ss_pred             cccCCCEEEECccccce
Confidence            4  68999999998543

>PRK05086 malate dehydrogenase; Provisional

Probab=98.88  E-value=3.3e-08  Score=82.10  Aligned_cols=112  Identities=23%  Similarity=0.182  Sum_probs=78.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCCCCC---CCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDI---SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||+|+|++|.+|++++..|..   .++++++++|++...   -++........+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            8999999999999999988854   346889888874321   01111011112222  223455566788999999999


Q ss_pred             ccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .......+....+..|......+++.+.++. .+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcc
Confidence            8544434566789999999999999999985 567766665

>cd00704 MDH Malate dehydrogenase

Probab=98.82  E-value=6.4e-08  Score=80.65  Aligned_cols=104  Identities=15%  Similarity=0.140  Sum_probs=78.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCC--CCCCCCCCCCCeEEEEccCCCh-----------hhHHh
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-------HSVRALVRRT--SDISGLPSEGALELVYGDVTDY-----------RSLVD   61 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~D~~~~-----------~~~~~   61 (229)
                      ||.|+|++|.+|+.++..|+..|       +++.++++++  +..+         ....|+.|.           .+..+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------GVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------eeeeehhhhcccccCCcEEecChHH
Confidence            79999999999999999998865       2599999876  3221         223333332           34456


Q ss_pred             hcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEc
Q 027007           62 ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTS  114 (229)
Q Consensus        62 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~s  114 (229)
                      .++++|+|||+||.......+..+.+..|+.-...+.+.+.++. +...++.+|
T Consensus        73 ~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          73 AFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            77899999999998655445667889999999999999999883 444666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.81  E-value=4.5e-08  Score=81.53  Aligned_cols=169  Identities=14%  Similarity=0.063  Sum_probs=108.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCC--CCCCCC--CCCeEEEE--ccCCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD--ISGLPS--EGALELVY--GDVTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~~~~~--~~~~~~~~--~D~~~~~~~~~~~~~~d   67 (229)
                      +||.|+|++|.+|+.++..|+..|.       ++++++.++..  +.....  ........  ..++  .+-.+.++++|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCCC
Confidence            5899999999999999999998874       79999985432  221110  00000000  0111  11234568999


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      +||.+||.......+..+.++.|+.-...+.+.+.++.. ...++.+|.-.-...  ........-.+   ....|+.++
T Consensus        81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t--~~~~k~sg~~p---~~~ViG~t~  155 (322)
T cd01338          81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA--LIAMKNAPDIP---PDNFTAMTR  155 (322)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH--HHHHHHcCCCC---hHheEEehH
Confidence            999999985444455667899999999999999998863 446666653110000  00000010011   123588899


Q ss_pred             HHHHHHHHHHHhc-CCCeEEEecCceecCCC
Q 027007          147 AVADKIALQAASE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       147 ~~~e~~~~~~~~~-gi~~~~irpg~i~g~~~  176 (229)
                      ...+++...+++. |++...++..++||+..
T Consensus       156 LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         156 LDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             HHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            9999999888855 89999999889999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.75  E-value=1.5e-07  Score=78.45  Aligned_cols=106  Identities=18%  Similarity=0.131  Sum_probs=77.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCCCCCCCCCCCeEEEEccCCChh-----------hHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLPSEGALELVYGDVTDYR-----------SLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~~~   63 (229)
                      ||.|+|++|.+|+.++..|...+.       +++++++++...       ..+....|+.|..           +..+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            689999999999999999988552       699999865321       0112233444433           334667


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTS  114 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~s  114 (229)
                      +++|+||++||......+++.+.+..|+.-...+.+.+.++. +...++.+|
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            899999999998544345678899999999999999999883 444566555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.67  E-value=3.6e-08  Score=72.43  Aligned_cols=108  Identities=18%  Similarity=0.212  Sum_probs=76.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCC-------CCCCeE-EEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP-------SEGALE-LVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-------~~~~~~-~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|++|.+|++++..|...+  .++.++++++++.+...       ...... .+..  .++    +.++++|+||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~----~~~~~aDivv   74 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDY----EALKDADIVV   74 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSG----GGGTTESEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccc----cccccccEEE
Confidence            899999999999999999999987  58999999854322110       001111 1111  223    3457899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+..+.++.|..-...+.+.+.++.+...++.+|
T Consensus        75 itag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   75 ITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             ETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99997544335567789999999999999999886444565554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.61  E-value=1.2e-07  Score=75.23  Aligned_cols=83  Identities=14%  Similarity=0.183  Sum_probs=53.8

Q ss_pred             CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-------CCccEEEEeCcccCC---
Q 027007            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTAALVEP---   78 (229)
Q Consensus         9 ~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~~a~~~~~---   78 (229)
                      +|+||++++++|+++|++|+++++... ....      ....+|+.+.+++.+++       .++|++|||||+.+.   
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~~------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~   96 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKRA-LKPE------PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPV   96 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChhh-cccc------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccch
Confidence            789999999999999999999876421 1111      01357888877765443       468999999997432   


Q ss_pred             CCCCchhhhHhhHHHHHHHH
Q 027007           79 WLPDPSRFFAVNVEGLKNVV   98 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~   98 (229)
                      ...+.+++.+++..+++.+.
T Consensus        97 ~~~s~e~~~~~~~~~~~~~~  116 (227)
T TIGR02114        97 YMTDLEQVQASDNLNEFLSK  116 (227)
T ss_pred             hhCCHHHHhhhcchhhhhcc
Confidence            11223344445555544444

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.56  E-value=7.5e-08  Score=74.66  Aligned_cols=74  Identities=20%  Similarity=0.203  Sum_probs=59.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ++++|+||+|++|+.+++.|++.|++|++++|+.++.+.+..    ........+|..+.+++.++++++|+||++.+
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~  106 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA  106 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence            479999999999999999999999999999998654333211    11344556788899999899999999998765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.54  E-value=7.7e-08  Score=82.43  Aligned_cols=72  Identities=32%  Similarity=0.444  Sum_probs=57.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-C-eEEEEEcCCCCCCCCC---CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            3 ILVSGASGYLGGRLCHALLKQG-H-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g-~-~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|.|+ |++|+.+++.|++++ . +|++.+|+.++++.+.   ...++..++.|+.|.+++.++++++|+||||+++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            789999 999999999999987 4 8999999987644432   2358899999999999999999999999999986

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.50  E-value=1.3e-06  Score=72.59  Aligned_cols=114  Identities=19%  Similarity=0.214  Sum_probs=75.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCC--CCCCCCCCC--CC--eEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRT--SDISGLPSE--GA--LELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~--~~~~~~~~~--~~--~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |||.|+|++|.+|+.++..|+..|+  +|++++|+.  +++......  ..  ......+++-..+.. .++++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCCCCEEEEe
Confidence            8999999999999999999999985  599999954  332211100  00  000001121111222 37899999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      +|.......+..+.++.|+.-...+++.+.++.....+|.+++
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9975433334456789999999999998888764446666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.50  E-value=5e-07  Score=77.32  Aligned_cols=71  Identities=21%  Similarity=0.362  Sum_probs=55.4

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-   63 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-   63 (229)
                      +++|||||                +|.+|.+++++|.++|++|++++++.+ .+ .+  ..  ....|+++.+++.+++ 
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-~~--~~--~~~~dv~~~~~~~~~v~  262 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-TP--AG--VKRIDVESAQEMLDAVL  262 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-CC--CC--cEEEccCCHHHHHHHHH
Confidence            47999999                888999999999999999999998753 21 11  12  3457999988876654 


Q ss_pred             ---CCccEEEEeCcccC
Q 027007           64 ---FGCHVIFHTAALVE   77 (229)
Q Consensus        64 ---~~~d~vi~~a~~~~   77 (229)
                         .++|++||+||+.+
T Consensus       263 ~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        263 AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HhcCCCCEEEEcccccc
Confidence               46899999999854

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.44  E-value=2.2e-06  Score=70.93  Aligned_cols=111  Identities=20%  Similarity=0.185  Sum_probs=78.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|+|++|.+|++++..|+.++  .++++++.+  +.+.    +... .... +.+ ....+++.+.++++|+||-+|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~-i~~-~~~~~~~y~~~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAK-VTG-YLGPEELKKALKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcce-EEE-ecCCCchHHhcCCCCEEEEeC
Confidence            899999999999999999999888  589999987  2221    1111 0011 111 101223456678999999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |.......+..+.++.|..-...+.+.+.++.+...++.+|.
T Consensus        77 G~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          77 GVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            985444455677899999999999999998865456666654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.38  E-value=1.4e-06  Score=70.20  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      |+|||+||||. |+.++++|.++|++|++..++....+.+...+ ...+..+..|.+++.+.++  ++|+||+++.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g-~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ-ALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccC-CceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            89999999999 99999999999999999999876555444322 2334556678888877776  48999999754

This enzyme was found to be a monomer by gel filtration.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.36  E-value=5.5e-07  Score=75.15  Aligned_cols=71  Identities=24%  Similarity=0.382  Sum_probs=52.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-C-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-G-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      ++|+||||+|+||+.++++|+++ | .+++++.|+..++..+..    ++..+|+.   ++.+++.++|+|||+++....
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~----el~~~~i~---~l~~~l~~aDiVv~~ts~~~~  228 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA----ELGGGKIL---SLEEALPEADIVVWVASMPKG  228 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH----HhccccHH---hHHHHHccCCEEEECCcCCcC
Confidence            37999999999999999999865 5 689999998665544432    11123443   466778899999999986443

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.33  E-value=6.3e-05  Score=55.64  Aligned_cols=157  Identities=18%  Similarity=0.178  Sum_probs=93.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhh---H----HhhcC--CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---L----VDACF--GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~----~~~~~--~~d~vi~~   72 (229)
                      ||+|.||-|-+|+++++.+..++|-|.-++-.+....+.     -..+..|-.-.|.   +    -+.++  ++|.|+.-
T Consensus         5 rVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~-----sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV   79 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS-----SILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV   79 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc-----eEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence            799999999999999999999999998887764332211     1123333322222   2    22222  48999988


Q ss_pred             Cccc-CCCCC------CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc-ceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALV-EPWLP------DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS-FFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~-~~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||-. .....      +.+.+++-.+....--.+.+..+.+.+.++.+.. -.+.++.++..              .|+.
T Consensus        80 AGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMI--------------GYGM  145 (236)
T KOG4022|consen   80 AGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMI--------------GYGM  145 (236)
T ss_pred             eccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCccc--------------chhH
Confidence            8752 22111      1222232223222222333344444555555544 34555555443              4999


Q ss_pred             HHHHHHHHHHHHHhc--CCC----eEEEecCceecCCCC
Q 027007          145 SKAVADKIALQAASE--GLP----IVPVYPGVIYGPGKL  177 (229)
Q Consensus       145 sK~~~e~~~~~~~~~--gi~----~~~irpg~i~g~~~~  177 (229)
                      +|++...+.+.++..  |++    +..|.|-...+|+.+
T Consensus       146 AKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR  184 (236)
T KOG4022|consen  146 AKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR  184 (236)
T ss_pred             HHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc
Confidence            999999999888632  444    677888888888753

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.32  E-value=3e-06  Score=70.41  Aligned_cols=106  Identities=18%  Similarity=0.266  Sum_probs=76.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCCC---------CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      +||.|.|+ |.+|+.++..|+..|  ++++++++++++.+.+...         ..... ..  .+.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~~--~~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKI-KA--GDYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-Ec--CCHH----HhCCCCEE
Confidence            58999995 999999999999999  6899999987654432211         11111 11  2232    25789999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |+++|.......+..+.+..|..-...+.+.+.++.....++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999997544444556789999999999999999886545666665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.26  E-value=1e-05  Score=67.55  Aligned_cols=114  Identities=14%  Similarity=0.120  Sum_probs=75.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCC--CCCCCCCC--CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRT--SDISGLPS--EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      +||.|+|++|++|++++..|...+.       ++++++.++  ++++....  .........+..-..+-.+.++++|+|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDvV   83 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDAA   83 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCEE
Confidence            4899999999999999999998873       799999864  22221100  000000000100001223456889999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~s  114 (229)
                      |.+||.......+..+.+..|+.-...+.+.+.++.. ...++.+|
T Consensus        84 VitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        84 LLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9999985444456678899999999999999999864 34555554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.25  E-value=6.1e-06  Score=68.73  Aligned_cols=106  Identities=17%  Similarity=0.215  Sum_probs=75.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCC----CC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~----~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      +||.|+|+ |.+|++++..|+..|.  ++.+++++.++++..    ..    ...+... .  .+.    +.++++|+||
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~----~~~~~adivI   78 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY----SDCKDADLVV   78 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH----HHhCCCCEEE
Confidence            48999997 9999999999999985  899999977643321    10    0122222 1  122    3368999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+..+.+..|..-...+++.+.++.....++.+|
T Consensus        79 itag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         79 ITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99998544444566789999999999999998886444666655

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.24  E-value=1.2e-06  Score=72.20  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=56.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCC---CCCCCCC----C-CCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRT---SDISGLP----S-EGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~---~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      +++|+|+ |++|++++..|++.|++ |++++|+.   ++.+++.    . ...+.....|+++.+++.+.++.+|+|||+
T Consensus       128 ~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINa  206 (289)
T PRK12548        128 KLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNA  206 (289)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEe
Confidence            6899998 79999999999999986 99999986   3332221    1 123445678998888888888889999998


Q ss_pred             Ccc
Q 027007           73 AAL   75 (229)
Q Consensus        73 a~~   75 (229)
                      ...
T Consensus       207 Tp~  209 (289)
T PRK12548        207 TLV  209 (289)
T ss_pred             CCC
Confidence            765

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=98.24  E-value=1.6e-05  Score=65.54  Aligned_cols=108  Identities=21%  Similarity=0.272  Sum_probs=76.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCC----CCC----CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~----~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |+||++++..|+.++  .++++++..++..+..    ...    ..-..+.+| .+    .+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            79999999 999999999998776  4899999985543321    110    011122222 12    34468899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||....+-.+-.+.++.|..-...+.+.+.++.....++.+|
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            99998655445567789999999999999999886534555544

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.20  E-value=1.6e-05  Score=65.98  Aligned_cols=112  Identities=21%  Similarity=0.129  Sum_probs=76.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC--CCCCC-CeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG--LPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~--~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ||.|+|++|.+|++++..|+.++.  +++++|+++...+.  +.... ...+....  +.+++.+.++++|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            689999999999999999988874  79999987622111  11100 01111100  1123456789999999999975


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .....+..+.+..|..-...+.+.+.++.+...++.+|.
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            444445667899999999999999988865446666654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.19  E-value=4.2e-06  Score=66.38  Aligned_cols=73  Identities=27%  Similarity=0.421  Sum_probs=62.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-CCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      |+++|.| .|-+|+.+++.|.+.|++|+++++++++... +.....++.+.+|-+|++.++++ ++++|++|-..+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            8899998 5999999999999999999999999877655 33234678899999999999998 678999986654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.16  E-value=7.2e-06  Score=70.02  Aligned_cols=97  Identities=14%  Similarity=0.214  Sum_probs=66.6

Q ss_pred             EEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH-Hhhc-
Q 027007            2 KILVSGAS----------------GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-VDAC-   63 (229)
Q Consensus         2 ~vlItGg~----------------G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~-   63 (229)
                      ++|||||.                |.+|.+++++|..+|++|+++.++....  .+.  .  ....|+++.+++ .+++ 
T Consensus       187 ~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~~~--~--~~~~~v~~~~~~~~~~~~  260 (390)
T TIGR00521       187 RVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--TPP--G--VKSIKVSTAEEMLEAALN  260 (390)
T ss_pred             eEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--CCC--C--cEEEEeccHHHHHHHHHH
Confidence            68999993                4699999999999999999988765321  111  2  245788888877 4333 


Q ss_pred             ---CCccEEEEeCcccCCCC-----C---CchhhhHhhHHHHHHHHHHHHhc
Q 027007           64 ---FGCHVIFHTAALVEPWL-----P---DPSRFFAVNVEGLKNVVQAAKET  104 (229)
Q Consensus        64 ---~~~d~vi~~a~~~~~~~-----~---~~~~~~~~n~~~~~~l~~~~~~~  104 (229)
                         .+.|++|++||+.+...     .   .....+..|+.-+..+++.+.+.
T Consensus       261 ~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       261 ELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             hhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence               46899999999854311     1   11123456677777777777654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=98.15  E-value=1.5e-05  Score=66.26  Aligned_cols=106  Identities=21%  Similarity=0.306  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCCC----CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|.|+ |.+|..++..|+.+|  .+|+++++++++.+.    +...    .......   .|.    +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence            89999997 999999999999999  689999998764432    1110    1111111   122    2368999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .+++.......+..+.+..|+.....+++.+.++.....++.++
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99987443334556778999999999999988876444555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=98.13  E-value=4.7e-05  Score=63.62  Aligned_cols=112  Identities=16%  Similarity=0.106  Sum_probs=74.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCC--CCCCCCCC--CCe-EEE-EccCCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTS--DISGLPSE--GAL-ELV-YGDVTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~--~~~~~~~~--~~~-~~~-~~D~~~~~~~~~~~~~~d   67 (229)
                      +||.|+|++|.+|+.++..|...+.       ++.++|.++.  +++.....  ... .+. ...++  .+-.+.++++|
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~daD   82 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKDAD   82 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCCCC
Confidence            4899999999999999999988762       7999998542  22211100  000 000 00111  12234568899


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEc
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~s  114 (229)
                      +||-+||.......+..+.+..|..-...+.+.+.++.. ...++.+|
T Consensus        83 iVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         83 VALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999975544456678899999999999999998643 34566655

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.11  E-value=5e-06  Score=72.71  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=61.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+.....++++.+|.++.+.+.++ ++++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            89999996 99999999999999999999999877655543323678899999999999888 778998887753

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.11  E-value=2.5e-06  Score=70.31  Aligned_cols=75  Identities=17%  Similarity=0.263  Sum_probs=62.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCCCCCCCCCC---------CCCeEEEEccCCChhhHHhhcCCccE
Q 027007            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~d~   68 (229)
                      .++|.||+||-|..+++++.+    .|...-+..|++.++++...         .+...++.+|..|++++.+..+++.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            378999999999999999999    67889999999876554211         12233889999999999999999999


Q ss_pred             EEEeCccc
Q 027007           69 IFHTAALV   76 (229)
Q Consensus        69 vi~~a~~~   76 (229)
                      |+||+|+.
T Consensus        87 ivN~vGPy   94 (423)
T KOG2733|consen   87 IVNCVGPY   94 (423)
T ss_pred             EEeccccc
Confidence            99999973

>PTZ00117 malate dehydrogenase; Provisional

Probab=98.08  E-value=3.3e-05  Score=64.50  Aligned_cols=113  Identities=16%  Similarity=0.101  Sum_probs=75.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|+|+ |.+|+.++..++..| .++++++++++..+..    ............+....+.+ .++++|+||.+++.
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag~   83 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAGV   83 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCCC
Confidence            58999996 999999999999988 7899999987543321    00000000001111112333 56899999999987


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ......+..+.+..|..-...+.+.+.++.+...++++|.
T Consensus        84 ~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         84 QRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            5433344567888999888888888888864445676654

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=98.06  E-value=1.9e-05  Score=68.29  Aligned_cols=106  Identities=16%  Similarity=0.157  Sum_probs=76.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEEcCCCCCCCC----CCC-----CCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-------GH--SVRALVRRTSDISGL----PSE-----GALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-------g~--~V~~~~r~~~~~~~~----~~~-----~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ||.|+|++|.+|.+++..|+..       +.  ++++++++.++++..    ...     ..+. +..|  +.    +.+
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~~--~y----e~~  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGID--PY----EVF  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-EecC--CH----HHh
Confidence            7999999999999999999988       64  789999987654421    110     1111 1111  23    446


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHh-cCCCceEEEEc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE-TKTVEKIIYTS  114 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~iv~~s  114 (229)
                      +++|+||-+||.......+-.+.++.|..-...+.+.+.+ +.....+|.+|
T Consensus       175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            8899999999985444455677899999999999999988 55444666665

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.04  E-value=2.5e-05  Score=59.89  Aligned_cols=72  Identities=18%  Similarity=0.319  Sum_probs=46.1

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH----H
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~----~   60 (229)
                      ++||||+|                ||-.|.+|++++..+|++|+++..+.. .+   ....+..+.  +...++.    .
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---~p~~~~~i~--v~sa~em~~~~~   77 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP---PPPGVKVIR--VESAEEMLEAVK   77 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE---SSHHHHHHHHH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---ccccceEEE--ecchhhhhhhhc
Confidence            37888887                789999999999999999999988732 11   112566665  4455544    4


Q ss_pred             hhcCCccEEEEeCcccCC
Q 027007           61 DACFGCHVIFHTAALVEP   78 (229)
Q Consensus        61 ~~~~~~d~vi~~a~~~~~   78 (229)
                      +.+++.|++||+|++.+.
T Consensus        78 ~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   78 ELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHGGGGSEEEE-SB--SE
T ss_pred             cccCcceeEEEecchhhe
Confidence            445568999999998554

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=98.02  E-value=4.4e-05  Score=63.34  Aligned_cols=113  Identities=19%  Similarity=0.156  Sum_probs=73.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|.|+ |.+|..++..++.+|+ +|++++..++..+.    +............++-..++.+ ++++|+||-++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            78999995 9999999999999886 89999986542220    0000000000011111122333 5789999999986


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ......+..+.+..|+.-...+++.+.++.+...+|.+|.
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            4333334456788999999999999888764446666664

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=98.02  E-value=2.4e-05  Score=63.62  Aligned_cols=112  Identities=20%  Similarity=0.124  Sum_probs=76.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCCCCCCCCCCC--CCeEE-EEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            3 ILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSE--GALEL-VYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~--~~~~~-~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |.|+|++|.+|..++..|+..|    .+++++|+++++++.....  ..... ....++-..+..+.++++|+||-+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799998999999999999988    7999999987654431110  00000 011222223445667899999999987


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ......+-......|+.....+.+.+.++.+...++.+|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            544333445678889999999999998886444565554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.98  E-value=4.2e-05  Score=63.64  Aligned_cols=107  Identities=16%  Similarity=0.158  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCC----CC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~----~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|+.++..|+..|  .++++++.+.++.+..    ..    .....+...  .|+++    ++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~----~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV----TANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH----hCCCCEEE
Confidence            68999995 999999999998887  4799999876543211    10    011122211  13332    58999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+-...++.|..-...+.+.+.++.....++.+|
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            99997543334556789999999999999999886545666665

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.97  E-value=4.6e-05  Score=63.34  Aligned_cols=112  Identities=20%  Similarity=0.195  Sum_probs=72.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC----CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|+|+ |.+|..++..++..|. +|+++++++++.+...    ...........++...+. +.++++|+||.+++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~   80 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV   80 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence            68999998 9999999999998875 9999999765432210    000000000111111123 236899999999986


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ......+-.+.+..|+.-...+++.+.+......+|.++
T Consensus        81 p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         81 PRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            433333445677888888888888887775444566655

>PLN02602 lactate dehydrogenase

Probab=97.91  E-value=9.3e-05  Score=62.42  Aligned_cols=107  Identities=16%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCC----CC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~----~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      +||.|+|+ |.+|+.++..|+.++  .++++++.++++++..    ..    .... -+..+ .|.+    .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~----~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA----VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH----HhCCCCEEE
Confidence            38999995 999999999999887  4799999876543321    11    0111 22211 1232    268999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+-.+.+..|+.-...+.+.+.++.....++.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997543334556789999999999999998886555666666

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.85  E-value=5.1e-05  Score=62.16  Aligned_cols=162  Identities=13%  Similarity=0.036  Sum_probs=99.6

Q ss_pred             EEEEcC-CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhh-------cCCc------
Q 027007            3 ILVSGA-SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDA-------CFGC------   66 (229)
Q Consensus         3 vlItGg-~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~-------~~~~------   66 (229)
                      |+|.|. +--+++.++..|.++|+-|+++..+.++.+.++.+  ..++....|..++.++...       ++..      
T Consensus         6 VvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~   85 (299)
T PF08643_consen    6 VVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPG   85 (299)
T ss_pred             EEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCC
Confidence            678885 67899999999999999999999886543322221  2456666677555444332       3321      


Q ss_pred             --cEEEEeCcc---------cCC----CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEc-cceeeecCCCc
Q 027007           67 --HVIFHTAAL---------VEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTS-SFFALGSTDGY  125 (229)
Q Consensus        67 --d~vi~~a~~---------~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~s-S~~~~~~~~~~  125 (229)
                        .+..++.|+         .++    +.+.|...++.|+..++..++.+.+..+     ..++|.+. |...--..+..
T Consensus        86 ~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~Pfh  165 (299)
T PF08643_consen   86 APPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFH  165 (299)
T ss_pred             CCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCcc
Confidence              123333332         111    2235777789999999988888876532     23554443 43211111111


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecC
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~  174 (229)
                      .. |         ....+..+.+.+.+.+|+..++++|+.++.|++.=.
T Consensus       166 sp-E---------~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  166 SP-E---------SIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CH-H---------HHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            00 0         112455566888899999888999999999988443

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.81  E-value=9.1e-06  Score=66.51  Aligned_cols=74  Identities=19%  Similarity=0.259  Sum_probs=59.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      .++|.|++||.|.-++++|+++|.+-.+..|+..++..+...-+..+-..++-+++.+.+.+...++|+||+|+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGP   81 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGP   81 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccc
Confidence            47899999999999999999999999999999887664332212222233455588999999999999999997

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.79  E-value=0.00023  Score=59.91  Aligned_cols=70  Identities=26%  Similarity=0.334  Sum_probs=50.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----------------------------CCCCCCeEEEEcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----------------------------LPSEGALELVYGD   52 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~D   52 (229)
                      +|+|.| +|++|+++++.|+..|. +++++|++.-....                            +.+.-.++.+..|
T Consensus        26 ~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~  104 (338)
T PRK12475         26 HVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTD  104 (338)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEecc
Confidence            789999 58899999999999996 89999887411111                            1111234556667


Q ss_pred             CCChhhHHhhcCCccEEEEeC
Q 027007           53 VTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        53 ~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ++ .+.+.++++++|+||.+.
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~  124 (338)
T PRK12475        105 VT-VEELEELVKEVDLIIDAT  124 (338)
T ss_pred             CC-HHHHHHHhcCCCEEEEcC
Confidence            74 557778888999999875

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.79  E-value=0.00014  Score=60.83  Aligned_cols=108  Identities=19%  Similarity=0.225  Sum_probs=72.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC--C------CCC-CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG--L------PSE-GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~--~------~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      +||.|+| +|.+|+.++..++..|. +|++++.+++....  +      ... ...++..  .+|.    +.++++|+||
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~----~~l~~aDiVI   79 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY----EDIAGSDVVI   79 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH----HHhCCCCEEE
Confidence            4799999 59999999999999994 89999998764321  1      000 1112221  1223    3468999999


Q ss_pred             EeCcccCCCCC-----CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+++.......     +..+.+..|+.-...+.+.+.+..+...++++|.
T Consensus        80 ~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         80 VTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             ECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99987432222     3456788898888888888888764446666664

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.78  E-value=8.9e-05  Score=63.14  Aligned_cols=106  Identities=15%  Similarity=0.152  Sum_probs=71.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-e----EEE--E--EcCCCCCCCC----CC-----CCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-S----VRA--L--VRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~----V~~--~--~r~~~~~~~~----~~-----~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ||.|+|++|.+|++++..|+..+. .    +.+  +  +++.++++..    ..     ...+. +..|  +.    +.+
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~~--~y----~~~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGID--PY----EVF  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-EecC--CH----HHh
Confidence            799999999999999999998873 2    333  3  6555543321    10     01111 1111  22    446


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTS  114 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~s  114 (229)
                      +++|+||-+||.......+..+.+..|+.-...+.+.+.++. +..++|.+|
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            889999999998544445667789999999999999998864 333556555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.77  E-value=0.0008  Score=55.87  Aligned_cols=105  Identities=19%  Similarity=0.246  Sum_probs=73.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCC------CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS------EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      ||.|.|+ |.+|+.++..|+.++  .++++++.++++.+.    +..      ...+.+...   |.    +.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y----~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DY----DDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CH----HHhCCCCEE
Confidence            6889997 999999999999887  479999987654321    111      012233322   33    346899999


Q ss_pred             EEeCcccCCCCCC--chhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPD--PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+||.......+  -.+.+..|..-...+.+.+.++.....++.+|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999974332233  36789999999999999999886444555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.77  E-value=5.7e-05  Score=58.87  Aligned_cols=159  Identities=14%  Similarity=0.177  Sum_probs=91.4

Q ss_pred             EEEEcCCChHHHHHHH-----HHHHCC----CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            3 ILVSGASGYLGGRLCH-----ALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         3 vlItGg~G~iG~~l~~-----~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      .++-+++|+|+..|..     ++-+.+    |+|++++|.+.+.+.       ++-+.|..-   +   ...++..+|.+
T Consensus        15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri-------tw~el~~~G---i---p~sc~a~vna~   81 (315)
T KOG3019|consen   15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI-------TWPELDFPG---I---PISCVAGVNAV   81 (315)
T ss_pred             CCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc-------ccchhcCCC---C---ceehHHHHhhh
Confidence            4567889999988776     333334    899999998865332       111112111   0   01233333333


Q ss_pred             cc-----cCCCCCCch-hhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH-H
Q 027007           74 AL-----VEPWLPDPS-RFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER-S  145 (229)
Q Consensus        74 ~~-----~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-s  145 (229)
                      +-     ...|.+.++ +.....+..|..|+++...... .+.+|.++..+.|-++....++|+.+...      +.. +
T Consensus        82 g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg------fd~~s  155 (315)
T KOG3019|consen   82 GNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG------FDILS  155 (315)
T ss_pred             hhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC------hHHHH
Confidence            32     122323322 3445556677888888876643 34799999999998866555555544322      222 2


Q ss_pred             HH--HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH
Q 027007          146 KA--VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN  181 (229)
Q Consensus       146 K~--~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~  181 (229)
                      +.  ..|..++.-. ...++++||.|.+.|.+......
T Consensus       156 rL~l~WE~aA~~~~-~~~r~~~iR~GvVlG~gGGa~~~  192 (315)
T KOG3019|consen  156 RLCLEWEGAALKAN-KDVRVALIRIGVVLGKGGGALAM  192 (315)
T ss_pred             HHHHHHHHHhhccC-cceeEEEEEEeEEEecCCcchhh
Confidence            22  3344443332 34899999999999987644433

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.77  E-value=0.00012  Score=60.67  Aligned_cols=105  Identities=20%  Similarity=0.220  Sum_probs=72.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCC-------CC-CCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            3 ILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP-------SE-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-------~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |.|.|+ |.+|+.++..|+..|  .+++++++++++.+...       .. ...+....  .|.    +.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~----~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY----ADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH----HHhCCCCEEEEc
Confidence            457885 889999999999998  68999999876433211       10 11122211  122    356899999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +|.......+....+..|+.-...+.+.+.++.+...++.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            997543334556788999999999999999886444666655

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.74  E-value=2e-06  Score=62.69  Aligned_cols=68  Identities=21%  Similarity=0.291  Sum_probs=49.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCCCCCC---CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|+ |++|++++..|.+.|.+ |+++.|+.++.+.+...   ..+.++.     .+++.+.+.++|+||++.+.
T Consensus        14 ~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~-----~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   14 RVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP-----LEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE-----GGGHCHHHHTESEEEE-SST
T ss_pred             EEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee-----HHHHHHHHhhCCeEEEecCC
Confidence            7999995 99999999999999976 99999987665543221   1233332     34555677889999999764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.70  E-value=0.00043  Score=58.28  Aligned_cols=100  Identities=27%  Similarity=0.320  Sum_probs=64.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----------------------------CCCCCCeEEEEcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----------------------------LPSEGALELVYGD   52 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~D   52 (229)
                      +|+|.|+ |++|++++..|+..|. +++++|++.-....                            +.+.-.++.+..+
T Consensus        26 ~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~  104 (339)
T PRK07688         26 HVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQD  104 (339)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            7899995 9999999999999996 89999986411111                            1111234455566


Q ss_pred             CCChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee
Q 027007           53 VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (229)
Q Consensus        53 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~  120 (229)
                      ++ .+.+.++++++|+||.+..               |...-..+.++|.+.+  ..+|+.++...+|
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~~--iP~i~~~~~g~~G  154 (339)
T PRK07688        105 VT-AEELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKYG--IPWIYGACVGSYG  154 (339)
T ss_pred             CC-HHHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHhC--CCEEEEeeeeeee
Confidence            64 4566677788898887742               2223345667777764  3567766555444

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.67  E-value=0.00054  Score=55.04  Aligned_cols=113  Identities=19%  Similarity=0.114  Sum_probs=73.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCC--CCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRT--SDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ||.|.|++|+||+.|...|...-  .++.+.|-..  .-..++... .-.......+-.++++++++++|+||--||+..
T Consensus        30 KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI-~T~s~V~g~~g~~~L~~al~~advVvIPAGVPR  108 (345)
T KOG1494|consen   30 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI-NTNSSVVGFTGADGLENALKGADVVVIPAGVPR  108 (345)
T ss_pred             eEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc-CCCCceeccCChhHHHHHhcCCCEEEecCCCCC
Confidence            78999999999999988664332  2333333321  111111110 001112233446689999999999999999854


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+-=..+..|++|..-...|..++.+..+...+.++|.
T Consensus       109 KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  109 KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            33233567899999999999999999875456666653

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.63  E-value=0.00023  Score=50.17  Aligned_cols=69  Identities=25%  Similarity=0.401  Sum_probs=53.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+|.|. |-+|+.+++.|.+.+.+|++++++++..+.+... .+.++.+|.++++.++++ +++++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE-GVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-TSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-ccccccccchhhhHHhhcCccccCEEEEcc
Confidence            578885 7899999999999777999999987654443322 578999999999999886 45788888664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.63  E-value=0.001  Score=58.25  Aligned_cols=118  Identities=13%  Similarity=0.110  Sum_probs=68.5

Q ss_pred             EEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCCCch
Q 027007            5 VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPS   84 (229)
Q Consensus         5 ItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~   84 (229)
                      |+||+|.+|.++++.|...|.+|+...+...+......                     .+++.+++-+.-.    +..+
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---------------------~~~~~~~~d~~~~----~~~~   97 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG---------------------DRFGALVFDATGI----TDPA   97 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC---------------------CcccEEEEECCCC----CCHH
Confidence            88889999999999999999999987665432111100                     1222222221100    1111


Q ss_pred             hhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH----HHHHHHHhc
Q 027007           85 RFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD----KIALQAASE  159 (229)
Q Consensus        85 ~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e----~~~~~~~~~  159 (229)
                           .+.+....++.+.+.+ ..++||+++|.......                 ..|+.+|....    .+++++ ++
T Consensus        98 -----~l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~~-----------------~~~~~akaal~gl~rsla~E~-~~  154 (450)
T PRK08261         98 -----DLKALYEFFHPVLRSLAPCGRVVVLGRPPEAAAD-----------------PAAAAAQRALEGFTRSLGKEL-RR  154 (450)
T ss_pred             -----HHHHHHHHHHHHHHhccCCCEEEEEccccccCCc-----------------hHHHHHHHHHHHHHHHHHHHh-hc
Confidence                 1223334444444432 23599999987543211                 23888888444    455555 56


Q ss_pred             CCCeEEEecCc
Q 027007          160 GLPIVPVYPGV  170 (229)
Q Consensus       160 gi~~~~irpg~  170 (229)
                      +++++.+.|+.
T Consensus       155 gi~v~~i~~~~  165 (450)
T PRK08261        155 GATAQLVYVAP  165 (450)
T ss_pred             CCEEEEEecCC
Confidence            89999998875

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.58  E-value=0.00014  Score=62.05  Aligned_cols=73  Identities=21%  Similarity=0.299  Sum_probs=45.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      |||.|.||||++|+++++.|.++ +.+|..+.++...-+.+... ..+....|+.+.++++.. ++++|+|+-+.+
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp  113 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-FPHLITQDLPNLVAVKDADFSDVDAVFCCLP  113 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-CccccCccccceecCCHHHhcCCCEEEEcCC
Confidence            58999999999999999999998 68999988764433222110 111222344333333222 356777776653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.57  E-value=0.00021  Score=62.24  Aligned_cols=67  Identities=22%  Similarity=0.269  Sum_probs=47.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|+||+|.+|.++++.|.+.|++|++.+|+++.........++.       -..+..+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-------~~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-------YANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-------eccCHHHHhccCCEEEEecC
Confidence            89999999999999999999999999999999865432221111111       11233445677899988764

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.56  E-value=4e-05  Score=56.91  Aligned_cols=71  Identities=18%  Similarity=0.149  Sum_probs=47.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|+ |.+|+.+++.|.+.| ++|++.+|+.++.+..........+..+..+.   .+.++++|+||++...
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~   91 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPV   91 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCC
Confidence            47899996 999999999999986 78999999866544322110111112233333   3446889999999865

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.56  E-value=0.00032  Score=58.99  Aligned_cols=68  Identities=24%  Similarity=0.347  Sum_probs=43.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||+|.||||++|+++++.|.+++|   ++..+.++.+..+.+.-. .......|+.+. +    ++++|+||-+++
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~-g~~i~v~d~~~~-~----~~~vDvVf~A~g   72 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFK-GKELKVEDLTTF-D----FSGVDIALFSAG   72 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeC-CceeEEeeCCHH-H----HcCCCEEEECCC
Confidence            6899999999999999999999876   457777664433332211 223334455422 1    246777776654

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.50  E-value=0.00024  Score=62.14  Aligned_cols=68  Identities=25%  Similarity=0.313  Sum_probs=50.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CC----CCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DI----SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|+++ +|.++++.|+++|++|++.+++.. ..    +.+.. .+++++..|..+     +...++|+||++++.
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~d~vv~~~g~   78 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIELVLGEYPE-----EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEEEeCCcch-----hHhhcCCEEEECCCC
Confidence            3799999877 999999999999999999998742 22    11111 245677777765     234678999999986

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.49  E-value=0.0012  Score=47.25  Aligned_cols=87  Identities=18%  Similarity=0.232  Sum_probs=51.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-CCCeEEEE-EcCCCCCCC--CCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLK-QGHSVRAL-VRRTSDISG--LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~-~g~~V~~~-~r~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |||.|.|.+|-+|+.+++.+.+ .++++.+. +|+.+....  .....+..  ...+.-.+++++++..+|++|....  
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~--   76 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTN--   76 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCC--
Confidence            8999999999999999999999 67886555 555421111  00000000  1112223566777777999998752  


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcC
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (229)
                                    -......++.+.+++
T Consensus        77 --------------p~~~~~~~~~~~~~g   91 (124)
T PF01113_consen   77 --------------PDAVYDNLEYALKHG   91 (124)
T ss_dssp             --------------HHHHHHHHHHHHHHT
T ss_pred             --------------hHHhHHHHHHHHhCC
Confidence                          133556677777764

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.49  E-value=0.00081  Score=52.44  Aligned_cols=97  Identities=15%  Similarity=0.137  Sum_probs=61.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCC--------------------------CCCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~D~~   54 (229)
                      +|+|.| .|++|+++++.|+..|. +++++|++.-....+                          .+.-.++.+..++ 
T Consensus        23 ~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-  100 (202)
T TIGR02356        23 HVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-  100 (202)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-
Confidence            688998 79999999999999995 899998863211111                          1111233344444 


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                      +.+.+.+.++++|+||.+..       +        ...-..+.+.|.+++  ..+|+.++..
T Consensus       101 ~~~~~~~~~~~~D~Vi~~~d-------~--------~~~r~~l~~~~~~~~--ip~i~~~~~g  146 (202)
T TIGR02356       101 TAENLELLINNVDLVLDCTD-------N--------FATRYLINDACVALG--TPLISAAVVG  146 (202)
T ss_pred             CHHHHHHHHhCCCEEEECCC-------C--------HHHHHHHHHHHHHcC--CCEEEEEecc
Confidence            34567777889999998752       1        122234556676664  3566665443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.48  E-value=0.0005  Score=55.68  Aligned_cols=67  Identities=24%  Similarity=0.222  Sum_probs=46.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE-EcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|+|++|.+|+.+++.+.+. +.+++.+ ++++++.... .       ..++...+++.++++++|+||.++.+
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~-------~~~i~~~~dl~~ll~~~DvVid~t~p   70 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-G-------ALGVAITDDLEAVLADADVLIDFTTP   70 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-C-------CCCccccCCHHHhccCCCEEEECCCH
Confidence            79999999999999999988764 6887764 4444333221 1       22444455666666789999988753

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.48  E-value=0.00043  Score=57.38  Aligned_cols=105  Identities=21%  Similarity=0.215  Sum_probs=69.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCC----C-CCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS----E-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~----~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |.|+|+ |.+|..++..|+..|. +|++++++++....    +..    . ...+ +... +|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CC---H-HHhCCCCEEEEe
Confidence            468897 9999999999998876 99999998654221    000    0 0111 1110 12   2 236899999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ++.......+..+.+..|+.-...+++.+.+..+...+|.+|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            987433333444567788888888888888876444556655

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.45  E-value=0.0002  Score=62.68  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=57.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+... ..+..+.+|.++++.+.++ ++++|.||-+.
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            47899996 9999999999999999999999987655443322 2567899999999988665 46789888554

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.42  E-value=0.00027  Score=58.82  Aligned_cols=35  Identities=20%  Similarity=0.373  Sum_probs=32.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |+|.|+| +|.+|.+++..|+++|++|++.+|+++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            5899999 7999999999999999999999998653

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.41  E-value=0.004  Score=45.18  Aligned_cols=99  Identities=11%  Similarity=0.165  Sum_probs=64.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCC---CCC--C------C---------------CCCCeEEEEccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSD---ISG--L------P---------------SEGALELVYGDV   53 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~---~~~--~------~---------------~~~~~~~~~~D~   53 (229)
                      .||+|.| .|.+|+.+++.|+..|. +++++|.+.=.   +..  +      .               +...++.+..++
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            3788998 69999999999999996 78889886311   111  0      0               012455666666


Q ss_pred             CChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcccee
Q 027007           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (229)
Q Consensus        54 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~  118 (229)
                       +.+...+.++++|+||.+...               ......+.+.|..++  ..+|+.++...
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~---------------~~~~~~l~~~~~~~~--~p~i~~~~~g~  128 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDS---------------LAARLLLNEICREYG--IPFIDAGVNGF  128 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSS---------------HHHHHHHHHHHHHTT---EEEEEEEETT
T ss_pred             -ccccccccccCCCEEEEecCC---------------HHHHHHHHHHHHHcC--CCEEEEEeecC
Confidence             456677778899999988531               222345666777764  36777665533

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.40  E-value=0.00043  Score=59.94  Aligned_cols=73  Identities=26%  Similarity=0.301  Sum_probs=49.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEE-------------EccCCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV-------------YGDVTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~D~~~~~~~~~~~~~~d   67 (229)
                      |+|.|.| .|.+|..++..|++.|++|++.++++++.+.+... ...+.             .+.++-..+..++++++|
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKG-KSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcC-CCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            8999998 79999999999999999999999987765544321 00000             000111223445567899


Q ss_pred             EEEEeCcc
Q 027007           68 VIFHTAAL   75 (229)
Q Consensus        68 ~vi~~a~~   75 (229)
                      +||-+.+.
T Consensus        79 vvii~vpt   86 (411)
T TIGR03026        79 VIIICVPT   86 (411)
T ss_pred             EEEEEeCC
Confidence            99988754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.36  E-value=0.00027  Score=59.58  Aligned_cols=109  Identities=21%  Similarity=0.192  Sum_probs=68.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC------CCeE-EEEcc-----CCChhhHHhhcCCccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LVYGD-----VTDYRSLVDACFGCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~-~~~~D-----~~~~~~~~~~~~~~d~   68 (229)
                      |||-|.| +|++|...+..|++.||+|++++.++.+.+.++..      ++++ +++-+     ++=..+..+++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            9999999 89999999999999999999999988765544331      1110 00101     2223355667788999


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                      ++-+.|.....      .=..++.-....++...++....++|.+=|.
T Consensus        80 ~fIavgTP~~~------dg~aDl~~V~ava~~i~~~~~~~~vvV~KST  121 (414)
T COG1004          80 VFIAVGTPPDE------DGSADLSYVEAVAKDIGEILDGKAVVVIKST  121 (414)
T ss_pred             EEEEcCCCCCC------CCCccHHHHHHHHHHHHhhcCCCeEEEEcCC
Confidence            99888753211      1122344455566666666543355555444

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.35  E-value=0.0067  Score=54.01  Aligned_cols=159  Identities=20%  Similarity=0.174  Sum_probs=99.1

Q ss_pred             EEEEcCC-ChHHHHHHHHHHHCCCeEEEEEcCCCCCC----------CCCCCCCeEEEEccCCChhhHHhhcC-------
Q 027007            3 ILVSGAS-GYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         3 vlItGg~-G~iG~~l~~~l~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      +||||++ |.||.+++..|+..|.+|+++..+-++..          .......+-++.++...+.++..+++       
T Consensus       399 alVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~  478 (866)
T COG4982         399 ALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQT  478 (866)
T ss_pred             EEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccc
Confidence            6899986 46999999999999999999876643211          01111234556777777777655542       


Q ss_pred             --------------CccEEEEeCccc-CCC--CCC--chhhhHhhHHHHHHHHHHHHhcCCC------ceEEEEccc--e
Q 027007           65 --------------GCHVIFHTAALV-EPW--LPD--PSRFFAVNVEGLKNVVQAAKETKTV------EKIIYTSSF--F  117 (229)
Q Consensus        65 --------------~~d~vi~~a~~~-~~~--~~~--~~~~~~~n~~~~~~l~~~~~~~~~~------~~iv~~sS~--~  117 (229)
                                    .+|.+|-.|++. ...  ..+  -+..+++-+....+++-.+++.+..      -++|.-+|-  .
T Consensus       479 ~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNrG  558 (866)
T COG4982         479 ETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNRG  558 (866)
T ss_pred             cccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCCC
Confidence                          157788777762 111  112  2234566677777888877765311      144544442  1


Q ss_pred             eeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc-----CCCeEEEecCceecCCCCc
Q 027007          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-----GLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----gi~~~~irpg~i~g~~~~~  178 (229)
                      .+|+                 ...|+.+|...+.+...|...     -+.++-.+.||+.|-+-+.
T Consensus       559 ~FGg-----------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg  607 (866)
T COG4982         559 MFGG-----------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG  607 (866)
T ss_pred             ccCC-----------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC
Confidence            1111                 134999999888888776532     2566777788988876543

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.33  E-value=0.0012  Score=54.72  Aligned_cols=102  Identities=18%  Similarity=0.237  Sum_probs=70.7

Q ss_pred             EEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCC----CC-----CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            5 VSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         5 ItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~----~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |.| +|.+|++++..|+..+  .++.+++.+.+..+..    ..     ...+++ ..  .+.    +.++++|+||-+|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~~----~~~~daDivVita   72 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKI-RS--GDY----SDCKDADLVVITA   72 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEE-ec--CCH----HHHCCCCEEEECC
Confidence            345 5999999999999887  4799999876543321    10     011222 21  233    4468899999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |.......+..+.+..|+.-...+.+.+.++.....++.+|
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            97543334556789999999999999998886545666666

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.31  E-value=0.00034  Score=55.25  Aligned_cols=38  Identities=32%  Similarity=0.355  Sum_probs=34.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||.|+||+|.+|++++..|++.|++|++.+|++++.+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHH
Confidence            89999999999999999999999999999999876543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.31  E-value=0.005  Score=47.94  Aligned_cols=69  Identities=13%  Similarity=0.174  Sum_probs=48.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---CCCCCCC----------------------CCCCCeEEEEccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGL----------------------PSEGALELVYGDVTD   55 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~----------------------~~~~~~~~~~~D~~~   55 (229)
                      +|+|.|+ |++|+.++..|+..|. +++++|++   .+.+...                      .+...++.+..+++ 
T Consensus        23 ~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~-  100 (200)
T TIGR02354        23 TVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT-  100 (200)
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC-
Confidence            6899995 8999999999999997 69999987   3332220                      00013344445553 


Q ss_pred             hhhHHhhcCCccEEEEe
Q 027007           56 YRSLVDACFGCHVIFHT   72 (229)
Q Consensus        56 ~~~~~~~~~~~d~vi~~   72 (229)
                      .+.+.++++++|+||-+
T Consensus       101 ~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354       101 EENIDKFFKDADIVCEA  117 (200)
T ss_pred             HhHHHHHhcCCCEEEEC
Confidence            45667777888888877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.29  E-value=0.00088  Score=60.81  Aligned_cols=71  Identities=21%  Similarity=0.298  Sum_probs=58.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      ++|+|.| .|-+|+.+++.|.++|++++++++++++.+.+.+ .+...+.+|.++++.++++ ++++|.+|-+.
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            3678888 6999999999999999999999999877665543 3678899999999999876 46788888664

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.29  E-value=0.00026  Score=63.71  Aligned_cols=70  Identities=19%  Similarity=0.238  Sum_probs=57.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +++|.| .|-+|++++++|.++|++|+++++++++.+.+.+ .+...+.+|.+|++.++++ ++++|.++-+.
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            477888 6999999999999999999999999877665543 3678999999999988775 45788776553

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.27  E-value=5.8e-05  Score=58.02  Aligned_cols=37  Identities=38%  Similarity=0.540  Sum_probs=29.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||-|.| .|++|..++..|++.|++|++++.++++.+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~   37 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVE   37 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHH
Confidence            9999997 799999999999999999999999876433

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.26  E-value=0.0015  Score=57.14  Aligned_cols=72  Identities=18%  Similarity=0.277  Sum_probs=50.8

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      +|||||+|                ||-+|.+|++++..+|++|+++.-... .. .+  .+++.+.  +...++..+++.
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-~p--~~v~~i~--V~ta~eM~~av~  330 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-DP--QGVKVIH--VESARQMLAAVE  330 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-CC--CCceEEE--ecCHHHHHHHHH
Confidence            47899988                788999999999999999999974322 11 11  2455554  345555544442


Q ss_pred             ---CccEEEEeCcccCC
Q 027007           65 ---GCHVIFHTAALVEP   78 (229)
Q Consensus        65 ---~~d~vi~~a~~~~~   78 (229)
                         +.|++|++|++.+.
T Consensus       331 ~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        331 AALPADIAIFAAAVADW  347 (475)
T ss_pred             hhCCCCEEEEeccccce
Confidence               37999999998554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.25  E-value=0.0054  Score=48.74  Aligned_cols=96  Identities=15%  Similarity=0.188  Sum_probs=60.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC--------------------------CCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~D~~   54 (229)
                      +|+|.| +|++|+++++.|+..|. +++++|.+.-....+.                          +.-.++.+..++ 
T Consensus        23 ~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-  100 (228)
T cd00757          23 RVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-  100 (228)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-
Confidence            689998 79999999999999994 7888876532111111                          111344455555 


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                      +.+++.+.++++|+||.+...       +        ..-..+.+.|.+++  ..+|+.+..
T Consensus       101 ~~~~~~~~~~~~DvVi~~~d~-------~--------~~r~~l~~~~~~~~--ip~i~~g~~  145 (228)
T cd00757         101 DAENAEELIAGYDLVLDCTDN-------F--------ATRYLINDACVKLG--KPLVSGAVL  145 (228)
T ss_pred             CHHHHHHHHhCCCEEEEcCCC-------H--------HHHHHHHHHHHHcC--CCEEEEEec
Confidence            345667778889999988631       1        12234556676664  255555443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.21  E-value=0.00034  Score=66.43  Aligned_cols=73  Identities=22%  Similarity=0.133  Sum_probs=57.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcCCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HS-------------VRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   66 (229)
                      +|+|.|+ |++|+..++.|++.. ++             |++.+++.++.+.+... ++++.++.|++|.+++.++++++
T Consensus       571 rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~~~  649 (1042)
T PLN02819        571 NVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVSQV  649 (1042)
T ss_pred             cEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhcCC
Confidence            6999995 999999999998753 34             77788776554443322 25677899999999999998999


Q ss_pred             cEEEEeCcc
Q 027007           67 HVIFHTAAL   75 (229)
Q Consensus        67 d~vi~~a~~   75 (229)
                      |+||++...
T Consensus       650 DaVIsalP~  658 (1042)
T PLN02819        650 DVVISLLPA  658 (1042)
T ss_pred             CEEEECCCc
Confidence            999999864

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.21  E-value=0.0091  Score=47.84  Aligned_cols=95  Identities=18%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC------------------------CC--CeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS------------------------EG--ALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~------------------------~~--~~~~~~~D~~   54 (229)
                      +|+|.| .|++|+.+++.|+..| -+++++|.+.-....+..                        ++  .++.+...+ 
T Consensus        26 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i-  103 (240)
T TIGR02355        26 RVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL-  103 (240)
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC-
Confidence            688888 6999999999999999 578888886433222211                        11  233333333 


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      +.+.+.++++++|+||.+..       +        ......+-++|.+++  ..+|+.++
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D-------~--------~~~r~~ln~~~~~~~--ip~v~~~~  147 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTD-------N--------VEVRNQLNRQCFAAK--VPLVSGAA  147 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCC-------C--------HHHHHHHHHHHHHcC--CCEEEEEe
Confidence            23456667778888887752       1        122344556776664  25555443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.20  E-value=0.0025  Score=50.12  Aligned_cols=70  Identities=17%  Similarity=0.299  Sum_probs=46.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC-------------------------CCCCeEEEEccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------------------------SEGALELVYGDVTD   55 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-------------------------~~~~~~~~~~D~~~   55 (229)
                      +|+|.| .|++|+.+++.|+..|. +++++|.+.-....+.                         +...++.+...+++
T Consensus        30 ~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~  108 (212)
T PRK08644         30 KVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKIDE  108 (212)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecCH
Confidence            688998 69999999999999995 5999988732111111                         11233444444433


Q ss_pred             hhhHHhhcCCccEEEEeC
Q 027007           56 YRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a   73 (229)
                       +.+.+.++++|+||.+.
T Consensus       109 -~~~~~~~~~~DvVI~a~  125 (212)
T PRK08644        109 -DNIEELFKDCDIVVEAF  125 (212)
T ss_pred             -HHHHHHHcCCCEEEECC
Confidence             45556677788888773

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.20  E-value=0.0008  Score=63.63  Aligned_cols=154  Identities=18%  Similarity=0.213  Sum_probs=100.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCCC---------CCCCCeEEEEccCCChhhHHhhcCC------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGL---------PSEGALELVYGDVTDYRSLVDACFG------   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~------   65 (229)
                      +.+|+||-|+.|.++++-|..+|.+ +++.+|+--+ ...         ...-.+.+-.-|++..+...+++..      
T Consensus      1770 sYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGir-tGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1770 SYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIR-TGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             eEEEeccccchhHHHHHHHHhcCceEEEEeccccch-hhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            4789999999999999999999975 5566665211 111         1111233344677777776666553      


Q ss_pred             ccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccce-eeecCCCcccCCCCcccccc
Q 027007           66 CHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFF-ALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        66 ~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~-~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +-.|+|+|.+..      .+..++...-+.-+.+|++|-+.-+.... ..-||..||.. +.|+..              
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G-------------- 1914 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG-------------- 1914 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc--------------
Confidence            568899988732      22234445555667788888777666643 24677777753 333322              


Q ss_pred             ccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCce
Q 027007          138 FCTQYERSKAVADKIALQAASEGLPIVPVYPGVI  171 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i  171 (229)
                       .+.||.+...+|+++..-..+|.+-++|.=|.|
T Consensus      1915 -QtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 -QTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -ccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence             234999999999998776666887777765554

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.18  E-value=0.012  Score=43.08  Aligned_cols=97  Identities=19%  Similarity=0.235  Sum_probs=60.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC--------------------------CCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~D~~   54 (229)
                      ||+|.| .|++|+++++.|+..|. +++++|.+.-....+.                          +.-.++.+..++.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            588999 59999999999999996 6888887632211111                          0112334444443


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                      +. ...+.++++|+||.+...               ......+.+.|++++  ..++..++..
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~---------------~~~~~~l~~~~~~~~--i~~i~~~~~g  124 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN---------------IAVRRALNRACKELG--IPVIDAGGLG  124 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC---------------HHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            32 235566788888877531               233455667777764  3566666543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.18  E-value=0.00064  Score=59.00  Aligned_cols=107  Identities=18%  Similarity=0.108  Sum_probs=70.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC---C----CeEEEEEcC--CCCCCC----CCC-----CCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQ---G----HSVRALVRR--TSDISG----LPS-----EGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~---g----~~V~~~~r~--~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      +|+||||+|.||.+|+-.+++-   |    ..+.+++.+  .+.++.    +..     ...+.+. .|      -.+.+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LDVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CHHHh
Confidence            6999999999999999998763   3    235666653  222111    000     0112222 11      13557


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEcc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSS  115 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS  115 (229)
                      +++|+||-+||.......+..+.++.|..-.....+.+.++.. ..+++.+.|
T Consensus       198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            8999999999975444445667899999999999999988753 246666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.14  E-value=0.0025  Score=53.92  Aligned_cols=98  Identities=21%  Similarity=0.216  Sum_probs=55.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE-EcCCCCCCCCCC-CCCeEEE-EccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPS-EGALELV-YGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |||.|.|+||++|..+++.|.+. +.+++.+ +++....+.+.. .+.+... ..++.+. +..++.+++|+|+-+.+..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            79999999999999999999876 5787744 443322221110 0111111 1112211 2233345799999876420


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                                      ....++..+.+.+  .++|=.|+..
T Consensus        80 ----------------~s~~~~~~~~~~G--~~VIDlS~~f  102 (346)
T TIGR01850        80 ----------------VSAELAPELLAAG--VKVIDLSADF  102 (346)
T ss_pred             ----------------HHHHHHHHHHhCC--CEEEeCChhh
Confidence                            2344455554443  4777777754

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.13  E-value=0.016  Score=46.14  Aligned_cols=32  Identities=22%  Similarity=0.305  Sum_probs=27.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~   34 (229)
                      +|+|.| .|++|+++++.|+..| .+++++|.+.
T Consensus        13 ~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          13 HVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            688998 6999999999999999 4888888763

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.13  E-value=0.00021  Score=58.59  Aligned_cols=69  Identities=23%  Similarity=0.288  Sum_probs=47.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|...| .+|++++|+.++.+.+... .....+..++    +..+.+.++|+|||+.+.
T Consensus       125 ~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~DivInaTp~  195 (278)
T PRK00258        125 RILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDLIINATSA  195 (278)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCEEEECCcC
Confidence            6899996 999999999999999 7999999987654433221 0000011111    223456789999999764

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.11  E-value=0.0098  Score=46.22  Aligned_cols=101  Identities=21%  Similarity=0.297  Sum_probs=60.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC----------------------------CCCCCeEEEEcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----------------------------PSEGALELVYGD   52 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~----------------------------~~~~~~~~~~~D   52 (229)
                      +|+|.|. |++|+++++.|+..| .+++++|.+.-....+                            .+.-.++.+..+
T Consensus        21 ~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~   99 (198)
T cd01485          21 KVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEED   99 (198)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecc
Confidence            7899985 569999999999999 5688888763211111                            111233444445


Q ss_pred             CCC-hhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee
Q 027007           53 VTD-YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (229)
Q Consensus        53 ~~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~  120 (229)
                      +++ .+...+.++++|+||.+..               +...-..+-+.|.+++  ..+|+.++...+|
T Consensus       100 ~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~~--ip~i~~~~~G~~G  151 (198)
T cd01485         100 SLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKHH--IPFISCATYGLIG  151 (198)
T ss_pred             cccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEeecCEE
Confidence            542 3445566677888886531               1122334556777664  2677776655554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.08  E-value=0.0017  Score=56.24  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL   40 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~   40 (229)
                      |+|.|.| .|++|..++..|+++|++|++.++++++.+.+
T Consensus         4 ~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          4 ETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             cEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            5799998 69999999999999999999999988765543

>PRK08328 hypothetical protein; Provisional

Probab=97.07  E-value=0.013  Score=46.63  Aligned_cols=32  Identities=28%  Similarity=0.365  Sum_probs=27.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~   34 (229)
                      +|+|.| +|++|++++..|+..| .+++++|.+.
T Consensus        29 ~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         29 KVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            688998 6999999999999999 5788887654

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.06  E-value=0.0013  Score=57.76  Aligned_cols=113  Identities=14%  Similarity=0.133  Sum_probs=65.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCCCCCeEEEEcc------------CCChhhHHhhcCCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGD------------VTDYRSLVDACFGC   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~D------------~~~~~~~~~~~~~~   66 (229)
                      |+|.|.| .|++|..++..|+++|  ++|++++.++++.+.+... ...+.+-+            ++-..++.++++++
T Consensus         2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g-~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSD-QLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcC-CCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            8999997 7999999999999885  8899999987765544321 11111111            11122334456778


Q ss_pred             cEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                      |++|-|.+..... ......-..++......++.+.++.+.+.+|.+.|.
T Consensus        80 dvi~I~V~TP~~~-~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST  128 (473)
T PLN02353         80 DIVFVSVNTPTKT-RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST  128 (473)
T ss_pred             CEEEEEeCCCCCC-CCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence            9999887642110 000001123444455555555555444456665554

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.06  E-value=0.00082  Score=57.32  Aligned_cols=72  Identities=14%  Similarity=0.167  Sum_probs=53.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |.+|+..++.+...|.+|++++|++++.+.+..... ..+..+..+.+++.+.++++|+||+++..
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            5888875 899999999999999999999998655433221111 12334556778888888999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.05  E-value=0.012  Score=49.01  Aligned_cols=99  Identities=19%  Similarity=0.227  Sum_probs=60.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC--------------------------CCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~D~~   54 (229)
                      ||+|.| .|++|.++++.|+..| .+++++|.+.-....+..                          .-.++.+..+++
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            689999 5999999999999999 578888876422222211                          123445556666


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcccee
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~  118 (229)
                      +...-.+.++++|+||.+..               |...-..+-+.|....  ..+|..++...
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D---------------n~~ar~~in~~c~~~~--ip~I~~gt~G~  126 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD---------------NLAARRHVNKMCLAAD--VPLIESGTTGF  126 (312)
T ss_pred             CccchHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHCC--CCEEEEecCcc
Confidence            54333455677888887642               1223344556666653  25566555443

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.05  E-value=0.0018  Score=54.55  Aligned_cols=67  Identities=16%  Similarity=0.258  Sum_probs=40.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEE---EEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ||.|.||||++|+.+++.|.+++|.++   .+.+....-+.+... .......|+. .+    .+.++|+||-+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-~~~~~~~~~~-~~----~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-GKELEVNEAK-IE----SFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-CeeEEEEeCC-hH----HhcCCCEEEECCC
Confidence            589999999999999999999887643   444554332222211 2334444553 11    1245666666554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.05  E-value=0.0023  Score=48.37  Aligned_cols=52  Identities=21%  Similarity=0.333  Sum_probs=43.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|+|++..+|..+++.|.++|.+|+++.|+.                      +++.+.+.++|+||.+.+.
T Consensus        46 ~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          46 KVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             EEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            799999877789999999999999999988752                      3556678899999988764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.03  E-value=0.026  Score=45.86  Aligned_cols=32  Identities=25%  Similarity=0.351  Sum_probs=28.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~   34 (229)
                      +|+|.| .|++|+++++.|+..| .++++++.+.
T Consensus        32 ~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         32 HICVVG-IGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            688998 6999999999999999 6899998764

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.00  E-value=0.0018  Score=54.71  Aligned_cols=33  Identities=39%  Similarity=0.642  Sum_probs=28.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~   33 (229)
                      |||.|.|+||++|+.+++.|.+. +++++.+.++
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~   36 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR   36 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence            58999999999999999999886 5788777664

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.99  E-value=0.0016  Score=53.31  Aligned_cols=66  Identities=27%  Similarity=0.448  Sum_probs=45.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| .|.+|..++..|.++|++|++.+|+++..+.....+.+.    ...+  +. +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~----~~~~--~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD----EAST--DL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc----cccC--CH-hHhcCCCEEEEcCC
Confidence            8999998 799999999999999999999999865433322111111    0111  11 23578899988863

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.98  E-value=0.0019  Score=55.17  Aligned_cols=53  Identities=19%  Similarity=0.257  Sum_probs=42.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.||.|.+|..+++.|.++|++|++.+|+..                     ++..++++++|+||-+..
T Consensus        99 ~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         99 RPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCc
Confidence            47999999999999999999999999999998521                     123345567888887764

>PRK08223 hypothetical protein; Validated

Probab=96.98  E-value=0.016  Score=47.47  Aligned_cols=70  Identities=11%  Similarity=0.108  Sum_probs=47.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC------------------------CC--CeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS------------------------EG--ALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~------------------------~~--~~~~~~~D~~   54 (229)
                      +|+|.| .|++|++++..|+..| -+++++|.+.=....+..                        ++  .++.+...++
T Consensus        29 ~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~  107 (287)
T PRK08223         29 RVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG  107 (287)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            688998 6999999999999999 578888876422111111                        12  3444555554


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+...++++++|+||.+.
T Consensus       108 -~~n~~~ll~~~DlVvD~~  125 (287)
T PRK08223        108 -KENADAFLDGVDVYVDGL  125 (287)
T ss_pred             -ccCHHHHHhCCCEEEECC
Confidence             445667778888888554

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.97  E-value=0.00049  Score=56.48  Aligned_cols=71  Identities=18%  Similarity=0.152  Sum_probs=48.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCC--CeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEG--ALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.| +|+.|++++..|++.|. +|+++.|+.++.+.+...-  .....  .+...+++...+.++|+|||+.+.
T Consensus       127 ~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~--~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       127 RGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVIT--RLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             eEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcce--eccchhhhhhcccCCCEEEECCCC
Confidence            689998 59999999999999996 7999999877655443210  00111  121223444556789999999765

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.97  E-value=0.0026  Score=45.29  Aligned_cols=68  Identities=25%  Similarity=0.359  Sum_probs=39.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCC-CCCCCCCC----CCeE-EEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTS-DISGLPSE----GALE-LVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~-~~~~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ||.|+|+||++|+.+++.|.+.- ++++.+..+.. .-..+...    .... ....| .+.+.    +.++|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPEE----LSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGHH----HTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchhH----hhcCCEEEecCc
Confidence            78999999999999999999864 56555444433 22221110    0111 11112 23333    378999998864

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.96  E-value=0.00084  Score=55.24  Aligned_cols=65  Identities=17%  Similarity=0.241  Sum_probs=47.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +++|+|. |.+|+.+++.|...|++|++.+|+.++....... +..     ..+.+++.+.++++|+||++.
T Consensus       153 ~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~-----~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       153 NVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM-GLI-----PFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             EEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCe-----eecHHHHHHHhccCCEEEECC
Confidence            6899996 8899999999999999999999986543221110 111     113456777788999999986

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.95  E-value=0.017  Score=49.03  Aligned_cols=70  Identities=23%  Similarity=0.300  Sum_probs=48.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCC--------------------------CCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~D~~   54 (229)
                      +|+|.| +|++|+++++.|+..| -+++++|.+.-....+.                          +.-.++.+..+++
T Consensus        30 ~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~  108 (355)
T PRK05597         30 KVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT  108 (355)
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC
Confidence            789998 5999999999999999 57888888642211111                          1123444555554


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+...+.++++|+||.+.
T Consensus       109 -~~~~~~~~~~~DvVvd~~  126 (355)
T PRK05597        109 -WSNALDELRDADVILDGS  126 (355)
T ss_pred             -HHHHHHHHhCCCEEEECC
Confidence             455667778899999885

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.95  E-value=0.015  Score=46.41  Aligned_cols=98  Identities=18%  Similarity=0.139  Sum_probs=59.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC--------------------------CCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~D~~   54 (229)
                      ||+|.| .|++|+++++.|+..| -+++++|.+.=....+..                          .-.++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            588998 6999999999999999 478888876321111111                          123445566665


Q ss_pred             ChhhH-HhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           55 DYRSL-VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        55 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                      +.++. .+.++++|+||.+..               |+..-..+-+.|....  .-+|..++..
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D---------------n~~aR~~ln~~c~~~~--iplI~~g~~G  126 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD---------------NIIARRYVNGMLIFLI--VPLIESGTEG  126 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEcccC
Confidence            43332 345677888887642               2333445666666654  2566655543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.94  E-value=0.016  Score=46.53  Aligned_cols=70  Identities=21%  Similarity=0.279  Sum_probs=47.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC--------------------------CCCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~D~~   54 (229)
                      +|+|.|. |++|+++++.|+..| .+++++|.+.-....+                          .+...++.+...++
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i~  112 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARLD  112 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            7899986 999999999999999 4788887753211111                          11123444555553


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+...+.++++|+||.+.
T Consensus       113 -~~~~~~~~~~~DiVi~~~  130 (245)
T PRK05690        113 -DDELAALIAGHDLVLDCT  130 (245)
T ss_pred             -HHHHHHHHhcCCEEEecC
Confidence             455667788899999885

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.93  E-value=0.00025  Score=58.22  Aligned_cols=67  Identities=21%  Similarity=0.264  Sum_probs=46.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC-----CCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +++|.| +|+.|++++..|+..|. +|++++|+.++.+.+...     ....+..     .+++.+.+.++|+|||+..
T Consensus       129 ~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        129 RVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVHATP  201 (284)
T ss_pred             EEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEECCc
Confidence            689999 58899999999999996 799999987665543221     1112211     2334445678999999954

>PRK04148 hypothetical protein; Provisional

Probab=96.92  E-value=0.00047  Score=49.78  Aligned_cols=67  Identities=15%  Similarity=0.164  Sum_probs=49.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |++++.| +| .|.+++..|.+.|++|++++.++...+.... ..++.+..|+.+++-  ++-+++|.|+-.
T Consensus        18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~~--~~y~~a~liysi   84 (134)
T PRK04148         18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPNL--EIYKNAKLIYSI   84 (134)
T ss_pred             CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCCH--HHHhcCCEEEEe
Confidence            4789999 45 8999999999999999999998765443322 256888999988753  233567766643

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.92  E-value=0.0067  Score=51.93  Aligned_cols=70  Identities=23%  Similarity=0.249  Sum_probs=46.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCC------------------------CC--CeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS------------------------EG--ALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~------------------------~~--~~~~~~~D~~   54 (229)
                      +|+|.| +|++|++++..|+..|. ++++++++.-....+..                        ++  .++.+...++
T Consensus       137 ~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~  215 (376)
T PRK08762        137 RVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVT  215 (376)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            688886 69999999999999995 78999886311111100                        12  2333444443


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+.+.++++++|+||++.
T Consensus       216 -~~~~~~~~~~~D~Vv~~~  233 (376)
T PRK08762        216 -SDNVEALLQDVDVVVDGA  233 (376)
T ss_pred             -hHHHHHHHhCCCEEEECC
Confidence             345667778899999885

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.92  E-value=0.00083  Score=52.30  Aligned_cols=66  Identities=17%  Similarity=0.185  Sum_probs=44.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+++|+|. |.+|+++++.|.+.|++|++.++++++.+.+...-+...+  |   .+++..  .++|+++.+|.
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~---~~~l~~--~~~Dv~vp~A~   94 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--A---PEEIYS--VDADVFAPCAL   94 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--c---chhhcc--ccCCEEEeccc
Confidence            57999996 6999999999999999999998876544332221011211  2   222221  26899998874

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.91  E-value=0.00097  Score=54.41  Aligned_cols=66  Identities=20%  Similarity=0.265  Sum_probs=45.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|++|++.+|+.++.+.+...    .......  .   ++  ....++|+|||+.+.
T Consensus       119 ~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~--~---~~--~~~~~~DivInatp~  188 (270)
T TIGR00507       119 RVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS--M---DE--LPLHRVDLIINATSA  188 (270)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec--h---hh--hcccCccEEEECCCC
Confidence            6899997 8999999999999999999999986554332211    1112111  1   11  123578999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.88  E-value=0.0031  Score=53.02  Aligned_cols=26  Identities=31%  Similarity=0.506  Sum_probs=23.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHS   26 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~   26 (229)
                      |+|.|+||||++|..+++.|.++++.
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP   30 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFP   30 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCC
Confidence            47999999999999999999987653

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.88  E-value=0.018  Score=43.75  Aligned_cols=70  Identities=16%  Similarity=0.268  Sum_probs=46.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC---CCCCC----------------------CCCCCCeEEEEccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT---SDISG----------------------LPSEGALELVYGDVTD   55 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~---~~~~~----------------------~~~~~~~~~~~~D~~~   55 (229)
                      ||+|.| +|++|+.+++.|+..|. +++++|.+.   +++..                      +.+...++.+...++ 
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            588999 69999999999999996 599998874   21110                      011123344444443 


Q ss_pred             hhhHHhhcCCccEEEEeC
Q 027007           56 YRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a   73 (229)
                      .+.+.+.++++|+||.+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             hhhHHHHhcCCCEEEECC
Confidence            345666778888888773

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.87  E-value=0.0013  Score=59.83  Aligned_cols=70  Identities=23%  Similarity=0.383  Sum_probs=57.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +|+|.| .|-+|+.+++.|.++|+++++++.++++.+.+.. .+...+.+|.++++-++++ ++++|.+|-+.
T Consensus       402 ~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        402 RVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            678888 6999999999999999999999999887665543 2678899999999988765 45788888664

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.84  E-value=0.0069  Score=51.16  Aligned_cols=25  Identities=16%  Similarity=0.364  Sum_probs=23.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH   25 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~   25 (229)
                      |||.|.|+||++|.++++.|.+++|
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC
Confidence            5899999999999999999998876

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.84  E-value=0.0013  Score=54.37  Aligned_cols=66  Identities=23%  Similarity=0.317  Sum_probs=48.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      .+++|.|. |.+|+.+++.|.+.|.+|++.+|++++...... .+.+++     ..+++.+.++++|+||+++
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-----~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-----HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-----cHHHHHHHhCCCCEEEECC
Confidence            37999995 889999999999999999999998654222111 122222     3456677788999999986

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.83  E-value=0.0016  Score=54.18  Aligned_cols=70  Identities=23%  Similarity=0.263  Sum_probs=46.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC-hhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~~a~   74 (229)
                      +++|+|++|.+|.++++.+...|.+|+++.+++++.+.+........+  |..+ .+.+.+. .++|+++++++
T Consensus       165 ~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g  235 (332)
T cd08259         165 TVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVG  235 (332)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCC
Confidence            689999999999999999999999999998876443322111111122  2211 2223332 36899999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.81  E-value=0.0047  Score=50.67  Aligned_cols=52  Identities=23%  Similarity=0.291  Sum_probs=42.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|.+|.+|+.++..|.++|..|+++.|+.                      .++.+.++++|+||++.|.
T Consensus       161 ~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        161 HAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             EEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccCC
Confidence            799999998999999999999999998887631                      2344555789999999863

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.78  E-value=0.0017  Score=53.76  Aligned_cols=67  Identities=18%  Similarity=0.329  Sum_probs=47.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|.| .|-+|.++++.|++.|++|++.+|++++.+.+... ...    ...+.+++.+.+..+|+|+-+.
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~-g~~----~~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED-RTT----GVANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCc----ccCCHHHHHhhcCCCCEEEEEc
Confidence            8999998 69999999999999999999999987654443321 111    1234555555556678777664

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.77  E-value=0.0046  Score=51.42  Aligned_cols=34  Identities=32%  Similarity=0.489  Sum_probs=31.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |||.|.| +|.+|+++++.|.+.|++|++.+|+..
T Consensus         5 m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          5 KTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            8999997 699999999999999999999999753

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.75  E-value=0.0038  Score=53.59  Aligned_cols=38  Identities=39%  Similarity=0.454  Sum_probs=31.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL   40 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~   40 (229)
                      |||-|.| .|++|..++..++ .|++|+++++++++.+.+
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l   38 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAML   38 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHH
Confidence            8999997 7999999997766 599999999988765443

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.73  E-value=0.025  Score=48.71  Aligned_cols=96  Identities=20%  Similarity=0.163  Sum_probs=58.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCC------------------------CC--CeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS------------------------EG--ALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~------------------------~~--~~~~~~~D~~   54 (229)
                      +|+|.| .|++|+.++..|+..|. +++++|.+.-....+..                        ++  .++.+..+++
T Consensus        44 ~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~  122 (392)
T PRK07878         44 RVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD  122 (392)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC
Confidence            689998 69999999999999994 68888775322111111                        12  2334444554


Q ss_pred             ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                       .+...++++++|+||.+..               |...-..+-++|...+  ..+|+.+..
T Consensus       123 -~~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~--~p~v~~~~~  166 (392)
T PRK07878        123 -PSNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLAG--KPYVWGSIY  166 (392)
T ss_pred             -hhHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEec
Confidence             3455667788888887642               1222334556676664  246665443

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.69  E-value=0.043  Score=42.60  Aligned_cols=32  Identities=34%  Similarity=0.464  Sum_probs=27.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~   34 (229)
                      ||+|.| .|++|+++++.|+..|. +++++|.+.
T Consensus        23 ~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~   55 (197)
T cd01492          23 RILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRT   55 (197)
T ss_pred             cEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            789998 56699999999999995 688887763

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.68  E-value=0.0013  Score=54.79  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=49.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|+|.|+ |.+|..+++.|...| .+|++++|++++...+...-+.     +..+.+++.+.+.++|+||.+.+.
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCCC
Confidence            58999985 999999999998876 6899999987654433221111     223345677777889999998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.67  E-value=0.0027  Score=52.46  Aligned_cols=36  Identities=42%  Similarity=0.684  Sum_probs=32.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      |+|.|.|+ |.+|..++..|.+.|++|++++|+.+..
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~   36 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHL   36 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHH
Confidence            89999995 9999999999999999999999965543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.67  E-value=0.00032  Score=52.74  Aligned_cols=64  Identities=23%  Similarity=0.271  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|-+.| .|-+|+.+++.|+++|++|++.+|++++.+.+... +  ...+     ++..++.+++|+|+-+.
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-g--~~~~-----~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-G--AEVA-----DSPAEAAEQADVVILCV   65 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-T--EEEE-----SSHHHHHHHBSEEEE-S
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-h--hhhh-----hhhhhHhhcccceEeec
Confidence            5799999 59999999999999999999999987655443321 1  1122     23444556679888775

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.65  E-value=0.032  Score=47.67  Aligned_cols=70  Identities=20%  Similarity=0.333  Sum_probs=48.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC--------------------------CCCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~D~~   54 (229)
                      +|+|.| .|++|++++..|+..| .+++++|.+.=....+                          .+.-.++.+...++
T Consensus        43 ~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  121 (370)
T PRK05600         43 RVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERLT  121 (370)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeecC
Confidence            689998 6999999999999999 5899998863111111                          11123444555553


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+...++++++|+||.+.
T Consensus       122 -~~~~~~~~~~~DlVid~~  139 (370)
T PRK05600        122 -AENAVELLNGVDLVLDGS  139 (370)
T ss_pred             -HHHHHHHHhCCCEEEECC
Confidence             456667788899999885

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.65  E-value=0.0094  Score=50.95  Aligned_cols=65  Identities=26%  Similarity=0.278  Sum_probs=51.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |+|+|.|| |.+|+.+++...+.|++|++++.+++... ...    -..+.+|..|.+.+.++.+.+|+|.
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a----d~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA----DEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC----ceEEecCCCCHHHHHHHHhcCCEEE
Confidence            46899997 79999999999999999999988654311 111    1456688999999999988899774

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.59  E-value=0.0016  Score=56.38  Aligned_cols=69  Identities=14%  Similarity=0.150  Sum_probs=51.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|+ |.+|+.++..|.+.| .+++++.|+.++.+.+...-+    .+.+...+++.+.+.++|+||++.+.
T Consensus       183 kvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        183 NVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCeEecHHHHHHHhccCCEEEECcCC
Confidence            7899995 999999999999999 579999998766554432100    01233456777788899999999874

>PRK07411 hypothetical protein; Validated

Probab=96.59  E-value=0.037  Score=47.63  Aligned_cols=70  Identities=20%  Similarity=0.227  Sum_probs=47.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC------------------------CC--CeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS------------------------EG--ALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~------------------------~~--~~~~~~~D~~   54 (229)
                      +|+|.| .|++|+++++.|+..| -+++++|.+.-....+..                        ++  .++.+...++
T Consensus        40 ~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~  118 (390)
T PRK07411         40 SVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS  118 (390)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC
Confidence            689998 6999999999999999 478888775322111111                        12  3445555554


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+...+.+.++|+||.+.
T Consensus       119 -~~~~~~~~~~~D~Vvd~~  136 (390)
T PRK07411        119 -SENALDILAPYDVVVDGT  136 (390)
T ss_pred             -HHhHHHHHhCCCEEEECC
Confidence             345566778899999885

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.57  E-value=0.0099  Score=51.10  Aligned_cols=69  Identities=19%  Similarity=0.109  Sum_probs=52.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   73 (229)
                      |+|+|+|+ |..|+.+++.+.+.|++|++++.++.......   .-..+..|..|.+.+.++++  ++|.|+-..
T Consensus        13 ~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         13 TRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AHRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            68999985 78999999999999999999998764311110   11246778889999888887  789888653

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.57  E-value=0.0055  Score=51.78  Aligned_cols=73  Identities=19%  Similarity=0.116  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC----CccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~   75 (229)
                      ++|||.||+|++|++.++-....|...+++.++.++.+-....+..+  ..|..+++-.++..+    ++|+|+.|.+-
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~--vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADE--VVDYKDENVVELIKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcE--eecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence            36999999999999999988888844444555544433222111112  235656444444333    49999999875

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.54  E-value=0.0019  Score=53.96  Aligned_cols=35  Identities=37%  Similarity=0.543  Sum_probs=31.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |||.|.| .|.+|+.++..|++.|++|++.+|+++.
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~   36 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQ   36 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            6899998 5999999999999999999999997643

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.53  E-value=0.004  Score=48.30  Aligned_cols=35  Identities=31%  Similarity=0.374  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |++..+||+|.||+.++++|...||+|++..|+.+
T Consensus         1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~   35 (211)
T COG2085           1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGP   35 (211)
T ss_pred             CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence            66666777999999999999999999999977654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.51  E-value=0.0011  Score=50.50  Aligned_cols=66  Identities=18%  Similarity=0.154  Sum_probs=44.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ++|.|.| .|.||+++++.|..-|.+|++.+|........         ........+++++++.+|+|+.+....
T Consensus        37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~---------~~~~~~~~~l~ell~~aDiv~~~~plt  102 (178)
T PF02826_consen   37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA---------DEFGVEYVSLDELLAQADIVSLHLPLT  102 (178)
T ss_dssp             SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH---------HHTTEEESSHHHHHHH-SEEEE-SSSS
T ss_pred             CEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhc---------ccccceeeehhhhcchhhhhhhhhccc
Confidence            3788998 69999999999999999999999986421100         000112346667788899999887543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.51  E-value=0.012  Score=48.83  Aligned_cols=71  Identities=15%  Similarity=0.132  Sum_probs=47.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH---Hhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL---VDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~---~~~~--~~~d~vi~~a~   74 (229)
                      +++|+|+++.+|.++++.+...|++|++++++.++.+.+... .... ..|..+.+..   .+..  +++|.++++++
T Consensus       169 ~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g  244 (342)
T cd08266         169 TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL-GADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG  244 (342)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence            689999999999999999999999999998876543322111 1111 1244443332   2222  25899999986

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.51  E-value=0.014  Score=47.72  Aligned_cols=68  Identities=26%  Similarity=0.353  Sum_probs=43.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh--hh-HHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RS-LVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~-~~~~~~~~d~vi~~a~~   75 (229)
                      |+|+|.| .|.||+.+++.|.++|+.|.++.++.........      ...++.|.  ++ .......+|+||-+..+
T Consensus         4 ~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a------~~lgv~d~~~~~~~~~~~~~aD~VivavPi   74 (279)
T COG0287           4 MKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAA------LELGVIDELTVAGLAEAAAEADLVIVAVPI   74 (279)
T ss_pred             cEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHH------hhcCcccccccchhhhhcccCCEEEEeccH
Confidence            3555555 8999999999999999999888776543221111      12344332  12 24455678999988643

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.49  E-value=0.0056  Score=53.23  Aligned_cols=39  Identities=28%  Similarity=0.336  Sum_probs=33.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP   41 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~   41 (229)
                      |+|-|.| .|++|..++..|++ |++|++.++++++.+.+.
T Consensus         7 mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~   45 (425)
T PRK15182          7 VKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK   45 (425)
T ss_pred             CeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH
Confidence            7899997 79999999999776 699999999987766554

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.48  E-value=0.0015  Score=58.32  Aligned_cols=68  Identities=18%  Similarity=0.112  Sum_probs=44.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|++|++++|+.++.+.+...-..     +....++..+. ....|+|||+.+.
T Consensus       381 ~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~-----~~~~~~~~~~~~~~~~diiINtT~v  449 (529)
T PLN02520        381 LFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG-----QALTLADLENFHPEEGMILANTTSV  449 (529)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC-----ceeeHhHhhhhccccCeEEEecccC
Confidence            5899998 7999999999999999999999976554433221010     11122232222 2356889988765

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.47  E-value=0.0047  Score=51.62  Aligned_cols=70  Identities=21%  Similarity=0.158  Sum_probs=50.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|+|.+ ++|...++.....|.+|++++|++++.+...+...-+++..  +|.+..+++-+.+|++|.+++
T Consensus       169 ~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~--~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         169 WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINS--SDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEc--CCchhhHHhHhhCcEEEECCC
Confidence            68999975 99999998888899999999999887654333223333332  255555554445999999986

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.47  E-value=0.0049  Score=51.01  Aligned_cols=34  Identities=41%  Similarity=0.654  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |||.|.| +|.+|..++..|.+.|++|++++| .++
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~   34 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKR   34 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHH
Confidence            8999998 699999999999999999999999 443

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.45  E-value=0.0016  Score=57.48  Aligned_cols=68  Identities=16%  Similarity=0.181  Sum_probs=45.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|+ |++|++++..|.+.|++|++.+|+.++.+.+........  .+   .+++.. +.++|+||++...
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~--~~---~~~~~~-l~~~DiVInatP~  400 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA--FP---LESLPE-LHRIDIIINCLPP  400 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce--ec---hhHhcc-cCCCCEEEEcCCC
Confidence            47899995 899999999999999999999987654443221100011  11   222222 4678999999753

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.45  E-value=0.0021  Score=53.93  Aligned_cols=35  Identities=31%  Similarity=0.415  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |+|.|.| +|-+|.+++..|++.|++|++.+|++++
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            7899997 6999999999999999999999997653

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.44  E-value=0.0029  Score=55.05  Aligned_cols=69  Identities=22%  Similarity=0.324  Sum_probs=49.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|.|+ |.+|+.+++.|...|. +|++++|+.++...+...-+     +++.+.+++.+.+.++|+||.+.+.
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-----~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-----GEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-----CcEeeHHHHHHHhccCCEEEECCCC
Confidence            37899985 9999999999999996 79999998765443322111     1233446666777889999988753

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.43  E-value=0.0031  Score=52.34  Aligned_cols=72  Identities=25%  Similarity=0.350  Sum_probs=49.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEE-----ccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVY-----GDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~-----~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|.| +|..|.+|+..|+++|++|.+..|+++..+++... .+.+++.     .++.-..++.++++++|+|+-..
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            6899999 58999999999999999999999986543332221 1222222     22333446677777788777554

>PRK07877 hypothetical protein; Provisional

Probab=96.42  E-value=0.039  Score=51.02  Aligned_cols=69  Identities=20%  Similarity=0.237  Sum_probs=51.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCC---CCCCCC----------------------CCCCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRT---SDISGL----------------------PSEGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~---~~~~~~----------------------~~~~~~~~~~~D~~   54 (229)
                      +|+|.|. | +|+.++..|+..|.  +++++|.+.   ++++..                      ++...++.+...++
T Consensus       109 ~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~  186 (722)
T PRK07877        109 RIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT  186 (722)
T ss_pred             CEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            7999998 6 99999999999994  899998863   222211                      11124566676765


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+.+.++++++|+||.|.
T Consensus       187 -~~n~~~~l~~~DlVvD~~  204 (722)
T PRK07877        187 -EDNVDAFLDGLDVVVEEC  204 (722)
T ss_pred             -HHHHHHHhcCCCEEEECC
Confidence             678888889999999886

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.012  Score=48.21  Aligned_cols=52  Identities=23%  Similarity=0.306  Sum_probs=44.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|.++.+|+.++..|.++|+.|+++.++.                      .++.+.++++|+||.+.|.
T Consensus       160 ~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        160 NAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCC
Confidence            799999999999999999999999999887642                      2456677899999999875

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.41  E-value=0.011  Score=38.62  Aligned_cols=33  Identities=30%  Similarity=0.581  Sum_probs=29.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |++|.| +|++|..++..|.+.|.+|+++.|++.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence            578888 599999999999999999999999864

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.39  E-value=0.016  Score=48.37  Aligned_cols=62  Identities=18%  Similarity=0.274  Sum_probs=46.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|.|.| .|.||+.+++.|...|++|++.+|.....+      .+..    ....+++.++++++|+|+.+..
T Consensus       138 tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~----~~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        138 TIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQS----FAGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Ccee----ecccccHHHHHhcCCEEEECCC
Confidence            678888 799999999999999999999988653321      1111    1135578888999999998764

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.37  E-value=0.0077  Score=49.54  Aligned_cols=34  Identities=21%  Similarity=0.344  Sum_probs=30.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +|.|.| +|.+|+.++..|+..|++|++.+++++.
T Consensus         5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            788998 5999999999999999999999998654

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.35  E-value=0.0038  Score=54.20  Aligned_cols=68  Identities=21%  Similarity=0.295  Sum_probs=49.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|+ |.+|..+++.|...| .+|++++|+.++...+...-+...     .+.+++.+++.++|+||.+.+.
T Consensus       182 ~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       182 KALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             EEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEECCCC
Confidence            6899985 999999999999999 789999998765433222111111     2345677777899999998653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.33  E-value=0.0031  Score=52.06  Aligned_cols=65  Identities=23%  Similarity=0.318  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| .|.+|+.+++.|++.|++|++.+|++++.+.+... ++.       -.++..++++++|+||-+..
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~-------~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAE-------TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCe-------ecCCHHHHHhcCCEEEEeCC
Confidence            6899998 69999999999999999999999886544332211 111       11233445567888887753

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.28  E-value=0.013  Score=46.83  Aligned_cols=70  Identities=20%  Similarity=0.163  Sum_probs=44.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh----cCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA----CFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~d~vi~~a~   74 (229)
                      +|+|+|+++ +|..+++.+...|.+|+++++++++.+.+.....-..  .|..+.+....+    -+.+|+++++++
T Consensus       137 ~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~~  210 (271)
T cd05188         137 TVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHV--IDYKEEDLEEELRLTGGGGADVVIDAVG  210 (271)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCcee--ccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence            689999988 9999999998999999999887644332211111111  122222222211    245899999875

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.27  E-value=0.02  Score=49.26  Aligned_cols=68  Identities=19%  Similarity=0.219  Sum_probs=51.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +++|+| .|-+|+.++++|.++|.++++++.+..  +... ..+..++.+|.+|.+.++++ +++++.||-+.
T Consensus       242 HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~-~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        242 HFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL-PDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             eEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhc-cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            578888 588999999999999999988886521  2111 13567899999999998876 45788888553

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.27  E-value=0.0028  Score=55.41  Aligned_cols=68  Identities=18%  Similarity=0.183  Sum_probs=45.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~~~   76 (229)
                      +++|||+++ +|.++++.|++.|++|++.+++......    +.. .++++..++  ++.++   +. ++|.||+++|+.
T Consensus         7 ~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~~~~~~--~~~~~---~~~~~d~vV~s~gi~   79 (447)
T PRK02472          7 KVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIKVICGS--HPLEL---LDEDFDLMVKNPGIP   79 (447)
T ss_pred             EEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCEEEeCC--CCHHH---hcCcCCEEEECCCCC
Confidence            689999977 9999999999999999999876532211    111 133443332  22222   23 489999999864

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.25  E-value=0.0031  Score=51.79  Aligned_cols=71  Identities=21%  Similarity=0.254  Sum_probs=46.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|+ |+.|++++..|++.|. ++++++|+.++.+.+...    .....+.  ..+..++.+.+..+|+|||+...
T Consensus       129 ~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINaTp~  204 (283)
T PRK14027        129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNATPM  204 (283)
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEcCCC
Confidence            6899995 9999999999999995 799999987665543221    0100111  11222333344678999998764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.21  E-value=0.13  Score=40.81  Aligned_cols=97  Identities=19%  Similarity=0.201  Sum_probs=59.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC------------------------CCCeEEEE-ccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS------------------------EGALELVY-GDVTD   55 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~------------------------~~~~~~~~-~D~~~   55 (229)
                      +|+|.| -|++|++.+++|++.| -++++++.+.=....++.                        ++.++... -|.-+
T Consensus        32 ~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t  110 (263)
T COG1179          32 HVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFIT  110 (263)
T ss_pred             cEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhC
Confidence            688998 5999999999999999 478888775422222111                        12333322 24445


Q ss_pred             hhhHHhhcC-CccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcccee
Q 027007           56 YRSLVDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (229)
Q Consensus        56 ~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~  118 (229)
                      .+.+++++. ++|+||.+-.               |+..-..|+..|.+++    +-++||..+
T Consensus       111 ~en~~~~~~~~~DyvIDaiD---------------~v~~Kv~Li~~c~~~k----i~vIss~Ga  155 (263)
T COG1179         111 EENLEDLLSKGFDYVIDAID---------------SVRAKVALIAYCRRNK----IPVISSMGA  155 (263)
T ss_pred             HhHHHHHhcCCCCEEEEchh---------------hhHHHHHHHHHHHHcC----CCEEeeccc
Confidence            666666655 4888887742               2333456788888774    234455443

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.20  E-value=0.0082  Score=50.03  Aligned_cols=73  Identities=16%  Similarity=0.163  Sum_probs=45.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEcc-CCChhhH-Hhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD-VTDYRSL-VDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D-~~~~~~~-~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|.+|+++++++++.+.+...+.-..+..+ -.+.++. .... +++|+++.+.|
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G  216 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVG  216 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCC
Confidence            689999999999999998888999999998876553333221111122211 1122222 2222 25899998865

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.17  E-value=0.023  Score=48.52  Aligned_cols=68  Identities=21%  Similarity=0.117  Sum_probs=51.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   73 (229)
                      ||+|.| +|..|..+++.+.+.|++|++++.++.......   .-..+..|..|.+.+.++++  ++|+|+...
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh---CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            689999 599999999999999999999998754321110   11345678889999988877  699888654

This enzyme is an alternative to PurN (TIGR00639)

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=96.17  E-value=0.009  Score=49.63  Aligned_cols=37  Identities=27%  Similarity=0.458  Sum_probs=32.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||+|.| +|.||.-++-.|.+.|++|++++|..+..+
T Consensus         3 m~I~IiG-aGaiG~~~a~~L~~~G~~V~lv~r~~~~~~   39 (305)
T PRK05708          3 MTWHILG-AGSLGSLWACRLARAGLPVRLILRDRQRLA   39 (305)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhCCCCeEEEEechHHHH
Confidence            8999999 599999999999999999999999754443

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.16  E-value=0.0083  Score=46.52  Aligned_cols=28  Identities=36%  Similarity=0.551  Sum_probs=26.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVR   28 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~   28 (229)
                      |++.|.||+|.+|+.+++.|.+.|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            8999999999999999999999999986

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.16  E-value=0.0027  Score=52.00  Aligned_cols=69  Identities=16%  Similarity=0.249  Sum_probs=45.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCC--CeEEE-EccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEG--ALELV-YGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~--~~~~~-~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.| +|+.+++++.+|++.| .+++++.|+.++.+++.+.-  ....+ ..+..+.+...    ..|+|||+.+.
T Consensus       128 ~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINaTp~  200 (283)
T COG0169         128 RVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINATPV  200 (283)
T ss_pred             EEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEECCCC
Confidence            588999 5999999999999999 68999999887755543210  00011 11222222211    68999999765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.15  E-value=0.0096  Score=49.05  Aligned_cols=73  Identities=12%  Similarity=0.207  Sum_probs=45.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCC---CCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS---DISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~---~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +++|.|+ |+.+++++..|+..|. +|++++|+.+   +.+.+...    ........++.+.+.+.+.+.++|+|||+.
T Consensus       126 ~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaT  204 (288)
T PRK12749        126 TMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGT  204 (288)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECC
Confidence            6899995 7779999999999985 8999999853   33322210    011111122222223445567899999986


Q ss_pred             cc
Q 027007           74 AL   75 (229)
Q Consensus        74 ~~   75 (229)
                      ..
T Consensus       205 p~  206 (288)
T PRK12749        205 KV  206 (288)
T ss_pred             CC
Confidence            54

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.15  E-value=0.011  Score=48.39  Aligned_cols=100  Identities=20%  Similarity=0.233  Sum_probs=64.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCC--C-hhhHHhhc-CCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT--D-YRSLVDAC-FGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~-~~~d~vi~~a~~~~   77 (229)
                      +|+|++|+|.+|+-..+--.-+|++|+++.-.+++.+-+....++.. -.|-.  | .+.+.+++ +++|+.+-|.|-  
T Consensus       153 tvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~-~idyk~~d~~~~L~~a~P~GIDvyfeNVGg--  229 (340)
T COG2130         153 TVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA-GIDYKAEDFAQALKEACPKGIDVYFENVGG--  229 (340)
T ss_pred             EEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce-eeecCcccHHHHHHHHCCCCeEEEEEcCCc--
Confidence            68999999999999888766789999999988776554333111111 01221  2 23344444 358999988763  


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecC
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGST  122 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~  122 (229)
                                        .+.+++.+..+ ..||+.++-++.|...
T Consensus       230 ------------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         230 ------------------EVLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             ------------------hHHHHHHHhhccccceeeeeehhhcCCC
Confidence                              23344444332 3499999988888765

>PRK07574 formate dehydrogenase; Provisional

Probab=96.15  E-value=0.013  Score=50.28  Aligned_cols=65  Identities=15%  Similarity=0.044  Sum_probs=46.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| .|.||+.+++.|...|++|++.+|.....+...        ..++.-..+++++++.+|+|+.+..
T Consensus       193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~--------~~g~~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ--------ELGLTYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh--------hcCceecCCHHHHhhcCCEEEEcCC
Confidence            5788998 699999999999999999999998752211110        1122223467788899999987764

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.14  E-value=0.0087  Score=48.97  Aligned_cols=35  Identities=37%  Similarity=0.575  Sum_probs=32.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |||-++| .|-+|..++..|+++||+|++.+|++++
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~k   35 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEK   35 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence            6788888 7999999999999999999999999876

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.018  Score=47.43  Aligned_cols=52  Identities=19%  Similarity=0.303  Sum_probs=43.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|.|.|.++.+|+.++..|.++|+.|++..+...                      ++.++.+++|+||-+.|.
T Consensus       161 ~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------~l~e~~~~ADIVIsavg~  212 (301)
T PRK14194        161 HAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------DAKALCRQADIVVAAVGR  212 (301)
T ss_pred             EEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecCC
Confidence            6899999999999999999999999999876531                      345556788999988875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.13  E-value=0.011  Score=49.68  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=45.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCe-EEEEc-cCCCh-hhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYG-DVTDY-RSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~-D~~~~-~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|.+|++++++.++.+.+...-++ +.+.. +-.+. +.+.+.. .++|+++++.|
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g  230 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG  230 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence            689999999999999998888999999988876554332210012 22221 11122 2223322 35899998865

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.13  E-value=0.019  Score=48.93  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=41.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|.|.|++|.||..+++.|.++ +++|++.++..+                ...   +..+.+.++|+||-|..+
T Consensus         5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~----------------~~~---~~~~~v~~aDlVilavPv   61 (370)
T PRK08818          5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP----------------GSL---DPATLLQRADVLIFSAPI   61 (370)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc----------------ccC---CHHHHhcCCCEEEEeCCH
Confidence            48999999999999999999875 789999887421                011   223456788988888653

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.12  E-value=0.0093  Score=52.95  Aligned_cols=36  Identities=25%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      |||.|+| +|-+|+.++..|+..|++|++.++++++.
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~   40 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAE   40 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            5888887 69999999999999999999999987654

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.12  E-value=0.00087  Score=45.49  Aligned_cols=66  Identities=24%  Similarity=0.340  Sum_probs=43.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC---CeEEEE-EcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG---HSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ||.|+| +|-+|.++++.|.+.|   ++|++. +|++++.+++...-.+....      .+..+++++.|+||-+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhhccCCEEEEEEC
Confidence            577785 8999999999999999   999965 88876554432211111111      123344567899998863

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.11  E-value=0.0039  Score=50.65  Aligned_cols=64  Identities=13%  Similarity=0.171  Sum_probs=44.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC----eEEEE-EcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH----SVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.++| .|-+|.++++.|++.|+    +|++. +|++++.+.+... ++..       ..+..++.+++|+||-+.
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~-g~~~-------~~~~~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSL-GVKT-------AASNTEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHc-CCEE-------eCChHHHHhcCCEEEEEE
Confidence            8999998 89999999999999998    88888 7766544332211 2221       112334456789998886

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.11  E-value=0.0036  Score=51.60  Aligned_cols=64  Identities=17%  Similarity=0.181  Sum_probs=43.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|.|+| .|.+|+.+++.|++.|++|++.+|++++.+.+...        ......+..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA--------GAVTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CCcccCCHHHHHhcCCEEEEecC
Confidence            467887 79999999999999999999999987654432211        11112234455667788777653

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.10  E-value=0.012  Score=48.99  Aligned_cols=73  Identities=18%  Similarity=0.215  Sum_probs=46.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC-hhhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~d~vi~~a~   74 (229)
                      ++||+||+|.+|..+++.+...|.+|+++++++++.+.+...+.-+.+..+-.+ .+.+.+.. .++|+++++.|
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            689999999999999998888999999998876543332221111222211111 22233322 35899998865

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN00203 glutamyl-tRNA reductase

Probab=96.09  E-value=0.0038  Score=55.49  Aligned_cols=70  Identities=21%  Similarity=0.386  Sum_probs=49.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+... ++...   .+...++..+++.++|+||.+.+.
T Consensus       268 kVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i---~~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        268 RVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI---IYKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             EEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce---EeecHhhHHHHHhcCCEEEEccCC
Confidence            6899996 9999999999999996 799999987665443321 11111   122344566777899999987653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.09  E-value=0.01  Score=49.98  Aligned_cols=70  Identities=14%  Similarity=0.128  Sum_probs=44.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|+|+ |.+|...++.+...|. +|+++++++++.+.+.+. +.+.+ .|..+  .+++.+.-..+|++|.++|
T Consensus       172 ~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l-Ga~~v-i~~~~~~~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        172 RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM-GADKL-VNPQNDDLDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc-CCcEE-ecCCcccHHHHhccCCCCCEEEECCC
Confidence            6899985 9999999998888897 688888887654433221 22211 12222  2222222224899999876

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=96.06  E-value=0.13  Score=44.75  Aligned_cols=32  Identities=19%  Similarity=0.331  Sum_probs=28.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC------eEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH------SVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~------~V~~~~r~~   34 (229)
                      ||+|.| +|++|.++++.|+..|.      +++++|.+.
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~   38 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDN   38 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCC
Confidence            588998 69999999999999997      788888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.05  E-value=0.0089  Score=49.20  Aligned_cols=37  Identities=19%  Similarity=0.376  Sum_probs=32.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (229)
                      +|.|.|+ |.+|..++..|+++|++|++.+++++.++.
T Consensus         3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   39 (288)
T PRK09260          3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLES   39 (288)
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            6889995 999999999999999999999998765443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.00  E-value=0.024  Score=42.37  Aligned_cols=54  Identities=22%  Similarity=0.338  Sum_probs=40.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ++++|.|.+..+|+.++..|.++|..|+....+.                      .++.+..+++|+||-.+|..
T Consensus        37 k~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------~~l~~~~~~ADIVVsa~G~~   90 (160)
T PF02882_consen   37 KKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------KNLQEITRRADIVVSAVGKP   90 (160)
T ss_dssp             -EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------SSHHHHHTTSSEEEE-SSST
T ss_pred             CEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------CcccceeeeccEEeeeeccc
Confidence            3799999999999999999999999999876542                      23455567899999998863

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.00  E-value=0.011  Score=49.50  Aligned_cols=71  Identities=23%  Similarity=0.309  Sum_probs=45.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC---hhhHHhhcC--CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD---YRSLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~~d~vi~~a~   74 (229)
                      +|||+||+|++|+..++-+...|+.++++..+.++.+.+.....-+.+.  ..+   .+.+.++..  ++|+|+.+.|
T Consensus       145 ~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~--y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         145 TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVIN--YREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEc--CCcccHHHHHHHHcCCCCceEEEECCC
Confidence            7999999999999999988889977666666554444222211112222  222   233444443  5899998875

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.98  E-value=0.0065  Score=50.26  Aligned_cols=37  Identities=27%  Similarity=0.482  Sum_probs=32.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (229)
                      +|.|.| .|.+|.++++.|++.|++|++.+|++++.+.
T Consensus         3 ~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~   39 (296)
T PRK15461          3 AIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDA   39 (296)
T ss_pred             eEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            788888 7999999999999999999999998765443

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.97  E-value=0.014  Score=48.95  Aligned_cols=73  Identities=22%  Similarity=0.254  Sum_probs=45.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeE-EEEccCCC-hhhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALE-LVYGDVTD-YRSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~-~~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|. +|+++++++++.+.+...-+++ .+..+-.+ .+.+.++. +++|+++++.+
T Consensus       157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g  233 (345)
T cd08293         157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVG  233 (345)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCC
Confidence            689999999999999998888898 7999988765433221101122 22211112 12233332 35899998875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.95  E-value=0.011  Score=48.95  Aligned_cols=37  Identities=30%  Similarity=0.565  Sum_probs=33.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |+|.|.| .|-+|+++++.|++.|++|++.+|++++.+
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~   37 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVE   37 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence            8999998 799999999999999999999999875543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.94  E-value=0.02  Score=48.12  Aligned_cols=61  Identities=16%  Similarity=0.190  Sum_probs=45.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| .|.||+++++.|...|++|++.+|+++....        .    +.-..++.++++++|+|+-+..
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~--------~----~~~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        147 MTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD--------F----LTYKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh--------h----hhccCCHHHHHhcCCEEEEeCC
Confidence            5788998 6999999999999999999999987542110        0    1112356778889998887653

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.93  E-value=0.0011  Score=49.53  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=43.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ||.|.| +|-.|.+++..|..+|++|++..|+++..+.+..       .+.... ...+.-..+++++++++|+||-+.
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKL-PENIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCcccEEEecc
Confidence            688999 5999999999999999999999998642221110       011111 101111235566778899888664

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06849 hypothetical protein; Provisional

Probab=95.90  E-value=0.015  Score=50.03  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=32.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |+|||||++..+|..+++.|.+.|++|++++.++.
T Consensus         5 ~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          5 KTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            68999999999999999999999999999988753

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.88  E-value=0.028  Score=47.03  Aligned_cols=71  Identities=17%  Similarity=0.145  Sum_probs=45.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----------CCCe--EEEEccCCChhhHHhhcCCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGAL--ELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~--~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      +|.|.| +|-+|+.++..++..|++|++.+++++..+....          ..+.  ......++-..++.++++++|+|
T Consensus         9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV   87 (321)
T PRK07066          9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI   87 (321)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence            688888 5999999999999999999999998653221100          0000  00001122223456777899999


Q ss_pred             EEeC
Q 027007           70 FHTA   73 (229)
Q Consensus        70 i~~a   73 (229)
                      |-+.
T Consensus        88 iEav   91 (321)
T PRK07066         88 QESA   91 (321)
T ss_pred             EECC
Confidence            9875

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.86  E-value=0.0058  Score=49.65  Aligned_cols=65  Identities=17%  Similarity=0.196  Sum_probs=44.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|.| +|.+|+.+++.|.+.|   ++|++.+|++++.+.+...-++.     +.  .+..++++++|+||-+.
T Consensus         3 m~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-----~~--~~~~~~~~~advVil~v   70 (267)
T PRK11880          3 KKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-----AA--TDNQEAAQEADVVVLAV   70 (267)
T ss_pred             CEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-----ec--CChHHHHhcCCEEEEEc
Confidence            6899998 5999999999999998   78999999865443322210111     11  12333456789888765

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.85  E-value=0.01  Score=46.45  Aligned_cols=67  Identities=15%  Similarity=0.170  Sum_probs=39.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCe-EEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHS-VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|.|.| +|.||..+++.+.+.  +.+ +.+.+|+.++...+...-.    ..+.+   ++.+++.++|.++-+|+.
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~----~~~~s---~ide~~~~~DlvVEaAS~   70 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVG----RRCVS---DIDELIAEVDLVVEAASP   70 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcC----CCccc---cHHHHhhccceeeeeCCH
Confidence            7899998 899999999977543  355 5566777666554322100    11222   233333556666666653

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=95.81  E-value=0.029  Score=48.68  Aligned_cols=110  Identities=10%  Similarity=0.054  Sum_probs=68.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-----CCeEEEEEcC-CCCCCCCCC---------CCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-----GHSVRALVRR-TSDISGLPS---------EGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-----g~~V~~~~r~-~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||.|.||+++-...+++.|+.+     +.++++.|.+ +++++....         ....+     +....+.++++++
T Consensus         1 ~KI~iIGaGS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~~~~~~-----v~~t~d~~~al~g   75 (419)
T cd05296           1 MKLTIIGGGSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKAGLPIK-----VHLTTDRREALEG   75 (419)
T ss_pred             CEEEEECCchHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhhCCCeE-----EEEeCCHHHHhCC
Confidence            89999999999888899988874     3689999988 555432100         01222     2223467888999


Q ss_pred             ccEEEEeCcccCCCCCCchhh--------------------hHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           66 CHVIFHTAALVEPWLPDPSRF--------------------FAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~--------------------~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      +|+||+++.+........++.                    -..|+.....+++.+.+..+...++++|.
T Consensus        76 adfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TN  145 (419)
T cd05296          76 ADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTN  145 (419)
T ss_pred             CCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999987633211111111                    12344455666677777654446666664

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>PLN02928 oxidoreductase family protein

Probab=95.79  E-value=0.031  Score=47.33  Aligned_cols=74  Identities=14%  Similarity=0.156  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC---CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++.|.| .|-||+++++.|...|.+|++.+|...+.....   +...+.-+........++.++++++|+|+.++..
T Consensus       160 ktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lPl  236 (347)
T PLN02928        160 KTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCTL  236 (347)
T ss_pred             CEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCCC
Confidence            3688888 699999999999999999999988643211100   0000000000111456788889999999988753

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.78  E-value=0.0075  Score=51.01  Aligned_cols=73  Identities=19%  Similarity=0.190  Sum_probs=45.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCe-EEEEcc-CCCh-hhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGD-VTDY-RSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~D-~~~~-~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|.+|+++++++++.+.+...-++ ..+..+ -.+. +.+.+.. .++|+++.+.|
T Consensus       161 ~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG  237 (348)
T PLN03154        161 SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVG  237 (348)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCC
Confidence            689999999999999998888999999988776554332110122 222211 1122 2233322 25899998875

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.75  E-value=0.046  Score=40.79  Aligned_cols=30  Identities=20%  Similarity=0.306  Sum_probs=26.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r   32 (229)
                      +|+|.|| |-+|...++.|++.|++|++++.
T Consensus        15 ~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         15 VVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            6889985 99999999999999999998853

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.74  E-value=0.047  Score=46.36  Aligned_cols=71  Identities=17%  Similarity=0.065  Sum_probs=45.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|.| +|.+|..+++.+...|.+|++++.+.++.......-+++.+. |..+.+.+.+....+|++|.+.|
T Consensus       186 ~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g  256 (360)
T PLN02586        186 HLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVS  256 (360)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCC
Confidence            578866 599999999988889999988877655433221111222221 23334455555556899998876

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.73  E-value=0.057  Score=44.46  Aligned_cols=69  Identities=26%  Similarity=0.334  Sum_probs=45.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC--------------------------CCCeEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~D~~   54 (229)
                      ||||.| +|++|+++++.|+..| -+++++|.+.=....+..                          .-.++.+..++.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            689998 6999999999999999 468888775322122111                          113445556665


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                      +.+  .+.++++|+||.+.
T Consensus        80 ~~~--~~f~~~fdvVi~al   96 (291)
T cd01488          80 DKD--EEFYRQFNIIICGL   96 (291)
T ss_pred             chh--HHHhcCCCEEEECC
Confidence            432  35567788888764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.73  E-value=0.017  Score=47.99  Aligned_cols=71  Identities=20%  Similarity=0.109  Sum_probs=46.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|+|.|++|.+|..+++.+...|.+|+++++++++.+.+... ++..+ .|..+  .+.+.+.. .++|.++++.+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKL-GAKEV-IPREELQEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc-CCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence            689999999999999999999999999998887654433211 12111 12122  22333332 24888888764

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.71  E-value=0.012  Score=46.71  Aligned_cols=71  Identities=20%  Similarity=0.288  Sum_probs=45.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcC----CCCCCCCCCC--CCeEEEE-ccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRR----TSDISGLPSE--GALELVY-GDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~---~V~~~~r~----~~~~~~~~~~--~~~~~~~-~D~~~~~~~~~~~~~~d~vi   70 (229)
                      ++++|.|+ |..|+.++..|.+.|.   ++++++|+    .++.+.+...  .-.+... .+. + .++.+.++++|+||
T Consensus        26 ~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~-~-~~l~~~l~~~dvlI  102 (226)
T cd05311          26 VKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKT-G-GTLKEALKGADVFI  102 (226)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcc-c-CCHHHHHhcCCEEE
Confidence            47999996 9999999999999996   59999998    3432211110  0000000 011 1 14545667799999


Q ss_pred             EeCc
Q 027007           71 HTAA   74 (229)
Q Consensus        71 ~~a~   74 (229)
                      ++.+
T Consensus       103 gaT~  106 (226)
T cd05311         103 GVSR  106 (226)
T ss_pred             eCCC
Confidence            9986

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.69  E-value=0.027  Score=43.88  Aligned_cols=66  Identities=17%  Similarity=0.348  Sum_probs=42.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|||.|| |-+|...++.|++.|++|+++++...+ +..+.....+.+.+-+.. .    ..+.++|+||-+.
T Consensus        12 ~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-~----~~l~~adlViaaT   78 (202)
T PRK06718         12 RVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-P----SDIVDAFLVIAAT   78 (202)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-h----hhcCCceEEEEcC
Confidence            7899996 999999999999999999999765321 122222224455443222 1    2246788887553

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.69  E-value=0.087  Score=43.31  Aligned_cols=32  Identities=31%  Similarity=0.473  Sum_probs=27.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~   34 (229)
                      +|||.| .|++|.++++.|+..| .+++++|.+.
T Consensus        21 ~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~   53 (286)
T cd01491          21 NVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKP   53 (286)
T ss_pred             cEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCc
Confidence            689998 6999999999999999 4688888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.68  E-value=0.021  Score=49.48  Aligned_cols=63  Identities=14%  Similarity=0.118  Sum_probs=44.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|+| .|.||+.+++.|...|.+|+++++++.+....... +++     +.+   +.++++++|+||.+.|
T Consensus       214 ~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-G~~-----v~~---l~eal~~aDVVI~aTG  276 (425)
T PRK05476        214 VVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-GFR-----VMT---MEEAAELGDIFVTATG  276 (425)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-CCE-----ecC---HHHHHhCCCEEEECCC
Confidence            688999 58999999999999999999999887553322111 222     222   3455678999987754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.67  E-value=0.055  Score=39.58  Aligned_cols=53  Identities=26%  Similarity=0.325  Sum_probs=43.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      +|+|.|.+.-+|+.++..|.++|..|+...++.                      .++++..+++|+||-..+..
T Consensus        30 ~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t----------------------~~l~~~v~~ADIVvsAtg~~   82 (140)
T cd05212          30 KVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT----------------------IQLQSKVHDADVVVVGSPKP   82 (140)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC----------------------cCHHHHHhhCCEEEEecCCC
Confidence            789999999999999999999999999887542                      13455678899999887753

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.66  E-value=0.009  Score=48.95  Aligned_cols=65  Identities=12%  Similarity=0.195  Sum_probs=43.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCCC-CCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTS-DISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g----~~V~~~~r~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.++| +|-+|.++++.|+++|    ++|++.+|+.+ +.+.+....+++..       .+..++.+++|+||-+.
T Consensus         4 mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~-------~~~~e~~~~aDvVilav   73 (279)
T PRK07679          4 QNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT-------HNKKELLTDANILFLAM   73 (279)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe-------CCHHHHHhcCCEEEEEe
Confidence            7899998 7999999999999998    78998888653 32322111122111       12334456789888775

>PRK00711 D-amino acid dehydrogenase small subunit; Validated

Probab=95.66  E-value=0.021  Score=49.33  Aligned_cols=33  Identities=30%  Similarity=0.547  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+|+|| |.+|..+|.+|+++|++|+++++..
T Consensus         1 ~~v~IVG~-Gi~Gls~A~~l~~~g~~V~vle~~~   33 (416)
T PRK00711          1 MRVVVLGS-GVIGVTSAWYLAQAGHEVTVIDRQP   33 (416)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            89999995 9999999999999999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	229
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		6e-12
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		3e-11
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		1e-10
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-10
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		4e-08
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		4e-07
4f6l_B	508	Crystal Structure Of Aureusimine Biosynthetic Clust		4e-06
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		8e-06
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		8e-06
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-05
4f6c_A	427	Crystal Structure Of Aureusimine Biosynthetic Clust		1e-04
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		3e-04
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		3e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		5e-04
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		6e-04
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		8e-04
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		8e-04
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		9e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ D
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD 67
Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      +EG+  ++++    KTV ++++TS
Sbjct: 68  EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127
Query: 115 SFFALGSTDGYI--------ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVP 165
           S   +   +  +        +D      +K     Y  SK +A++ A + A E  +  + 
Sbjct: 128 SAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFIT 187
Query: 166 VYPGVIYGP 174
           + P ++ GP
Sbjct: 188 IIPTLVVGP 196

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPS-EGALELVY---GDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R    R  D+S L +  GA E ++    D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122
Query: 113 TSSFFAL--GSTDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQ-AASEGLPI 163
           TSS  A+     D  + DE+       +   K F   Y  SK +A+K  L+     G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182
Query: 164 VPVYPGVIYG 173
           V +    I G
Sbjct: 183 VTLILPFIVG 192

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G++   L   LL++G++V   VR      + S +  L   G L++   D+TD  S
Sbjct: 14  VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELS 73
Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC  +FH A  V     DP        ++G+ NV++A    K+V+++I TSS  
Sbjct: 74  FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA 133
Query: 118 ALGSTD----GYIADENQVHEEKYFCTQ------YERSKAVADKIALQAASE-GLPIVPV 166
           A+        G + DE    + ++  +       Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193
Query: 167 YPGVIYG 173
            P ++ G
Sbjct: 194 IPTLMAG 200

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G++G +G  +  AL  QG +VR    R S   G       E V G + D ++L DA
Sbjct: 22  ILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGG-------EEVVGSLEDGQALSDA 74
Query: 63  CFGCHVIFHTAALVEPWLP-DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             G   + H  A +  W P D  R FAVNVEG + ++ AA     V + ++ SS
Sbjct: 75  IMGVSAVLHLGAFMS-WAPADRDRMFAVNVEGTRRLLDAAS-AAGVRRFVFASS 126

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSV---RALVRR--TSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ + 
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 57  RSLV--------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +         D+CF  H+    A      + +P   F +NV G  N+++A ++  +  
Sbjct: 63  NDVTRLITKYMPDSCF--HLAGQVAMTTS--IDNPCMDFEINVGGTLNLLEAVRQYNSNC 118
Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ----------------YERSKAVADKI 152
            IIY+S+    G  + Y  +E    E +Y C                  Y  SK  AD+ 
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNET---ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQY 175
Query: 153 ALQAASE-GLPIVPVYPGVIYGPGKLTT 179
            L  A   GL  V      +YG  +  T
Sbjct: 176 MLDYARIFGLNTVVFRHSSMYGGRQFAT 203

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRAL-------VRRTSDISGLPSE---GALELVYGDV 53
           L++G +G++G  L   LLK    V  L        R   ++  L SE      + + GD+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+   
Sbjct: 91  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFT 149
Query: 112 YTSSFFALGSTDGYIADENQVHE--EKYFCTQY 142
           Y +S    G   G    E+ + +    Y  T+Y
Sbjct: 150 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY 182

>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E++  ++
Sbjct: 154 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI 213
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+  + D         I H  A  + +  D   F  VNV+G  +V++ A++    
Sbjct: 214 EVIVGDFECMDDVVLPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQHHA- 271
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 272 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLD 329
Query: 163 IVPVYPGVIYGP 174
              V  G +  P
Sbjct: 330 GRIVRVGNLTSP 341

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE--------LVYGDV 53
           +IL+ GA+GY+G  +  A L  GH    LVR ++  S       LE        +V+G +
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            D+ SLV+A     V+  T               ++ +E   N+++A KE  TV++
Sbjct: 66  DDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTVKR 108

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           M+IL++G +G LG  L    L QGH +  +    T     LP    L ++ G VTD   L
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLL 80
Query: 60  ---VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKE 103
               D+    HV+   AA  +P  W  D     A NV+G  NV +AA +
Sbjct: 81  ERAFDSFKPTHVVHSAAAYKDPDDWAED----AATNVQGSINVAKAASK 125

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +     DI    + G+ EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DIVQRDTGGSAELHVRDLKDYSW-- 53
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 54  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 112
Query: 119 LGSTD 123
            G  D
Sbjct: 113 YGDAD 117

>pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E    ++
Sbjct: 73  LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLXTNLNDYFSEETVEXXLSNI 132
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+    D         I H  A  + +  D   F  VNV+G  +V++ A++    
Sbjct: 133 EVIVGDFECXDDVVLPENXDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQHHA- 190
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 191 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLD 248
Query: 163 IVPVYPGVIYGP 174
              V  G +  P
Sbjct: 249 GRIVRVGNLTSP 260

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +   +S      +  A EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSA-ELHVRDLKDYSW-- 57
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 58  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 116
Query: 119 LGSTD 123
            G  D
Sbjct: 117 YGDAD 121

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGH------SVRALVRRT-----SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +       V  L   T     ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 50  YGDVTDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H AA   V+  +   S F   NV+G + ++Q A +   V
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-V 119
Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA 153
            ++++ S+    GS D     E+   E     + Y  SKA +D +A
Sbjct: 120 GRVVHVSTNQVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVA 162

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGH------SVRALVRRT-----SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +       V  L   T     ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 50  YGDVTDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H AA   V+  +   S F   NV+G + ++Q A +   V
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-V 119
Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA 153
            ++++ S+    GS D     E+   E     + Y  SKA +D +A
Sbjct: 120 GRVVHVSTDEVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVA 162

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGST 122
            I++SS    G  
Sbjct: 119 FIFSSSATVYGDN 131

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGST 122
            I++SS    G  
Sbjct: 119 FIFSSSATVYGDN 131

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	229
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-71
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-41
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	6e-33
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-32
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	8e-32
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-31
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-30
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	6e-27
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-27
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-25
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-25
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-25
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-23
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-22
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-22
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	4e-22
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	5e-22
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-21
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	3e-21
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	4e-21
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-21
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	9e-21
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-19
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-19
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	5e-19
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-19
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-18
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-18
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	5e-18
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	5e-18
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	6e-18
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	6e-18
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	6e-18
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	7e-18
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	7e-18
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	7e-18
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	6e-17
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	7e-17
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-16
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	4e-16
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	5e-16
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	7e-16
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-15
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-14
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-14
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-13
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-13
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	2e-13
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	1e-12
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	3e-12
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	8e-12
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-11
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	4e-11
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-10
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	3e-10
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	6e-10
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-10
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	8e-10
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-09
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	2e-09
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	6e-09
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	1e-08
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-08
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	2e-08
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	2e-08
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	6e-08
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-07
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-06
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	3e-06
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-05
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	4e-05
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-05
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	7e-05
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	1e-04
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-04
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-04

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  219 bits (560), Expect = 4e-71
 Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 6/195 (3%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +K  V GA+G LG     A+   GH +  + R +S I  L      E    ++ D+  L 
Sbjct: 14  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE-PECRVAEMLDHAGLE 72

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +  +A              A  +        A  + + V +I+Y  S +A+ 
Sbjct: 73  RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMP 131

Query: 121 -STDGYIADENQVHEE-KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--K 176
               G    E   ++      + Y   K   D+ A + A  GLP+V   PG++ G     
Sbjct: 132 RHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIG 191

Query: 177 LTTGNLVAKLQWKKV 191
            TTG ++  +   ++
Sbjct: 192 PTTGRVITAIGNGEM 206

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  138 bits (350), Expect = 5e-41
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 14/187 (7%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI++ GASG++G  L +  L +G  V A+VR    I        L++   DV+    + 
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKADVSSLDEVC 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           + C G   +            +    +   ++    ++   K+   V + +      +L 
Sbjct: 63  EVCKGADAVISAFNPG----WNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLF 117

Query: 121 STDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT 178
              G  + D  +V E           KA+ +        E  +  V   P     PG  T
Sbjct: 118 IAPGLRLMDSGEVPENILP-----GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT 172

Query: 179 TGNLVAK 185
               + K
Sbjct: 173 GRYRLGK 179

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  120 bits (303), Expect = 6e-33
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 39/238 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPS-EGA---LELVYGDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R   +    +S L +  GA   L     D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122

Query: 113 TSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPI 163
           TSS  A+     D  + DE      + +   K F   Y  SK +A+K  L+     G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182

Query: 164 VPVYPGVIYGPG-------------KLTTGN--LVAKLQWKKVDLVKD-----IFLLE 201
           V +    I G                L  G    +   ++  V  V D     I+LLE
Sbjct: 183 VTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVH-VDDVARAHIYLLE 239

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  119 bits (300), Expect = 2e-32
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
              V G +G++   L   LL++G++V   VR   +         L   G L++   D+TD
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTD 70

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKIIY 112
             S      GC  +FH A  V     DP       A+   G+ NV++A    K+V+++I 
Sbjct: 71  ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQ--GVVNVMKACTRAKSVKRVIL 128

Query: 113 TSSFFALGST----DGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGL 161
           TSS  A+        G + DE        +   K     Y  SK +A+K A + A    +
Sbjct: 129 TSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNI 188

Query: 162 PIVPVYPGVIYGP 174
            ++ V P ++ G 
Sbjct: 189 DLITVIPTLMAGS 201

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  117 bits (296), Expect = 8e-32
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 47/242 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVT 54
            + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ 
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKII 111
           D  S  +A  GC  +FH A  ++    DP        +   G+  ++++    KTV +++
Sbjct: 67  DEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIE--GMLGIMKSCAAAKTVRRLV 124

Query: 112 YTSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQAASE-GLP 162
           +TSS   +        + DE           +K     Y  SK +A++ A + A E  + 
Sbjct: 125 FTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNID 184

Query: 163 IVPVYPGVIYGP------------------GKLTTGNLVAKLQWKKVDLVKD-----IFL 199
            + + P ++ GP                  G     +++ + Q+  V  + D     I+L
Sbjct: 185 FITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQF--VH-LDDLCNAHIYL 241

Query: 200 LE 201
            E
Sbjct: 242 FE 243

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  113 bits (286), Expect = 2e-31
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M++LV GA+G +   L   L  +GH   A+VR       L   GA ++V  ++ +     
Sbjct: 22  MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEE--DFS 79

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      +   A           +   +++ G    +Q A++   +++ I  SS   + 
Sbjct: 80  HAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD 136

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
              G +   +           Y  +K +AD   L+ +   L    V PG +  
Sbjct: 137 PDQGPMNMRH-----------YLVAKRLADD-ELKRS--SLDYTIVRPGPLSN 175

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  112 bits (281), Expect = 8e-31
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 23/184 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSL 59
           MKI + G++G +G  L  +L    + + A  R+   +        ++ V+ DV      +
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYN---NVKAVHFDVDWTPEEM 57

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                G   I + +               V++ G   ++QAA++ + V++ I  S+ F+L
Sbjct: 58  AKQLHGMDAIINVSG------SGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY---GPGK 176
                  A  + + +       Y  +K  AD   L   +  L    + PG +      G 
Sbjct: 111 QPEKWIGAGFDALKD-------YYIAKHFADL-YLTKET-NLDYTIIQPGALTEEEATGL 161

Query: 177 LTTG 180
           +   
Sbjct: 162 IDIN 165

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  108 bits (273), Expect = 9e-30
 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 7/137 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +           P       V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKY 137
                      V ++  
Sbjct: 117 DPTKVPPRLQAVTDDHI 133

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  104 bits (262), Expect = 6e-27
 Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 28/200 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVY-GDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++           G  E     D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  +   G   + H A++V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVV-SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFAL----GSTDGYIADE-------------NQVHEEKYFCTQYERSKAVADKIALQAA 157
           S  +      + +G   DE                 + +     Y  SK  A+  A +  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 158 SE---GLPIVPVYPGVIYGP 174
            E      +  V P    G 
Sbjct: 192 DENKPHFTLNAVLPNYTIGT 211

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  102 bits (257), Expect = 9e-27
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G +G  +   L    H VR             +E   E+V  D+ D +++ D
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG----AAEAHEEIVACDLADAQAVHD 59

Query: 62  ACFGCHVIFHTAAL-VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               C  I H   + VE    D       N+ G  N+ +AA+      +I++ SS   +G
Sbjct: 60  LVKDCDGIIHLGGVSVERPWNDI---LQANIIGAYNLYEAARNLG-KPRIVFASSNHTIG 115

Query: 121 STDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
                   D             Y  SK   + +A        +  + +  G  +  
Sbjct: 116 YYPRTTRIDTEVPRRPDSL---YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK 168

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 99.5 bits (248), Expect = 1e-25
 Identities = 40/192 (20%), Positives = 62/192 (32%), Gaps = 32/192 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             +LV+GASG  G  +   L +       + LVR       +  E   ++  GD+TD  S
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62

Query: 59  LVDACFGCHVIFHTAALV---------------EPWLPDPSRFFAVNVEGLKNVVQAAKE 103
           +  A  G   +    + V               E    D      V+  G KN + AAK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
              V+ I+   S   +G               K         K  A++  L  +  G P 
Sbjct: 123 AG-VKHIVVVGS---MG------GTNPDHPLNKLGNGNILVWKRKAEQ-YLADS--GTPY 169

Query: 164 VPVYPGVIYGPG 175
             +  G +    
Sbjct: 170 TIIRAGGLLDKE 181

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 99.4 bits (248), Expect = 1e-25
 Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G LG  +   L      +R       D    P+    E V  D+ D  ++  
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD----PAGPNEECVQCDLADANAVNA 60

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
              GC  I H             +    N+ GL N+ +AA+      +I++ SS      
Sbjct: 61  MVAGCDGIVHLGG--ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASS----NH 113

Query: 122 TDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
           T GY     ++  +        Y  SK   + +A       G     V  G     
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPE 169

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 98.1 bits (244), Expect = 2e-25
 Identities = 31/180 (17%), Positives = 67/180 (37%), Gaps = 17/180 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GA+G  G R+      +GH V A+VR    I+       + ++  D+ D    +
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFD--LTL 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 +V+     +              +V  L +++     T    +++      +L 
Sbjct: 57  SDLSDQNVVVDAYGI-------SPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQ 108

Query: 121 STD--GYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             +    + +   + E  Y+ T   ++K +     L++         + P  ++ PG+ T
Sbjct: 109 IDEDGNTLLESKGLREAPYYPTARAQAKQLE---HLKSHQAEFSWTYISPSAMFEPGERT 165

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 92.6 bits (230), Expect = 3e-23
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 23/174 (13%)

Query: 1   MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
             +L+ GA G +   + + L  KQ        R+ + I       + +++ GDV ++ +L
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLNHAAL 82

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G  +++                         +V+ A K    V+++I+  S    
Sbjct: 83  KQAMQGQDIVYANLT------------GEDLDIQANSVIAAMKACD-VKRLIFVLSLGIY 129

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
               G   + N     +       +    A    ++A+  GL    + P  +  
Sbjct: 130 DEVPGKFVEWNNAVIGEPL-----KPFRRAADA-IEAS--GLEYTILRPAWLTD 175

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 90.5 bits (224), Expect = 2e-22
 Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 10/178 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI V GA+G  G  +     ++GH V A+VR     +                      
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV---ATLVKEPLVLTE 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                   +    +     +P  S    ++++   ++V   + +     +    S     
Sbjct: 58  ADLDSVDAVVDALS-----VPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAM 111

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
               +    +                   +   LQ  +  +  + + P   +  G  T
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA-NVNWIGISPSEAFPSGPAT 168

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 91.6 bits (228), Expect = 3e-22
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 21/187 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L   L ++      +    SDI    + G ++ +  DV++   +  A
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SDIVQRDTGG-IKFITLDVSNRDEIDRA 57

Query: 63  C--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              +    IFH A ++    E    DP+  + VN+ G  N+++AAK+ + VEK++  S+ 
Sbjct: 58  VEKYSIDAIFHLAGILSAKGE---KDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTI 113

Query: 117 FALGSTDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGVIYG 173
              G            +   +   T +  +K  A+ +      + GL +  + YPG+   
Sbjct: 114 GVFGPETPKNKVPSITITRPR---TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI-IS 169

Query: 174 PGKLTTG 180
                T 
Sbjct: 170 YKAEPTA 176

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 12/175 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI V+G +G+LG  +  ++   G++   L        G  +    E    D T    L+
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILT----RSIGNKAINDYEYRVSDYTL-EDLI 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           +       + H AA            F  N    +N+  A  E   +  I+Y S+  A  
Sbjct: 58  NQLNDVDAVVHLAATRG--SQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYS 114

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
                  +E ++         Y  SK   + I    + + GL I  +    +YG 
Sbjct: 115 DETSLPWNEKELPLPDLM---YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF 166

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 91.6 bits (228), Expect = 5e-22
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD--ISG----LPSEGALELVYGDV 53
             ++V G +G++G  L   LL+ G + V  +     D  +S     +P   A+      +
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVV-----DNLLSAEKINVPDHPAVRFSETSI 87

Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           TD   L         +FH A     +  + DP      N      + +  K  K ++K++
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFC---TQYERSKAVADKIALQ-AASEGLPIVPVY 167
           Y+++  ++       A   +  +        + Y  SK   +  ++       LP V   
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRAR 207

Query: 168 PGVIYGP 174
              +YGP
Sbjct: 208 FQNVYGP 214

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 88.6 bits (220), Expect = 2e-21
 Identities = 39/176 (22%), Positives = 62/176 (35%), Gaps = 19/176 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KIL++G  G LG  L   L  QGH V  L R    +      G  + +  DVT   +L 
Sbjct: 4   SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPM----PAGV-QTLIADVTRPDTLA 57

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                   ++ +  A           +    VEGL+N + A +    ++ + + SS    
Sbjct: 58  SIVHLRPEILVYCVA---ASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVY 113

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           G       DE+          +    K + +    +A         +    IYGPG
Sbjct: 114 GQEVEEWLDEDTPPI-----AKDFSGKRMLE---AEALLAAYSSTILRFSGIYGPG 161

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 89.4 bits (222), Expect = 3e-21
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 29/196 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-------HSVRAL-VRRTSDISGLPSEGALELVYGD 52
           M I + GA+G +G +L   L+K G            + V +    +G    GA++    D
Sbjct: 15  MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFS--GAVDARAAD 72

Query: 53  VTDYRSLVDACF--GCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKE--- 103
           ++      +        VIFH AA+V    E    D  + + +N++G + +  A +    
Sbjct: 73  LSA-PGEAEKLVEARPDVIFHLAAIVSGEAE---LDFDKGYRINLDGTRYLFDAIRIANG 128

Query: 104 -TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GL 161
                 ++++TSS    G+   Y   +          T Y   KA+ + +    +     
Sbjct: 129 KDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL---TSYGTQKAICELLLSDYSRRGFF 185

Query: 162 PIVPV-YPGVIYGPGK 176
             + +  P +   PGK
Sbjct: 186 DGIGIRLPTICIRPGK 201

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 88.4 bits (219), Expect = 4e-21
 Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 37/181 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISGLPSEGALELVYGD 52
           +IL+ GA+GY+G  +  A L  GH    LVR ++          +    + GA  +V+G 
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGS 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ SLV+A     V+  T               ++ +E   N+++A KE  TV K  +
Sbjct: 65  IDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTV-KRFF 110

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +     V E K           V   I     +EG+P   V      
Sbjct: 111 PSEFGNDVDNVHAVEPAKSVFEVK---------AKVRRAI----EAEGIPYTYVSSNCFA 157

Query: 173 G 173
           G
Sbjct: 158 G 158

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 89.0 bits (220), Expect = 5e-21
 Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 13/194 (6%)

Query: 4   LVSGASGYLGGRLCHALLKQGHS-----VRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
           L+ G +G +G  L   L           V  + RRT        +  +  V  D++D   
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRP--AWHEDNPINYVQCDISDPDD 62

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFF 117
                     + H   +              N +  +NV+ A       ++ I   +   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 118 A---LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ--AASEGLPIVPVYPGVIY 172
                  + G I   +  + E     +Y       + I L+     EGL      PG I+
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 182

Query: 173 GPGKLTTGNLVAKL 186
           G    +  NLV  L
Sbjct: 183 GFSPYSMMNLVGTL 196

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 88.1 bits (219), Expect = 9e-21
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +         + + G
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 88

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+ 
Sbjct: 89  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQS 147

Query: 110 IIYTSS 115
             Y +S
Sbjct: 148 FTYAAS 153

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +           + G
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG 86

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ D  +      G   + H AAL  V   + DP    A N+ G  N++ AAK  + V+ 
Sbjct: 87  DIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQS 145

Query: 110 IIYTSS 115
             Y +S
Sbjct: 146 FTYAAS 151

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M+I+V+G +G++G  L   L++ G+ V  +     D   SG       + EL   D+ DY
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DNLSSGRREFVNPSAELHVRDLKDY 55

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                A     V+FH AA   V     +P   F  NV    NV++ A++T  V  +++ S
Sbjct: 56  SWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFAS 112

Query: 115 S 115
           S
Sbjct: 113 S 113

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 17/124 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGALELVYGDVT 54
            K+ ++G  G +G  +   LL++G  V  +     D         L     L  V G + 
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKVVGI-----DNFATGRREHLKDHPNLTFVEGSIA 76

Query: 55  DYRSLVDACFGCH--VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           D+  +           + HTAA  + P   D       N  G  NVVQAAK+   V + +
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKDPD--DWYNDTLTNCVGGSNVVQAAKKNN-VGRFV 133

Query: 112 YTSS 115
           Y  +
Sbjct: 134 YFQT 137

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 82.6 bits (205), Expect = 5e-19
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
             I+V+G +G++G  +   L +  + +  +     D   SG       A  LV  D+   
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSE-SNEIVVI-----DNLSSGNEEFVNEAARLVKADLAA- 54

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             + D   G   ++H AA   V     +P   +  NV     +++A ++   V +I++TS
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTS 113

Query: 115 S 115
           +
Sbjct: 114 T 114

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 83.8 bits (207), Expect = 6e-19
 Identities = 45/217 (20%), Positives = 74/217 (34%), Gaps = 47/217 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISG-------LPSEGA------- 45
           +L++GA+G+LG  L   LL++      +  LVR  SD            S          
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK 135

Query: 46  ------LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN 90
                 LE+V GD +          +R L +      +I  +AA+V    P     F  N
Sbjct: 136 ELAADRLEVVAGDKSEPDLGLDQPMWRRLAET---VDLIVDSAAMVN-AFP-YHELFGPN 190

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--------EKYFCTQY 142
           V G   +++ A  TK      Y S+     + +     E+            +  +   Y
Sbjct: 191 VAGTAELIRIALTTKLK-PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 143 ERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT 178
             SK   + +  +A     LP+     G+I       
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA 286

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 11/136 (8%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M I+++GA+G+LG  + +  +          VR    +          +   D  +  S+
Sbjct: 1   MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-SVRQLDYFNQESM 59

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V+A  G   +      +   +    +     +  ++N+V AAK++  V  II+   +   
Sbjct: 60  VEAFKGMDTVV----FIPSIIHPSFK----RIPEVENLVYAAKQSG-VAHIIFIGYYADQ 110

Query: 120 GSTDGYIADENQVHEE 135
            +   +++        
Sbjct: 111 HNNPFHMSPYFGYASR 126

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 33/205 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGDV 53
           ++L+ G +GY+G R+ +A +  GH    L R            +      GA +L+   +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASL 64

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+    A             + ++     +V+A KE   +++ + +
Sbjct: 65  DDHQRLVDALKQVDVVISALA---------GGVLSHHILEQLKLVEAIKEAGNIKRFLPS 115

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                      +  D + +       +     K    K+     +  +P   V   +  G
Sbjct: 116 E----------FGMDPDIMEHALQPGSITFIDKR---KVRRAIEAASIPYTYVSSNMFAG 162

Query: 174 --PGKLTTGNLVAKLQWKKVDLVKD 196
              G L   +        KV +  D
Sbjct: 163 YFAGSLAQLDGHMMPPRDKVLIYGD 187

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 30/192 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSL 59
            K+L+ G +G++G  L   +L+        +  +T  +  L     +    GD+T  +  
Sbjct: 25  KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEW 84

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           V+     C VI    A+  P  ++  P R F ++ E    +V++A +      +++    
Sbjct: 85  VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK--HLVFP--- 139

Query: 117 FALGSTD---GYIADENQVHE--EKYF---------CTQYERSKAVADKIALQAASEGLP 162
               ST    G  ADE Q                     Y  SK + D++      EGL 
Sbjct: 140 ----STSEVYGMCADE-QFDPDASALTYGPINKPRWI--YACSKQLMDRVIWGYGMEGLN 192

Query: 163 IVPVYPGVIYGP 174
                P    GP
Sbjct: 193 FTLFRPFNWIGP 204

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 80.6 bits (199), Expect = 5e-18
 Identities = 43/217 (19%), Positives = 67/217 (30%), Gaps = 50/217 (23%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLV 60
           I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L+
Sbjct: 8   IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 67

Query: 61  DACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           D  F G H+ F    +                   K++  AAK   T++  IY+S    +
Sbjct: 68  DTLFEGAHLAF----INTTSQAGDEIAIG------KDLADAAKRAGTIQHYIYSS----M 113

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG---------- 169
                Y           +        K   +   ++    GLP   VY G          
Sbjct: 114 PDHSLY---------GPWPAVPMWAPKFTVEN-YVRQL--GLPSTFVYAGIYNNNFTSLP 161

Query: 170 -VIYGPGKLTTGNLV--------AKLQWKKVDLVKDI 197
             ++    +  G             L W  +D   D+
Sbjct: 162 YPLFQMELMPDGTFEWHAPFDPDIPLPW--LDAEHDV 196

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 79.9 bits (198), Expect = 5e-18
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 17/124 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGALELVYGDVTDYR 57
           M+IL++G +G LG  L    L QGH +         T     LP    L ++ G VTD  
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA--TGKREVLPPVAGLSVIEGSVTD-A 77

Query: 58  SLVDACFGCH---VIFHTAAL---VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            L++  F       + H+AA     +    D +   A NV+G  NV +AA +   V++++
Sbjct: 78  GLLERAFDSFKPTHVVHSAAAYKDPD----DWAEDAATNVQGSINVAKAASKAG-VKRLL 132

Query: 112 YTSS 115
              +
Sbjct: 133 NFQT 136

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 80.4 bits (198), Expect = 6e-18
 Identities = 30/177 (16%), Positives = 50/177 (28%), Gaps = 42/177 (23%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M I+++GA G++G  L   L                                 T    L 
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHI-------------------FEVHRQTKEEELE 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      I H A +          F   NV  L +V+           I+ +SS     
Sbjct: 42  SALLKADFIVHLAGV--NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS----- 94

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGVIYGPG 175
                      +   +     Y  SK   +++  + A E G  +    +P + +G  
Sbjct: 95  -----------IQATQD--NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNL-FGKW 137

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 79.9 bits (198), Expect = 6e-18
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +IL++G +G++GG L  AL+  G  V  L         +P EG  + +   V +     
Sbjct: 8   HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVP-PMIPPEGTGKFLEKPVLEL--EE 64

Query: 61  DACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                  +++H A+   V      P   +  NV+  ++++        V K++  S+
Sbjct: 65  RDLSDVRLVYHLASHKSVPRSFKQP-LDYLDNVDSGRHLLALCTSVG-VPKVVVGST 119

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 78.1 bits (192), Expect = 6e-18
 Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
            I + GA+G +   L   LL      +    R+              + ++ G   +   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A     V+F  A                +   + ++V+A      + ++I  S    
Sbjct: 67  LEQAVTNAEVVFVGA--------------MESGSDMASIVKALSRXN-IRRVIGVSMAGL 111

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
            G     +               Y + +  A  +        L    +    +Y   + T
Sbjct: 112 SGEFPVALEKWT----FDNLPISYVQGERQARNV---LRESNLNYTILRLTWLYNDPEXT 164

Query: 179 TGNLVAKLQWKK 190
              L+ +     
Sbjct: 165 DYELIPEGAQFN 176

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 79.5 bits (196), Expect = 7e-18
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 36/181 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL---------ELVYGD 52
           KIL+ G +G +G  +  A +K G+   ALVR+T   +   ++  L          L+ GD
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ +LV A     ++   A               + +E    +++A KE   V K  +
Sbjct: 64  INDHETLVKAIKQVDIVICAAG-------------RLLIEDQVKIIKAIKEAGNV-KKFF 109

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +    QV EEK          ++   I     +EG+P   +      
Sbjct: 110 PSEFGLDVDRHDAVEPVRQVFEEK---------ASIRRVI----EAEGVPYTYLCCHAFT 156

Query: 173 G 173
           G
Sbjct: 157 G 157

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 79.6 bits (196), Expect = 7e-18
 Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 32/176 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDVTDYR 57
           KIL+ G +GY+G  +    LK GH      R  S     +    S GA  +V G++ ++ 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA-IIVKGELDEHE 71

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
            LV+      V+    A                +     +++A K    +++ + +    
Sbjct: 72  KLVELMKKVDVVISALA-------------FPQILDQFKILEAIKVAGNIKRFLPSD--- 115

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                  +  +E++++    F    ER + +   I        +P   V       
Sbjct: 116 -------FGVEEDRINALPPFEALIERKRMIRRAI----EEANIPYTYVSANCFAS 160

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 79.2 bits (196), Expect = 7e-18
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 12/130 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             I V+GA+G LGG +   LLK+     + A+VR     S L  +G  E+ +GD     S
Sbjct: 1   FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV-EVRHGDYNQPES 59

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A  G   +      +     D +      +    NVV+AA++   V+ I YT   FA
Sbjct: 60  LQKAFAGVSKLL----FISGPHYDNTL----LIVQHANVVKAARDAG-VKHIAYTGYAFA 110

Query: 119 LGSTDGYIAD 128
             S       
Sbjct: 111 EESIIPLAHV 120

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 76.8 bits (190), Expect = 6e-17
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M++LV+G +G++G  +   LL +G  V  L     D   +G        +     D+ D 
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLARGLEVAVL-----DNLATGKRENVPKGVPFFRVDLRDK 55

Query: 57  RSLVDACFGCH--VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +  A        + H AA       VE    DP   F VN+ G  N+++A ++   VE
Sbjct: 56  EGVERAFREFRPTHVSHQAAQASVKVSVE----DPVLDFEVNLLGGLNLLEACRQYG-VE 110

Query: 109 KIIYTSSFFA 118
           K+++ S+  A
Sbjct: 111 KLVFASTGGA 120

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 76.9 bits (189), Expect = 7e-17
 Identities = 24/181 (13%), Positives = 58/181 (32%), Gaps = 37/181 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---------GLPSEGALELVYGD 52
           KI++ G +GY+G  +  A L   H      R  +  S            S G   ++ G+
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV-TIIEGE 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + ++  +V       ++                     +    +++ A K    +++ + 
Sbjct: 65  MEEHEKMVSVLKQVDIVISALP-------------FPMISSQIHIINAIKAAGNIKRFLP 111

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
           +           +  +E+++     F +  E+ + +   I     +  LP   V      
Sbjct: 112 SD----------FGCEEDRIKPLPPFESVLEKKRIIRRAI----EAAALPYTYVSANCFG 157

Query: 173 G 173
            
Sbjct: 158 A 158

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 75.9 bits (187), Expect = 1e-16
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 11/128 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
           ++V G +G  GG +   LL+ G   VR + R     +   L  +GA E+V GD  D   +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-EVVQGDQDDQVIM 66

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G +  F    +   W           V+  K +   A+    +  ++Y+      
Sbjct: 67  ELALNGAYATF---IVTNYWESCSQ---EQEVKQGKLLADLARRL-GLHYVVYSGLENIK 119

Query: 120 GSTDGYIA 127
             T G +A
Sbjct: 120 KLTAGRLA 127

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 74.7 bits (184), Expect = 4e-16
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           ++     C V+    A+  P  +  +P R F ++ E    +++   + +   +II+ S
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK--RIIFPS 116

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 74.7 bits (183), Expect = 5e-16
 Identities = 26/179 (14%), Positives = 59/179 (32%), Gaps = 33/179 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVT 54
           ++L++GA+G++G  +  A L        L R              L  +GA  +VYG + 
Sbjct: 12  RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA-IIVYGLIN 70

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +  ++        +    + +              ++     +V+A K   T+++ + + 
Sbjct: 71  EQEAMEKILKEHEIDIVVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLPSE 119

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                     +  D N+    +     Y   + V   +       G+P   +    I  
Sbjct: 120 ----------FGHDVNRADPVEPGLNMYREKRRVRQLV----EESGIPFTYICCNSIAS 164

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 74.3 bits (183), Expect = 7e-16
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSL 59
           +KI ++GA G++   +   L  +GH V A   ++   ++        E    D+    + 
Sbjct: 30  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--MFCDEFHLVDLRVMENC 87

Query: 60  VDACFGCHVIFHTAALVEP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           +    G   +F+ AA +        + S     N     N+++AA+    +++  Y SS
Sbjct: 88  LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASS 145

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 14/128 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           I ++GA+G LG  +  +L+K      + A+VR  +    L ++G   +   D  D  +L 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI-TVRQADYGDEAALT 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +     L+       S          +NV+ AAK    V+ I YTS   A  
Sbjct: 61  SALQGVEKLL----LI------SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT 109

Query: 121 STDGYIAD 128
           S  G   +
Sbjct: 110 SPLGLADE 117

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 69.5 bits (170), Expect = 1e-14
 Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 23/178 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             + + GASG  G  L   +L+QG    V  + RR        +   +     D      
Sbjct: 19  KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDD 77

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
              A  G  V F               F  V+ + +    + AK     +     SS  A
Sbjct: 78  YASAFQGHDVGFCCLG-TTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA 135

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK 176
             S++                  Y + K   +    +   +   +    PGV+    +
Sbjct: 136 DKSSNFL----------------YLQVKGEVEAKVEELKFDRYSV--FRPGVLLCDRQ 175

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 20/190 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSE--GALELVYGDVTDYR 57
            KIL+ GA G +G  L   L K  G     ++   SDI  L ++   +      +  D+ 
Sbjct: 3   PKILIIGACGQIGTELTQKLRKLYGTEN--VI--ASDIRKLNTDVVNSGPFEVVNALDFN 58

Query: 58  SLVDACFGCH---VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            + +     H    I+  AAL+      +P+  + +N+  L +V+  AK  K ++KI + 
Sbjct: 59  QI-EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWP 116

Query: 114 SSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGV 170
           SS    G +T      +  + E     T Y  SK   ++      +  G+ +  + YPG+
Sbjct: 117 SSIAVFGPTTPKENTPQYTIMEPS---TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGL 173

Query: 171 IYGPGKLTTG 180
                    G
Sbjct: 174 -ISWSTPPGG 182

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 36/197 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRAL-------------VRRTSDISGLPSEGA 45
             IL++G +G++G  L     +      V  L                      L     
Sbjct: 11  QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG 70

Query: 46  LELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET 104
            E++  D+ +   L          +FH AA+ +  + +       N +   N+++ A+  
Sbjct: 71  -EVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK 129

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAASEGLP 162
           K   K+IY SS         Y   +      K       Y  SK   D+    + S    
Sbjct: 130 KA--KVIYASS----AGV--YGNTKAPNVVGKNESPENVYGFSKLCMDEFV-LSHSNDNV 180

Query: 163 IVPVYPGV----IYGPG 175
            V    G+    +YGP 
Sbjct: 181 QV----GLRYFNVYGPR 193

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 30/190 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVT 54
             I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D  
Sbjct: 47  RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFL 104

Query: 55  DYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
                 +       IFH  A      W          N +  K ++    E +     +Y
Sbjct: 105 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLY 160

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFC--TQYERSKAVADKIALQAASE-GLPIVPVYPG 169
            SS     +T G     + +   +Y      +  SK + D+   Q   E    IV    G
Sbjct: 161 ASS----AATYG-GRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV----G 211

Query: 170 V----IYGPG 175
                +YGP 
Sbjct: 212 FRYFNVYGPR 221

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 45/216 (20%), Positives = 68/216 (31%), Gaps = 44/216 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISG-----LPSEGALE----- 47
            +++V G  GY G      L K+ + V     LVRR  D         P     +     
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71

Query: 48  ---------LVYGDVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRF---FAVN 90
                    L  GD+ D+   +   F       + H          + D SR       N
Sbjct: 72  KALTGKSIELYVGDICDF-EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 130

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALG----STD-GYI-ADENQVHEEKYFCTQ--- 141
           V G  NV+ A KE      ++   +    G      + GYI    N   +   +  Q   
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 190

Query: 142 -YERSKAVADKIALQAASE--GLPIVPVYPGVIYGP 174
            Y  SK       +    +  G+    +  GV+YG 
Sbjct: 191 FYHLSKVHDSHN-IAFTCKAWGIRATDLNQGVVYGV 225

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 65.3 bits (159), Expect = 1e-12
 Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 15/207 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTS----DISGLPSEGALELVYGDVTD 55
           ++ V+G +G+ GG L   L   G +V+  +L   T     + + +     ++   GD+ D
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRD 68

Query: 56  YRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
              L+++   F   ++FH AA  LV     +P   ++ NV G   +++A +    V+ ++
Sbjct: 69  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
             +S     + +       + +E       Y  SK  A+ +   +          Y    
Sbjct: 129 NITSDKCYDNKEWIW--GYRENEAMGGYDPYSNSKGCAE-LVTSSYRNSFFNPANYGQHG 185

Query: 172 YGPGKLTTGNLVAKLQWKKVDLVKDIF 198
                +  GN++    W    +V DI 
Sbjct: 186 TAVATVRAGNVIGGGDWALDRIVPDIL 212

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 30/188 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVTDY 56
           I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLIQ 59

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
               +       IFH  A      W          N +  K ++    E +     +Y S
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLYAS 115

Query: 115 SFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAASE-GLPIVPVYPGV- 170
           S     +T G     + +   +Y      Y  SK + D+   Q   E    IV    G  
Sbjct: 116 S----AATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIV----GFR 166

Query: 171 ---IYGPG 175
              +YGP 
Sbjct: 167 YFNVYGPR 174

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 62.4 bits (152), Expect = 8e-12
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDY 56
            +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV + 
Sbjct: 28  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 87

Query: 57  RSL-VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             + VD       I+H A+   P  ++ +P +    N  G  N++  AK      +++  
Sbjct: 88  LYIEVDQ------IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLA 139

Query: 114 SS 115
           S+
Sbjct: 140 ST 141

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 33/183 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
            IL++G +G  G      +L   +   +    R   + S+++   ++  +    GDV D 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL 82

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
             L  A  G  +  H AAL  V    P    +P      N+ G  NV+ A  +   + ++
Sbjct: 83  ERLNYALEGVDICIHAAALKHV----PIAEYNPLECIKTNIMGASNVINACLKNA-ISQV 137

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I  S       TD      N           Y  +K  +DK+ + A +        +  V
Sbjct: 138 IALS-------TDKAANPINL----------YGATKLCSDKLFVSANNFKGSSQTQFSVV 180

Query: 171 IYG 173
            YG
Sbjct: 181 RYG 183

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 60.3 bits (146), Expect = 4e-11
 Identities = 39/175 (22%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             +L  G  GY    L  AL  QG  +    R    +  + + GA E +     +  SL 
Sbjct: 6   GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGA-EPLLWPGEE-PSLD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 H++  TA       PD      +   G     Q A        + Y S+    G
Sbjct: 63  GV---THLLISTA-------PDSGGDPVLAALGD----QIAARAAQFRWVGYLSTTAVYG 108

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
             DG   DE              R +          A   LP+       IYGPG
Sbjct: 109 DHDGAWVDETTPLTP-----TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPG 158

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 42/185 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGALELVYGDVTDYRS 58
            ++L++GA+G  G  L   +L +    +  A  R+        +      +   V     
Sbjct: 6   KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--------ALAEHPRLDNPVGPLAE 57

Query: 59  L-------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           L       +D  F C       A           F AV+ +    V + A E       +
Sbjct: 58  LLPQLDGSIDTAFCCLGTTIKEA------GSEEAFRAVDFDLPLAVGKRALEMG-ARHYL 110

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
             S   ALG      AD             Y R K   ++   +     L I    P ++
Sbjct: 111 VVS---ALG------ADAKSS-------IFYNRVKGELEQALQEQGWPQLTI--ARPSLL 152

Query: 172 YGPGK 176
           +GP +
Sbjct: 153 FGPRE 157

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 57.8 bits (141), Expect = 3e-10
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH----PTFVE 56

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
           GD+ +  +L+      H    VI H A L      V+     P  ++  NV G   ++ A
Sbjct: 57  GDIRN-EALMTEILHDHAIDTVI-HFAGLKAVGESVQ----KPLEYYDNNVNGTLRLISA 110

Query: 101 AKETKTVEKIIYTSS 115
            +    V+  I++SS
Sbjct: 111 MRAAN-VKNFIFSSS 124

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 57.4 bits (139), Expect = 6e-10
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             +LV+G +GY+G      L++ G+               V R   ++       +    
Sbjct: 12  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYE 67

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            D+ D R  ++  F  +    VI H A L       +     P R++  N+ G   +++ 
Sbjct: 68  VDLCD-RKGLEKVFKEYKIDSVI-HFAGLKAVGESTQ----IPLRYYHNNILGTVVLLEL 121

Query: 101 AKETKTVEKIIYTSS 115
            ++   V K +++SS
Sbjct: 122 MQQYN-VSKFVFSSS 135

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 57.4 bits (139), Expect = 7e-10
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSEGALEL 48
           + + ++G+ G +G  L   L   GH V  LVR+          P   A +L
Sbjct: 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDL 198

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            ++LV+GA+G LG  +     +          R             ++   ++ D  ++ 
Sbjct: 3   RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFR------RARPKFEQV---NLLDSNAVH 53

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
                F  HVI H AA     +VE     P     +NV+   N+ + A        +IY 
Sbjct: 54  HIIHDFQPHVIVHCAAERRPDVVE---NQPDAASQLNVDASGNLAKEAAAVGA--FLIYI 108

Query: 114 S 114
           S
Sbjct: 109 S 109

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 56.3 bits (137), Expect = 1e-09
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 36/134 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             IL+ G +GY+G      L+ +G SV             +               +   
Sbjct: 2   NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-----------GAKFYN 50

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAA 101
           GD+ D ++ +   F    I    H AA       +E     P +++  NV G   +++  
Sbjct: 51  GDLRD-KAFLRDVFTQENIEAVMHFAADSLVGVSME----KPLQYYNNNVYGALCLLEVM 105

Query: 102 KETKTVEKIIYTSS 115
            E K V+K I++S+
Sbjct: 106 DEFK-VDKFIFSST 118

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 55.2 bits (134), Expect = 2e-09
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             ILV+G +GY+G      LL  G+ V          R  + R   I+G           
Sbjct: 6   GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG----KTPAFHE 61

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            DV+D    +   F  H     I H AAL      V      P  ++  N++ L ++++ 
Sbjct: 62  TDVSD-ERALARIFDAHPITAAI-HFAALKAVGESVA----KPIEYYRNNLDSLLSLLRV 115

Query: 101 AKETKTVEKIIYTSS 115
            +E   V++I+++SS
Sbjct: 116 MRERA-VKRIVFSSS 129

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 41/149 (27%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSV-------------------RALVRRTSDISGL 40
           M++LV G +GY+G     ALL+   HSV                     + R+     G 
Sbjct: 3   MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 41  PSEGA---LELVYGDVTDYRSLVDACFGCH-----VIFHTAAL------VEPWLPDPSRF 86
               A     L  GDV +    ++  F  H     V+ H  A       V     DP ++
Sbjct: 63  KPPWADRYAALEVGDVRN-EDFLNGVFTRHGPIDAVV-HMCAFLAVGESVR----DPLKY 116

Query: 87  FAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           +  NV G+  ++QA    K  +KII++SS
Sbjct: 117 YDNNVVGILRLLQAMLLHK-CDKIIFSSS 144

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 13  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 59

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +     +V+ + AA       E         + +N  G KN+  AA       +I+  S
Sbjct: 60  NE-KKPNVVINCAAHTAVDKCE---EQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS 112

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 22/121 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ L++GASG LG  L   LL + H V  +   +        +G  +L   D+TD+  L 
Sbjct: 1   MRTLITGASGQLGIELSR-LLSERHEVIKVYNSS------EIQGGYKL---DLTDFPRLE 50

Query: 61  DAC--FGCHVIFHTAAL--V---EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           D        VI + AA+  V   E    +  + + +N E ++++V+A K   +   I++ 
Sbjct: 51  DFIIKKRPDVIINAAAMTDVDKCE---IEKEKAYKINAEAVRHIVRAGKVIDS--YIVHI 105

Query: 114 S 114
           S
Sbjct: 106 S 106

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +++++GA+G LG +L   L  + + +    ++  DI+             +++  + +V
Sbjct: 6   ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDIT-------------NISQVQQVV 52

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                 H+I H AA       E    +    + +N  G +NV  A++      K++Y S
Sbjct: 53  QE-IRPHIIIHCAAYTKVDQAE---KERDLAYVINAIGARNVAVASQLVGA--KLVYIS 105

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 51.3 bits (124), Expect = 6e-08
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 37/141 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----------------VRRTSDISGLPSEG 44
            K+LV+G +GY+G      LL+ G+    +                +RR  +++G     
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS--- 59

Query: 45  ALELVYGDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGL 94
            +E    D+ D +  +   F  +    VI H A L      V+     P  ++ VN+ G 
Sbjct: 60  -VEFEEMDILD-QGALQRLFKKYSFMAVI-HFAGLKAVGESVQ----KPLDYYRVNLTGT 112

Query: 95  KNVVQAAKETKTVEKIIYTSS 115
             +++  K    V+ ++++SS
Sbjct: 113 IQLLEIMKAHG-VKNLVFSSS 132

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRR--TSDISGLPSEGALELVYGDVTD 55
            K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ +
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61

Query: 56  YRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
            ++ V      +     FH A    +   + +P   F +NV G  N+++A ++  +   I
Sbjct: 62  -KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120

Query: 111 IYTS-----------SFFALGSTDGYIADENQVHEE-KY-FCTQYERSKAVAD 150
           IY+S            +    +    +   N   E  +  F + Y  SK  AD
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 45/205 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  LVDAC---------FGCHVIFHTAALVEPW----LPDPSRF---FAVNVEGLKNVVQA-- 100
           L              G  ++ + A ++  +     P+ +       VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 101 ------------AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                        + + +   +I  SS   LGS    I D N     ++    Y  SKA 
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISS--GLGS----ITD-NTSGSAQFPVLAYRMSKAA 178

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +A+    + + +V   PG
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPG 203

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
          M+ L++G +G++G  L + L +Q   V    R             +E++  D+ D + + 
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-----AKLPNVEMISLDIMDSQRVK 67

Query: 61 DACFGC--HVIFHTAA 74
                    IFH AA
Sbjct: 68 KVISDIKPDYIFHLAA 83

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 25/121 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M IL+ G +G +G  L  +L   G+ + AL   + +              GD ++ + + 
Sbjct: 1   MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEFC------------GDFSNPKGVA 47

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           +        VI + AA       E    +P     +N   ++ + +AA ET     +++ 
Sbjct: 48  ETVRKLRPDVIVNAAAHTAVDKAE---SEPELAQLLNATSVEAIAKAANETGA--WVVHY 102

Query: 114 S 114
           S
Sbjct: 103 S 103

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 21/117 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-----ALELVYGDVTDYR 57
            LV+GAS   G  +  A +  G +V    RRT  +  L +       A+ L   DVTD  
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL---DVTDGE 64

Query: 58  SLVDA------CFGC--HVI-----FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
            +          +G    ++         A  E    +    F ++V G   + +A 
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           +  LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ 
Sbjct: 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA 73

Query: 55 DYRSLV 60
          D  S+ 
Sbjct: 74 DACSVQ 79

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 40/193 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDY-- 56
           ILV+G S  +G  +   L           + R  + +  L  +       V GD+T+   
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSV 64

Query: 57  -RSLVDAC---FGC-HVIFHTAALVEPWLP----DPSRF---FAVNVEGLKNVVQAA--- 101
            + LV+A     G    +   A ++EP       D + +   + +N   + ++V  A   
Sbjct: 65  LKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPE 124

Query: 102 -KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE- 159
            K+T     +++ SS         + A              Y  SKA  +  A+  A+E 
Sbjct: 125 LKKTNG--NVVFVSSDACNMYFSSWGA--------------YGSSKAALNHFAMTLANEE 168

Query: 160 -GLPIVPVYPGVI 171
             +  + V PG++
Sbjct: 169 RQVKAIAVAPGIV 181

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           K  L++G  G  G  L   LL++G+ V    RR+ +     +  L  E  +++++ D+ 
Sbjct: 3  GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLL 62

Query: 55 DYRSLV 60
          ++ +++
Sbjct: 63 EFSNII 68

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 15/117 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-----------SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACF-GCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
           +GD+ D   L+     G   I H AA   V+  +   S F   NV+G + ++Q A +
Sbjct: 61  HGDIRD-AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL- 59
           MKIL+ GASG LG  +    L++   V    R + D++             D+T+  S+ 
Sbjct: 4   MKILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVT------------VDITNIDSIK 50

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                   VDA          + L E      +   +  + G  N+V   
Sbjct: 51  KMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDY---R 57
           I+V+GA   LG  L   L+++GH V  + RR   +         A+  +  D+  +    
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVD 65

Query: 58  SLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
               A     G                 +         R    N+     V Q  
Sbjct: 66  VAFAAAVEWGG-LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 31/205 (15%), Positives = 63/205 (30%), Gaps = 41/205 (20%)

Query: 1   MK-ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGL----PSEGALELVYGD 52
           M  IL++G +  LG  L  ALL        +    R       L     +   + ++  D
Sbjct: 21  MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 80

Query: 53  VTDYRSLVDAC---------FGCHVIFHTAALVEPWLP----DPSRF---FAVNVEG--- 93
           + ++ +               G +V+F+ A +                     N      
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 140

Query: 94  -----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                L  + +AAK  ++    +  ++   + S  G I          Y       SK+ 
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT-----SKSA 195

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +++    + +  V ++PG
Sbjct: 196 LNAATKSLSVDLYPQRIMCVSLHPG 220

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 53/207 (25%)

Query: 3   ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSD--------ISGLPSEGALELVYG 51
            +++GAS   G  L   L +    G  +  +  R+          +     +  + L   
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVM-LVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 52  DVTDY---RSLVDAC--------FGCHVIFHTAALVEPWLPDP---------SRFFAVNV 91
           D+      + L+ A             ++ + AA +                + ++A+N+
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 92  EGLKNVVQAA----KETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK 146
             +  +        +++  + K ++  SS  AL    G+           Y C      K
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL---------Y-CA----GK 173

Query: 147 AVADKIALQAASE--GLPIVPVYPGVI 171
           A  D +    A+E   + ++   PG +
Sbjct: 174 AARDMLYQVLAAEEPSVRVLSYAPGPL 200

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.98
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.97
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.97
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.97
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.97
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.97
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.97
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.97
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.97
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.97
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.96
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.96
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.96
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.96
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.96
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.96
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.96
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.96
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.95
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.95
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.95
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.95
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.95
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.95
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.95
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.95
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.95
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.95
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.95
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.95
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.95
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.94
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.94
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.93
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.93
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.93
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.93
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.93
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.93
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.93
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.93
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.93
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.92
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.92
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.92
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.92
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.91
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.9
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.9
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.89
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.89
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.89
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.89
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.88
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.88
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.88
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.87
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.87
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.87
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.86
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.86
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.84
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.84
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.83
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.83
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.83
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.81
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.8
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.8
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.79
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.79
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.76
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.76
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.75
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.62
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.6
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.3
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.28
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.26
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.22
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.16
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.16
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.03
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.91
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.87
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.83
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.81
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.76
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.75
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.74
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.73
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.73
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.68
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.67
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.61
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.57
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.47
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.44
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.39
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.34
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.3
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.26
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.26
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	98.24
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	98.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.22
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.2
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.19
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.19
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.16
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.15
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.14
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.13
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.12
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	98.12
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.1
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.09
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.05
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.03
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.02
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.02
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	98.0
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.99
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.98
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.97
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.97
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.96
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.95
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.89
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.89
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.85
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.84
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.83
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.81
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.8
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.8
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.78
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.76
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.75
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.75
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.74
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.73
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.72
1lnq_A	336	MTHK channels, potassium channel related protein;	97.67
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.64
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.62
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.62
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.62
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.59
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.58
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.58
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.57
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.56
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.54
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.54
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.53
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.5
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.48
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.47
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.47
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.43
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.43
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.43
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.41
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.4
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.39
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.39
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.39
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.38
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.37
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.35
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.35
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.35
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.34
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.33
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.3
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.29
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.28
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.27
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.25
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.24
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.21
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.21
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.2
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.18
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.15
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.15
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.13
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.13
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.13
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.11
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.07
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.04
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.03
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.02
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.01
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.0
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.99
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.97
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.97
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.97
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.94
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.93
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.93
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.92
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.91
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.91
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.9
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.89
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.89
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.89
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.88
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.87
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.86
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.86
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.85
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.83
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.82
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.82
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.81
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.8
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.79
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.78
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.78
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.78
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.77
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.76
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.76
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	96.75
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.75
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.74
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.74
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.73
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.71
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.7
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.68
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.67
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.66
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.66
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.66
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.64
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.63
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.63
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.62
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.61
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.6
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.6
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.58
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.58
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.56
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.56
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.56
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.54
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.53
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.52
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.52
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.51
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.48

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-31  Score=221.65  Aligned_cols=204  Identities=21%  Similarity=0.213  Sum_probs=148.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++.+.+.. .+++++.+|++|++++.++++++|+|||+|+....+.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   92 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP   92 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence            789999999999999999999999999999998765443321 2678999999999999999999999999999765555


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC--cccCCCCccccc-cccCcHHHHHHHHHHHHHHHH
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEK-YFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~--~~~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      .++++.+++|+.++.++++++.+.+ .++|||+||..+|+....  .+ +|+.+..+. ...+.|+.+|..+|.+++.++
T Consensus        93 ~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~  170 (342)
T 2x4g_A           93 RRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQA  170 (342)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence            6778899999999999999999874 689999999999986543  33 444433220 014679999999999999987


Q ss_pred             hcCCCeEEEecCceecCCC-C-chhHHHHHHhhcccc----eeeeehhhHhhhhhh
Q 027007          158 SEGLPIVPVYPGVIYGPGK-L-TTGNLVAKLQWKKVD----LVKDIFLLERMRHSC  207 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~~-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  207 (229)
                      ..|++++++||+.+|||+. . ....++.....+...    ....+...+|++.+.
T Consensus       171 ~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          171 RNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             HTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             hcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence            5599999999999999976 2 123344443333222    123345555555443

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.1e-32  Score=215.79  Aligned_cols=193  Identities=18%  Similarity=0.168  Sum_probs=154.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~~   78 (229)
                      ++|||||+++||+++++.|+++|++|++++|+.++++.... ..+..+++|++|+++++++++   ++|++|||||...+
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~   91 (242)
T 4b79_A           13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRD   91 (242)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            68999999999999999999999999999999877665433 478899999999999877764   68999999997432


Q ss_pred             ----CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----H
Q 027007           79 ----WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----V  148 (229)
Q Consensus        79 ----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~  148 (229)
                          +.++|++.+++|+.+++++++++.+++.  .++||++||..+..+.++.              ..|+.||.    +
T Consensus        92 ~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------------~~Y~asKaav~~l  157 (242)
T 4b79_A           92 REEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR--------------PAYSASKGAIVQL  157 (242)
T ss_dssp             GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC--------------HHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC--------------HHHHHHHHHHHHH
Confidence                3357889999999999999999988652  3599999999876554332              34999998    7


Q ss_pred             HHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          149 ADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       149 ~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ++.++.+++++||+||+|.||.+.+|+....   ...... + ....+++|++.|+|+++++.||-
T Consensus       158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~-~-~~~~PlgR~g~peeiA~~v~fLa  221 (242)
T 4b79_A          158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRR-I-MQRTPLARWGEAPEVASAAAFLC  221 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHH-H-HHTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHH-H-HhcCCCCCCcCHHHHHHHHHHHh
Confidence            7888889999999999999999999965322   122222 2 23346789999999999998875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.98  E-value=1e-30  Score=215.48  Aligned_cols=166  Identities=22%  Similarity=0.269  Sum_probs=141.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+||||||+||||++++++|+++|++|++++|+++..+ +.   +++++++|++ .+++.++++++|+|||+|+..... 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~-   76 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ-   76 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC-
Confidence            58999999999999999999999999999999844433 32   6889999999 999999999999999999976543 


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh-c
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-E  159 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~  159 (229)
                       ++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+.. .
T Consensus        77 -~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~  151 (311)
T 3m2p_A           77 -GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLP---DLMYGVSKLACEHIGNIYSRKK  151 (311)
T ss_dssp             -SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHc
Confidence             678899999999999999999885 68999999999998766555666554433   46799999999999999875 6


Q ss_pred             CCCeEEEecCceecCCCC
Q 027007          160 GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~~  177 (229)
                      |++++++||+.+|||+..
T Consensus       152 g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          152 GLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             CCEEEEEEECEEECSCC-
T ss_pred             CCCEEEEeeCceeCcCCC
Confidence            999999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.97  E-value=9.4e-31  Score=215.55  Aligned_cols=170  Identities=26%  Similarity=0.338  Sum_probs=143.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc--CC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~--~~   78 (229)
                      ||||||||+||||++++++|+++|++|++++|+.+...... ...++++.+|++|.+ +.+++++ |+|||+|+..  ..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            89999999999999999999999999999999765433322 236889999999998 8888888 9999999963  23


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      +..++...+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.++.
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p---~~~Y~~sK~~~e~~~~~~~~  153 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKP---ISVYGAAKAAGEVMCATYAR  153 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHHHH
Confidence            446788899999999999999998875 67999999999999876656666654433   46799999999999999875


Q ss_pred             -cCCCeEEEecCceecCCCC
Q 027007          159 -EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 -~gi~~~~irpg~i~g~~~~  177 (229)
                       .|++++++||+++|||+..
T Consensus       154 ~~g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          154 LFGVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             HHCCEEEEEEECEEECTTCC
T ss_pred             HhCCCEEEEeeccccCcCCC
Confidence             4999999999999999754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=1.5e-30  Score=216.42  Aligned_cols=174  Identities=21%  Similarity=0.272  Sum_probs=141.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCC--C---CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS--D---ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~--~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|  ++|++++|...  .   ++.+....+++++.+|++|.+++.+++.++|+|||+|
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLA   83 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEECC
Confidence            789999999999999999999986  89999998642  1   2222223478899999999999999999999999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +....  +..++++.+++|+.++.++++++.+....++|||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           84 AESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLM---PSSPYSATKAASDM  160 (336)
T ss_dssp             CCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCC---CCSHHHHHHHHHHH
T ss_pred             CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCC---CCCccHHHHHHHHH
Confidence            97431  22467789999999999999999987534699999999999875444455554333   24679999999999


Q ss_pred             HHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          152 IALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       152 ~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +++.++. .|++++++||+.+|||+..
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQF  187 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCC
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCC
Confidence            9998864 5899999999999999863

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.97  E-value=2.8e-30  Score=213.48  Aligned_cols=170  Identities=23%  Similarity=0.256  Sum_probs=141.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++|++|++++|+... +.+    +++++.+|++|++++.+++++  +|+|||+|+....
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   87 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP----NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV   87 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT----TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc----eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch
Confidence            689999999999999999999999999999998765 222    688999999999999998875  9999999997432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC--CCcccCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST--DGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                        +..++++.+++|+.++.++++++......++||++||.++|+..  ...+.+|+.+..+   .+.|+.+|..+|.+++
T Consensus        88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~  164 (321)
T 2pk3_A           88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRP---MSPYGVSKASVGMLAR  164 (321)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBC---CSHHHHHHHHHHHHHH
T ss_pred             hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCC---CCccHHHHHHHHHHHH
Confidence              33577889999999999999999665336799999999999865  3444555544332   4679999999999999


Q ss_pred             HHHh-cCCCeEEEecCceecCCCCc
Q 027007          155 QAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       155 ~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      .++. +|++++++||+++|||+...
T Consensus       165 ~~~~~~gi~~~ilrp~~v~g~~~~~  189 (321)
T 2pk3_A          165 QYVKAYGMDIIHTRTFNHIGPGQSL  189 (321)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCCT
T ss_pred             HHHHHcCCCEEEEEeCcccCcCCCC
Confidence            8864 49999999999999998643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.97  E-value=7.3e-31  Score=219.68  Aligned_cols=173  Identities=23%  Similarity=0.301  Sum_probs=144.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCC------CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSE------GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~------~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |+|||||||||||++++++|+++|++|++++|+......    +...      .+++++++|++|++++.++++++|+||
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi  105 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVL  105 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEEE
Confidence            689999999999999999999999999999997643221    0000      378999999999999999999999999


Q ss_pred             EeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      |+|+....  +..++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..
T Consensus       106 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~  181 (351)
T 3ruf_A          106 HQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNP---LSPYAVTKYV  181 (351)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCC---CSHHHHHHHH
T ss_pred             ECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCC---CChhHHHHHH
Confidence            99996321  234677889999999999999999885 78999999999998876666666655433   4679999999


Q ss_pred             HHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       149 ~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +|.+++.+++ .|++++++||+++|||+..
T Consensus       182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~  211 (351)
T 3ruf_A          182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQD  211 (351)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECSEESTTCC
T ss_pred             HHHHHHHHHHHhCCCEEEEeeCceeCcCCC
Confidence            9999998874 4999999999999999864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.97  E-value=5.8e-32  Score=216.28  Aligned_cols=197  Identities=18%  Similarity=0.149  Sum_probs=154.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      .+|||||+++||+++++.|+++|++|++++|+++++++..     ....+.++++|++|+++++++++       ++|++
T Consensus         9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiL   88 (254)
T 4fn4_A            9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVL   88 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999999875543221     12468899999999999877654       58999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....       +.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.+..              
T Consensus        89 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~--------------  154 (254)
T 4fn4_A           89 CNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG--------------  154 (254)
T ss_dssp             EECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC--------------
T ss_pred             EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC--------------
Confidence            999996321       335688999999999999999998875   23599999999876554332              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ..|+.||.    +++.++.+++++||+||+|.||.+.+|.....   .....+.......+++|++.|+|+++++.||-.
T Consensus       155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaS  234 (254)
T 4fn4_A          155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            34999998    78888899999999999999999999864221   222223333444556899999999999988753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.97  E-value=3.8e-30  Score=216.40  Aligned_cols=170  Identities=22%  Similarity=0.281  Sum_probs=142.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH--CCCeEEEEEcCCCC-------CCCCC-----CCCCeEEEEccCCChhhHHhh-cCC
Q 027007            1 MKILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSD-------ISGLP-----SEGALELVYGDVTDYRSLVDA-CFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~--~g~~V~~~~r~~~~-------~~~~~-----~~~~~~~~~~D~~~~~~~~~~-~~~   65 (229)
                      |+||||||+||||++++++|++  +|++|++++|+...       .+.+.     ....+.++.+|++|++++.++ ..+
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   90 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH   90 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence            5899999999999999999999  99999999996541       11111     113578999999999999998 788


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      +|+|||+|+..+.+..+++..+++|+.++.++++++.+.+ . +|||+||..+|+.... +.+|+.+..+   .+.|+.+
T Consensus        91 ~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~-~~V~~SS~~vyg~~~~-~~~E~~~~~p---~~~Y~~s  164 (362)
T 3sxp_A           91 FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-A-KVIYASSAGVYGNTKA-PNVVGKNESP---ENVYGFS  164 (362)
T ss_dssp             CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGGCSCCS-SBCTTSCCCC---SSHHHHH
T ss_pred             CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEeCcHHHhCCCCC-CCCCCCCCCC---CChhHHH
Confidence            9999999998665667889999999999999999998875 3 4999999999987665 4555544332   4679999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          146 KAVADKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       146 K~~~e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      |..+|.+++.++.. ++++++||+++|||+..
T Consensus       165 K~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          165 KLCMDEFVLSHSND-NVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             HHHHHHHHHHTTTT-SCEEEEEECSEESTTCG
T ss_pred             HHHHHHHHHHHhcc-CCEEEEEeCceeCcCCC
Confidence            99999999998765 99999999999999864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=4.7e-30  Score=213.65  Aligned_cols=173  Identities=27%  Similarity=0.325  Sum_probs=141.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC---C---CeEEEEEcCCCC-----CCCCCCCCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ---G---HSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~---g---~~V~~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |+||||||+||||++++++|+++   |   ++|++++|....     +..+....+++++++|++|++++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            89999999999999999999997   8   999999996421     111222247889999999999999999999999


Q ss_pred             EEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      ||+|+....  +..++++.+++|+.++.++++++.+.+ .++|||+||.++|+.....+.+|+.+..   +.+.|+.+|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~  156 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLE---PNSPYAASKA  156 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCC---CCSHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCC---CCCchHHHHH
Confidence            999986431  224677899999999999999999885 6799999999999865444455544332   2467999999


Q ss_pred             HHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       148 ~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .+|.+++.+.. .|++++++||+++|||+..
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeECCCCC
Confidence            99999988864 4999999999999999863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.97  E-value=6.9e-31  Score=221.56  Aligned_cols=175  Identities=22%  Similarity=0.319  Sum_probs=145.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCC-ChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++ |++|++++|+.++...+....+++++.+|++ |.+++.++++++|+|||+|+....
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~  104 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATP  104 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccH
Confidence            58999999999999999999998 9999999998876655444458999999999 999999999999999999997542


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc----ccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~sK~~~e~~  152 (229)
                        +..++.+.+++|+.++.++++++.+.+  ++|||+||..+|+.....+.+|+..+    +...+.+.|+.+|..+|.+
T Consensus       105 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~  182 (372)
T 3slg_A          105 ATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRV  182 (372)
T ss_dssp             HHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             HHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHH
Confidence              224667889999999999999999885  79999999999997655444444322    1112345799999999999


Q ss_pred             HHHHHhcCCCeEEEecCceecCCCC
Q 027007          153 ALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       153 ~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      ++.+...|++++++||+.+|||+..
T Consensus       183 ~~~~~~~g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          183 IWGYGMEGLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             HHHHHTTTCEEEEEEECSEECSSCC
T ss_pred             HHHHHHCCCCEEEEccccccCCCcc
Confidence            9998766999999999999999853

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.97  E-value=1.9e-30  Score=216.90  Aligned_cols=161  Identities=26%  Similarity=0.323  Sum_probs=138.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+||||||+||||++++++|+++|++|++++|+.+.       .+++++.+|++|.+++.++++++|+|||+|+......
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~   92 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAP   92 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcch
Confidence            689999999999999999999999999999998654       2677899999999999999999999999999866555


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeec--CCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS--TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      .++++.+++|+.++.++++++.+.+ .++|||+||..+|+.  ....+.+|..+..+   .+.|+.+|.++|.+++.+..
T Consensus        93 ~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~~~  168 (347)
T 4id9_A           93 ADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCP---NSPYGLTKLLGEELVRFHQR  168 (347)
T ss_dssp             GGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCC---CChHHHHHHHHHHHHHHHHH
Confidence            5567899999999999999999874 789999999999987  34444555544332   46799999999999998864


Q ss_pred             -cCCCeEEEecCcee
Q 027007          159 -EGLPIVPVYPGVIY  172 (229)
Q Consensus       159 -~gi~~~~irpg~i~  172 (229)
                       .|++++++||+++|
T Consensus       169 ~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          169 SGAMETVILRFSHTQ  183 (347)
T ss_dssp             HSSSEEEEEEECEEE
T ss_pred             hcCCceEEEccceEe
Confidence             58999999999999

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.97  E-value=5.2e-30  Score=214.07  Aligned_cols=173  Identities=24%  Similarity=0.291  Sum_probs=139.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCC-----CCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~   71 (229)
                      |+|||||||||||++++++|+++|  ++|++++|....     ++.+....+++++++|++|++++.+++++  +|+|||
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  104 (346)
T 4egb_A           25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVN  104 (346)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEE
Confidence            589999999999999999999999  788888876421     12222235899999999999999999986  999999


Q ss_pred             eCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-CcccCCCCccccccccCcHHHHHHH
Q 027007           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      +|+....  +..++...+++|+.++.++++++.+.+ .++|||+||..+|+... ..+.+|+.+..+   .+.|+.+|..
T Consensus       105 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p---~~~Y~~sK~~  180 (346)
T 4egb_A          105 FAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAP---NSPYSSSKAS  180 (346)
T ss_dssp             CCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCC---CSHHHHHHHH
T ss_pred             CCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCC---CChhHHHHHH
Confidence            9997532  345678899999999999999999885 68999999999998753 344555554432   4679999999


Q ss_pred             HHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       149 ~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +|.+++.++. .|++++++||+.+|||+..
T Consensus       181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~  210 (346)
T 4egb_A          181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQY  210 (346)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEESTTCC
T ss_pred             HHHHHHHHHHHhCCCEEEEeecceeCcCCC
Confidence            9999999875 4999999999999999863

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=1.3e-29  Score=212.75  Aligned_cols=174  Identities=20%  Similarity=0.301  Sum_probs=139.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCC--C---CCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTS--D---ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~--~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      ||||||||+||||++++++|+++ |++|++++|+..  .   +..+....+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            89999999999999999999998 799999998652  2   2222223478999999999999999988  89999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcC-CCc-------eEEEEccceeeecCCC--c--------ccCCCCc
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK-TVE-------KIIYTSSFFALGSTDG--Y--------IADENQV  132 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-------~iv~~sS~~~~~~~~~--~--------~~~~~~~  132 (229)
                      |+....  +..++++.+++|+.++.++++++.+.+ ..+       +|||+||.++|+....  .        +.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            997431  224677899999999999999999872 234       9999999998876431  1        3344433


Q ss_pred             cccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          133 HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ..   +.+.|+.+|..+|.+++.++. .|++++++||+.+|||+..
T Consensus       161 ~~---~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          161 YA---PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             CC---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC
T ss_pred             CC---CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCC
Confidence            22   246799999999999998864 4999999999999999863

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=5.6e-30  Score=211.03  Aligned_cols=171  Identities=26%  Similarity=0.357  Sum_probs=138.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~   77 (229)
                      |+||||||+||||++++++|+++|++|++++|.... .+.+.  .+++++++|++|++++.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            899999999999999999999999999999985332 22222  256788999999999999887  7999999998643


Q ss_pred             C--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc-eeeec-CCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGS-TDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~-~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      .  +.+++.+.+++|+.++.++++++.+.+ .++||++||. .+|+. ....+.+|+.+..   +.+.|+.+|..+|.++
T Consensus        79 ~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           79 VKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPR---PKSPYAASKAAFEHYL  154 (311)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCC---CCSHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCC---CCChHHHHHHHHHHHH
Confidence            1  234677889999999999999998874 6799999998 88875 3333444444322   2467999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.++. .|++++++||+++|||+..
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~  179 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQD  179 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCC
Confidence            88764 5999999999999999764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.97  E-value=3.6e-31  Score=210.83  Aligned_cols=191  Identities=15%  Similarity=0.161  Sum_probs=150.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-CCCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      +||||||+++||++++++|+++|++|++++|++++.+++. ....+.++++|++|+++++++++       ++|++||||
T Consensus         4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNA   83 (247)
T 3ged_A            4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNA   83 (247)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5899999999999999999999999999999865433322 22468889999999999877654       589999999


Q ss_pred             cccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           74 ALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        74 ~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      |...      .+.++|++.+++|+.+++++.+++.+++  ..++||++||..++.+.++.              ..|+.|
T Consensus        84 G~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~--------------~~Y~as  149 (247)
T 3ged_A           84 CRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS--------------EAYASA  149 (247)
T ss_dssp             CCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC--------------HHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC--------------HHHHHH
Confidence            8732      2345789999999999999999998764  23699999999876554332              349999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |.    +++.+++++++ ||+||+|.||++.+|......   .+..  ...+++|++.|+|+++++.||-.
T Consensus       150 Kaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~---~~~~--~~~Pl~R~g~pediA~~v~fL~s  214 (247)
T 3ged_A          150 KGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT---QEDC--AAIPAGKVGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             HHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC---HHHH--HTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH---HHHH--hcCCCCCCcCHHHHHHHHHHHHh
Confidence            98    77778888876 899999999999998753222   2211  22357899999999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.97  E-value=6.1e-30  Score=213.18  Aligned_cols=172  Identities=21%  Similarity=0.264  Sum_probs=142.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++......      ...++++++|++|++++.++++  ++|+|||+
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            589999999999999999999999999999998655432110      1367899999999999999988  89999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      |+....  ...++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|..+..+   .+.|+.+|.++|
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~---~~~Y~~sK~~~e  161 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSA---TNPYGQTKLMAE  161 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBC---SSHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCC---CChhHHHHHHHH
Confidence            997432  224566789999999999999998874 67999999999998766656666655443   467999999999


Q ss_pred             HHHHHHHhc--CCCeEEEecCceecCCC
Q 027007          151 KIALQAASE--GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       151 ~~~~~~~~~--gi~~~~irpg~i~g~~~  176 (229)
                      .+++.++..  +++++++||+++|||..
T Consensus       162 ~~~~~~~~~~~~~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          162 QILRDVEAADPSWRVATLRYFNPVGAHE  189 (341)
T ss_dssp             HHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred             HHHHHHhhcCCCceEEEEeeccccCCcc
Confidence            999988643  49999999999999953

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=8.6e-30  Score=212.36  Aligned_cols=174  Identities=22%  Similarity=0.344  Sum_probs=141.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++ |++|++++|+.++.+.+....+++++++|++|. +.+.++++++|+|||+|+....
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            89999999999999999999998 899999999876554433334789999999984 5688888899999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc----ccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~sK~~~e~~  152 (229)
                        ...++.+.+++|+.++.++++++.+.+  ++|||+||..+|+.....+.+|+.+.    +...+.+.|+.+|..+|.+
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~  158 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence              123567889999999999999998874  79999999999987655444554432    1112345799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ++.++. .|++++++||+.+|||+.
T Consensus       159 ~~~~~~~~~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          159 IWAYGEKEGLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSC
T ss_pred             HHHHHHhcCCCEEEEcCCcccCCCc
Confidence            998864 599999999999999985

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.97  E-value=6.7e-30  Score=210.72  Aligned_cols=170  Identities=18%  Similarity=0.202  Sum_probs=138.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc--CC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~--~~   78 (229)
                      |+||||||+||||++++++|+++|+.|++..|+....+.+.  ..++++.+|++| +++.++++++|+|||+|+..  ..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~   78 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVN--EAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI   78 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSC--TTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcC--CCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence            47999999999999999999999954444444433333222  368899999999 99999999999999999863  33


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      +..++++.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.++.
T Consensus        79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~  154 (313)
T 3ehe_A           79 GAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHP---ISLYGASKLACEALIESYCH  154 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999998875 67999999999999876666666554332   46799999999999999874


Q ss_pred             -cCCCeEEEecCceecCCCC
Q 027007          159 -EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 -~gi~~~~irpg~i~g~~~~  177 (229)
                       .|++++++||+.+|||+..
T Consensus       155 ~~g~~~~ilRp~~v~G~~~~  174 (313)
T 3ehe_A          155 TFDMQAWIYRFANVIGRRST  174 (313)
T ss_dssp             HTTCEEEEEECSCEESTTCC
T ss_pred             hcCCCEEEEeeccccCcCCC
Confidence             5999999999999999754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=3.1e-30  Score=216.42  Aligned_cols=174  Identities=21%  Similarity=0.317  Sum_probs=140.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----CCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++...+.    ...+++++++|++|++++.+++++  +|+|||+|+
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~   89 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   89 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECCC
Confidence            68999999999999999999999999999999876544321    123688999999999999998875  899999998


Q ss_pred             ccC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-cccCCCCccccccccCcHHHHHHHHHH
Q 027007           75 LVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        75 ~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      ...  .+..++.+.+++|+.++.++++++.+....++|||+||..+|+.... ...+|..+..   +.+.|+.+|..+|.
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           90 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG---GYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC---CSSHHHHHHHHHHH
T ss_pred             CcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCC---CCCccHHHHHHHHH
Confidence            532  12346778899999999999999988744679999999999987543 2333433322   24679999999999


Q ss_pred             HHHHHHh----------cCCCeEEEecCceecCCCC
Q 027007          152 IALQAAS----------EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       152 ~~~~~~~----------~gi~~~~irpg~i~g~~~~  177 (229)
                      +++.++.          .|++++++||+.+|||+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~  202 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW  202 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCC
Confidence            9988753          3899999999999999863

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=3.5e-30  Score=203.03  Aligned_cols=166  Identities=18%  Similarity=0.219  Sum_probs=136.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+||||||+||||++++++|+++|++|++++|++++.+.+.  ..++++++|++|.+++.++++++|+|||+|+...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---   79 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW---   79 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC---
Confidence            58999999999999999999999999999999977665554  3789999999999999999999999999998642   


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH-hc
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (229)
                      .+ .+.+++|+.++.++++++.+.+ .++||++||..++...++...++....    +.+.|+.+|..+|.+.+.+. ..
T Consensus        80 ~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~----p~~~Y~~sK~~~e~~~~~~~~~~  153 (227)
T 3dhn_A           80 NN-PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEV----PENILPGVKALGEFYLNFLMKEK  153 (227)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCS----CGGGHHHHHHHHHHHHHTGGGCC
T ss_pred             CC-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcc----hHHHHHHHHHHHHHHHHHHhhcc
Confidence            11 2378999999999999999885 679999999887765443333222222    24569999999999888887 56


Q ss_pred             CCCeEEEecCceecCCCC
Q 027007          160 GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~~  177 (229)
                      |++++++||+.+|||+..
T Consensus       154 ~~~~~ilrp~~v~g~~~~  171 (227)
T 3dhn_A          154 EIDWVFFSPAADMRPGVR  171 (227)
T ss_dssp             SSEEEEEECCSEEESCCC
T ss_pred             CccEEEEeCCcccCCCcc
Confidence            999999999999999753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.97  E-value=3e-29  Score=208.05  Aligned_cols=169  Identities=21%  Similarity=0.281  Sum_probs=140.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~   77 (229)
                      |+||||||+||||++++++|+++|++|++++|+..... .+.  .+++++.+|++|.+++.++++  ++|+|||+|+...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT--EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC--TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC--CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            68999999999999999999999999999999754322 122  267899999999999999988  8999999998643


Q ss_pred             C--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                      .  +..++++.+++|+.++.++++++.+.+ .++||++||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTN---PTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCC---CSSHHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCC---CCChHHHHHHHHHHHHHH
Confidence            2  224677889999999999999998874 6799999999999876555556655433   246799999999999999


Q ss_pred             HHhc-CCCeEEEecCceecCC
Q 027007          156 AASE-GLPIVPVYPGVIYGPG  175 (229)
Q Consensus       156 ~~~~-gi~~~~irpg~i~g~~  175 (229)
                      ++.. |++++++||+++|||+
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHhCCcEEEEecCcccCCC
Confidence            8754 8999999999999996

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=1.3e-29  Score=204.92  Aligned_cols=165  Identities=21%  Similarity=0.192  Sum_probs=139.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (229)
                      +||||||+||||++++++|+++|++|++++|++.+..    ..+++++.+|++|.+++.++++++|+||||||..  ...
T Consensus         5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--~~~   78 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--VEK   78 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--SCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--CcC
Confidence            5999999999999999999999999999999876544    2378999999999999999999999999999973  346


Q ss_pred             CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-CcccCCCCccccccccCcHHHHHHHHHHHHHHHH-hc
Q 027007           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (229)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (229)
                      ++++.+++|+.++.++++++++.. .++||++||..+|+... ....+|+.+..   +.+.|+.||...|.+++.++ ++
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~---~~~~Y~~sK~~~e~~~~~~a~~~  154 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPAR---PDGLYGVSKCFGENLARMYFDKF  154 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCC---CCChHHHHHHHHHHHHHHHHHHh
Confidence            788999999999999999998874 68999999999886432 23344444333   24679999999999998886 45


Q ss_pred             CCCeEEEecCceecCCC
Q 027007          160 GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~  176 (229)
                      |+++++|||+.+|++..
T Consensus       155 g~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          155 GQETALVRIGSCTPEPN  171 (267)
T ss_dssp             CCCEEEEEECBCSSSCC
T ss_pred             CCeEEEEEeecccCCCC
Confidence            99999999999999854

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.97  E-value=5.4e-31  Score=209.16  Aligned_cols=197  Identities=19%  Similarity=0.192  Sum_probs=152.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCC-CCCCeEEEEccCCChhhHHhhcC--CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLP-SEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~   76 (229)
                      .+|||||+++||+++++.|+++|++|++.+|+..+  .+.+. ....+..+++|++|+++++++++  ++|++|||||..
T Consensus        11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~   90 (247)
T 4hp8_A           11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGII   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCC
Confidence            58999999999999999999999999999997532  11111 12468899999999999888765  589999999973


Q ss_pred             C------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           77 E------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        77 ~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      .      .+.++|++.+++|+.+++++++++.+++    +.++||++||..+..+.++.              ..|+.||
T Consensus        91 ~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~--------------~~Y~asK  156 (247)
T 4hp8_A           91 RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV--------------PSYTAAK  156 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC--------------HHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC--------------hHHHHHH
Confidence            2      2445799999999999999999987754    24699999998876554332              3499999


Q ss_pred             H----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          147 A----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       147 ~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      .    +++.++.+++++||+||+|.||.+.+|+...... ...........+++|++.|+|+++++.||..
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS  227 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence            8    7888889999999999999999999986422111 1111112234467899999999999998753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=3.8e-30  Score=206.99  Aligned_cols=195  Identities=23%  Similarity=0.195  Sum_probs=140.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.....  ..+.++++|++|.+++.++++       ++|+||||
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   88 (257)
T 3tpc_A            9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNC   88 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            589999999999999999999999999999988765544322  367889999999999887775       79999999


Q ss_pred             CcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccceeeecCCCcccCCCCcc
Q 027007           73 AALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        73 a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                      ||....          +.++|++.+++|+.+++++++++.+.+.         .++||++||..++.+.+.         
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  159 (257)
T 3tpc_A           89 AGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG---------  159 (257)
T ss_dssp             CCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT---------
T ss_pred             CCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC---------
Confidence            997422          2245778899999999999999987632         358999999987755432         


Q ss_pred             ccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhccccee-eeehhhHhhhhhhH
Q 027007          134 EEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLV-KDIFLLERMRHSCK  208 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  208 (229)
                           ...|+.||+..    +.++++++++|+++++++||.+.+|................ .+. ++++.++|++.++.
T Consensus       160 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~-~p~~~r~~~~~dva~~v~  233 (257)
T 3tpc_A          160 -----QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAAS-VPFPPRLGRAEEYAALVK  233 (257)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CC-SSSSCSCBCHHHHHHHHH
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhc-CCCCCCCCCHHHHHHHHH
Confidence                 24599999844    45566666789999999999999997533222222222222 233 67888999988887


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       234 ~l~  236 (257)
T 3tpc_A          234 HIC  236 (257)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            765

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.97  E-value=1.3e-29  Score=212.40  Aligned_cols=173  Identities=24%  Similarity=0.349  Sum_probs=142.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCC-------C--CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLP-------S--EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~-------~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |+||||||+||||++++++|+++|++|++++|+..... .+.       .  ..+++++++|++|.+++.++++++|+||
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi  107 (352)
T 1sb8_A           28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVL  107 (352)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEEE
Confidence            68999999999999999999999999999999754211 000       0  1368899999999999999999999999


Q ss_pred             EeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      |+|+....  +..++++.+++|+.++.++++++.+.+ .++||++||..+|+.....+.+|+.+..   +.+.|+.+|..
T Consensus       108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~  183 (352)
T 1sb8_A          108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGK---PLSPYAVTKYV  183 (352)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCC---CCSHHHHHHHH
T ss_pred             ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCC---CCChhHHHHHH
Confidence            99996431  224677889999999999999999874 6899999999999876554555555433   24679999999


Q ss_pred             HHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       149 ~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +|.+++.++. .|++++++||+.+|||+..
T Consensus       184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          184 NELYADVFSRCYGFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHHcCCCEEEEEECceeCcCCC
Confidence            9999998864 4999999999999999764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.97  E-value=1.1e-31  Score=214.82  Aligned_cols=196  Identities=18%  Similarity=0.092  Sum_probs=152.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      .+|||||+++||+++++.|+++|++|++.+|+.+++++.    . ....+..+++|++|+++++++++       ++|++
T Consensus        11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   90 (255)
T 4g81_D           11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDIL   90 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            589999999999999999999999999999986543321    1 12467889999999999877654       58999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||...      .+.++|++.+++|+.+++++++++.+++    ..++||++||..+..+.+..              
T Consensus        91 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~--------------  156 (255)
T 4g81_D           91 INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV--------------  156 (255)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc--------------
Confidence            99999732      2445789999999999999999988764    23599999999877554432              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ..|+.||.    +++.++.+++++||+||+|.||.+.+|......  ....+.+ ....+++|++.|+|+++++.||-.
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~-~~~~Pl~R~g~pediA~~v~fL~S  234 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWV-KSSTPSQRWGRPEELIGTAIFLSS  234 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHH-HHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHH-HhCCCCCCCcCHHHHHHHHHHHhC
Confidence            34999998    778888899999999999999999998642211  1111112 233457899999999999988753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.97  E-value=7.2e-29  Score=209.98  Aligned_cols=174  Identities=18%  Similarity=0.152  Sum_probs=141.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC--
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (229)
                      |+||||||+||||++++++|+++|++|++++|+..+..... ..+++++.+|++|.+++.++++++|+|||+|+....  
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~  108 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG  108 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHhCCCCEEEECceecCccc
Confidence            58999999999999999999999999999999876543321 136789999999999999999999999999997542  


Q ss_pred             -CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-----cccCCCCccccccccCcHHHHHHHHHHH
Q 027007           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----YIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                       ...++.+.+++|+.++.++++++.+.+ .++|||+||..+|+....     .+.+|+.+. +..+.+.|+.+|..+|.+
T Consensus       109 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~-~~~~~~~Y~~sK~~~E~~  186 (379)
T 2c5a_A          109 FIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAW-PAEPQDAFGLEKLATEEL  186 (379)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-SBCCSSHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCC-CCCCCChhHHHHHHHHHH
Confidence             145678899999999999999998874 679999999999875432     223333211 112346799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ++.++. .|++++++||+++|||+..
T Consensus       187 ~~~~~~~~gi~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          187 CKHYNKDFGIECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHCCCEEEEEeCceeCcCCC
Confidence            988864 5999999999999999753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=1.4e-29  Score=210.94  Aligned_cols=177  Identities=28%  Similarity=0.441  Sum_probs=136.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC------CCCC-CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|+++.|+.+...      .+.. ..+++++++|++|.+++.++++++|+|||+|
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A   85 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVA   85 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEECC
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEec
Confidence            47999999999999999999999999999999865321      1111 1257889999999999999999999999999


Q ss_pred             cccCCCCCCch-hhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee-cC-CCcccCCCCccccc------cccCcHHH
Q 027007           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG-ST-DGYIADENQVHEEK------YFCTQYER  144 (229)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~-~~-~~~~~~~~~~~~~~------~~~~~Y~~  144 (229)
                      +.......++. +.+++|+.++.++++++.+.+..++|||+||..++. .. .....+|+.+.+..      .+.+.|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (337)
T 2c29_D           86 TPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFV  165 (337)
T ss_dssp             CCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHH
T ss_pred             cccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHH
Confidence            87533323333 589999999999999999875468999999987443 22 22334454332211      12346999


Q ss_pred             HHHHHHHHHHHHH-hcCCCeEEEecCceecCCCC
Q 027007          145 SKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       145 sK~~~e~~~~~~~-~~gi~~~~irpg~i~g~~~~  177 (229)
                      ||.++|.+++++. .+|++++++||+++|||+..
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          166 SKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSC
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            9999999999886 46999999999999999753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=3.7e-29  Score=207.93  Aligned_cols=174  Identities=22%  Similarity=0.189  Sum_probs=142.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++..     .+....+++++.+|++|.+++.+++++  +|+|||+|
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A   94 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   94 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence            68999999999999999999999999999999865421     111123688999999999999998875  69999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +....  +..++.+.+++|+.++.++++++.+.+..++||++||..+|+.....+.+|+.+..+   .+.|+.+|..+|.
T Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           95 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYP---RSPYGVAKLYGHW  171 (335)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             cccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCC---CChhHHHHHHHHH
Confidence            97432  245678899999999999999999874237999999999998766545555544332   4679999999999


Q ss_pred             HHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          152 IALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       152 ~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +++.++. ++++++++||+.+|||+..
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~  198 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESPLRG  198 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCCCCC
Confidence            9998875 4999999999999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=3.3e-29  Score=211.88  Aligned_cols=176  Identities=21%  Similarity=0.254  Sum_probs=134.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++| ++|++++|+..... .+....+++++.+|++|++++.++++++|+|||+|+....
T Consensus        33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~  112 (377)
T 2q1s_A           33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGN  112 (377)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCc
Confidence            689999999999999999999999 99999999765422 2222347899999999999999999999999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccC--CCCccccc-cccCcHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD--ENQVHEEK-YFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~--~~~~~~~~-~~~~~Y~~sK~~~e~~~  153 (229)
                        +..++++.+++|+.++.++++++.+....++||++||..+|+.....+.+  |..+..+. .+.+.|+.+|..+|.++
T Consensus       113 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~  192 (377)
T 2q1s_A          113 QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS  192 (377)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHH
Confidence              12356788999999999999999886236799999999999875543444  44310011 23467999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +.++. .|++++++||+.+|||+.
T Consensus       193 ~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          193 VYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHhCCCEEEEeeccEECCCC
Confidence            98864 499999999999999976

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=4.6e-30  Score=213.64  Aligned_cols=176  Identities=23%  Similarity=0.279  Sum_probs=138.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEE-EccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELV-YGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~-~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++.+.+..      ..+++++ .+|++|.+++.++++++|+|||+|
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   91 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeC
Confidence            589999999999999999999999999999997543221100      1367888 799999999999999999999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC----CcccCCCCcc-------------ccc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH-------------EEK  136 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~~~~~~~-------------~~~  136 (229)
                      +..... .++.+.+++|+.++.++++++.+....++||++||..+|+...    +.+.+|+.+.             .+.
T Consensus        92 ~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~  170 (342)
T 1y1p_A           92 SVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ  170 (342)
T ss_dssp             CCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccc
Confidence            975433 4678899999999999999998643467999999998875321    1334444321             011


Q ss_pred             cccCcHHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCCC
Q 027007          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~~  177 (229)
                      .+.+.|+.+|..+|.+++.+...   +++++++||+++|||...
T Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCC
Confidence            23467999999999999888643   789999999999999754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=3.3e-30  Score=214.67  Aligned_cols=177  Identities=28%  Similarity=0.417  Sum_probs=133.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++|++|+++.|+.++....      ....+++++++|++|++++.++++++|+|||+|+
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~   89 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVAT   89 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEESS
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeCC
Confidence            5899999999999999999999999999999976543321      1113678899999999999999999999999998


Q ss_pred             ccCCCCCCc-hhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceee-ecC-CC--cccCCCCccccc------cccCcHH
Q 027007           75 LVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL-GST-DG--YIADENQVHEEK------YFCTQYE  143 (229)
Q Consensus        75 ~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~-~~~-~~--~~~~~~~~~~~~------~~~~~Y~  143 (229)
                      .......++ ++.+++|+.++.++++++.+.+..++|||+||..++ +.. ..  .+.+|+.+.+..      +....|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  169 (338)
T 2rh8_A           90 PVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYP  169 (338)
T ss_dssp             CCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCT
T ss_pred             ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHH
Confidence            754332333 348999999999999999987546899999998743 221 11  244554322211      1112599


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .||.++|.+++++.+ +|++++++||+.+|||+..
T Consensus       170 ~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             TSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            999999999998864 5999999999999999753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=2.5e-29  Score=207.79  Aligned_cols=177  Identities=27%  Similarity=0.385  Sum_probs=130.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCC------CCC-CCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG------LPS-EGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      ++||||||+||||++++++|+++|++|+++.| +++....      +.. ..+++++++|++|++++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            58999999999999999999999999999998 5432111      111 024678899999999999999999999999


Q ss_pred             CcccCCCCCC-chhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC--CcccCCCCccccc-----cccC-cHH
Q 027007           73 AALVEPWLPD-PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--GYIADENQVHEEK-----YFCT-QYE  143 (229)
Q Consensus        73 a~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~--~~~~~~~~~~~~~-----~~~~-~Y~  143 (229)
                      |+..+....+ +++.+++|+.++.++++++.+.+..++|||+||..++...+  ..+.+|+.+.+..     .+.. .|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            9865333233 34589999999999999998873367999999987543221  2234444322110     1112 599


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .||.++|.+++++.+ +|++++++||+++|||+..
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence            999999999999875 6999999999999999753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.97  E-value=4.8e-31  Score=212.92  Aligned_cols=197  Identities=19%  Similarity=0.158  Sum_probs=149.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      .+|||||+++||++++++|+++|++|++++|+.+++++...  ...+..+++|++|.++++++++       ++|++|||
T Consensus        31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNN  110 (273)
T 4fgs_A           31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVN  110 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            47999999999999999999999999999998765433211  1367889999999999877654       58999999


Q ss_pred             CcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           73 AALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        73 a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ||...      .+.++|++.+++|+.+++++++++.+++.. ++||++||..+..+.+..              ..|+.|
T Consensus       111 AG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~--------------~~Y~as  176 (273)
T 4fgs_A          111 AGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF--------------SVYAAS  176 (273)
T ss_dssp             CCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC--------------HHHHHH
T ss_pred             CCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc--------------hHHHHH
Confidence            99732      233578899999999999999999988633 489999998876554332              349999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh---H-HHHHH--hhcccceeeeehhhHhhhhhhHHHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG---N-LVAKL--QWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |.    +++.++.+++++||+||+|.||.+.+|+.....   . .....  ......+++|++.|+|+++++.||..
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaS  253 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLAS  253 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            98    677778888889999999999999998632211   0 00111  11223457899999999999988764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.97  E-value=2.6e-30  Score=207.47  Aligned_cols=197  Identities=15%  Similarity=0.092  Sum_probs=151.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      .+|||||+++||++++++|+++|++|++.+|+.++.+.+    ....++.++++|++|+++++++++       ++|++|
T Consensus         9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLV   88 (258)
T 4gkb_A            9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLV   88 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            589999999999999999999999999999987643211    112467899999999998876654       589999


Q ss_pred             EeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           71 HTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        71 ~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||||....     +.++|++.+++|+.+++++++++.++++  .++||++||..+..+.+..              ..|+
T Consensus        89 NnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------------~~Y~  154 (258)
T 4gkb_A           89 NNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--------------SGYC  154 (258)
T ss_dssp             ECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC--------------HHHH
T ss_pred             ECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc--------------hHHH
Confidence            99997422     3346888999999999999999988752  3599999999877654432              3499


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh------HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG------NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      .||.    +++.++.+++++||+||+|.||.+.+|......      ......+....+..+|++.|+|+++++.||-.
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS  233 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLS  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            9998    777888889999999999999999998753211      11111222333323589999999999988753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.97  E-value=2.5e-29  Score=209.76  Aligned_cols=174  Identities=28%  Similarity=0.383  Sum_probs=137.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-----CCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|++++|.....     ..+....+++++.+|++|++++.+++++  +|+|||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            5899999999999999999999999999999853211     1111113578999999999999999887  99999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcc----------------cCCCCcccc
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI----------------ADENQVHEE  135 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~----------------~~~~~~~~~  135 (229)
                      +....  +..++++.+++|+.++.++++++.+.+..++|||+||.++|+.....+                .+|..+.  
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~--  159 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL--  159 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC--
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC--
Confidence            96432  124677889999999999999999886334999999999998643322                1222221  


Q ss_pred             ccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          136 KYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                       .+.+.|+.+|..+|.+++.++. .|++++++||+++|||+..
T Consensus       160 -~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          160 -DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCC
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCC
Confidence             1345799999999999998864 4999999999999999753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.96  E-value=7.8e-29  Score=207.00  Aligned_cols=172  Identities=23%  Similarity=0.269  Sum_probs=138.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCC--CCCCCC--CCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~--~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+||||||+||||++++++|+++  |++|++++|+...  .+.+..  ..+++++.+|++|++++.++++++|+|||+|+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            47999999999999999999998  8999999996531  111111  14788999999999999999999999999999


Q ss_pred             ccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC------------cccCCCCccccccccC
Q 027007           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG------------YIADENQVHEEKYFCT  140 (229)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~~~~~~~~~~~~~~  140 (229)
                      ....  +..++++.+++|+.++.++++++.+.+ . +|||+||..+|+....            .+.+|+.+..   +.+
T Consensus        85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~---~~~  159 (348)
T 1oc2_A           85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN---PSS  159 (348)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC---CCS
T ss_pred             ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC---CCC
Confidence            7431  224677899999999999999999885 4 9999999999876421            2334443322   246


Q ss_pred             cHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          141 QYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      .|+.+|..+|.+++.++. .|++++++||+.+|||+..
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH  197 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCC
Confidence            799999999999998864 4999999999999999863

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.96  E-value=6.8e-29  Score=206.35  Aligned_cols=165  Identities=25%  Similarity=0.326  Sum_probs=134.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-CCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~   77 (229)
                      |+||||||+||||++++++|+++|++|++++|+....... ....+++++.+|++|.+++.++++  ++|+|||+|+...
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  100 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYK  100 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence            7899999999999999999999999999999965432211 111378899999999999999998  8999999999754


Q ss_pred             C-CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc--ccCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY--IADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      . +..+++  +++|+.++.++++++.+.+ .++||++||.++|+.....  +.+|+.     .+.+.|+.+|..+|.+++
T Consensus       101 ~~~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-----~~~~~Y~~sK~~~e~~~~  172 (330)
T 2pzm_A          101 DPDDWAED--AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-----APFTSYGISKTAGEAFLM  172 (330)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-----CCCSHHHHHHHHHHHHHH
T ss_pred             CccccChh--HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-----CCCChHHHHHHHHHHHHH
Confidence            3 223343  8999999999999999874 6799999999999765432  344443     124679999999999988


Q ss_pred             HHHhcCCCeEEEecCceecCCC
Q 027007          155 QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       155 ~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+   +++++++||+++|||+.
T Consensus       173 ~~---~~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          173 MS---DVPVVSLRLANVTGPRL  191 (330)
T ss_dssp             TC---SSCEEEEEECEEECTTC
T ss_pred             Hc---CCCEEEEeeeeeECcCC
Confidence            76   79999999999999985

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=8.4e-30  Score=206.55  Aligned_cols=195  Identities=20%  Similarity=0.164  Sum_probs=146.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   92 (271)
T 3tzq_B           13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNN   92 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998765433211  1367889999999999888776       68999999


Q ss_pred             CcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||....        +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              ...
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~  158 (271)
T 3tzq_B           93 AAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM--------------STA  158 (271)
T ss_dssp             CCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS--------------CHH
T ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC--------------ChH
Confidence            997522        224567889999999999999996643   2469999999887654332              245


Q ss_pred             HHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCc-hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLT-TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.||...+    .++.+++++|+++++|+||.+++|.... ......... ....+.++++.++|++.++.||-
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~r~~~p~dvA~~v~~L~  232 (271)
T 3tzq_B          159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIF-ATHHLAGRIGEPHEIAELVCFLA  232 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHH-HTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999555    4555566679999999999999997542 111112222 22334577888999988887764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=1.9e-29  Score=198.01  Aligned_cols=157  Identities=20%  Similarity=0.254  Sum_probs=132.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC-hhhHHhhcCCccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      ||||||||+|+||++++++|+++|++|++++|++++.+..   .+++++++|++| ++++.++++++|+|||+|+...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            9999999999999999999999999999999998765544   478999999999 9999999999999999998743  


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                          ...+++|+.++.++++++.+.+ .++||++||.+++.+.+   .+|    .+..+.+.|+.+|..+|.+++  ...
T Consensus        76 ----~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~---~~e----~~~~~~~~Y~~sK~~~e~~~~--~~~  141 (219)
T 3dqp_A           76 ----KSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEK---WIG----AGFDALKDYYIAKHFADLYLT--KET  141 (219)
T ss_dssp             ----SSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGG---CCS----HHHHHTHHHHHHHHHHHHHHH--HSC
T ss_pred             ----CCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCc---ccc----cccccccHHHHHHHHHHHHHH--hcc
Confidence                2368899999999999998874 67999999987765432   222    111234679999999999886  456


Q ss_pred             CCCeEEEecCceecCCC
Q 027007          160 GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~  176 (229)
                      |++++++|||.+||+..
T Consensus       142 ~i~~~ilrp~~v~g~~~  158 (219)
T 3dqp_A          142 NLDYTIIQPGALTEEEA  158 (219)
T ss_dssp             CCEEEEEEECSEECSCC
T ss_pred             CCcEEEEeCceEecCCC
Confidence            99999999999999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=2.3e-29  Score=202.82  Aligned_cols=189  Identities=17%  Similarity=0.171  Sum_probs=145.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++....    .+.++++|++|++++.++++       ++|+||||||
T Consensus        30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  105 (260)
T 3un1_A           30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP----DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG  105 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST----TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC----ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            689999999999999999999999999999987654332    68899999999999887765       7999999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+....            +...|+.|
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------------~~~~Y~~s  173 (260)
T 3un1_A          106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM------------PSALASLT  173 (260)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC------------CCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC------------ccHHHHHH
Confidence            7422      234577889999999999999986542   34699999998765432211            12459999


Q ss_pred             HHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |...+.+.+    +++++|+++++|+||.+++|.....  ....  .....+.++++.++|++.++.|+
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~--~~~~~p~~r~~~~~dva~av~~L  238 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE--THST--LAGLHPVGRMGEIRDVVDAVLYL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG--GHHH--HHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH--HHHH--HhccCCCCCCcCHHHHHHHHHHh
Confidence            996665554    4455699999999999999975331  1111  22334567888999999999888

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.96  E-value=4.9e-29  Score=203.17  Aligned_cols=159  Identities=26%  Similarity=0.320  Sum_probs=132.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC-ccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-CHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~d~vi~~a~~~~~~   79 (229)
                      |+||||| +||||++++++|+++|++|++++|+.++..     .+++++++|++|.+++.+++++ +|+|||+|+...  
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~--   75 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP-----AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE--   75 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC-----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH--
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC--
Confidence            5899999 699999999999999999999999876532     3688999999999999998887 999999998742  


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                       .++...+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+ +.+   
T Consensus        76 -~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~-~~~---  146 (286)
T 3gpi_A           76 -YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIA---KDFSGKRMLEAEAL-LAA---  146 (286)
T ss_dssp             -HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCC---CSHHHHHHHHHHHH-GGG---
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCC---CChhhHHHHHHHHH-Hhc---
Confidence             3456788999999999999998764 68999999999999876666666655433   46799999999999 653   


Q ss_pred             CCCeEEEecCceecCCCC
Q 027007          160 GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~~  177 (229)
                       ++++++||+++|||+..
T Consensus       147 -~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          147 -YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             -SSEEEEEECEEEBTTBC
T ss_pred             -CCeEEEecccccCCCch
Confidence             89999999999999863

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1.5e-30  Score=209.51  Aligned_cols=195  Identities=22%  Similarity=0.189  Sum_probs=144.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....  ...+.++++|++|++++.++++       ++|+||||
T Consensus        10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~   89 (259)
T 4e6p_A           10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNN   89 (259)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998654332111  1367889999999999887775       79999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+.    .++||++||..++.+.+.              ...|
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  155 (259)
T 4e6p_A           90 AALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL--------------VAIY  155 (259)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------BHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC--------------ChHH
Confidence            997422      3346778899999999999999977641    359999999887654332              2459


Q ss_pred             HHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHH----------HHhhcccceeeeehhhHhhhhhhH
Q 027007          143 ERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVA----------KLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       143 ~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      +.||...+.+.    .+++++|+++++|+||.++||..........          ........+.++++.++|++.++.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  235 (259)
T 4e6p_A          156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            99999655554    5555679999999999999996422111111          011122234577888999988877


Q ss_pred             HH
Q 027007          209 FL  210 (229)
Q Consensus       209 ~l  210 (229)
                      ||
T Consensus       236 ~L  237 (259)
T 4e6p_A          236 FL  237 (259)
T ss_dssp             HT
T ss_pred             HH
Confidence            65

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.96  E-value=2e-28  Score=204.57  Aligned_cols=172  Identities=19%  Similarity=0.251  Sum_probs=138.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC------CCC----CC--CCCCeEEEEccCCChhhHHhhcC--Cc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISG----LP--SEGALELVYGDVTDYRSLVDACF--GC   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~------~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~--~~   66 (229)
                      |+||||||+||||++++++|+++|++|++++|....      ...    +.  ...+++++.+|++|.+++.++++  ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            589999999999999999999999999999986533      110    00  01367889999999999999888  89


Q ss_pred             cEEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |+|||+|+....  +..++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+  ..+.|+.
T Consensus        83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p--~~~~Y~~  159 (348)
T 1ek6_A           83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGG--CTNPYGK  159 (348)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCC--CSSHHHH
T ss_pred             CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCC--CCCchHH
Confidence            999999986432  224677899999999999999998874 67999999999998755555555544322  1467999


Q ss_pred             HHHHHHHHHHHHHhcC--CCeEEEecCceecCC
Q 027007          145 SKAVADKIALQAASEG--LPIVPVYPGVIYGPG  175 (229)
Q Consensus       145 sK~~~e~~~~~~~~~g--i~~~~irpg~i~g~~  175 (229)
                      +|..+|.+++.++..+  ++++++||+++|||.
T Consensus       160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCCcceEEEeeccccCCC
Confidence            9999999999987545  999999999999994

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=1.9e-29  Score=203.98  Aligned_cols=196  Identities=19%  Similarity=0.174  Sum_probs=146.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++++.+.. ..+.++++|++|.+++.++++       ++|+||||||
T Consensus        18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg   96 (266)
T 3p19_A           18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG   96 (266)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            58999999999999999999999999999998765544433 268899999999999877765       6899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ...|+.|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~--------------~~~Y~as  162 (266)
T 3p19_A           97 MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD--------------HAAYCGT  162 (266)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC--------------CchHHHH
Confidence            7422      223577889999999999999887543   2469999999887754332              2459999


Q ss_pred             HHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          146 KAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       146 K~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |...    +.++.+++++|+++++|+||.+.+|...... ............+++++..++|++.++.|+-.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~  234 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQ  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHc
Confidence            9955    4555666677999999999999998643211 11111111112234677889999988877643

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=3.9e-28  Score=202.04  Aligned_cols=163  Identities=22%  Similarity=0.251  Sum_probs=131.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~   77 (229)
                      |+||||||+||||++++++|+++|++|++++|+..... .+....+++++.+|++|++++.+++++  +|+|||+|+...
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  101 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYK  101 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceecC
Confidence            68999999999999999999999999999999754321 122114788999999999999999887  999999999754


Q ss_pred             C-CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee----cCCCcccCCCCcccccccc-CcHHHHHHHHHH
Q 027007           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG----STDGYIADENQVHEEKYFC-TQYERSKAVADK  151 (229)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~  151 (229)
                      . +..+++  +++|+.++.++++++.+.+ .++||++||..+|+    .... +.+|+.     .+. +.|+.+|..+|.
T Consensus       102 ~~~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-----~p~~~~Y~~sK~~~E~  172 (333)
T 2q1w_A          102 DPDDWYND--TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV-RLDHPR-----NPANSSYAISKSANED  172 (333)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB-CTTSCC-----CCTTCHHHHHHHHHHH
T ss_pred             CCccCChH--HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC-CcCCCC-----CCCCCchHHHHHHHHH
Confidence            3 222333  8999999999999999874 68999999999997    4333 344443     123 579999999999


Q ss_pred             HHHH-HHhcCCCeEEEecCceecCCC
Q 027007          152 IALQ-AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       152 ~~~~-~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +++. +.    +++++||+++|||+.
T Consensus       173 ~~~~s~~----~~~ilR~~~v~gp~~  194 (333)
T 2q1w_A          173 YLEYSGL----DFVTFRLANVVGPRN  194 (333)
T ss_dssp             HHHHHTC----CEEEEEESEEESTTC
T ss_pred             HHHhhhC----CeEEEeeceEECcCC
Confidence            9887 65    799999999999983

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=6.1e-30  Score=206.42  Aligned_cols=195  Identities=24%  Similarity=0.282  Sum_probs=145.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC--CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    ..  ...+.++++|++|++++.++++       ++|+
T Consensus        12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (262)
T 3pk0_A           12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV   91 (262)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999986543221    11  1368899999999999887765       7999


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..+. .+.+.              
T Consensus        92 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------------  157 (262)
T 3pk0_A           92 VCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG--------------  157 (262)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT--------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC--------------
Confidence            9999997422      234577789999999999999998763   34699999998653 22211              


Q ss_pred             cCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          139 CTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       139 ~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ...|+.||...+    .++.+++++|+++++|+||.+++|...... .+... .. ...+.++++.++|++.++.||-.
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~-~~~p~~r~~~p~dva~~v~~L~s  234 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIAS-MA-RSIPAGALGTPEDIGHLAAFLAT  234 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHH-HH-TTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHH-HH-hcCCCCCCcCHHHHHHHHHHHhC
Confidence            245999999555    455556667999999999999998532222 22222 22 22345678889999988877643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.96  E-value=5.8e-29  Score=211.39  Aligned_cols=172  Identities=26%  Similarity=0.354  Sum_probs=139.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCCCCC---------CCC-------CC---CCC---eEEEEccCCChh
Q 027007            1 MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDI---------SGL-------PS---EGA---LELVYGDVTDYR   57 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~-~~g~~V~~~~r~~~~~---------~~~-------~~---~~~---~~~~~~D~~~~~   57 (229)
                      |+||||||+||||++++++|+ ++|++|++++|+....         +.+       ..   ...   ++++.+|++|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            899999999999999999999 9999999999975432         111       00   113   889999999999


Q ss_pred             hHHhhcC--C-ccEEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-------Cc
Q 027007           58 SLVDACF--G-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-------GY  125 (229)
Q Consensus        58 ~~~~~~~--~-~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-------~~  125 (229)
                      ++.++++  + +|+|||+|+....  +..++++.+++|+.++.++++++.+.. .++|||+||.++|+...       ..
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccccc
Confidence            9998887  5 9999999997432  224677899999999999999998874 67999999999987654       33


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHHHHHHhc-CCCeEEEecCceecCCC
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-gi~~~~irpg~i~g~~~  176 (229)
                      +.+|+.+..   +.+.|+.+|..+|.+++.++.. |++++++||+++|||+.
T Consensus       162 ~~~E~~~~~---p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          162 PIDINAKKS---PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (397)
T ss_dssp             CBCTTSCCB---CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             CcCccCCCC---CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence            445544432   2467999999999999988754 99999999999999963

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.96  E-value=4.4e-28  Score=203.37  Aligned_cols=168  Identities=19%  Similarity=0.236  Sum_probs=138.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCC--CCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++| ++|++++|+....  ..+.   .+. +.+|++|.+.+.++++     ++|+|||+
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc---Cce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            579999999999999999999999 9999999976432  1221   223 6789999999988886     59999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      |+....+..++++.+++|+.++.++++++.+.+ . +||++||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+
T Consensus       123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKP---LNVFGYSKFLFDEY  197 (357)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCC---SSHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCC---CChhHHHHHHHHHH
Confidence            998655556788899999999999999999875 5 999999999998765545555543332   46799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ++.++. .|++++++||+++|||+..
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCT
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCC
Confidence            999874 4899999999999999753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=1.1e-29  Score=203.23  Aligned_cols=195  Identities=18%  Similarity=0.174  Sum_probs=148.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ......+++|++|.+++.++++       ++|+||||
T Consensus        11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n   90 (248)
T 3op4_A           11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNN   90 (248)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998654332211  1246789999999999887765       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.++              ...|+
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  156 (248)
T 3op4_A           91 AGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG--------------QANYA  156 (248)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------CHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC--------------ChHHH
Confidence            997432      334678899999999999999997753   2469999999877654332              24599


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||.    +++.++.+++++|+++++|+||.+.+|............. ....+.+++..|+|++.++.|+-
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~p~~r~~~p~dva~~v~~L~  227 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTAT-LAQVPAGRLGDPREIASAVAFLA  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHH-HHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHc
Confidence            9999    5566667777789999999999999997543322222211 22234577889999988877654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=1.5e-29  Score=202.32  Aligned_cols=195  Identities=18%  Similarity=0.180  Sum_probs=145.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+. ++.+.+    . ....+.++++|++|.+++.++++       ++|+
T Consensus         6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A            6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999998854 221111    0 12367889999999999887765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  151 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG--------------Q  151 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC--------------C
Confidence            9999997422      234577899999999999999996643   3469999999877654332              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||.    +++.++.+++++|+++++++||.+++|.............. ...+.++++.++|++.+..|+-
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQML-TQIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHH-TTCTTCSCBCHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHh
Confidence            45999999    45555666667899999999999999976443332222222 2334578889999888876653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.96  E-value=9.4e-28  Score=199.90  Aligned_cols=174  Identities=17%  Similarity=0.174  Sum_probs=142.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-----CCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a   73 (229)
                      |+||||||+||||++++++|+++|++|++++|+.++.+.     +....+++++.+|++|.+++.+++++  +|+|||+|
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   83 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA   83 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence            689999999999999999999999999999998754321     11123688999999999999998875  69999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +....  +..++++.+++|+.++.++++++.+.+..++||++||.++|+.....+.+|..+..+   .+.|+.+|..+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~---~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           84 AQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYP---RSPYAVAKLFGHW  160 (345)
T ss_dssp             CCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             CCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCC---CChhHHHHHHHHH
Confidence            97432  245688899999999999999999764227999999999998765545555544332   4679999999999


Q ss_pred             HHHHHHhc-CCCeEEEecCceecCCCC
Q 027007          152 IALQAASE-GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       152 ~~~~~~~~-gi~~~~irpg~i~g~~~~  177 (229)
                      +++.++.. +++++++|+.++|||+..
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~  187 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLRG  187 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCCC
Confidence            99988754 899999999999999753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=5.4e-30  Score=206.06  Aligned_cols=195  Identities=19%  Similarity=0.180  Sum_probs=145.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   93 (256)
T 3gaf_A           14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVL   93 (256)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999865432211     12468899999999999877765       68999


Q ss_pred             EEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        70 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||||....     +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              ...
T Consensus        94 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  159 (256)
T 3gaf_A           94 VNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR--------------MAS  159 (256)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT--------------CHH
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC--------------chH
Confidence            999997432     224577889999999999999997653   2459999999887654332              245


Q ss_pred             HHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.||...+    .++.+++++|+++++++||.+.+|..... ....... .....+.++++.++|++.++.|+-
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~p~~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERA-MLKHTPLGRLGEAQDIANAALFLC  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHH-HHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHH-HHhcCCCCCCCCHHHHHHHHHHHc
Confidence            999999555    55556667799999999999999853211 1111111 223344577889999998877764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.96  E-value=2.1e-29  Score=204.79  Aligned_cols=198  Identities=21%  Similarity=0.176  Sum_probs=148.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999999999999999999999999999876543321     11367889999999999988776       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+.    .++||++||..++......            .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~------------~  180 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ------------Q  180 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC------------C
Confidence            9999997432      2345778899999999999999877541    2689999998765432110            1


Q ss_pred             cCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          139 CTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       139 ~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ...|+.||...+    .++++++++|+++++|+||.+.++...........  +....+.++++.|+|++.++.||-.
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~--~~~~~p~~r~~~pedvA~~v~fL~s  256 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHAL--WEPKIPLGRMGRPEELTGLYLYLAS  256 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHH--HGGGSTTSSCBCGGGSHHHHHHHHS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHH--HHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            245999999554    55556666799999999999999976443332222  2233345778899999988877643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.96  E-value=3.7e-29  Score=201.19  Aligned_cols=195  Identities=22%  Similarity=0.166  Sum_probs=145.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC------CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~   75 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++..... ...+.++++|++|.+++.++++      ++|+||||||.
T Consensus        11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~   89 (257)
T 3tl3_A           11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGT   89 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            5899999999999999999999999999999643221111 2368899999999999887765      79999999996


Q ss_pred             c----------CCCCCCchhhhHhhHHHHHHHHHHHHhcCC-----------CceEEEEccceeeecCCCcccCCCCccc
Q 027007           76 V----------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT-----------VEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        76 ~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----------~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      .          +.+.++|++.+++|+.+++++++++.+.+.           .++||++||..++.+.+.          
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  159 (257)
T 3tl3_A           90 GNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG----------  159 (257)
T ss_dssp             SHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH----------
T ss_pred             CCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC----------
Confidence            3          133456888999999999999999987642           248999999887754322          


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                          ...|+.||.    +++.++.+++++|+++++|+||.+.+|....................++++.++|++.++.|+
T Consensus       160 ----~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l  235 (257)
T 3tl3_A          160 ----QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHI  235 (257)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHH
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHH
Confidence                245999999    555666677778999999999999999754333222232333333237788999999888776


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       236 ~  236 (257)
T 3tl3_A          236 I  236 (257)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.96  E-value=2.3e-28  Score=199.11  Aligned_cols=154  Identities=19%  Similarity=0.252  Sum_probs=131.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++|++|++++|.                ++|++|.+++.++++  ++|+|||+|+....
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            589999999999999999999999999999993                479999999999988  69999999997542


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..++.+.+++|+.++.++++++.+.+ . ++||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~  144 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPAP---INIYGASKYAGEQFVKEL  144 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence              235788899999999999999999885 3 799999999998776566666655433   467999999999999886


Q ss_pred             HhcCCCeEEEecCceecCCCCc
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~  178 (229)
                      ..   +++++||+.+|||+...
T Consensus       145 ~~---~~~ilR~~~v~G~~~~~  163 (287)
T 3sc6_A          145 HN---KYFIVRTSWLYGKYGNN  163 (287)
T ss_dssp             CS---SEEEEEECSEECSSSCC
T ss_pred             CC---CcEEEeeeeecCCCCCc
Confidence            53   68999999999997543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.96  E-value=1.7e-29  Score=202.97  Aligned_cols=197  Identities=22%  Similarity=0.228  Sum_probs=148.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+++..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   89 (255)
T 4eso_A           10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN   89 (255)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999998654333211  1367899999999998876654       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ||....      +.++|++.+++|+.+++++++++.+.++ .++||++||..++.+.+.              ...|+.|
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  155 (255)
T 4eso_A           90 AGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG--------------MSVYSAS  155 (255)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT--------------BHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC--------------chHHHHH
Confidence            997432      3346778899999999999999988753 249999999987755432              2459999


Q ss_pred             HHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHH--HhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          146 KAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAK--LQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       146 K~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |...+    .++.+++++|+++++|+||.+.+|.....   ......  .......+.++++.|+|++.++.||-.
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence            99554    45555666799999999999999964321   111111  112233456788899999998887643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.96  E-value=1.1e-27  Score=203.87  Aligned_cols=175  Identities=20%  Similarity=0.215  Sum_probs=134.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC----------CCCCC------------CCCCeEEEEccCCChhh
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLP------------SEGALELVYGDVTDYRS   58 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~----------~~~~~------------~~~~~~~~~~D~~~~~~   58 (229)
                      |+||||||+||||++++++|+++|++|++++|....          +....            ...+++++.+|++|.++
T Consensus        12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~   91 (404)
T 1i24_A           12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   91 (404)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHH
Confidence            689999999999999999999999999999875321          00000            01367899999999999


Q ss_pred             HHhhcCC--ccEEEEeCcccCC--CCCCc---hhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCC
Q 027007           59 LVDACFG--CHVIFHTAALVEP--WLPDP---SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        59 ~~~~~~~--~d~vi~~a~~~~~--~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                      +.+++++  +|+|||+||....  ...++   ...+++|+.++.++++++.+.+..++||++||.++|+.... +.+|..
T Consensus        92 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~-~~~E~~  170 (404)
T 1i24_A           92 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGY  170 (404)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSE
T ss_pred             HHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCC-CCCccc
Confidence            9998887  9999999997432  11233   34789999999999999998753259999999999986543 233321


Q ss_pred             cc-----------ccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          132 VH-----------EEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       132 ~~-----------~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +.           .+..+.+.|+.+|..+|.+++.++. .|++++++||+++|||+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          171 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred             cccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCC
Confidence            10           1223356799999999999988764 499999999999999975

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=2.6e-29  Score=205.81  Aligned_cols=195  Identities=24%  Similarity=0.275  Sum_probs=144.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCC--CCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSE--GALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    ...  ..+.++++|++|.+++.++++       ++|+
T Consensus        43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  122 (293)
T 3rih_A           43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV  122 (293)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999999987654321    111  368899999999998877654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++ .+.+.              
T Consensus       123 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~--------------  188 (293)
T 3rih_A          123 VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG--------------  188 (293)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT--------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC--------------
Confidence            9999997422      234577889999999999999986542   24699999998753 22211              


Q ss_pred             cCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          139 CTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       139 ~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ...|+.||...+    .++.+++++|+++++|+||.+++|...... .+... . ....+.++++.++|++.++.||-.
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~-~~~~p~~r~~~p~dvA~~v~fL~s  265 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISG-M-ARSIPMGMLGSPVDIGHLAAFLAT  265 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHH-H-HTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHH-H-HhcCCCCCCCCHHHHHHHHHHHhC
Confidence            245999999554    555566677999999999999998532211 12222 1 122345778889999888877643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.96  E-value=1.2e-28  Score=202.62  Aligned_cols=164  Identities=23%  Similarity=0.232  Sum_probs=131.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++|+      +.....      ..++.+++|++|++++.+++++  +|+|||+|+....
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~   74 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADGAG------LPGEDW------VFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGG   74 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTTTC------CTTCEE------EECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhcCC------cccccc------cccCceecccCCHHHHHHHHhhcCCCEEEECceeccc
Confidence            6899999999999999999999998      111100      1233457899999999999886  9999999997542


Q ss_pred             ---CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccc-cccccC-cHHHHHHHHHHHH
Q 027007           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCT-QYERSKAVADKIA  153 (229)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~-~~~~~~-~Y~~sK~~~e~~~  153 (229)
                         +..++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+.. +..+.. .|+.+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  153 (319)
T 4b8w_A           75 LFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQN  153 (319)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHH
Confidence               345677899999999999999999885 6899999999999887666666665321 112223 5999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.+.+ .|++++++||+++|||+..
T Consensus       154 ~~~~~~~~~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          154 RAYFQQYGCTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             HHHHHHHCCEEEEEEECEEECTTCC
T ss_pred             HHHHHhhCCCEEEEeeccccCCCCC
Confidence            98864 4999999999999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.96  E-value=1.1e-28  Score=203.18  Aligned_cols=169  Identities=22%  Similarity=0.223  Sum_probs=137.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~   76 (229)
                      |+||||||+||||++++++|+++  |++|++++|+..+.. +.  .+++++.+|++|.+++.++++  ++|+|||+|+..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--CCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            58999999999999999999999  899999999765421 11  246789999999999999988  899999999864


Q ss_pred             CC-CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-cccCCCCccccccccCcHHHHHHHHHHHHH
Q 027007           77 EP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIAL  154 (229)
Q Consensus        77 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (229)
                      .. ...++++.+++|+.++.++++++.+.+ .++|||+||..+|+.... .+.+|..+..   +.+.|+.+|..+|.+++
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~---~~~~Y~~sK~~~e~~~~  155 (312)
T 2yy7_A           80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIME---PSTVYGISKQAGERWCE  155 (312)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCC---CCSHHHHHHHHHHHHHH
T ss_pred             CCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCC---CCchhHHHHHHHHHHHH
Confidence            22 124677889999999999999999874 679999999999986432 3344443322   24679999999999998


Q ss_pred             HHHh-cCCCeEEEecCceecCCC
Q 027007          155 QAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       155 ~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      .++. +|++++++||+.+|||..
T Consensus       156 ~~~~~~~~~~~~lrp~~v~g~~~  178 (312)
T 2yy7_A          156 YYHNIYGVDVRSIRYPGLISWST  178 (312)
T ss_dssp             HHHHHHCCEEECEEECEEECSSS
T ss_pred             HHHHhcCCcEEEEeCCeEecCCC
Confidence            8764 499999999999999753

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=1.5e-29  Score=204.66  Aligned_cols=195  Identities=18%  Similarity=0.237  Sum_probs=143.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+++..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  108 (266)
T 3grp_A           29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNN  108 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998654332211  1368899999999999887765       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~  174 (266)
T 3grp_A          109 AGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG--------------QTNYC  174 (266)
T ss_dssp             CCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C--------------HHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC--------------chhHH
Confidence            997422      224678889999999999999887653   2469999999877654332              24599


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||.    +++.++++++++|+++++|+||.+.+|............ .....+.++++.++|++.++.|+-
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~p~~r~~~~edvA~~v~~L~  245 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEA-IMAMIPMKRMGIGEEIAFATVYLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHH-HHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999    555666677778999999999999998532222211222 223345678889999998887764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=6.1e-28  Score=194.87  Aligned_cols=162  Identities=20%  Similarity=0.223  Sum_probs=136.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (229)
                      +||||||+||||++++++|+++|++|++++|++.+..  .  .+++++.+|++|++++.++++++|+|||+|+..  ...
T Consensus         4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--~~~   77 (267)
T 3ay3_A            4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--E--AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS--VER   77 (267)
T ss_dssp             EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--C--TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC--SCC
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--C--CCccEEEccCCCHHHHHHHHcCCCEEEECCcCC--CCC
Confidence            7999999999999999999999999999999865421  1  367889999999999999999999999999875  235


Q ss_pred             CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-CcccCCCCccccccccCcHHHHHHHHHHHHHHHH-hc
Q 027007           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (229)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (229)
                      ++++.+++|+.++.++++++.+.+ .++||++||..+|+..+ ..+.+|+.+..   +.+.|+.+|..+|.+++.+. .+
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~  153 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRR---PDSLYGLSKCFGEDLASLYYHKF  153 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCC---CCChHHHHHHHHHHHHHHHHHHc
Confidence            678899999999999999998874 67999999999987643 23445544332   24679999999999998876 45


Q ss_pred             CCCeEEEecCceec
Q 027007          160 GLPIVPVYPGVIYG  173 (229)
Q Consensus       160 gi~~~~irpg~i~g  173 (229)
                      |++++++||+++|+
T Consensus       154 gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          154 DIETLNIRIGSCFP  167 (267)
T ss_dssp             CCCEEEEEECBCSS
T ss_pred             CCCEEEEeceeecC
Confidence            99999999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.96  E-value=3.9e-28  Score=195.34  Aligned_cols=192  Identities=17%  Similarity=0.111  Sum_probs=145.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++.  +.   ...++++|++|.+++.++++       ++|++|||||
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           13 RALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LP---EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SC---TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             EEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CC---cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            589999999999999999999999999999975431  11   23468999999998866654       5899999998


Q ss_pred             ccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           75 LVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        75 ~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ....        +.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.+..             ...|+
T Consensus        88 ~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~-------------~~~Y~  154 (261)
T 4h15_A           88 GSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES-------------TTAYA  154 (261)
T ss_dssp             CCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-------------CHHHH
T ss_pred             CCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-------------cHHHH
Confidence            6321        234688899999999999999998764   23599999998765443210             23499


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH-----------HHHHHh--hcccceeeeehhhHhhhhh
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN-----------LVAKLQ--WKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~~~  206 (229)
                      .||.    +++.++.+++++||+||+|.||.+.+|.......           ...+..  .....+++|++.|+|++++
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~  234 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANL  234 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            9998    7778888888999999999999999985321111           011111  1233467899999999999


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.||-
T Consensus       235 v~fLa  239 (261)
T 4h15_A          235 IAFLA  239 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.96  E-value=7.8e-30  Score=204.08  Aligned_cols=196  Identities=18%  Similarity=0.184  Sum_probs=146.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....  ...+.++++|++|.+++.++++       ++|+||||
T Consensus         8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   87 (247)
T 3rwb_A            8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNN   87 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            68999999999999999999999999999998654332111  2367889999999999887765       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.              ...|
T Consensus        88 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  153 (247)
T 3rwb_A           88 ASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN--------------MAAY  153 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT--------------CHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC--------------chhh
Confidence            997422      334677899999999999999976653    2469999999887655432              2459


Q ss_pred             HHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.||.    +++.++.+++++|+++++|+||.+.+++.................++++.+.|+|++.++.||-
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~  226 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHh
Confidence            99997    5566666777789999999999999975322111111111222234567888999998887764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.96  E-value=5.8e-28  Score=199.60  Aligned_cols=161  Identities=20%  Similarity=0.232  Sum_probs=132.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++|++|++++|+.               .+|++|.+++.++++  ++|+|||+|+....
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   68 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG   68 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence            5899999999999999999999999999988752               369999999999998  89999999987532


Q ss_pred             ---CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc--ccccccCcHHHHHHHHHHHH
Q 027007           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~~~e~~~  153 (229)
                         +..++.+.+++|+.++.++++++.+.+ .++|||+||..+|+.....+.+|..+.  +..+..+.|+.+|..+|.++
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           69 IVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence               224667889999999999999999874 679999999999987554445554321  11111247999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.++. .|++++++||+++|||+..
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHhCCCEEEEEeCCcCCcCCC
Confidence            98864 4899999999999999764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=1e-27  Score=195.22  Aligned_cols=196  Identities=17%  Similarity=0.111  Sum_probs=143.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----------------C-CCCCCeEEEEccCCChhhHHhhcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----------------L-PSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----------------~-~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|++.....                + .....+.++++|++|.+++.++++
T Consensus        12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (281)
T 3s55_A           12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVA   91 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            68999999999999999999999999999997432100                0 011368899999999999887765


Q ss_pred             -------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccC
Q 027007           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIAD  128 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~  128 (229)
                             ++|+||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.    
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  167 (281)
T 3s55_A           92 EAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA----  167 (281)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC----
Confidence                   68999999997421      234577889999999999999987643   2469999999887754332    


Q ss_pred             CCCccccccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhH--------------HHHHHhhcc
Q 027007          129 ENQVHEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGN--------------LVAKLQWKK  190 (229)
Q Consensus       129 ~~~~~~~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~--------------~~~~~~~~~  190 (229)
                                ...|+.||...+.+    +.+++++|+++++|+||++++|.......              .........
T Consensus       168 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (281)
T 3s55_A          168 ----------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASL  237 (281)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHH
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhh
Confidence                      24599999955554    45555679999999999999997532110              001111111


Q ss_pred             cceeeeehhhHhhhhhhHHHH
Q 027007          191 VDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ....+++..|+|++.++.|+-
T Consensus       238 ~~~~~~~~~p~dvA~~v~~L~  258 (281)
T 3s55_A          238 HLQYAPFLKPEEVTRAVLFLV  258 (281)
T ss_dssp             CSSSCSCBCHHHHHHHHHHHH
T ss_pred             hccCcCCCCHHHHHHHHHHHc
Confidence            111267888999988877764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.96  E-value=3e-29  Score=204.22  Aligned_cols=196  Identities=17%  Similarity=0.143  Sum_probs=131.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+. ++.+..    . ....+.++++|++|.+++.++++       ++|+
T Consensus        31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999743 221111    0 12368899999999999887765       6899


Q ss_pred             EEEeCcccC--C------CCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccc
Q 027007           69 IFHTAALVE--P------WLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        69 vi~~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      ||||||...  .      +.++|++.+++|+.++.++++++.+.+.      .++||++||..++.+.+..         
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---------  181 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER---------  181 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC---------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc---------
Confidence            999999721  1      3346778899999999999999877641      3589999998877543322         


Q ss_pred             cccccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          135 EKYFCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                           ..|+.||+..+.    ++.+++++|+++++|+||.+.+|..................++++++.|+|++.++.||
T Consensus       182 -----~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  256 (280)
T 4da9_A          182 -----LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGL  256 (280)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHH
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHH
Confidence                 349999995554    45555567999999999999999753322221222222234567888999998887776


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       257 ~  257 (280)
T 4da9_A          257 A  257 (280)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.96  E-value=9.8e-29  Score=202.27  Aligned_cols=196  Identities=17%  Similarity=0.189  Sum_probs=145.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++...     + .....+.++++|++|.+++.++++       ++|+
T Consensus        49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999998642110     0 112368899999999999877765       6899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||||....       +.++|++.+++|+.++.++++++.+.+. .++||++||..++.+.+..              .
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  194 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL--------------I  194 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC--------------H
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC--------------h
Confidence            9999996421       2346788999999999999999998763 3499999999877654322              3


Q ss_pred             cHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||...+.    ++.+++++|+++++|+||.+++|..................+.++++.++|++.++.|+-
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  269 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLA  269 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHh
Confidence            49999995554    455566679999999999999986311100011111233345678888999988877654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=3.2e-29  Score=202.18  Aligned_cols=194  Identities=14%  Similarity=0.129  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..      ...+.++++|++|++++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (263)
T 3ai3_A            9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADI   88 (263)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999998644322100      2367889999999999887775       7899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              .
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (263)
T 3ai3_A           89 LVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY--------------E  154 (263)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC--------------c
Confidence            9999997421      223577889999999999999987643   2469999999987754322              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch------------hHHHHHHhhcccceeeeehhhHhh
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT------------GNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ..|+.||...+.+.    .++.++|+++++|+||+++||+....            ...... +.....+.+++..++|+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~dv  233 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQS-VADEHAPIKRFASPEEL  233 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHH-HHHHHCTTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHH-HHhcCCCCCCCcCHHHH
Confidence            35999999655554    45556799999999999999863211            011111 11110234567888888


Q ss_pred             hhhhHHH
Q 027007          204 RHSCKFL  210 (229)
Q Consensus       204 ~~~~~~l  210 (229)
                      +.+..|+
T Consensus       234 A~~~~~l  240 (263)
T 3ai3_A          234 ANFFVFL  240 (263)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8777665

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.95  E-value=5.5e-28  Score=201.20  Aligned_cols=172  Identities=23%  Similarity=0.335  Sum_probs=135.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-C-----CCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-P-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~-----~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++|++|++++|........ .     ....++++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            8999999999999999999999999999998754321110 0     01257889999999999988886  59999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      ||....  ...++.+.+++|+.++.++++++.+.+ .++||++||..+|+.....+.+|..+..  ++.+.|+.+|.++|
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~--~~~~~Y~~sK~~~e  157 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTG--TPQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCC--CCSSHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCC--CCCChHHHHHHHHH
Confidence            986421  223567789999999999999998874 6799999999999865444445544321  12467999999999


Q ss_pred             HHHHHHHh-c-CCCeEEEecCceecCC
Q 027007          151 KIALQAAS-E-GLPIVPVYPGVIYGPG  175 (229)
Q Consensus       151 ~~~~~~~~-~-gi~~~~irpg~i~g~~  175 (229)
                      .+++.++. . +++++++||+++|||.
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          158 QILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHhcCCCceEEEeeceecCCC
Confidence            99998864 3 7999999999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=2.8e-29  Score=202.69  Aligned_cols=196  Identities=16%  Similarity=0.164  Sum_probs=145.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   92 (264)
T 3ucx_A           13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV   92 (264)
T ss_dssp             EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            6899999999999999999999999999999865432211     12368899999999999877765       68999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....       +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.              ..
T Consensus        93 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  158 (264)
T 3ucx_A           93 INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK--------------YG  158 (264)
T ss_dssp             EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT--------------CH
T ss_pred             EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc--------------cH
Confidence            999986321       2245778899999999999999877641  259999999877654332              23


Q ss_pred             cHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHH--------H--HHhhcccceeeeehhhHhhhhh
Q 027007          141 QYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV--------A--KLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       141 ~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                      .|+.||+..    +.++.+++++|+++++|+||.+++|.........        .  ........+.++++.|+|++.+
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  238 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHH
Confidence            599999844    4555666678999999999999998632111000        0  1112233456788899999988


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.||-
T Consensus       239 v~~L~  243 (264)
T 3ucx_A          239 ILFMA  243 (264)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            77764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.95  E-value=1.6e-29  Score=205.95  Aligned_cols=194  Identities=21%  Similarity=0.200  Sum_probs=144.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-------CCC-CCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.       ... ...+.++++|++|.+++.++++       ++
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   92 (281)
T 3svt_A           13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRL   92 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999998653221       111 1267889999999999877765       58


Q ss_pred             cEEEEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           67 HVIFHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        67 d~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |+||||||...       .+.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.            
T Consensus        93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  160 (281)
T 3svt_A           93 HGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW------------  160 (281)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC------------
Confidence            99999999621       1234577889999999999999998764   2349999999987754332            


Q ss_pred             cccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          137 YFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                        ...|+.||...+.+    +.+++++|+++++++||.+++|.....   ......  .....+.++++.++|++.++.|
T Consensus       161 --~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~p~~r~~~~~dva~~~~~  236 (281)
T 3svt_A          161 --FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSD--YAMCTPLPRQGEVEDVANMAMF  236 (281)
T ss_dssp             --CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHH--HHHHCSSSSCBCHHHHHHHHHH
T ss_pred             --ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHH--HHhcCCCCCCCCHHHHHHHHHH
Confidence              24599999955555    455667789999999999999964221   111111  1223345778889999988777


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       237 l~  238 (281)
T 3svt_A          237 LL  238 (281)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.95  E-value=5.9e-28  Score=197.66  Aligned_cols=156  Identities=19%  Similarity=0.200  Sum_probs=131.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+ +|++|++++|+..            .+.+|++|++++.+++++  +|+|||+|+....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            899999999999999999999 8999999999752            247899999999998875  9999999987432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..++++.+++|+.++.++++++.+.+ . ++||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~  142 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSP---LNVYGKTKLAGEKALQDN  142 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCC---SSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHHHh
Confidence              345778899999999999999998875 3 899999999998766545555544332   467999999999999886


Q ss_pred             HhcCCCeEEEecCceecCCCC
Q 027007          157 ASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~  177 (229)
                      +.   +++++||+++|||+..
T Consensus       143 ~~---~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          143 CP---KHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             CS---SEEEEEECSEECSSSC
T ss_pred             CC---CeEEEeeeeecCCCcC
Confidence            53   7999999999999764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.95  E-value=2.3e-27  Score=203.69  Aligned_cols=172  Identities=26%  Similarity=0.358  Sum_probs=131.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC---CCC--------------CCCCCeEEEEccCCChhhHHhhc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI---SGL--------------PSEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~--------------~~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      |+||||||+||||++++++|+++|++|++++|+....   +.+              ....++.++.+|++|++++. .+
T Consensus        70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  148 (427)
T 4f6c_A           70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  148 (427)
T ss_dssp             EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CS
T ss_pred             CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-Cc
Confidence            3799999999999999999999999999999987511   000              00137899999999988888 77


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-----CCcccCCCCccccccc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~~~~~~~~~~~~  138 (229)
                      .++|+|||+|+.... ..++.+.+++|+.++.++++++.+  ..++||++||..+ |..     ...+.+|+.+..+..+
T Consensus       149 ~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~  224 (427)
T 4f6c_A          149 ENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  224 (427)
T ss_dssp             SCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCC
T ss_pred             CCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccccCCCC
Confidence            889999999997643 356788999999999999999998  3579999999988 431     1233444444332335


Q ss_pred             cCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      .+.|+.+|..+|.+++++.+.|++++++|||++|||...
T Consensus       225 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~  263 (427)
T 4f6c_A          225 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG  263 (427)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSS
T ss_pred             CCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCC
Confidence            678999999999999998888999999999999999764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-28  Score=196.93  Aligned_cols=196  Identities=18%  Similarity=0.145  Sum_probs=142.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc---CCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~vi~~a~~~~   77 (229)
                      +++|||||+|+||++++++|+++|++|++++|++++.+.+....++.++++|++|++++.++.   .++|+||||||...
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~   86 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH   86 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCC
Confidence            369999999999999999999999999999998654443321126888999999999887664   57899999999743


Q ss_pred             C------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      .      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.             ....|+.+|..
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~Y~~sK~a  153 (246)
T 2ag5_A           87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV-------------NRCVYSTTKAA  153 (246)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT-------------TBHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC-------------CCccHHHHHHH
Confidence            2      224577889999999999999987643   2469999999876543220             12459999996


Q ss_pred             HHHHH----HHHHhcCCCeEEEecCceecCCCCch-------hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          149 ADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT-------GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       149 ~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+.+.    .++.++|+++++++||+++||.....       ........ . ..+.+++..++|++.++.|+-
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dvA~~v~~l~  225 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL-K-RQKTGRFATAEEIAMLCVYLA  225 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH-H-TCTTSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHH-h-cCCCCCCCCHHHHHHHHHHHh
Confidence            65554    45556799999999999999853210       11111111 1 123456778888887777653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.8e-27  Score=199.71  Aligned_cols=172  Identities=24%  Similarity=0.206  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCC------CCCCeEEEEccCCChhhHHhhcCC--ccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP------SEGALELVYGDVTDYRSLVDACFG--CHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~--~d~   68 (229)
                      +||||||+||||++++++|+++|++|++++|+.+.     ++.+.      ...+++++++|++|.+++.+++++  +|+
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  105 (375)
T 1t2a_A           26 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE  105 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCE
Confidence            79999999999999999999999999999997653     11111      123688999999999999998875  699


Q ss_pred             EEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |||+|+....  +..++++.+++|+.++.++++++.+.+.  .++||++||.++|+.....+.+|+.+..+   .+.|+.
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~---~~~Y~~  182 (375)
T 1t2a_A          106 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYP---RSPYGA  182 (375)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC---CSHHHH
T ss_pred             EEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCC---CChhHH
Confidence            9999997432  1246778899999999999999998752  16999999999998765445555544332   467999


Q ss_pred             HHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +|..+|.+++.++. .+++++++||+.+|||+.
T Consensus       183 sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          183 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRR  215 (375)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence            99999999998875 489999999999999975

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.95  E-value=5.1e-27  Score=197.66  Aligned_cols=174  Identities=18%  Similarity=0.179  Sum_probs=137.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCCC-----CCCeEEEEccCCChhhHHhhcCC--ccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS-----EGALELVYGDVTDYRSLVDACFG--CHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--~d~   68 (229)
                      |+||||||+||||++++++|+++|++|++++|+.+.     ++.+..     ..+++++.+|++|.+++.+++++  +|+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            579999999999999999999999999999997643     122111     13688899999999999998875  799


Q ss_pred             EEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCC--ceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |||+|+....  +.+++.+.+++|+.++.++++++.+.+..  ++||++||.++|+.....+.+|+.+..+   .+.|+.
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~---~~~Y~~  158 (372)
T 1db3_A           82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYAV  158 (372)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC---CSHHHH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCC---CChHHH
Confidence            9999997432  34567788999999999999999987521  7999999999998765445555544332   467999


Q ss_pred             HHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       145 sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +|..+|.+++.++. ++++++++||+.+|||+..
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~  192 (372)
T 1db3_A          159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRG  192 (372)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCC
Confidence            99999999998864 4899999999999999753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=2.3e-28  Score=193.91  Aligned_cols=156  Identities=20%  Similarity=0.259  Sum_probs=129.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCe-EEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      |+||||||+|+||++++++|+++|++|++++|++++.+.+.. .++ +++++|++  +++.++++++|+|||+||...  
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~--   96 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP--   96 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT--
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC--
Confidence            789999999999999999999999999999998765443222 267 89999998  788888999999999999754  


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                      ..++++.+++|+.++.++++++.+.+ .++||++||..++.+.       ..+    .+...|+.+|..+|.+++   ..
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-------~~~----~~~~~Y~~sK~~~e~~~~---~~  161 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPD-------QGP----MNMRHYLVAKRLADDELK---RS  161 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGG-------GSC----GGGHHHHHHHHHHHHHHH---HS
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCC-------CCh----hhhhhHHHHHHHHHHHHH---HC
Confidence            25688999999999999999998875 6899999995544321       001    123569999999999876   57


Q ss_pred             CCCeEEEecCceecCCC
Q 027007          160 GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~  176 (229)
                      |++++++|||.++|+..
T Consensus       162 gi~~~~lrpg~v~~~~~  178 (236)
T 3e8x_A          162 SLDYTIVRPGPLSNEES  178 (236)
T ss_dssp             SSEEEEEEECSEECSCC
T ss_pred             CCCEEEEeCCcccCCCC
Confidence            99999999999999964

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=6.4e-28  Score=191.83  Aligned_cols=154  Identities=19%  Similarity=0.146  Sum_probs=129.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+|+||++++++|+++|+  +|++++|++++.+.... ..++++.+|++|++++.++++++|+||||||....
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~   97 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG   97 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCcccc
Confidence            5799999999999999999999999  99999998766543321 36788999999999999999999999999986321


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      . .++++.+++|+.++.++++++.+.+ .++||++||..+|++.                ...|+.+|...|.+++.   
T Consensus        98 ~-~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~----------------~~~Y~~sK~~~e~~~~~---  156 (242)
T 2bka_A           98 K-AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSS----------------NFLYLQVKGEVEAKVEE---  156 (242)
T ss_dssp             H-HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHHT---
T ss_pred             c-CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCCC----------------cchHHHHHHHHHHHHHh---
Confidence            1 2356789999999999999998874 6799999999887531                14599999999988765   


Q ss_pred             cCC-CeEEEecCceecCCC
Q 027007          159 EGL-PIVPVYPGVIYGPGK  176 (229)
Q Consensus       159 ~gi-~~~~irpg~i~g~~~  176 (229)
                      .++ +++++|||.+|||+.
T Consensus       157 ~~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          157 LKFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             TCCSEEEEEECCEEECTTG
T ss_pred             cCCCCeEEEcCceecCCCC
Confidence            367 599999999999975

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.95  E-value=1.3e-28  Score=197.94  Aligned_cols=194  Identities=14%  Similarity=0.116  Sum_probs=148.1

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|  +||++++++|+++|++|++.+|+++..+++.      ....+.++++|++|++++.++++       ++
T Consensus         8 ~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (256)
T 4fs3_A            8 TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNI   87 (256)
T ss_dssp             EEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            589999876  9999999999999999999999865433211      11367889999999998876654       58


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |++|||||....          +.++|+..+++|+.++..+.+.+.+.++. ++||++||..+..+.++.          
T Consensus        88 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~----------  157 (256)
T 4fs3_A           88 DGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY----------  157 (256)
T ss_dssp             SEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT----------
T ss_pred             CEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc----------
Confidence            999999986321          12345567899999999999998877533 599999998776544332          


Q ss_pred             ccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                          ..|+.||.    +++.++.+++++||+||+|.||.+.+|......   ..... + ....+++|++.|+|+++++.
T Consensus       158 ----~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~-~-~~~~Pl~R~g~peevA~~v~  231 (256)
T 4fs3_A          158 ----NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKE-I-KERAPLKRNVDQVEVGKTAA  231 (256)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHH-H-HHHSTTSSCCCHHHHHHHHH
T ss_pred             ----hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHH-H-HhcCCCCCCcCHHHHHHHHH
Confidence                34999998    777888888899999999999999998654322   22222 2 22345788999999999998


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      ||-
T Consensus       232 fL~  234 (256)
T 4fs3_A          232 YLL  234 (256)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=7.2e-29  Score=201.69  Aligned_cols=196  Identities=19%  Similarity=0.174  Sum_probs=144.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  108 (277)
T 4dqx_A           29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNN  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998654332111  1367889999999999877765       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+.   .++||++||..++.+.+.              ...|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  174 (277)
T 4dqx_A          109 AGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD--------------RTAYV  174 (277)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC--------------ChhHH
Confidence            997321      2345778899999999999999987642   359999999887754332              24599


Q ss_pred             HHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch-----hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT-----GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||...+    .++.+++++|+++++|+||.+.+|.....     .............+.++++.++|++.+..|+-
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHh
Confidence            9999555    55556667799999999999999851100     00000001223344577888999988877764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=4.1e-28  Score=198.47  Aligned_cols=207  Identities=15%  Similarity=0.125  Sum_probs=141.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....  ...++++++|++|.+++.++++   ++|+||||||..
T Consensus        18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~   97 (291)
T 3rd5_A           18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIM   97 (291)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCC
Confidence            68999999999999999999999999999998654332111  2368899999999999988876   579999999974


Q ss_pred             CC----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH-
Q 027007           77 EP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK-  151 (229)
Q Consensus        77 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~-  151 (229)
                      ..    +.+++++.+++|+.+++++++++.+.+ .++||++||..++.+..... +......+..+...|+.||++.+. 
T Consensus        98 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~sK~a~~~~  175 (291)
T 3rd5_A           98 AVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLE-DLNWRSRRYSPWLAYSQSKLANLLF  175 (291)
T ss_dssp             SCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSS-CTTCSSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcc-cccccccCCCCcchHHHHHHHHHHH
Confidence            32    456788999999999999999999986 46999999988775432110 000000111223569999995554 


Q ss_pred             ---HHHHHHhcC--CCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehh-hHhhhhhhHHHHH
Q 027007          152 ---IALQAASEG--LPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFL-LERMRHSCKFLTW  212 (229)
Q Consensus       152 ---~~~~~~~~g--i~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  212 (229)
                         +++++.++|  +++++++||.+.++............+..  ....+++. +++++.+..|+-.
T Consensus       176 ~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~A~~~~~l~~  240 (291)
T 3rd5_A          176 TSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS--AATRVVATDADFGARQTLYAAS  240 (291)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHH--HHHHHHhCCHHHHHHHHHHHHc
Confidence               445555666  99999999999998754322211111111  12334444 7777777666544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.95  E-value=2.2e-28  Score=196.70  Aligned_cols=195  Identities=16%  Similarity=0.141  Sum_probs=143.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    . ....+.++++|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   87 (257)
T 3imf_A            8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDIL   87 (257)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999986543221    1 12368899999999999877765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.              .
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (257)
T 3imf_A           88 INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG--------------V  153 (257)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT--------------C
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC--------------c
Confidence            999996321      334677889999999999999986643    2469999999877654332              2


Q ss_pred             CcHHHHHHH----HHHHHHHHH-hcCCCeEEEecCceecCCCCchhHH---HHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAV----ADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNL---VAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~-~~gi~~~~irpg~i~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||..    ++.++.+++ ++|+++++|+||.+.+|+.......   ..+.. ....+.++++.|+|++.++.|+-
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~p~~r~~~pedvA~~v~~L~  232 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRT-IQSVPLGRLGTPEEIAGLAYYLC  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHH-HTTSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHc
Confidence            459999994    455556665 5699999999999999864221100   01111 12234567888999988877764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=1.9e-28  Score=205.01  Aligned_cols=167  Identities=22%  Similarity=0.270  Sum_probs=135.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CC-eEEEEEcCCCCCCCCC---CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~-~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+||||||+|+||++++++|+++ |+ +|++++|++.+...+.   ...+++++.+|++|.+++.++++++|+|||+|+.
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~  101 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAAL  101 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCCC
Confidence            58999999999999999999999 97 9999999754322110   1137889999999999999999999999999986


Q ss_pred             cCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      ...  ...++.+.+++|+.++.++++++.+.+ .++||++||..++.+                 .+.|+.+|.++|.++
T Consensus       102 ~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~p-----------------~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A          102 KHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAANP-----------------INLYGATKLCSDKLF  163 (344)
T ss_dssp             CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSSC-----------------CSHHHHHHHHHHHHH
T ss_pred             CCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCCC-----------------ccHHHHHHHHHHHHH
Confidence            431  223567899999999999999999985 789999999765421                 245999999999999


Q ss_pred             HHHHh----cCCCeEEEecCceecCCCCchhHHHHH
Q 027007          154 LQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAK  185 (229)
Q Consensus       154 ~~~~~----~gi~~~~irpg~i~g~~~~~~~~~~~~  185 (229)
                      +.++.    .|++++++|||++|||.......+...
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~  199 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKL  199 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHH
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHH
Confidence            98764    589999999999999976433333333

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.95  E-value=2.9e-27  Score=213.33  Aligned_cols=175  Identities=22%  Similarity=0.330  Sum_probs=141.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhh-HHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++ |++|++++|+.++...+....+++++.+|++|.++ +.++++++|+|||+|+....
T Consensus       316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~  395 (660)
T 1z7e_A          316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP  395 (660)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCT
T ss_pred             ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCc
Confidence            47999999999999999999998 89999999987655443333578999999999876 77788899999999997442


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc----ccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~sK~~~e~~  152 (229)
                        +..++.+.+++|+.++.++++++.+.+  ++|||+||..+|+.....+.+|+.+.    +...+.+.|+.+|.++|.+
T Consensus       396 ~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~  473 (660)
T 1z7e_A          396 IEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  473 (660)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHH
Confidence              224567889999999999999999874  79999999999987655455555432    1112345799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ++.++. .|++++++||+++|||+..
T Consensus       474 ~~~~~~~~gi~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          474 IWAYGEKEGLQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             HHHHHHHHCCCEEEEEECSEESTTSS
T ss_pred             HHHHHHHcCCCEEEECCCcccCCCcc
Confidence            998864 5999999999999999853

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.95  E-value=3e-29  Score=203.23  Aligned_cols=195  Identities=17%  Similarity=0.159  Sum_probs=146.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+..+.+|++|.+++.++++       ++|+|
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (270)
T 3ftp_A           30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVL  109 (270)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999865432211     01357889999999999877765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ..
T Consensus       110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  175 (270)
T 3ftp_A          110 VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG--------------QV  175 (270)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------BH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC--------------ch
Confidence            999997422      234677889999999999999987653   2458999999877654432              24


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||.    +++.++++++++|+++++|+||.+.++............ .....+.++++.++|++.++.|+-
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~p~~r~~~pedvA~~v~~L~  249 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTA-LKTQIPLGRLGSPEDIAHAVAFLA  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHH-HHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHH-HHhcCCCCCCCCHHHHHHHHHHHh
Confidence            5999999    555666667778999999999999998532211111111 223334577889999988877764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=3.3e-28  Score=191.22  Aligned_cols=163  Identities=13%  Similarity=0.126  Sum_probs=126.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      ||||||||||+||++++++|+++|++|++++|++++...+.. .+++++++|++|+++  ++++++|+|||+|+....  
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG--   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT--
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCCC--
Confidence            999999999999999999999999999999998655433221 368899999999988  778899999999987511  


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc---ccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---IADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~---~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                         ....++|+.++.++++++.+.+  +++|++||..++......   ..++...+   .+.+.|+.+|..+|.+.....
T Consensus        76 ---~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~sK~~~e~~~~~~~  147 (224)
T 3h2s_A           76 ---SGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESA---ASQPWYDGALYQYYEYQFLQM  147 (224)
T ss_dssp             ---SSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGG---GGSTTHHHHHHHHHHHHHHTT
T ss_pred             ---cchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCC---ccchhhHHHHHHHHHHHHHHh
Confidence               1235789999999999998875  799999998665543221   22222222   124669999999996533333


Q ss_pred             hcCCCeEEEecCceecCCC
Q 027007          158 SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~~  176 (229)
                      ..+++++++||+.+|||+.
T Consensus       148 ~~~i~~~ivrp~~v~g~~~  166 (224)
T 3h2s_A          148 NANVNWIGISPSEAFPSGP  166 (224)
T ss_dssp             CTTSCEEEEEECSBCCCCC
T ss_pred             cCCCcEEEEcCccccCCCc
Confidence            5699999999999999954

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-28  Score=195.41  Aligned_cols=194  Identities=20%  Similarity=0.142  Sum_probs=141.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+....++.++++|++|++++.++++       ++|+||||||
T Consensus         7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag   86 (245)
T 1uls_A            7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG   86 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999986543322111136789999999999877665       4899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   +.++||++||.. +.+.+.              ...|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~--------------~~~Y~as  151 (245)
T 1uls_A           87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG--------------QANYAAS  151 (245)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT--------------CHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC--------------chhHHHH
Confidence            7432      224577889999999999999998764   246999999987 322211              2459999


Q ss_pred             HHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |..    ++.++.++.++|+++++|+||.+.++................ .+.++...++|++.++.|+-
T Consensus       152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~p~~~~~~~~dvA~~v~~l~  220 (245)
T 1uls_A          152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAA-TPLGRAGKPLEVAYAALFLL  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhh-CCCCCCcCHHHHHHHHHHHh
Confidence            994    555566666779999999999999987532221111111111 23456778888888776653

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=3.3e-28  Score=194.20  Aligned_cols=191  Identities=19%  Similarity=0.183  Sum_probs=142.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~~   75 (229)
                      ++|||||+|+||++++++|++ .|++|++.+|+.+...     ..+.++++|++|.+++.++++     ++|+||||||.
T Consensus         6 ~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~   80 (244)
T 4e4y_A            6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI   80 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             eEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            589999999999999999999 7899999998764211     257889999999999988775     68999999997


Q ss_pred             cCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHH
Q 027007           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (229)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  148 (229)
                      ...      +.++|++.+++|+.++.++++++.+.+.. ++||++||..++.+.+.              ...|+.||..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~Y~asKaa  146 (244)
T 4e4y_A           81 LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN--------------SFAYTLSKGA  146 (244)
T ss_dssp             CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT--------------BHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC--------------CchhHHHHHH
Confidence            421      23457788999999999999999887532 48999999887754332              2359999995


Q ss_pred             HHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHH----------HHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          149 ADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLV----------AKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       149 ~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+.    +++++.++|+++++|+||.+.+|.........          .........+.+++..|+|++.++.|+-
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  223 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh
Confidence            554    45556677999999999999998632111100          1111122334567788999888877764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.95  E-value=2.1e-28  Score=197.64  Aligned_cols=197  Identities=15%  Similarity=0.074  Sum_probs=145.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..       .....+.++++|++|.+++.++++       ++|
T Consensus        10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   89 (265)
T 3lf2_A           10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCAS   89 (265)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCS
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999999986543221       111248899999999998877664       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.++|++.+++|+.+++++++++.+.+.   .++||++||..++.+.+.              
T Consensus        90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  155 (265)
T 3lf2_A           90 ILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH--------------  155 (265)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC--------------
Confidence            99999997322      2345778899999999999999987642   358999999877654332              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-----------hHHHHHHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-----------GNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ...|+.||.    +++.++.+++++|+++++|+||.+.+|.....           ..+..........++++++.|+|+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  235 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEA  235 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHH
Confidence            245999999    44555666777899999999999999752110           111111111112456788899999


Q ss_pred             hhhhHHHHH
Q 027007          204 RHSCKFLTW  212 (229)
Q Consensus       204 ~~~~~~l~~  212 (229)
                      +.++.||-.
T Consensus       236 A~~v~fL~s  244 (265)
T 3lf2_A          236 ARAILFLAS  244 (265)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhC
Confidence            988887653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-27  Score=195.27  Aligned_cols=151  Identities=21%  Similarity=0.201  Sum_probs=128.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      |+|||||||||||++++++|+++|++|++++|+                .+|++|.+++.++++  ++|+|||+|+....
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   76 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAV   76 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccCCH
Confidence            589999999999999999999999999999986                369999999999988  79999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..++.+.+++|+.++.++++++.+.+ . +|||+||.++|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~  151 (292)
T 1vl0_A           77 DKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNP---QSAYGKTKLEGENFVKAL  151 (292)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHHhh
Confidence              224677899999999999999999875 4 999999999998765445555554332   467999999999999886


Q ss_pred             HhcCCCeEEEecCceecCC
Q 027007          157 ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~  175 (229)
                      +   .+++++||+.+|||.
T Consensus       152 ~---~~~~~lR~~~v~G~~  167 (292)
T 1vl0_A          152 N---PKYYIVRTAWLYGDG  167 (292)
T ss_dssp             C---SSEEEEEECSEESSS
T ss_pred             C---CCeEEEeeeeeeCCC
Confidence            4   369999999999993

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=2.3e-28  Score=195.50  Aligned_cols=195  Identities=16%  Similarity=0.167  Sum_probs=138.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      +||||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++.+|+++.+++.++++   ++|+||||||..
T Consensus        16 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~   95 (249)
T 3f9i_A           16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGIT   95 (249)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC--
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            79999999999999999999999999999998654332211  1367889999999999988776   689999999973


Q ss_pred             C------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           77 E------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        77 ~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      .      .+.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...|+.||+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK~  161 (249)
T 3f9i_A           96 SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG--------------QANYCASKA  161 (249)
T ss_dssp             -----------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC--------------SHHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC--------------CchhHHHHH
Confidence            2      2446788999999999999999987653   2459999999987765432              245999999


Q ss_pred             HHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          148 VAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       148 ~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..+    .++.++.++|+++++++||.+.++............. ....+.+++..++|++.++.|+-
T Consensus       162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~  228 (249)
T 3f9i_A          162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAI-VQKIPLGTYGIPEDVAYAVAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHH-HHHCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHc
Confidence            555    4555566679999999999999987543222222111 12223467778888887776653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.95  E-value=8.9e-28  Score=200.24  Aligned_cols=172  Identities=22%  Similarity=0.271  Sum_probs=140.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-CCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++|       ++|++++|+.++.... ...+++++.+|++|++++.+++ .++|+|||+
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   93 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-FSGAVDARAADLSAPGEAEKLVEARPDVIFHL   93 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-CCSEEEEEECCTTSTTHHHHHHHTCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-cCCceeEEEcCCCCHHHHHHHHhcCCCEEEEC
Confidence            689999999999999999999999       8999999986543321 1236888999999999999988 489999999


Q ss_pred             CcccCC-CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           73 AALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        73 a~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      |+.... +..++++.+++|+.++.++++++.+.+    ..++||++||..+|+.....+.+|+.+..   +.+.|+.+|.
T Consensus        94 A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~  170 (342)
T 2hrz_A           94 AAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT---PLTSYGTQKA  170 (342)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCC---CSSHHHHHHH
T ss_pred             CccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCC---CcchHHHHHH
Confidence            986431 224677889999999999999998764    25799999999999875334455554433   2467999999


Q ss_pred             HHHHHHHHHHhc-CCCeEEEecCceec-CCC
Q 027007          148 VADKIALQAASE-GLPIVPVYPGVIYG-PGK  176 (229)
Q Consensus       148 ~~e~~~~~~~~~-gi~~~~irpg~i~g-~~~  176 (229)
                      .+|.++++++.. +++.+++|++.+|| |+.
T Consensus       171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~  201 (342)
T 2hrz_A          171 ICELLLSDYSRRGFFDGIGIRLPTICIRPGK  201 (342)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEEECEETTCCSS
T ss_pred             HHHHHHHHHHHhcCCCceeEEeeeEEecCCC
Confidence            999999998765 78999999999998 764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=2e-27  Score=190.37  Aligned_cols=191  Identities=21%  Similarity=0.174  Sum_probs=130.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+. +.    ..+..+.+|++|.+++.++++       ++|+||||||
T Consensus         9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag   83 (250)
T 2fwm_X            9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-EQ----YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG   83 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-SC----CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-hc----CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            68999999999999999999999999999998652 11    137888999999999887765       6899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...|+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~s  149 (250)
T 2fwm_X           84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG--------------MSAYGAS  149 (250)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC--------------CchHHHH
Confidence            7422      224577899999999999999996543   2469999999877644321              2459999


Q ss_pred             HHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhc------ccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWK------KVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |...+.+.+    ++.++|+++++++||.+++|......   ......+..      ...+.+++..|+|++.++.|+-
T Consensus       150 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  228 (250)
T 2fwm_X          150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence            996665554    45567999999999999998642210   000101111      0223456778888887776653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=2e-28  Score=198.60  Aligned_cols=194  Identities=18%  Similarity=0.150  Sum_probs=140.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhc--------CCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~--------~~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...     ....+.++++|++|++++.+++        .++|+
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~  102 (273)
T 1ae1_A           23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI  102 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcE
Confidence            6899999999999999999999999999999865332210     1236788999999999987776        57999


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              .
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  168 (273)
T 1ae1_A          103 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------------V  168 (273)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC--------------c
Confidence            9999997421      223577889999999999999997643   2469999999987754322              2


Q ss_pred             CcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch-------hHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          140 TQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT-------GNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      ..|+.+|...+.+    +.+++++|+++++|+||.+++|.....       ........ . ..+.++++.|+|++.++.
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~-~~p~~r~~~p~dvA~~v~  246 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-V-KTPMGRAGKPQEVSALIA  246 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-H-HSTTCSCBCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHH-h-cCCCCCCcCHHHHHHHHH
Confidence            4599999955554    455566799999999999999964221       11111111 1 123467788999988877


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       247 ~l~  249 (273)
T 1ae1_A          247 FLC  249 (273)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.95  E-value=3.4e-29  Score=202.44  Aligned_cols=194  Identities=18%  Similarity=0.144  Sum_probs=145.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...      ....++++++|++|.+++.++++       ++|+
T Consensus        22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  101 (266)
T 4egf_A           22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDV  101 (266)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999865432211      12368899999999999877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.++|++.+++|+.++.++++++.+.+.    .++||++||..++.+.+.              
T Consensus       102 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  167 (266)
T 4egf_A          102 LVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------------  167 (266)
T ss_dssp             EEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC--------------
Confidence            9999997432      2345778899999999999999977641    359999999987754332              


Q ss_pred             cCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.||..    ++.++++++++|+++++|+||.+.+|.....   ......  .....+.++++.++|++.++.||-
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p~~r~~~p~dva~~v~~L~  245 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAP--MIARIPLGRFAVPHEVSDAVVWLA  245 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHH--HHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHH--HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            2459999994    4555566667799999999999999853211   111111  122234577888999998887764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.95  E-value=3.2e-28  Score=197.10  Aligned_cols=191  Identities=19%  Similarity=0.164  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      +||||||+|+||++++++|+++|++|++++|+.+....     .+..+++|++|.+++.++++       ++|+||||||
T Consensus        16 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg   90 (269)
T 3vtz_A           16 VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAG   90 (269)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            69999999999999999999999999999998754422     46788999999999877765       6899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+..              ..|+.|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y~as  156 (269)
T 3vtz_A           91 IEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA--------------AAYVTS  156 (269)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC--------------HHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC--------------hhHHHH
Confidence            7432      223567789999999999999987753   24699999999887654322              459999


Q ss_pred             HHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchhH----------HHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGN----------LVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+..+.+.+.+    ++ ++++++|+||.+++|.......          ......+....+.++++.++|++.++.||-
T Consensus       157 Kaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          157 KHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99666665554    44 8999999999999985311100          000011122334567888999988877664


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       236 s  236 (269)
T 3vtz_A          236 S  236 (269)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.95  E-value=9.9e-28  Score=197.08  Aligned_cols=169  Identities=20%  Similarity=0.222  Sum_probs=137.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC-----ccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-----CHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~d~vi~~a~~   75 (229)
                      +||||||+||||++++++|+++| ++|++++|+...... .....+. +.+|++|.+.+.+++++     +|+|||+|+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-hhcCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            58999999999999999999999 999999997643210 0001222 67899999999988874     9999999998


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                      ...+..++++.+++|+.++.++++++.+.+ . +||++||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~---p~~~Y~~sK~~~e~~~~~  153 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEK---PLNVYGYSKFLFDEYVRQ  153 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCC---CSSHHHHHHHHHHHHHHH
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCC---CCChhHHHHHHHHHHHHH
Confidence            655556788899999999999999999885 5 99999999999876554555554332   246799999999999999


Q ss_pred             HHh-cCCCeEEEecCceecCCCC
Q 027007          156 AAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       156 ~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.. +|++++++||+++|||+..
T Consensus       154 ~~~~~g~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          154 ILPEANSQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCG
T ss_pred             HHHHcCCCEEEEeCCcEECcCCC
Confidence            864 4899999999999999853

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=1.8e-28  Score=196.69  Aligned_cols=195  Identities=11%  Similarity=0.024  Sum_probs=133.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..     ...+.++++|++|.+++.++++      ++|+||
T Consensus         9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv   88 (252)
T 3h7a_A            9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTI   88 (252)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEE
Confidence            58999999999999999999999999999998765443211     2368899999999999988775      689999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              ...
T Consensus        89 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  154 (252)
T 3h7a_A           89 FNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG--------------FAA  154 (252)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT--------------CHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC--------------Ccc
Confidence            99997422      234577889999999999999987653   2369999999877654332              245


Q ss_pred             HHHHHHH----HHHHHHHHHhcCCCe-EEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          142 YERSKAV----ADKIALQAASEGLPI-VPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       142 Y~~sK~~----~e~~~~~~~~~gi~~-~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |+.||+.    ++.++.++.++|+++ ++++||.+.++............ .....+.+ +..|+|++.++.|+-.
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~-~~~pedvA~~~~~l~s  228 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGK-DALANPDL-LMPPAAVAGAYWQLYQ  228 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhh-hhhcCCcc-CCCHHHHHHHHHHHHh
Confidence            9999984    455556666779999 99999999998753321111111 11112233 7788888888777643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2.3e-28  Score=198.61  Aligned_cols=194  Identities=16%  Similarity=0.172  Sum_probs=139.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------C-CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------P-SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+       . ....+.++++|++|++++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (278)
T 1spx_A            8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   87 (278)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999986432211       1 11357889999999999988776       79


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEcccee-eecCCCcccCCCCcc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFA-LGSTDGYIADENQVH  133 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~-~~~~~~~~~~~~~~~  133 (229)
                      |+||||||....          +.++|++.+++|+.++.++++++.+.+.  .++||++||..+ +.+.+.         
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  158 (278)
T 1spx_A           88 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD---------  158 (278)
T ss_dssp             CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---------
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCC---------
Confidence            999999997421          2345677899999999999999987631  269999999876 543221         


Q ss_pred             ccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch----hHH------HHHHhhcccceeeeehh
Q 027007          134 EEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT----GNL------VAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~----~~~------~~~~~~~~~~~~~~~~~  199 (229)
                           ...|+.||...+.+.    .++.++|+++++|+||.+++|.....    ...      ... ... ..+.+++..
T Consensus       159 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~-~~p~~~~~~  231 (278)
T 1spx_A          159 -----FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT-MKE-CVPAGVMGQ  231 (278)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH-HHH-HCTTSSCBC
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH-HHh-cCCCcCCCC
Confidence                 235999999666555    44556799999999999999964221    011      111 111 123456778


Q ss_pred             hHhhhhhhHHHH
Q 027007          200 LERMRHSCKFLT  211 (229)
Q Consensus       200 ~~~~~~~~~~l~  211 (229)
                      ++|++.+..|+-
T Consensus       232 ~~dvA~~v~~l~  243 (278)
T 1spx_A          232 PQDIAEVIAFLA  243 (278)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence            888888777653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=2.8e-27  Score=192.92  Aligned_cols=206  Identities=16%  Similarity=0.062  Sum_probs=146.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-----------------CCCCCeEEEEccCCChhhHHhhcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----------------PSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.......                 .....+.++++|++|.+++.++++
T Consensus        12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   91 (287)
T 3pxx_A           12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA   91 (287)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            689999999999999999999999999999873321110                 012368899999999999877765


Q ss_pred             -------CccEEEEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCc
Q 027007           65 -------GCHVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                             ++|+||||||....    +.++|++.+++|+.+++++++++.+.+. .++||++||..++.+....+..+..+
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  171 (287)
T 3pxx_A           92 NAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQ  171 (287)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----C
T ss_pred             HHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccC
Confidence                   68999999997432    3356788999999999999999998863 34999999988775432222222211


Q ss_pred             cccccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHH---------------HHHhhcccce
Q 027007          133 HEEKYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV---------------AKLQWKKVDL  193 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~---------------~~~~~~~~~~  193 (229)
                      .   +....|+.||...+    .++++++++|+++++|+||.+.+|.........               .........+
T Consensus       172 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (287)
T 3pxx_A          172 G---PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP  248 (287)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSS
T ss_pred             C---CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccC
Confidence            1   12356999999555    455556667999999999999999754321110               0000111111


Q ss_pred             eeeehhhHhhhhhhHHHH
Q 027007          194 VKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       194 ~~~~~~~~~~~~~~~~l~  211 (229)
                       ++++.++|++.++.||-
T Consensus       249 -~~~~~p~dva~~v~fL~  265 (287)
T 3pxx_A          249 -TPYVEASDISNAVCFLA  265 (287)
T ss_dssp             -CSCBCHHHHHHHHHHHH
T ss_pred             -CCCCCHHHHHhhHheec
Confidence             67788899988887764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.95  E-value=1.2e-28  Score=197.08  Aligned_cols=193  Identities=18%  Similarity=0.243  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   88 (247)
T 2jah_A            9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDIL   88 (247)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999864432211     12367889999999999877764       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||||....      +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.              ...
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  154 (247)
T 2jah_A           89 VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRN--------------AAV  154 (247)
T ss_dssp             EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTT--------------CHH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCC--------------CcH
Confidence            999997421      2235677899999999999999987541  169999999877654322              245


Q ss_pred             HHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeee--hhhHhhhhhhHHHH
Q 027007          142 YERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDI--FLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~  211 (229)
                      |+.+|.    +++.++.++.++|+++++|+||.+.++...... ......... . + .++  ..++|++.++.|+-
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~-~-~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ-R-I-SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH-H-T-TTSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh-c-c-cccCCCCHHHHHHHHHHHh
Confidence            999998    455556666778999999999999998642211 111111111 1 1 233  77888888777654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.95  E-value=9.6e-29  Score=200.14  Aligned_cols=193  Identities=20%  Similarity=0.188  Sum_probs=145.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.. ..+.+     .....+.++++|++|.+++.++++       ++|+
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999998432 21111     012367889999999999887765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              .
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  175 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG--------------Q  175 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC--------------c
Confidence            9999997432      334677899999999999999987653   2469999999877654332              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ..|+.||.    +++.++.+++++|+++++|+||.+.+|......   .... ....+.++++.++|++.++.|+-.
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~-~~~~p~~r~~~~~dvA~~v~~l~s  248 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA---AEKL-LEVIPLGRYGEAAEVAGVVRFLAA  248 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH---HHHH-GGGCTTSSCBCHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc---HHHH-HhcCCCCCCCCHHHHHHHHHHHhC
Confidence            45999999    555666677778999999999999999753321   1222 223345778889999888777643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.95  E-value=3e-29  Score=203.34  Aligned_cols=194  Identities=18%  Similarity=0.118  Sum_probs=145.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...     ....+.++++|++|.+++.++++       ++|+|
T Consensus        28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (271)
T 4ibo_A           28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDIL  107 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            6899999999999999999999999999999765432211     12368889999999999887765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              ..
T Consensus       108 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------~~  173 (271)
T 4ibo_A          108 VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT--------------VA  173 (271)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT--------------CH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC--------------ch
Confidence            999997422      334677889999999999999987764   2359999999876644322              24


Q ss_pred             cHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||...    +.++.+++++|+++++|+||.+.++......   .+...  .....+.++++.++|++.++.|+-
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p~~r~~~pedva~~v~~L~  249 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAW--VKARTPAKRWGKPQELVGTAVFLS  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHH--HHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHH--HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            599999844    4555666678999999999999998642211   11111  122234578889999998887764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=2e-28  Score=197.33  Aligned_cols=196  Identities=21%  Similarity=0.177  Sum_probs=141.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~   93 (265)
T 2o23_A           14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC   93 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            69999999999999999999999999999998765332111  1368899999999999988776       79999999


Q ss_pred             CcccCC------------CCCCchhhhHhhHHHHHHHHHHHHhcC---------CCceEEEEccceeeecCCCcccCCCC
Q 027007           73 AALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        73 a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                      ||....            +.+++++.+++|+.++.++++++.+.+         ..++||++||..++.+.+.       
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  166 (265)
T 2o23_A           94 AGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG-------  166 (265)
T ss_dssp             CCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT-------
T ss_pred             CccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC-------
Confidence            997422            223467789999999999999998763         2468999999887654322       


Q ss_pred             ccccccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          132 VHEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                             ...|+.+|...+.+    +.++.++|+++++++||.+.++....................+++..+++++.++
T Consensus       167 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  239 (265)
T 2o23_A          167 -------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLV  239 (265)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHH
Confidence                   24599999955544    4555567999999999999998643211111111112222115677888888877


Q ss_pred             HHHH
Q 027007          208 KFLT  211 (229)
Q Consensus       208 ~~l~  211 (229)
                      .|+-
T Consensus       240 ~~l~  243 (265)
T 2o23_A          240 QAII  243 (265)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7663

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=6e-29  Score=201.67  Aligned_cols=195  Identities=18%  Similarity=0.130  Sum_probs=135.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn  109 (272)
T 4dyv_A           30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNN  109 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999999999999999998654332111  1367889999999999888765       79999999


Q ss_pred             CcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||....       +.++|++.+++|+.++.++++++.+.+.     .++||++||..++.+.+.              ..
T Consensus       110 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~--------------~~  175 (272)
T 4dyv_A          110 AGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY--------------SA  175 (272)
T ss_dssp             CCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT--------------CH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC--------------ch
Confidence            997422       2345778899999999999999877642     359999999877654332              24


Q ss_pred             cHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      .|+.||...+.    ++.+++++|+++++|+||.+.+|............  ....+..++..++|++.++.|+-.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s  249 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQA--DLSIKVEPVMDVAHVASAVVYMAS  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhh--hhcccccCCCCHHHHHHHHHHHhC
Confidence            59999995554    45556667999999999999998743321111111  112234567788888888777654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.6e-28  Score=199.90  Aligned_cols=195  Identities=18%  Similarity=0.227  Sum_probs=145.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    . ....+.++++|++|.+++.++++       ++|+|
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (280)
T 3tox_A           10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTA   89 (280)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986532221    1 12468889999999999877765       68999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....       +.++|++.+++|+.+++++++++.+.+   ..++||++||..++ .+.+.              
T Consensus        90 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  155 (280)
T 3tox_A           90 FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG--------------  155 (280)
T ss_dssp             EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT--------------
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC--------------
Confidence            999996421       234577899999999999999987753   23599999998776 22221              


Q ss_pred             cCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCc-h---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLT-T---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.||+..    +.++.+++++|+++++|+||.+.+|.... .   ....... .....+.++++.|+|++.++.|+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~pedvA~~v~~L  234 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF-VEGLHALKRIARPEEIAEAALYL  234 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH-HHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHH-HhccCccCCCcCHHHHHHHHHHH
Confidence            24599999854    55556666779999999999999997432 1   1111111 22334456788899998888776


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       235 ~  235 (280)
T 3tox_A          235 A  235 (280)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=9.6e-29  Score=199.07  Aligned_cols=194  Identities=16%  Similarity=0.141  Sum_probs=140.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEccCCChhhHHhhcC------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+..       ...+.++++|++|++++.++++      ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid~   88 (260)
T 2z1n_A            9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADI   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCCE
Confidence            68999999999999999999999999999998643322100       1267889999999999988775      4899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              .
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (260)
T 2z1n_A           89 LVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD--------------L  154 (260)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------------C
Confidence            9999996322      234677889999999999999887653   2469999999887754322              2


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCc----------hhHHH-HHHhhcccceeeeehhhHhhh
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLT----------TGNLV-AKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~  204 (229)
                      ..|+.+|...+    .++.++.++|+++++|+||++++|....          ..... ...+ ....+.++++.++|++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~~~dva  233 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM-ASRIPMGRVGKPEELA  233 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCTTSSCCCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH-HhcCCCCCccCHHHHH
Confidence            45999998555    4455566679999999999999997531          11000 1111 1112345667888888


Q ss_pred             hhhHHH
Q 027007          205 HSCKFL  210 (229)
Q Consensus       205 ~~~~~l  210 (229)
                      .++.|+
T Consensus       234 ~~v~~l  239 (260)
T 2z1n_A          234 SVVAFL  239 (260)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777665

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=1.5e-27  Score=191.52  Aligned_cols=187  Identities=20%  Similarity=0.191  Sum_probs=137.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+      .+.++++|++|++++.++++       ++|+||||||
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg   96 (253)
T 2nm0_A           23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG   96 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            6999999999999999999999999999999865543      36789999999999877664       4799999999


Q ss_pred             ccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ...      .+.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  162 (253)
T 2nm0_A           97 VTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG--------------QANYAAS  162 (253)
T ss_dssp             CCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH--------------HHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC--------------cHHHHHH
Confidence            742      2446788999999999999999987753   3469999999876543211              2459999


Q ss_pred             HHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |...+.+.    +++.++|+++++++||.+.++...... ..... .. ...+.+++..+++++.++.|+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~-~~~p~~~~~~p~dvA~~i~~l  230 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRAN-IV-SQVPLGRYARPEEIAATVRFL  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHH-HH-TTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHH-HH-hcCCCCCCcCHHHHHHHHHHH
Confidence            99555554    455567999999999999998642211 11111 11 122345677888888776665

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=3.8e-28  Score=197.09  Aligned_cols=193  Identities=17%  Similarity=0.186  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCCCC------CCCeEEEEccCCCh----hhHHhhcC------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPS------EGALELVYGDVTDY----RSLVDACF------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~------~~~~~~~~~D~~~~----~~~~~~~~------   64 (229)
                      ++|||||+|+||++++++|+++|++|++++| +.++.+.+..      ...+.++++|++|.    +++.++++      
T Consensus        13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   92 (276)
T 1mxh_A           13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   92 (276)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc
Confidence            6899999999999999999999999999999 6443221100      13678899999999    88877665      


Q ss_pred             -CccEEEEeCcccCC------CC-----------CCchhhhHhhHHHHHHHHHHHHhcCC--C------ceEEEEcccee
Q 027007           65 -GCHVIFHTAALVEP------WL-----------PDPSRFFAVNVEGLKNVVQAAKETKT--V------EKIIYTSSFFA  118 (229)
Q Consensus        65 -~~d~vi~~a~~~~~------~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~--~------~~iv~~sS~~~  118 (229)
                       ++|+||||||....      +.           ++|++.+++|+.++.++++++.+.+.  .      ++||++||..+
T Consensus        93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  172 (276)
T 1mxh_A           93 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  172 (276)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhh
Confidence             68999999996321      12           44667899999999999999998652  2      69999999887


Q ss_pred             eecCCCcccCCCCccccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhccccee
Q 027007          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLV  194 (229)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~  194 (229)
                      +.+.+.              ...|+.||...+.+.    .++.++|+++++|+||.+++| ........... ... .+.
T Consensus       173 ~~~~~~--------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~-~~~-~p~  235 (276)
T 1mxh_A          173 DLPLPG--------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEY-RRK-VPL  235 (276)
T ss_dssp             GSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHH-HTT-CTT
T ss_pred             cCCCCC--------------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHH-Hhc-CCC
Confidence            754322              245999999655554    555567999999999999999 32222222222 222 233


Q ss_pred             ee-ehhhHhhhhhhHHHH
Q 027007          195 KD-IFLLERMRHSCKFLT  211 (229)
Q Consensus       195 ~~-~~~~~~~~~~~~~l~  211 (229)
                      ++ +..++|++.++.|+-
T Consensus       236 ~r~~~~~~dva~~v~~l~  253 (276)
T 1mxh_A          236 GQSEASAAQIADAIAFLV  253 (276)
T ss_dssp             TSCCBCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHh
Confidence            45 778888887776653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=2.3e-28  Score=195.24  Aligned_cols=195  Identities=17%  Similarity=0.156  Sum_probs=147.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus         7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (247)
T 3lyl_A            7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDIL   86 (247)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999865432211     12368899999999999877764       47999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ..
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  152 (247)
T 3lyl_A           87 VNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG--------------QT  152 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------CH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--------------cH
Confidence            999997432      334577889999999999999987753   2359999999877654332              24


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||.    +++.+++++.++|+++++++||.+.++............ .....+.+++..++|++.++.|+-
T Consensus       153 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          153 NYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSF-IATKIPSGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHH-HHTTSTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHH-HhhcCCCCCCcCHHHHHHHHHHHh
Confidence            5999999    555566666677999999999999999764433322222 223334567888999888776653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=8.6e-29  Score=199.65  Aligned_cols=194  Identities=22%  Similarity=0.112  Sum_probs=141.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~   93 (263)
T 3ak4_A           14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCAN   93 (263)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999997643221100  0156789999999999988776       79999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+   . .++||++||..++.+.+.              ...|
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  159 (263)
T 3ak4_A           94 AGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL--------------LAHY  159 (263)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC--------------chhH
Confidence            997422      223577889999999999999987753   2 469999999876543221              2459


Q ss_pred             HHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchh-----------HHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          143 ERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTG-----------NLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       143 ~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                      +.+|...+.+    +.++.++|+++++|+||.+++|......           ......+ ....+.+++..++|++.+.
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~dvA~~v  238 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEY-VSLTPLGRIEEPEDVADVV  238 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHH-HHTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHH-HhcCCCCCCcCHHHHHHHH
Confidence            9999955554    4555567999999999999998632110           0001111 1122346678888888877


Q ss_pred             HHH
Q 027007          208 KFL  210 (229)
Q Consensus       208 ~~l  210 (229)
                      .|+
T Consensus       239 ~~l  241 (263)
T 3ak4_A          239 VFL  241 (263)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            665

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.2e-28  Score=200.70  Aligned_cols=196  Identities=18%  Similarity=0.189  Sum_probs=139.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----C--CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----L--PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~--~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+. +..+.    +  .....+.++++|++|.+++.++++       ++|
T Consensus        27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            689999999999999999999999999999843 22111    1  012468899999999999877765       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  172 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF--------------  172 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--------------
Confidence            99999997422      334577889999999999999986653   2468999999877654332              


Q ss_pred             cCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHH--------H---HHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV--------A---KLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~  203 (229)
                      ...|+.||...    +.++.+++++|+++++|+||.+++|.........        .   ........+.++++.++|+
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edv  252 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV  252 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHH
Confidence            24599999954    4555566677999999999999998643211100        0   0012223345778889999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.|+-
T Consensus       253 A~~v~~L~  260 (281)
T 3v2h_A          253 ASLALYLA  260 (281)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            88877754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.95  E-value=7.6e-28  Score=188.56  Aligned_cols=161  Identities=18%  Similarity=0.265  Sum_probs=120.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      ||||||||+|+||++++++|+++|++|++++|++++.+.+.  .+++++++|++|.++  ++++++|+|||+|+....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            99999999999999999999999999999999876544333  378899999999988  778899999999987321  


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC-cccCCCCccccccccCcHHHHHHHHHHHHHHHH-h
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAA-S  158 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~  158 (229)
                           ..+.|+.++.++++++.+.+ .+++|++||..++...+. .+..+..+.   .+.+.|+.+|...|.+..... .
T Consensus        75 -----~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~---~~~~~y~~~k~~~e~~~~~~~~~  145 (221)
T 3ew7_A           75 -----EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGL---REAPYYPTARAQAKQLEHLKSHQ  145 (221)
T ss_dssp             -----TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC----------------------CCCSCCHHHHHHHHHHHHTTT
T ss_pred             -----ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCC---CCHHHHHHHHHHHHHHHHHHhhc
Confidence                 25679999999999998874 679999999877654332 122222221   123569999999988743333 5


Q ss_pred             cCCCeEEEecCceecCCC
Q 027007          159 EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~~  176 (229)
                      .|++++++||+.+|||+.
T Consensus       146 ~gi~~~ivrp~~v~g~~~  163 (221)
T 3ew7_A          146 AEFSWTYISPSAMFEPGE  163 (221)
T ss_dssp             TTSCEEEEECSSCCCCC-
T ss_pred             cCccEEEEeCcceecCCC
Confidence            699999999999999953

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.95  E-value=8.5e-29  Score=201.46  Aligned_cols=195  Identities=16%  Similarity=0.145  Sum_probs=144.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..     .....+.++++|++|.+++.++++       ++|+|
T Consensus        26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  105 (279)
T 3sju_A           26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGIL  105 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            689999999999999999999999999999986543221     112468899999999999877765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc--C---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--K---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.  +   ..++||++||..++.+.+.              
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------  171 (279)
T 3sju_A          106 VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY--------------  171 (279)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--------------
Confidence            999997432      23457788999999999999998772  2   2469999999887654332              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-----------hHHHHHHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-----------GNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ...|+.||.    +++.++.+++++|+++++|+||.+.+|.....           ...... ......+.++++.++|+
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~~pedv  250 (279)
T 3sju_A          172 AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHE-RFNAKIPLGRYSTPEEV  250 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHH-HHHTTCTTSSCBCHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHH-HHHhcCCCCCCCCHHHH
Confidence            245999999    44555556667799999999999999853210           111111 12233345778889999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.||-
T Consensus       251 A~~v~~L~  258 (279)
T 3sju_A          251 AGLVGYLV  258 (279)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            88877663

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.95  E-value=4.8e-27  Score=198.67  Aligned_cols=172  Identities=23%  Similarity=0.197  Sum_probs=138.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCCC-----CC-CeEEEEccCCChhhHHhhcCC--ccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS-----EG-ALELVYGDVTDYRSLVDACFG--CHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~-----~~-~~~~~~~D~~~~~~~~~~~~~--~d~   68 (229)
                      +||||||+||||++++++|+++|++|++++|+.++     ++.+..     .. +++++.+|++|.+++.+++++  +|+
T Consensus        30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  109 (381)
T 1n7h_A           30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDE  109 (381)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            79999999999999999999999999999998654     222211     12 688999999999999998875  699


Q ss_pred             EEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||+|+....  +..++...+++|+.++.++++++.+.+.    ..+||++||.++|+.... +.+|+.+..+   .+.|
T Consensus       110 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~---~~~Y  185 (381)
T 1n7h_A          110 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP---RSPY  185 (381)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC---CSHH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCC---CCch
Confidence            9999997432  1245778899999999999999988641    139999999999987655 4555543332   4679


Q ss_pred             HHHHHHHHHHHHHHHhc-CCCeEEEecCceecCCCC
Q 027007          143 ERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~~-gi~~~~irpg~i~g~~~~  177 (229)
                      +.+|..+|.+++.++.. +++++++|++.+|||+..
T Consensus       186 ~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~  221 (381)
T 1n7h_A          186 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  221 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCC
Confidence            99999999999988754 899999999999999753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=6.6e-28  Score=192.73  Aligned_cols=193  Identities=22%  Similarity=0.197  Sum_probs=141.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-----C-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+     . ....+.++++|++|++++.++++       ++|+
T Consensus         4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (250)
T 2cfc_A            4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV   83 (250)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999976432211     1 11368899999999999988775       7899


Q ss_pred             EEEeCcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ||||||....         +.+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.            
T Consensus        84 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  151 (250)
T 2cfc_A           84 LVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG------------  151 (250)
T ss_dssp             EEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------------
T ss_pred             EEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC------------
Confidence            9999997432         123467789999999999998887642   3469999999877654322            


Q ss_pred             cccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCc-h--hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLT-T--GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                        ...|+.+|...+.+++.+    .++|+++++++||.++||.... .  ..+... +.. ..+.+++..+++++.+..|
T Consensus       152 --~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~dva~~~~~  227 (250)
T 2cfc_A          152 --RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQ-VLA-RIPQKEIGTAAQVADAVMF  227 (250)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHH-HHT-TCTTCSCBCHHHHHHHHHH
T ss_pred             --chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHH-HHh-cCCCCCCcCHHHHHHHHHH
Confidence              245999999777666554    4559999999999999997532 1  112121 111 2234567788888776655


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       228 l  228 (250)
T 2cfc_A          228 L  228 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.95  E-value=1.8e-26  Score=192.56  Aligned_cols=169  Identities=21%  Similarity=0.309  Sum_probs=133.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC----CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |+||||||+||||++++++|+++|++|++++|......    ......+++++.+|+++.     .+.++|+|||+|+..
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~A~~~  102 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHLASPA  102 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEECCSCC
T ss_pred             CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEECcccc
Confidence            68999999999999999999999999999999753211    111124688999999875     356899999999974


Q ss_pred             CC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcc--ccccccCcHHHHHHHHHHH
Q 027007           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ..  +..++.+.+++|+.++.++++++.+.+ . ++|++||..+|+.....+.+|..+.  .+..+.+.|+.+|..+|.+
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  180 (343)
T 2b69_A          103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  180 (343)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHH
Confidence            32  235677889999999999999999875 3 9999999999987654455554321  1112345699999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ++.++. .|++++++||+.+|||+.
T Consensus       181 ~~~~~~~~~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          181 CYAYMKQEGVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHhCCcEEEEEEcceeCcCC
Confidence            988764 599999999999999975

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-27  Score=189.27  Aligned_cols=188  Identities=23%  Similarity=0.146  Sum_probs=139.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC------CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~   74 (229)
                      |++|||||+|+||++++++|+++|++|++++|+.+ .+      .+.++++|++|.+++.++++      ++|+||||||
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc------ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            47999999999999999999999999999999865 21      45789999999999988876      7899999999


Q ss_pred             ccCC------CCC----CchhhhHhhHHHHHHHHHHHHhcCCC---------ceEEEEccceeeecCCCcccCCCCcccc
Q 027007           75 LVEP------WLP----DPSRFFAVNVEGLKNVVQAAKETKTV---------EKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        75 ~~~~------~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      ....      ..+    ++++.+++|+.++.++++++.+.+..         ++||++||..++.+.+.           
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  144 (242)
T 1uay_A           76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----------  144 (242)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----------
T ss_pred             ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----------
Confidence            7422      111    56788999999999999999875321         29999999987765332           


Q ss_pred             ccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhccccee-eeehhhHhhhhhhHHH
Q 027007          136 KYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLV-KDIFLLERMRHSCKFL  210 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  210 (229)
                         ...|+.+|...+.+.    .++.++|+++++++||.++||............+... .+. .++..++|++.++.|+
T Consensus       145 ---~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l  220 (242)
T 1uay_A          145 ---QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ-VPFPPRLGRPEEYAALVLHI  220 (242)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTT-CCSSCSCCCHHHHHHHHHHH
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhh-CCCcccCCCHHHHHHHHHHH
Confidence               245999998665554    4455569999999999999986322111111222222 223 5667788877766554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.95  E-value=2.1e-28  Score=194.38  Aligned_cols=185  Identities=19%  Similarity=0.070  Sum_probs=136.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn   84 (235)
T 3l6e_A            5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHC   84 (235)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence            58999999999999999999999999999998654332111  1257899999999999877765       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+.+..              ..|+.
T Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------------~~Y~a  150 (235)
T 3l6e_A           85 AGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE--------------SLYCA  150 (235)
T ss_dssp             CCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH--------------HHHHH
T ss_pred             CCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC--------------cHHHH
Confidence            997321      3346778999999999999999987642  2399999998877544322              45999


Q ss_pred             HHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          145 SKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       145 sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ||...+.+.+    ++.++|+++++++||.+.++.......          ....++..++|++.+..|+
T Consensus       151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------VDPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------CCCcCCCCHHHHHHHHHHH
Confidence            9996655554    455669999999999999986422111          1123567888887766554

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=4.7e-28  Score=197.07  Aligned_cols=160  Identities=24%  Similarity=0.257  Sum_probs=126.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...++++++|++|.+++.++++       ++|+||||
T Consensus         7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~   86 (281)
T 3m1a_A            7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNN   86 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            68999999999999999999999999999998765443211  1368899999999999887775       68999999


Q ss_pred             Cccc------CCCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||..      +.+.+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+.+.              .+.|+
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  152 (281)
T 3m1a_A           87 AGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG--------------FSAYS  152 (281)
T ss_dssp             CCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC--------------chHHH
Confidence            9973      12234567789999999888888876542   2469999999877654322              24599


Q ss_pred             HHHHHHHHHHHH----HHhcCCCeEEEecCceecCC
Q 027007          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       144 ~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~  175 (229)
                      .||...+.+++.    ++++|+++++++||.+++|.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (281)
T 3m1a_A          153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL  188 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence            999966666554    44579999999999999986

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.95  E-value=2.7e-27  Score=195.21  Aligned_cols=163  Identities=23%  Similarity=0.336  Sum_probs=129.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC----CCCCCC---CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPS---EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~----~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|||||||||||++++++|+++|++|++++|+...    ...+..   ..+++++.+|++          ++|+|||+|
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~~a   77 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYHLA   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEECC
Confidence            589999999999999999999999999999997652    222211   123445555554          789999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +....  ...++...++ |+.++.++++++.+.+ .++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.
T Consensus        78 ~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~  152 (321)
T 3vps_A           78 SHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSP---RSPYAASKVGLEM  152 (321)
T ss_dssp             CCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             ccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCC---CChhHHHHHHHHH
Confidence            87432  2345566778 9999999999999885 78999999999999876666666655443   4679999999999


Q ss_pred             HHHHHHh-cCC-CeEEEecCceecCCCCc
Q 027007          152 IALQAAS-EGL-PIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       152 ~~~~~~~-~gi-~~~~irpg~i~g~~~~~  178 (229)
                      +++.+.. +++ +++++||+.+|||+...
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~  181 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFFNVYGPGERP  181 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEECEEECTTCCT
T ss_pred             HHHHHHHHcCCCceEEEEeccccCcCCCC
Confidence            9999875 489 99999999999998643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=2.3e-28  Score=195.31  Aligned_cols=196  Identities=16%  Similarity=0.162  Sum_probs=142.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++| +.++.+.+    . ....+.++++|++|++++.++++       ++|
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899999999999999999999999999999 54332211    0 12367889999999999887765       699


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  150 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG--------------  150 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC--------------
Confidence            99999997422      234577889999999999999887653   2469999999876544321              


Q ss_pred             cCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|..    ++.++.++.++|+++++|+||.+.+|............... ..+.+++..++|++.+..|+-
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~~~~~l~  226 (246)
T 2uvd_A          151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLK-LIPAAQFGEAQDIANAVTFFA  226 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHH-TCTTCSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHc
Confidence            2459999994    45556666677999999999999998643221111111111 123456788888888776653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=6.1e-28  Score=193.24  Aligned_cols=195  Identities=12%  Similarity=0.128  Sum_probs=136.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC-CC-CCCCeEEEEccCCChhhHHhhc-------CCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG-LP-SEGALELVYGDVTDYRSLVDAC-------FGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~-~~-~~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~   71 (229)
                      ++|||||+|+||++++++|+++|++|++++|++ ++.+. +. ....+.++++|++|++++.+++       .++|+|||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   88 (249)
T 2ew8_A            9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN   88 (249)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            699999999999999999999999999999986 33221 10 1136788999999999987775       36899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|
T Consensus        89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  154 (249)
T 2ew8_A           89 NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA--------------YTHY  154 (249)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS--------------CHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--------------chhH
Confidence            9997432      224577889999999999999976543   2469999999887754322              2459


Q ss_pred             HHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCC-chhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          143 ERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKL-TTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       143 ~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      +.||...+.+    +.++.++|+++++|+||.+.++... ...............+.+++..|+|++.++.|+
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l  227 (249)
T 2ew8_A          155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFL  227 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHH
Confidence            9999955554    4555567999999999999998743 111000011111113345677888888877765

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.95  E-value=4.4e-29  Score=200.97  Aligned_cols=194  Identities=16%  Similarity=0.097  Sum_probs=142.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++ +|+.++.+..     .....+.++++|++|.+++.++++       ++|+
T Consensus         6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (258)
T 3oid_A            6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDV   85 (258)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999987 6664332211     112368899999999999877765       5799


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||...      .+.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  151 (258)
T 3oid_A           86 FVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN--------------Y  151 (258)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC--------------c
Confidence            999998632      1234577889999999999999997653   2359999999877654332              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||+..+.+.    .+++++|+++++++||.+.+|......   .....  .....+.++++.++|++.++.||-
T Consensus       152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p~~r~~~~~dva~~v~~L~  228 (258)
T 3oid_A          152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLED--ARQNTPAGRMVEIKDMVDTVEFLV  228 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHH--HHHHCTTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHH--HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            45999999555554    455567999999999999998643221   11111  112234567888999988877764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.95  E-value=5.1e-29  Score=202.56  Aligned_cols=196  Identities=19%  Similarity=0.150  Sum_probs=142.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  110 (277)
T 3gvc_A           31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVAN  110 (277)
T ss_dssp             EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999999999999999998654332111  1367889999999998877665       68999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+
T Consensus       111 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~  176 (277)
T 3gvc_A          111 AGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--------------TGAYG  176 (277)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------chhHH
Confidence            997422      334677899999999999999997753   2458999999877654332              24599


Q ss_pred             HHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhH----HHHHHhhc--ccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGN----LVAKLQWK--KVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||...+    .++.+++++|+++++|+||.+++|.......    ........  ...+.++++.++|++.++.||-
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  254 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHc
Confidence            9999554    5555666789999999999999985311100    00000000  0122356788999988877764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.8e-28  Score=199.51  Aligned_cols=195  Identities=16%  Similarity=0.119  Sum_probs=141.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-------------C----C-CCCCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------G----L-PSEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~----~-~~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+...             .    + .....+.++++|++|.+++.+++
T Consensus        17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (280)
T 3pgx_A           17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV   96 (280)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            6899999999999999999999999999998532111             0    0 01236788999999999988776


Q ss_pred             C-------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcc
Q 027007           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~  126 (229)
                      +       ++|+||||||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.  
T Consensus        97 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  174 (280)
T 3pgx_A           97 ADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG--  174 (280)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC--
Confidence            5       68999999997432      334677889999999999999997753    2458999999887654332  


Q ss_pred             cCCCCccccccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHH--hh-----cccce
Q 027007          127 ADENQVHEEKYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKL--QW-----KKVDL  193 (229)
Q Consensus       127 ~~~~~~~~~~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~--~~-----~~~~~  193 (229)
                                  ...|+.||...+    .++.+++++|+++++|+||.+++|......  ......  ..     ....+
T Consensus       175 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (280)
T 3pgx_A          175 ------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP  242 (280)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC
Confidence                        245999998554    555566678999999999999999753211  011000  00     11112


Q ss_pred             eeeehhhHhhhhhhHHHH
Q 027007          194 VKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       194 ~~~~~~~~~~~~~~~~l~  211 (229)
                      . ++..++|++.++.||-
T Consensus       243 ~-r~~~p~dvA~~v~~L~  259 (280)
T 3pgx_A          243 N-GFMTADEVADVVAWLA  259 (280)
T ss_dssp             S-SCBCHHHHHHHHHHHH
T ss_pred             C-CCCCHHHHHHHHHHHh
Confidence            2 4678888888877764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=2e-28  Score=198.83  Aligned_cols=196  Identities=17%  Similarity=0.151  Sum_probs=145.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++      ++|+||
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lv  114 (275)
T 4imr_A           35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILV  114 (275)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            6899999999999999999999999999999876544321     12468899999999998877765      689999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+...              ...
T Consensus       115 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~  180 (275)
T 4imr_A          115 INASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV--------------VTA  180 (275)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--------------chh
Confidence            99996321      334677889999999999999997653   2469999999877653221              234


Q ss_pred             HHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.||+..    +.++.+++++|+++++|+||.+.+|......   ............++++++.|+|++.++.||-
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  257 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLA  257 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHc
Confidence            99999954    4555666677999999999999998532111   0111111122224577888999998887764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=7.1e-28  Score=197.61  Aligned_cols=197  Identities=15%  Similarity=0.077  Sum_probs=147.1

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|  +||++++++|+++|++|++++|+.+..+.+.    ....+.++++|++|.+++.++++       ++|+
T Consensus        32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  111 (296)
T 3k31_A           32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDF  111 (296)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999997  9999999999999999999999853221111    11346789999999999887765       5899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||...          .+.++|++.+++|+.++.++++++.+.+.. ++||++||..++.+.+.             
T Consensus       112 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-------------  178 (296)
T 3k31_A          112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-------------  178 (296)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-------------
T ss_pred             EEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-------------
Confidence            999999742          123467789999999999999999987633 59999999877654322             


Q ss_pred             ccCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHH-HhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          138 FCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAK-LQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       138 ~~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                       ...|+.||+.    ++.++.+++++|+++++|+||.+.++........... .......++++++.++|++.++.||-.
T Consensus       179 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  257 (296)
T 3k31_A          179 -YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLS  257 (296)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             -chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence             2459999984    4555666667799999999999999976443221111 111222345778899999988877643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.95  E-value=4.4e-28  Score=196.64  Aligned_cols=194  Identities=18%  Similarity=0.217  Sum_probs=143.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC---CCC-CCCCCeEEEEccCCChhhHHhhcC------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI---SGL-PSEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~-~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~   71 (229)
                      ++|||||+|+||++++++|+++|++|++++|+....   +.+ .....+.++++|++|.+++.++.+      ++|+|||
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~  112 (273)
T 3uf0_A           33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVN  112 (273)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence            689999999999999999999999999999764210   011 112367889999999998876643      6899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ...|
T Consensus       113 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------~~~Y  178 (273)
T 3uf0_A          113 NAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--------------VAAY  178 (273)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------------CHHH
T ss_pred             CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--------------ChhH
Confidence            9997432      334577899999999999999987653   2469999999887754332              2459


Q ss_pred             HHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.||...+    .++.+++++|+++++|+||.+++|.....   .......  ....+.++++.++|++.++.|+-
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~p~~r~~~pedva~~v~~L~  252 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEI--TARIPAGRWATPEDMVGPAVFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHH--HHHSTTSSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHH--HhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999554    55556667799999999999999864221   1111111  12234567888999998877764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.95  E-value=3.2e-27  Score=194.79  Aligned_cols=159  Identities=21%  Similarity=0.267  Sum_probs=106.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++|++|++++|+.+.     .  +  ++.+|++|++++.+++++  +|+|||+|+....
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~--~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P--K--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC-----
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C--C--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence            589999999999999999999999999999987543     1  2  678999999999888874  8999999997432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..++++.+++|+.++.++++++.+.+ . +|||+||..+|+.. ..+.+|..+..+   .+.|+.+|..+|.+++.+
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~-~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGT-NPPYREEDIPAP---LNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             --------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSS-SCSBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCC-CCCCCCCCCCCC---cCHHHHHHHHHHHHHHHh
Confidence              345678899999999999999999875 3 99999999999873 334455443322   467999999999999886


Q ss_pred             HhcCCCeEEEecCceecCCCC
Q 027007          157 ASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~  177 (229)
                         +++++++||+.+|||...
T Consensus       148 ---~~~~~~lR~~~v~G~~~~  165 (315)
T 2ydy_A          148 ---NLGAAVLRIPILYGEVEK  165 (315)
T ss_dssp             ---CTTCEEEEECSEECSCSS
T ss_pred             ---CCCeEEEeeeeeeCCCCc
Confidence               467899999999999764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.95  E-value=8.5e-27  Score=190.17  Aligned_cols=195  Identities=18%  Similarity=0.142  Sum_probs=144.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC--------------------C-CCCCCeEEEEccCCChhhHH
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------------------L-PSEGALELVYGDVTDYRSLV   60 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--------------------~-~~~~~~~~~~~D~~~~~~~~   60 (229)
                      ++|||||+|+||++++++|+++|++|++++|+......                    + .....+.++++|++|.+++.
T Consensus        13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   92 (286)
T 3uve_A           13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALK   92 (286)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH
Confidence            68999999999999999999999999999997432110                    0 01246889999999999988


Q ss_pred             hhcC-------CccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecC
Q 027007           61 DACF-------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGST  122 (229)
Q Consensus        61 ~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~  122 (229)
                      ++++       ++|+||||||....       +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.
T Consensus        93 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (286)
T 3uve_A           93 AAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY  172 (286)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC
Confidence            7765       68999999997422       234577899999999999999998764    23599999998877543


Q ss_pred             CCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHH--------------H
Q 027007          123 DGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV--------------A  184 (229)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~--------------~  184 (229)
                      +.              ...|+.||.    +++.++.+++++|+++++|+||.+.+|.......+.              .
T Consensus       173 ~~--------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T 3uve_A          173 PH--------------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA  238 (286)
T ss_dssp             TT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             CC--------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH
Confidence            32              235999999    555556667778999999999999999754321110              1


Q ss_pred             HHh-hcccceeeeehhhHhhhhhhHHHH
Q 027007          185 KLQ-WKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       185 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ... .....+ ++++.|+|++.++.||-
T Consensus       239 ~~~~~~~~~p-~r~~~p~dvA~~v~fL~  265 (286)
T 3uve_A          239 PICQMFHTLP-IPWVEPIDISNAVLFFA  265 (286)
T ss_dssp             HHHHTTCSSS-CSCBCHHHHHHHHHHHH
T ss_pred             HHHHhhhccC-CCcCCHHHHHHHHHHHc
Confidence            100 111122 67888999998888765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=1e-28  Score=199.77  Aligned_cols=196  Identities=18%  Similarity=0.162  Sum_probs=139.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++.+++.. ..+.+     .....+.++++|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999866433 21111     012367889999999999887765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+. .++||++||..++.+.+.              ...
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  174 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS--------------YGI  174 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT--------------CHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC--------------chH
Confidence            9999997432      2235778899999999999999988753 249999999876654332              235


Q ss_pred             HHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.||+..+.+.+    +++++|+++++|+||.+.+|..................+.++++.|+|++.++.||.
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999996555554    455569999999999999986422111001111223345678889999998887764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-28  Score=197.75  Aligned_cols=195  Identities=15%  Similarity=0.170  Sum_probs=141.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.       ....+.++++|++|.+++.++++       ++|
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   94 (267)
T 1iy8_A           15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   94 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999864332210       02367889999999999887765       689


Q ss_pred             EEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....       +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.             
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  161 (267)
T 1iy8_A           95 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-------------  161 (267)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------------
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC-------------
Confidence            99999997432       224577889999999999998886653   2469999999876643321             


Q ss_pred             ccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch-----hHHHHHH--hhcccceeeeehhhHhhhhh
Q 027007          138 FCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT-----GNLVAKL--QWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       138 ~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~  206 (229)
                       ...|+.+|...+    .++.++.++|+++++|+||.+++|.....     .......  ......+.++++.++|++.+
T Consensus       162 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~  240 (267)
T 1iy8_A          162 -QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV  240 (267)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHH
Confidence             245999999555    44555666799999999999999853110     0011100  11112234677889998887


Q ss_pred             hHHH
Q 027007          207 CKFL  210 (229)
Q Consensus       207 ~~~l  210 (229)
                      +.|+
T Consensus       241 v~~l  244 (267)
T 1iy8_A          241 VAFL  244 (267)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7665

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.95  E-value=4.7e-27  Score=191.74  Aligned_cols=188  Identities=17%  Similarity=0.171  Sum_probs=142.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEccCCChhhHHhhcC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~-----   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..            ...+.++++|++|.+++.++++     
T Consensus        11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   90 (285)
T 3sc4_A           11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQ   90 (285)
T ss_dssp             EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999876544321            1368899999999999877765     


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecC-CCcccCCCCc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGST-DGYIADENQV  132 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~-~~~~~~~~~~  132 (229)
                        ++|+||||||....      +.++|++.+++|+.+++++++++.+.+.   .++||++||..++.+. ..        
T Consensus        91 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  162 (285)
T 3sc4_A           91 FGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR--------  162 (285)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC--------
Confidence              68999999997422      2245778899999999999999988753   3599999998766432 11        


Q ss_pred             cccccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecC-ceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          133 HEEKYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPG-VIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg-~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                            ...|+.||+..+    .++.+++++|+++++|+|| .+.++.       ... ......+.++...|++++.++
T Consensus       163 ------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-------~~~-~~~~~~~~~r~~~pedvA~~~  228 (285)
T 3sc4_A          163 ------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-------VQN-LLGGDEAMARSRKPEVYADAA  228 (285)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-------HHH-HHTSCCCCTTCBCTHHHHHHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-------HHh-hccccccccCCCCHHHHHHHH
Confidence                  245999999555    4455556679999999999 455442       111 122233456778899998887


Q ss_pred             HHHH
Q 027007          208 KFLT  211 (229)
Q Consensus       208 ~~l~  211 (229)
                      .|+-
T Consensus       229 ~~l~  232 (285)
T 3sc4_A          229 YVVL  232 (285)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7664

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.95  E-value=3.7e-27  Score=205.28  Aligned_cols=173  Identities=25%  Similarity=0.299  Sum_probs=139.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC---CCeEEEEEcCCCCCC------C-CCC-------------CCCeEEEEccCC---
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ---GHSVRALVRRTSDIS------G-LPS-------------EGALELVYGDVT---   54 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~---g~~V~~~~r~~~~~~------~-~~~-------------~~~~~~~~~D~~---   54 (229)
                      |+||||||+||||++++++|+++   |++|++++|+.+...      . +..             ..+++++.+|++   
T Consensus        74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~  153 (478)
T 4dqv_A           74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPD  153 (478)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcc
Confidence            68999999999999999999999   899999999864211      0 000             137899999998   


Q ss_pred             ---ChhhHHhhcCCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCC
Q 027007           55 ---DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        55 ---~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                         |.+++.++++++|+|||+|+....  .++.+.+++|+.++.+++++|.+.+ .++|||+||.++|+.......+|+.
T Consensus       154 ~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~~  230 (478)
T 4dqv_A          154 LGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDA  230 (478)
T ss_dssp             GGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred             cCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCcc
Confidence               667888888899999999998654  5667889999999999999998874 6799999999998875544444444


Q ss_pred             ccccc--------cccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          132 VHEEK--------YFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       132 ~~~~~--------~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      ...+.        .+.+.|+.+|.++|.+++++.+ .|++++++|||++||+..
T Consensus       231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred             cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence            32211        1224599999999999999875 599999999999999853

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=9.8e-28  Score=193.56  Aligned_cols=195  Identities=17%  Similarity=0.132  Sum_probs=125.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhc--------CCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~--------~~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+...     ....+.++.+|++|.+++.+++        .++|
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            36999999999999999999999999999999764322210     1136788999999999887776        5689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  160 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------------  160 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC--------------
Confidence            99999997321      223567789999999999999996532   3569999999887754321              


Q ss_pred             cCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+.+.    +.++|+++++++||+++||...... ........ ...+.+++..+++++.++.|+
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l  236 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVI-SRKPLGRFGEPEEVSSLVAFL  236 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence            24599999976666554    4456999999999999999743211 10011111 112334566777777666554

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=1e-28  Score=200.76  Aligned_cols=195  Identities=13%  Similarity=0.114  Sum_probs=145.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...      ....+.++++|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999864322210      12368899999999999877765       6899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||...      .+.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+..              
T Consensus       109 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  174 (277)
T 4fc7_A          109 LINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ--------------  174 (277)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------------
T ss_pred             EEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------------
Confidence            999999632      1334678899999999999999997654   23599999998877544322              


Q ss_pred             CcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCc----hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLT----TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||+.    ++.++.+++++|+++++|+||.++++....    .......  .....++++++.++|++.++.||-
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~p~~r~~~p~dvA~~v~fL~  252 (277)
T 4fc7_A          175 VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLST--KVTASPLQRLGNKTEIAHSVLYLA  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHH--HHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHH--HhccCCCCCCcCHHHHHHHHHHHc
Confidence            349999984    455556666779999999999999984211    1111111  122334578889999998888765


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       253 s  253 (277)
T 4fc7_A          253 S  253 (277)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=1.9e-28  Score=197.30  Aligned_cols=196  Identities=15%  Similarity=0.132  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCC------CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++ .+.+..      ...+.++++|++|++++.++++       ++|
T Consensus         6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   85 (260)
T 1x1t_A            6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            69999999999999999999999999999998654 322110      1357889999999999877765       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              
T Consensus        86 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  151 (260)
T 1x1t_A           86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN--------------  151 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC--------------
Confidence            99999997432      234577889999999999999997653   2469999999877654322              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhH-HH-------HHHhh---cccceeeeehhhHhh
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGN-LV-------AKLQW---KKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~-~~-------~~~~~---~~~~~~~~~~~~~~~  203 (229)
                      ...|+.||...+.+.    .+++++|+++++|+||++.+|....... ..       .....   ....+.+++..|+|+
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv  231 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL  231 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHH
Confidence            245999999665555    4555669999999999999986432110 00       00000   111234567788888


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.|+-
T Consensus       232 a~~~~~l~  239 (260)
T 1x1t_A          232 GGTAVFLA  239 (260)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88776653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-28  Score=197.69  Aligned_cols=195  Identities=22%  Similarity=0.184  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (256)
T 1geg_A            4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   83 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999764332210     01357889999999999887775       79999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.++|++.+++|+.++.++++++.+.+   . .++||++||..++.+.+.              .
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  149 (256)
T 1geg_A           84 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--------------L  149 (256)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC--------------c
Confidence            999996321      224577889999999999999988753   2 469999999876543221              2


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh-----------HHHHHHhhcccceeeeehhhHhhh
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG-----------NLVAKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  204 (229)
                      ..|+.||...+    .++.++.++|+++++|+||.+.+|......           ......+. ...+.+++..|+|++
T Consensus       150 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~r~~~p~dvA  228 (256)
T 1geg_A          150 AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA-KRITLGRLSEPEDVA  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH-TTCTTCSCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHH-hcCCCCCCcCHHHHH
Confidence            45999999554    455556667999999999999998531110           00011111 122346678899988


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.|+-
T Consensus       229 ~~v~~l~  235 (256)
T 1geg_A          229 ACVSYLA  235 (256)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            8877663

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=3e-28  Score=196.17  Aligned_cols=194  Identities=15%  Similarity=0.099  Sum_probs=141.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    . ....+.++.+|++|.+++.++++       ++|+|
T Consensus        16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   95 (260)
T 2zat_A           16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL   95 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999986433221    0 12357889999999998877765       79999


Q ss_pred             EEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||...       .+.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              .
T Consensus        96 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  161 (260)
T 2zat_A           96 VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN--------------L  161 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC--------------c
Confidence            99999632       1223577889999999999999987642   3469999999987754322              2


Q ss_pred             CcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+    +.++.++|+++++++||.+.++.....  ....... .....+.++++.++|++.++.|+
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~v~~l  237 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEY-MKESLRIRRLGNPEDCAGIVSFL  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHH-HHHHHTCSSCBCGGGGHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHH-HHhcCCCCCCCCHHHHHHHHHHH
Confidence            4599999955555    455556799999999999999864210  0001111 11122345678888888877665

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=1.6e-27  Score=192.50  Aligned_cols=187  Identities=19%  Similarity=0.154  Sum_probs=139.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++      ...+.++++|++|.+++.++++       ++|+|||||
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            369999999999999999999999999999998654      1357889999999999887765       689999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  148 (264)
T 2dtx_A           83 GIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN--------------ASAYVT  148 (264)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT--------------BHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC--------------chhHHH
Confidence            97422      223577889999999999999998764   2369999999877654322              245999


Q ss_pred             HHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch--------h----HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT--------G----NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       145 sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      ||...+.+.+.+    .++ +++++|+||.+.++.....        .    ..... . ....+.+++..++|++.+..
T Consensus       149 sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~p~~~~~~p~dvA~~v~  225 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISE-W-GHEHPMQRIGKPQEVASAVA  225 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHH-H-HHHSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHH-H-HhcCCCCCCcCHHHHHHHHH
Confidence            999666665544    445 9999999999998753111        0    11111 1 11123456778888887776


Q ss_pred             HH
Q 027007          209 FL  210 (229)
Q Consensus       209 ~l  210 (229)
                      |+
T Consensus       226 ~l  227 (264)
T 2dtx_A          226 FL  227 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=3e-28  Score=195.95  Aligned_cols=194  Identities=20%  Similarity=0.169  Sum_probs=143.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++  .+.+    . ....+.++++|++|.+++.++++       ++|
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (258)
T 3a28_C            4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFD   83 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999998654  2211    1 12368889999999999877765       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CC-ceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....      +.++|++.+++|+.+++++++++.+.+   +. ++||++||..++.+.+.             
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  150 (258)
T 3a28_C           84 VLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI-------------  150 (258)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC-------------
Confidence            99999997432      224577889999999999999998753   23 79999999877644322             


Q ss_pred             ccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCch------------hHHHHHHhhcccceeeeehhhH
Q 027007          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTT------------GNLVAKLQWKKVDLVKDIFLLE  201 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  201 (229)
                       ...|+.+|...+.    ++.++.++|+++++++||.+.++.....            ...... . ....+.++++.|+
T Consensus       151 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~p~~r~~~p~  227 (258)
T 3a28_C          151 -LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE-Y-SSSIALGRPSVPE  227 (258)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHH-H-HTTCTTSSCBCHH
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHH-H-HhcCCCCCccCHH
Confidence             2459999995554    4555566799999999999998853110            011111 1 1122345678899


Q ss_pred             hhhhhhHHHH
Q 027007          202 RMRHSCKFLT  211 (229)
Q Consensus       202 ~~~~~~~~l~  211 (229)
                      |++.++.|+-
T Consensus       228 dvA~~v~~l~  237 (258)
T 3a28_C          228 DVAGLVSFLA  237 (258)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9988877764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=4.6e-28  Score=196.22  Aligned_cols=195  Identities=16%  Similarity=0.105  Sum_probs=142.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++++..+ .+.    +. ....+.++++|++|.+++.++++       ++|+
T Consensus        20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999998876421 111    10 12368899999999999877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEcccee-eecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+. .++||++||..+ ..+.+.              ..
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~  165 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK--------------HS  165 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT--------------CH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC--------------Cc
Confidence            9999997432      3346788899999999999999998863 249999999762 211111              24


Q ss_pred             cHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCc------------hhHHHHHHhhcccceeeeehhhHhhh
Q 027007          141 QYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLT------------TGNLVAKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       141 ~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (229)
                      .|+.||...    +.++++++++|+++++|+||.+.+|....            ....... ......++++++.|+|++
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~~p~dvA  244 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQ-MAAHASPLHRNGWPQDVA  244 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHH-HHHHHSTTCSCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHH-HHHhcCCCCCCCCHHHHH
Confidence            599999954    45556666779999999999999986321            0111111 122233467888899999


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.||-
T Consensus       245 ~~v~~L~  251 (270)
T 3is3_A          245 NVVGFLV  251 (270)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            8887764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=4.7e-28  Score=196.84  Aligned_cols=199  Identities=17%  Similarity=0.084  Sum_probs=143.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC------------C-----CCCCCeEEEEccCCChhhHHhhcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------------L-----PSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~------------~-----~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+......            .     .....+.++++|++|.+++.++++
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   94 (278)
T 3sx2_A           15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQ   94 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            68999999999999999999999999999987321110            0     001468899999999999988775


Q ss_pred             -------CccEEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCC
Q 027007           65 -------GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                             ++|+||||||....  ..++|++.+++|+.+++++++++.+.+    ..++||++||..++.+...+.     
T Consensus        95 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----  169 (278)
T 3sx2_A           95 AGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD-----  169 (278)
T ss_dssp             HHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC-----
Confidence                   68999999997432  335678899999999999999987754    235999999987664321100     


Q ss_pred             ccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHh--------hcccceeeee
Q 027007          132 VHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQ--------WKKVDLVKDI  197 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~--------~~~~~~~~~~  197 (229)
                           +....|+.||+..    +.++.+++++|+++++|+||.+++|+.....  .+.....        .....+ +++
T Consensus       170 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~  243 (278)
T 3sx2_A          170 -----PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEV  243 (278)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSS
T ss_pred             -----CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCc
Confidence                 1124599999954    4555566677999999999999999754321  1111111        111122 567


Q ss_pred             hhhHhhhhhhHHHH
Q 027007          198 FLLERMRHSCKFLT  211 (229)
Q Consensus       198 ~~~~~~~~~~~~l~  211 (229)
                      ..|+|++.++.|+-
T Consensus       244 ~~p~dvA~~v~~l~  257 (278)
T 3sx2_A          244 LAPEDVANAVAWLV  257 (278)
T ss_dssp             BCHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHh
Confidence            78888888877653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=1.9e-27  Score=190.13  Aligned_cols=188  Identities=22%  Similarity=0.210  Sum_probs=137.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+      ..+++|++|++++.++++       ++|+||||||
T Consensus        17 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   90 (247)
T 1uzm_A           17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh------cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            689999999999999999999999999999987655433      247899999999877765       5899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~s  156 (247)
T 1uzm_A           91 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN--------------QANYAAS  156 (247)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C--------------CHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC--------------ChhHHHH
Confidence            7421      234677899999999999999987643   3469999999876643321              2459999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |.    +++.+++++.++|+++++++||.+.++.............. ...+.+++..++|++.++.|+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~~~~~l  224 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGAL-QFIPAKRVGTPAEVAGVVSFL  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHG-GGCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence            99    44555566667799999999999998753111111111111 122345677888888777665

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.7e-28  Score=196.77  Aligned_cols=191  Identities=20%  Similarity=0.162  Sum_probs=119.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|++++.++++       ++|+|
T Consensus        11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T 3qiv_A           11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL   90 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999865433211     12367889999999999887765       78999


Q ss_pred             EEeCcccC---------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           70 FHTAALVE---------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        70 i~~a~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |||||...         .+.+++++.+++|+.++.++++++.+.+   ..++||++||..++..                
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  154 (253)
T 3qiv_A           91 VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY----------------  154 (253)
T ss_dssp             EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred             EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC----------------
Confidence            99999721         1234567889999999999999887653   2468999999987732                


Q ss_pred             ccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.||+..+.+.+.    +.++|+++++++||.+++|....... .....+ ....+.++++.++|++.++.|+
T Consensus       155 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l  230 (253)
T 3qiv_A          155 -SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDI-VKGLPLSRMGTPDDLVGMCLFL  230 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHH-hccCCCCCCCCHHHHHHHHHHH
Confidence             13499999966655554    44568999999999999996532211 111111 1223345667788877776654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=1e-26  Score=188.39  Aligned_cols=194  Identities=18%  Similarity=0.173  Sum_probs=144.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++++.. +.+.    +. ....+.++++|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6899999999999999999999999999977642 1111    10 12367899999999999887765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeec-CCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGS-TDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+. .++||++||..+... .+.              ..
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~--------------~~  178 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPG--------------IS  178 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTT--------------CH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCC--------------ch
Confidence            9999997422      3346788999999999999999998753 359999999654322 111              24


Q ss_pred             cHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||+..    +.++++++++|+++++|+||.+.+|.............  ...+.++++.|+|++.++.||-
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQR--ERIATGSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHH--HTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHH--hcCCCCCCCCHHHHHHHHHHHh
Confidence            599999954    45556666779999999999999997543332222222  1223467888999988877764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=2.6e-28  Score=196.63  Aligned_cols=192  Identities=18%  Similarity=0.126  Sum_probs=137.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++........++.++.+|++|.+++.++++       ++|+||||||
T Consensus        29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg  108 (260)
T 3gem_A           29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNAS  108 (260)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            589999999999999999999999999999987542211111247889999999999877764       6899999999


Q ss_pred             ccCCC-----CCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           75 LVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        75 ~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      .....     .++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ...|+.||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~asK  174 (260)
T 3gem_A          109 EWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK--------------HIAYCATK  174 (260)
T ss_dssp             CCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS--------------CHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC--------------cHhHHHHH
Confidence            74321     13466789999999999999997753   2369999999887654332              24599999


Q ss_pred             HHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          147 AVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       147 ~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +..+.+.+    ++++ ++++++|+||.+.++.... ..+....  ....+.++++.++|++.++.|+.
T Consensus       175 aa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~-~~~~~~~--~~~~p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          175 AGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD-AAYRANA--LAKSALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------CCSCCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC-HHHHHHH--HhcCCCCCCCCHHHHHHHHHHHh
Confidence            96555554    4444 6999999999999986421 1111111  12234567788999998888874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=3.6e-28  Score=195.74  Aligned_cols=195  Identities=17%  Similarity=0.107  Sum_probs=134.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++++.. ..+.    + .....+.++++|++|.+++.++++       ++|+
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6899999999999999999999999999955432 1111    1 112367889999999999887765       6899


Q ss_pred             EEEeCccc-C------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceee-ecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALV-E------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~-~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||.. .      .+.++|++.+++|+.+++++++++.+.+. .++||++||..++ .+.+.              .
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  155 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG--------------A  155 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT--------------C
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC--------------c
Confidence            99999864 1      12234678899999999999999998763 2499999998876 33222              2


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||+..+.+.+.    ++++ +++++|+||.+.++..................+.++++.++|++.++.||-
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            4599999966655554    4444 999999999999986533211111111223345677888999988877764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=2.5e-27  Score=192.14  Aligned_cols=196  Identities=17%  Similarity=0.227  Sum_probs=143.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +.....+.++++|++|++++.++++       ++|+||
T Consensus        18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   97 (278)
T 2bgk_A           18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMF   97 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            69999999999999999999999999999997543221    1111268899999999999988775       689999


Q ss_pred             EeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||....        +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.             ..
T Consensus        98 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------~~  164 (278)
T 2bgk_A           98 GNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------------VS  164 (278)
T ss_dssp             ECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-------------SC
T ss_pred             ECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-------------CC
Confidence            99996421        113467789999999999999998753   2469999999987765320             12


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch----hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT----GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+++.+    .++|+++++++||+++||.....    .............+.+++..++|++.++.|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  243 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL  243 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHH
Confidence            45999999777666554    45699999999999999975321    1222222222212235577888888776654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=2.3e-28  Score=195.85  Aligned_cols=194  Identities=17%  Similarity=0.165  Sum_probs=142.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++.+|++|++++.++++       ++|+
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999999999999999999764322110     11367889999999999988775       7999


Q ss_pred             EEEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||||....     +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ..
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~  157 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------MT  157 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------Cc
Confidence            9999997432     223467789999999999999987542   2469999999877654321              24


Q ss_pred             cHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCc--hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .|+.+|...+.+++.+    ..+|+++++++||.++||....  ...+......  ..+..+++.++|++.++.|+
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ--HTPIRRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHH--TCSSCSCBCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHh--cCCcccCCCHHHHHHHHHHH
Confidence            5999999777666554    4458999999999999985321  1222222221  12345677788877766554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.95  E-value=2.9e-27  Score=195.11  Aligned_cols=164  Identities=24%  Similarity=0.277  Sum_probs=134.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~   77 (229)
                      |||||||+||||++++++|+++  |++|++++|+.+...      .++++.+|++|++++.++++  ++|+|||+|+...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            6899999999999999999998  899999999764432      45788999999999999987  8999999998642


Q ss_pred             C-CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-CcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                      . ...++++.+++|+.++.++++++.+.+ .++||++||..+|+... ..+.+|..+..   +.+.|+.+|..+|.+++.
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~---p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITR---PRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCC---CCSHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCC---CCchHHHHHHHHHHHHHH
Confidence            1 224567889999999999999999874 68999999999998642 23344443322   346799999999999988


Q ss_pred             HH-hcCCCeEEEecCceecCC
Q 027007          156 AA-SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       156 ~~-~~gi~~~~irpg~i~g~~  175 (229)
                      +. .+|++++++||+.+||+.
T Consensus       151 ~~~~~~~~~~~lR~~~~~g~~  171 (317)
T 3ajr_A          151 YYEKFGLDVRSLRYPGIISYK  171 (317)
T ss_dssp             HHHHHCCEEEEEEECEEECSS
T ss_pred             HHHhcCCeEEEEecCcEeccC
Confidence            75 459999999999999975

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=1.9e-28  Score=197.50  Aligned_cols=190  Identities=20%  Similarity=0.206  Sum_probs=140.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|++++.++++       ++|+||||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~   88 (260)
T 1nff_A            9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999998644322110  1147889999999999988776       79999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  154 (260)
T 1nff_A           89 AGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA--------------CHGYT  154 (260)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC--------------chhHH
Confidence            997422      223577889999999999988886643   2469999999887654321              24599


Q ss_pred             HHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+|...+.+.+    ++.++|+++++++||.+++|......    ..+.  ..+.+++..++|++.++.|+-
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~--~~~~~~~~~~~dvA~~v~~l~  220 (260)
T 1nff_A          155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP----EDIF--QTALGRAAEPVEVSNLVVYLA  220 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC----TTCS--CCSSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccch----hhHH--hCccCCCCCHHHHHHHHHHHh
Confidence            99996665554    45567999999999999998642100    0011  123456777888887776653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=2.9e-28  Score=197.42  Aligned_cols=197  Identities=15%  Similarity=0.154  Sum_probs=142.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+.. ...+.++++|++|.+++.++++       ++|+|||||
T Consensus        11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA   90 (270)
T 1yde_A           11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA   90 (270)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            68999999999999999999999999999998643322111 1247889999999999887765       689999999


Q ss_pred             cccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....       +.++|++.+++|+.++.++++++.+.+  ..++||++||..++.+.+.              ...|+.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  156 (270)
T 1yde_A           91 GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------------AVPYVA  156 (270)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT--------------CHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC--------------CcccHH
Confidence            97431       123467889999999999999998653  1369999999866543221              235999


Q ss_pred             HHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch----hHHHHHHh-hcccceeeeehhhHhhhhhhHHHHH
Q 027007          145 SKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT----GNLVAKLQ-WKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       145 sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      +|...+.+.    .+++++|+++++|+||+++||.....    ........ .....++++++.++|++.++.|+-.
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s  233 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS  233 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc
Confidence            999665554    45556799999999999999852110    00111111 1112345677889999988887754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=5.2e-28  Score=196.55  Aligned_cols=196  Identities=16%  Similarity=0.125  Sum_probs=141.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +.....+.++++|++|.+++.++++       ++|+||
T Consensus        31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  110 (276)
T 2b4q_A           31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILV  110 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999997643221    1111257888999999998877765       689999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CC----ceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV----EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~----~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||....      +.++|++.+++|+.+++++++++.+.+   ..    ++||++||..++.+.+..            
T Consensus       111 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~------------  178 (276)
T 2b4q_A          111 NNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ------------  178 (276)
T ss_dssp             ECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC------------
Confidence            99996422      234577899999999999999887643   12    699999998876543221            


Q ss_pred             ccC-cHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhc-ccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCT-QYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWK-KVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~-~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        . .|+.||...+.+.    .++.++|+++++|+||.+.++............... ...+.+++..++|++.++.|+-
T Consensus       179 --~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  256 (276)
T 2b4q_A          179 --AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLA  256 (276)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHH
T ss_pred             --ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHh
Confidence              2 5999999665555    455567999999999999998742211101111111 0223456788888888777653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=5e-28  Score=194.90  Aligned_cols=195  Identities=16%  Similarity=0.115  Sum_probs=141.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhc--------CCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~--------~~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...     ....+.++++|++|++++.+++        .++|+
T Consensus        11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   90 (260)
T 2ae2_A           11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   90 (260)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            6999999999999999999999999999999864332210     1135788999999999987776        57999


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              .
T Consensus        91 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  156 (260)
T 2ae2_A           91 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY--------------E  156 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------c
Confidence            9999997422      234577889999999999999997643   3469999999876643221              2


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCc---hhHHHHH--HhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT---TGNLVAK--LQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.||...+.+.+.    +.++|+++++++||.+++|....   .......  .+.. ..+.+++..++|++.+..|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~v~~l  235 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-RCALRRMGEPKELAAMVAFL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH-TSTTCSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            4599999966666554    44569999999999999985211   0111110  1111 12346778899988877665


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       236 ~  236 (260)
T 2ae2_A          236 C  236 (260)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=2.4e-28  Score=196.85  Aligned_cols=194  Identities=16%  Similarity=0.136  Sum_probs=141.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+  |+||++++++|+++|++|++++|+.+   ..+++.. .+.+.++++|++|++++.++++       ++|+
T Consensus        10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   89 (261)
T 2wyu_A           10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (261)
T ss_dssp             EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999  99999999999999999999999763   1111111 1236889999999999887765       6899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||...          .+.++|++.+++|+.++.++++++.+.+. .++||++||..++.+.+.             
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  156 (261)
T 2wyu_A           90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-------------  156 (261)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC-------------
Confidence            999999642          12345778899999999999999988752 259999999876543221             


Q ss_pred             ccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.||...+.+.    .+++++|+++++|+||.+++|.....   ...... .. ...+.+++..++|++.++.|+
T Consensus       157 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~-~~~p~~~~~~~~dva~~v~~l  233 (261)
T 2wyu_A          157 -YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDR-VA-QTAPLRRNITQEEVGNLGLFL  233 (261)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHH-HH-HHSTTSSCCCHHHHHHHHHHH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHH-HH-hcCCCCCCCCHHHHHHHHHHH
Confidence             235999999665554    45556699999999999999864321   111111 11 112345677888888877665


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       234 ~  234 (261)
T 2wyu_A          234 L  234 (261)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=2e-28  Score=197.65  Aligned_cols=195  Identities=22%  Similarity=0.231  Sum_probs=143.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.++...  ...+.++++|++|.+++.++++       ++|+|||
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvn   86 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH   86 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            369999999999999999999999999999998654322110  1367889999999999877765       4799999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |||....      +.++|++.+++|+.++.++++++.+.+. .++||++||..++ +.+.              ...|+.
T Consensus        87 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~--------------~~~Y~a  151 (263)
T 2a4k_A           87 FAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG--------------LAHYAA  151 (263)
T ss_dssp             GGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH--------------HHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC--------------cHHHHH
Confidence            9997432      2235677899999999999999988752 3599999998877 3211              245999


Q ss_pred             HHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ||.    +++.++.++.++|+++++|+||.++++................ .+.+++..++|++.+..|+-
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~p~~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA-SPLGRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHT-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            998    5555666666779999999999999986432211111112121 23456778888888776653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.95  E-value=5.6e-28  Score=197.01  Aligned_cols=198  Identities=19%  Similarity=0.112  Sum_probs=142.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +. ....+.++++|++|++++.++++       ++|+|
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (283)
T 3v8b_A           30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIV  109 (283)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999998654322    11 12468899999999998877765       68999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....       +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.....+            ..
T Consensus       110 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~------------~~  177 (283)
T 3v8b_A          110 VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTP------------GA  177 (283)
T ss_dssp             EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCST------------TC
T ss_pred             EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCC------------Cc
Confidence            999997421       223577889999999999999996643   24699999998765421111            12


Q ss_pred             CcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHH-H-----hhccccee--eeehhhHhhhhhh
Q 027007          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAK-L-----QWKKVDLV--KDIFLLERMRHSC  207 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~-~-----~~~~~~~~--~~~~~~~~~~~~~  207 (229)
                      ..|+.||+..+.+.+    +++++|+++++|+||.+.+|........... .     ......++  ++++.|+|++.++
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v  257 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHH
Confidence            459999996555554    4556799999999999999975332100010 0     00111223  5677888888887


Q ss_pred             HHHH
Q 027007          208 KFLT  211 (229)
Q Consensus       208 ~~l~  211 (229)
                      .||-
T Consensus       258 ~fL~  261 (283)
T 3v8b_A          258 RFLV  261 (283)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            7763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=7e-28  Score=193.65  Aligned_cols=195  Identities=17%  Similarity=0.084  Sum_probs=141.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    . ....++++++|++|++++.++++       ++|+|
T Consensus        15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   94 (260)
T 3awd_A           15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDIL   94 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999975432211    0 11368899999999999888765       68999


Q ss_pred             EEeCcccC-C------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||... .      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+..            +.
T Consensus        95 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------~~  162 (260)
T 3awd_A           95 VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ------------QQ  162 (260)
T ss_dssp             EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS------------CC
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC------------Cc
Confidence            99999643 1      112456789999999999999987642   24699999998765432211            11


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCC-ch--hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKL-TT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+.+.+    .++|+++++++||.++||... ..  ..+..... . ..+.+++..+++++.++.|+
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dva~~~~~l  238 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWI-A-GTPMGRVGQPDEVASVVQFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHH-H-TCTTSSCBCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHH-h-cCCcCCCCCHHHHHHHHHHH
Confidence            45999999777666554    456999999999999999753 11  12222211 1 12335677788887776655

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-28  Score=197.20  Aligned_cols=195  Identities=18%  Similarity=0.185  Sum_probs=143.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    . ....+.++++|++|++++.++++       ++|+|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   88 (262)
T 1zem_A            9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   88 (262)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999986433221    1 12367889999999998877664       68999


Q ss_pred             EEeCccc-CC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||.. ..      +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.              .
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (262)
T 1zem_A           89 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------M  154 (262)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT--------------B
T ss_pred             EECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------C
Confidence            9999964 21      224577889999999999999998763   2469999999877654322              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---------------hHH-HHHHhhcccceeeeehh
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---------------GNL-VAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---------------~~~-~~~~~~~~~~~~~~~~~  199 (229)
                      ..|+.||.    +++.++.++.++|+++++|+||.+.++.....               ... ....+ ....+.++++.
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~  233 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQM-IGSVPMRRYGD  233 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHH-HHTSTTSSCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHH-HhcCCCCCCcC
Confidence            35999997    55566666777899999999999998853110               000 11111 11223467788


Q ss_pred             hHhhhhhhHHHH
Q 027007          200 LERMRHSCKFLT  211 (229)
Q Consensus       200 ~~~~~~~~~~l~  211 (229)
                      |+|++.++.|+-
T Consensus       234 p~dvA~~v~~l~  245 (262)
T 1zem_A          234 INEIPGVVAFLL  245 (262)
T ss_dssp             GGGSHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence            999988887764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.6e-28  Score=199.85  Aligned_cols=196  Identities=17%  Similarity=0.159  Sum_probs=142.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CC---CeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EG---ALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~---~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    .. ..   .+.++++|++|++++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (280)
T 1xkq_A            8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   87 (280)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999986543221    11 11   57889999999999877765       68


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecC-CCcccCCCCcc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGST-DGYIADENQVH  133 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~-~~~~~~~~~~~  133 (229)
                      |+||||||....          +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+. +.         
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  158 (280)
T 1xkq_A           88 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD---------  158 (280)
T ss_dssp             CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS---------
T ss_pred             CEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCc---------
Confidence            999999996422          1234678899999999999999987641  1699999998776543 21         


Q ss_pred             ccccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch---hH---HHHHHh--hcccceeeeehhhH
Q 027007          134 EEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT---GN---LVAKLQ--WKKVDLVKDIFLLE  201 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~---~~---~~~~~~--~~~~~~~~~~~~~~  201 (229)
                           ...|+.+|...+.+    +.++.++|+++++|+||++++|.....   ..   ......  .....+.+++..|+
T Consensus       159 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe  233 (280)
T 1xkq_A          159 -----FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  233 (280)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH
Confidence                 24599999955555    455556799999999999999863211   00   001111  11122346778899


Q ss_pred             hhhhhhHHHH
Q 027007          202 RMRHSCKFLT  211 (229)
Q Consensus       202 ~~~~~~~~l~  211 (229)
                      |++.+..|+-
T Consensus       234 dvA~~v~~l~  243 (280)
T 1xkq_A          234 HIANIILFLA  243 (280)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9988877764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=1.8e-27  Score=192.42  Aligned_cols=189  Identities=22%  Similarity=0.208  Sum_probs=140.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+..+..      ..+++|++|.+++.++++       ++|+||||||
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~------~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg  103 (266)
T 3uxy_A           30 VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG  103 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS------EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh------hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            689999999999999999999999999999987654432      345789999988866654       6899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.|
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  169 (266)
T 3uxy_A          104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG--------------HALYCLT  169 (266)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT--------------BHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--------------ChHHHHH
Confidence            7432      334677889999999999999996543   2469999999877654332              2459999


Q ss_pred             HHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchh-------HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTG-------NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |...+.    ++.+++++|+++++|+||.+++|......       ..... ......+.++++.++|++.++.|+-
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVA-ELGRTVPLGRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHH-HHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHH-HHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            995554    45556667999999999999998531110       00001 1122334567888999888877654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.95  E-value=5.6e-28  Score=191.16  Aligned_cols=187  Identities=17%  Similarity=0.103  Sum_probs=132.5

Q ss_pred             CE-EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcCC----ccEEEEeC
Q 027007            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACFG----CHVIFHTA   73 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~----~d~vi~~a   73 (229)
                      || +|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++.+|++|.+++.++++.    .|+|||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            65 8999999999999999999999999999998654332111  13678899999999999888765    49999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC--ceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      |....      +.+++++.+++|+.++.++++++.+.+..  .+||++||..++.+.+.              ...|+.|
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~as  146 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ--------------ESTYCAV  146 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC--------------CchhHHH
Confidence            97422      23457788999999999999999886422  38999999887654332              2459999


Q ss_pred             HHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |+..+.+.+.    +.++|+++++++||.+.++......         ...+..++..+++++.++.|+
T Consensus       147 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~dvA~~i~~l  206 (230)
T 3guy_A          147 KWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG---------KSLDTSSFMSAEDAALMIHGA  206 (230)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC---------CCCCcccCCCHHHHHHHHHHH
Confidence            9966655554    4456999999999999998642211         111245677788887766554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.95  E-value=1.8e-27  Score=195.40  Aligned_cols=195  Identities=17%  Similarity=0.133  Sum_probs=143.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC------------C----C-CCCCCeEEEEccCCChhhHHhhcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------------G----L-PSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~------------~----~-~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      ++|||||+++||++++++|+++|++|++++|+.+...            .    + .....+.++++|++|.+++.++++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  109 (299)
T 3t7c_A           30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD  109 (299)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            6899999999999999999999999999999743110            0    0 011368899999999999877765


Q ss_pred             -------CccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcc
Q 027007           65 -------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~  126 (229)
                             ++|+||||||....       +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.  
T Consensus       110 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--  187 (299)
T 3t7c_A          110 DGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN--  187 (299)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC--
Confidence                   68999999997422       224577899999999999999987753    2469999999887654332  


Q ss_pred             cCCCCccccccccCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchhHH---------------HHHHh
Q 027007          127 ADENQVHEEKYFCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNL---------------VAKLQ  187 (229)
Q Consensus       127 ~~~~~~~~~~~~~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~---------------~~~~~  187 (229)
                                  ...|+.||+.    ++.++.+++++||++++|+||.+.+|........               .....
T Consensus       188 ------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (299)
T 3t7c_A          188 ------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR  255 (299)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh
Confidence                        2459999994    5555666667799999999999999975321110               00000


Q ss_pred             hcccceeeeehhhHhhhhhhHHHH
Q 027007          188 WKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .....+ .+++.|+|++.++.||-
T Consensus       256 ~~~~~p-~r~~~pedvA~~v~fL~  278 (299)
T 3t7c_A          256 QMHVLP-IPYVEPADISNAILFLV  278 (299)
T ss_dssp             HHSSSS-CSCBCHHHHHHHHHHHH
T ss_pred             hhcccC-cCCCCHHHHHHHHHHHh
Confidence            111222 56788999998887765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=3.8e-28  Score=196.08  Aligned_cols=193  Identities=14%  Similarity=0.144  Sum_probs=140.6

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+  |+||++++++|+++|++|++++|+. +.++    +.. .+...++++|++|++++.++++       ++|
T Consensus        11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   89 (265)
T 1qsg_A           11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD   89 (265)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999  9999999999999999999999986 2111    100 0234688999999999877765       689


Q ss_pred             EEEEeCcccC-----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           68 VIFHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        68 ~vi~~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      +||||||...           .+.++|++.+++|+.++.++++++.+.+. .++||++||..++.+.+.           
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  158 (265)
T 1qsg_A           90 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN-----------  158 (265)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             EEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC-----------
Confidence            9999999743           22345778899999999999999998753 259999999876643221           


Q ss_pred             ccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                         ...|+.||...+.+.+.    +.++|+++++|+||++++|......   .+.....  ...+.+++..++|++.++.
T Consensus       159 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~dva~~v~  233 (265)
T 1qsg_A          159 ---YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCE--AVTPIRRTVTIEDVGNSAA  233 (265)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHH--HHSTTSSCCCHHHHHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHH--hcCCCCCCCCHHHHHHHHH
Confidence               24599999966666554    4456999999999999999753211   1111111  1123456778888888776


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       234 ~l~  236 (265)
T 1qsg_A          234 FLC  236 (265)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2e-28  Score=200.93  Aligned_cols=196  Identities=19%  Similarity=0.182  Sum_probs=142.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C-CC---CeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EG---ALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~---~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.    . ..   .+.++++|++|++++.++++       ++
T Consensus        28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  107 (297)
T 1xhl_A           28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI  107 (297)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6999999999999999999999999999999865432211    0 11   57889999999999887765       68


Q ss_pred             cEEEEeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecC-CCcccCCCCcccc
Q 027007           67 HVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGST-DGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~-~~~~~~~~~~~~~  135 (229)
                      |+||||||....        +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+. +.           
T Consensus       108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-----------  176 (297)
T 1xhl_A          108 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG-----------  176 (297)
T ss_dssp             CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT-----------
T ss_pred             CEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCC-----------
Confidence            999999996322        2235778899999999999999987641  2699999998776543 21           


Q ss_pred             ccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch---hH---HHHHHh--hcccceeeeehhhHhh
Q 027007          136 KYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT---GN---LVAKLQ--WKKVDLVKDIFLLERM  203 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~---~~---~~~~~~--~~~~~~~~~~~~~~~~  203 (229)
                         ...|+.+|...+.+    +.+++++|+++++|+||.+.+|.....   ..   ......  .....+.+++..|+|+
T Consensus       177 ---~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  253 (297)
T 1xhl_A          177 ---YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI  253 (297)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHH
Confidence               24599999965554    455556799999999999999853211   00   000111  1112234567889999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.|+-
T Consensus       254 A~~v~~l~  261 (297)
T 1xhl_A          254 ANIIVFLA  261 (297)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88877764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=3.4e-28  Score=195.86  Aligned_cols=194  Identities=23%  Similarity=0.182  Sum_probs=135.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCC--------CCCeEEEEccCCChhhHHhhcCC----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--------EGALELVYGDVTDYRSLVDACFG----   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~--------~~~~~~~~~D~~~~~~~~~~~~~----   65 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +..        ...+.++++|++|.+++.++++.    
T Consensus         9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (264)
T 2pd6_A            9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQAC   88 (264)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999997543211    111        13578899999999998777654    


Q ss_pred             ---c-cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCC
Q 027007           66 ---C-HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        66 ---~-d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                         + |+||||||....      +.+++++.+++|+.++.++++++.+.+   + .++||++||..++.+.+.       
T Consensus        89 ~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  161 (264)
T 2pd6_A           89 FSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG-------  161 (264)
T ss_dssp             HSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT-------
T ss_pred             hCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC-------
Confidence               4 999999997432      234577889999999999999998763   1 369999999876543321       


Q ss_pred             ccccccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          132 VHEEKYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                             ...|+.+|...+.+.+    ++.++|+++++++||.++||............... ..+..++..+++++.+.
T Consensus       162 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~  233 (264)
T 2pd6_A          162 -------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITE-MIPMGHLGDPEDVADVV  233 (264)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGG-GCTTCSCBCHHHHHHHH
T ss_pred             -------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHH-hCCCCCCCCHHHHHHHH
Confidence                   2459999996665554    44557999999999999999753211111111111 12234556677777665


Q ss_pred             HHH
Q 027007          208 KFL  210 (229)
Q Consensus       208 ~~l  210 (229)
                      .|+
T Consensus       234 ~~l  236 (264)
T 2pd6_A          234 AFL  236 (264)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=8.3e-28  Score=196.93  Aligned_cols=196  Identities=13%  Similarity=0.095  Sum_probs=142.1

Q ss_pred             EEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCCCCCC---CCC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDIS---GLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~--iG~~l~~~l~~~g~~V~~~~r~~~~~~---~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+  ||++++++|+++|++|++++|+....+   .+. ....+.++++|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (293)
T 3grk_A           33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDF  112 (293)
T ss_dssp             EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899999977  999999999999999999999742111   110 11357889999999999877765       6899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||...          .+.++|++.+++|+.+++++++++.+.+. .++||++||..++.+.+.             
T Consensus       113 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------  179 (293)
T 3grk_A          113 LVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN-------------  179 (293)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc-------------
Confidence            999999742          12346778899999999999999998763 359999999887654332             


Q ss_pred             ccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ...|+.||+..    +.++.+++++|+++++|+||.+.++......  ...... .....+.++++.++|++.++.||-
T Consensus       180 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~p~~r~~~pedvA~~v~~L~  257 (293)
T 3grk_A          180 -YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKW-NEYNAPLRRTVTIDEVGDVGLYFL  257 (293)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHH-HHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHH-HHhcCCCCCCCCHHHHHHHHHHHc
Confidence             24599999944    4555666677999999999999998643221  111111 122234567888999988887764


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       258 s  258 (293)
T 3grk_A          258 S  258 (293)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=6e-28  Score=192.28  Aligned_cols=194  Identities=23%  Similarity=0.243  Sum_probs=141.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+.. ..+++++.+|++|.+++.++++   ++|+||||||..
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~   87 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   87 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCccc
Confidence            479999999999999999999999999999997643322110 1246778999999999998876   489999999964


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ..      +.+++++.+++|+.++.++++++.+.+   + .++||++||..++.+.+.              ...|+.+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK  153 (244)
T 1cyd_A           88 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------LITYSSTK  153 (244)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC--------------cchhHHHH
Confidence            21      224567789999999999999987753   2 469999999887754322              24599999


Q ss_pred             HHHHHHHHHHH----hcCCCeEEEecCceecCCCCc---hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       147 ~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...+.+++.++    .+|+++++++||.++||....   ...+.......  .+.+++..++|++.+..++
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l  222 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER--HPLRKFAEVEDVVNSILFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH--STTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc--CCccCCCCHHHHHHHHHHH
Confidence            97777766554    468999999999999985321   11222222211  2235667787777665544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=8.5e-28  Score=192.76  Aligned_cols=194  Identities=15%  Similarity=0.146  Sum_probs=141.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++|+ +++.+.+.     ....++++++|++|++++.++++       ++|
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999999999999999999999999998 55433211     02367889999999999988776       799


Q ss_pred             EEEEeCcc-cCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----C---ceEEEEccceeee-cCCCcccCCCC
Q 027007           68 VIFHTAAL-VEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----V---EKIIYTSSFFALG-STDGYIADENQ  131 (229)
Q Consensus        68 ~vi~~a~~-~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~---~~iv~~sS~~~~~-~~~~~~~~~~~  131 (229)
                      +||||||. ...      +.+++++.+++|+.++.++++++.+.+.     .   ++||++||..++. +.+.       
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  160 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG-------  160 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT-------
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC-------
Confidence            99999996 221      1234667899999999999998865421     1   6999999987764 2211       


Q ss_pred             ccccccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhh
Q 027007          132 VHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                             ...|+.+|...+.+.+.+    .++|+++++++||.++||..... ..+..... . ..+.+++..++|++.+
T Consensus       161 -------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dva~~  231 (258)
T 3afn_B          161 -------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRIS-N-GIPMGRFGTAEEMAPA  231 (258)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHH-T-TCTTCSCBCGGGTHHH
T ss_pred             -------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHh-c-cCCCCcCCCHHHHHHH
Confidence                   245999999777766554    45599999999999999865332 22222221 1 2234567778888776


Q ss_pred             hHHH
Q 027007          207 CKFL  210 (229)
Q Consensus       207 ~~~l  210 (229)
                      ..|+
T Consensus       232 ~~~l  235 (258)
T 3afn_B          232 FLFF  235 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=1.3e-28  Score=197.71  Aligned_cols=195  Identities=14%  Similarity=0.087  Sum_probs=139.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+|||
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   85 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN   85 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            469999999999999999999999999999998643322111  1257889999999999887765       7999999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.              ...|
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  151 (254)
T 1hdc_A           86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL--------------TSSY  151 (254)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC--------------chhH
Confidence            9997432      224577889999999998888876643   2469999999877654322              2459


Q ss_pred             HHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeeh-hhHhhhhhhHHH
Q 027007          143 ERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIF-LLERMRHSCKFL  210 (229)
Q Consensus       143 ~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  210 (229)
                      +.+|...+.+    +.++.++|+++++|+||.+++|............. ....+..++. .++|++.++.|+
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~p~~~~~~~~~dvA~~v~~l  223 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKL  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHH-HhcCCCCCCCCCHHHHHHHHHHH
Confidence            9999955554    45555679999999999999985211000000000 1111234566 788888777665

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-27  Score=193.29  Aligned_cols=194  Identities=18%  Similarity=0.120  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.      ....+.++++|++|.+++.++++       ++|+
T Consensus        23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (267)
T 1vl8_A           23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT  102 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999864332110      01357889999999999877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccce-eeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~-~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||.. +..+.+.              
T Consensus       103 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------------  168 (267)
T 1vl8_A          103 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------------  168 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC--------------
Confidence            9999997432      223567889999999999999987653   246999999986 4432211              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|...+.+.    .++.++|+++++|+||.+.++.....   ...... ... ..+.+++..+++++.++.|+-
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~-~~p~~~~~~p~dvA~~v~~l~  246 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY-MLK-RIPLGRTGVPEDLKGVAVFLA  246 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHH-HHH-TCTTSSCBCGGGGHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHH-HHh-hCCCCCCcCHHHHHHHHHHHc
Confidence            245999999665554    45556799999999999999864211   111111 111 123456778888888776653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=5.7e-28  Score=193.39  Aligned_cols=197  Identities=18%  Similarity=0.172  Sum_probs=135.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++.+|++|.+++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            689999999999999999999999999999998654322111  1267889999999999988765       5899999


Q ss_pred             eCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           72 TAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        72 ~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||...       .+.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ...
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~  146 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------GNV  146 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC--------------Cch
Confidence            999642       1224577889999999999999997643   2469999999877644322              245


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCcee-cCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIY-GPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      |+.||...+.+.+.    ++++|+++++|+||.+. +|................. .......|+|++.++.|+-.
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~-~~~~~~~p~dvA~~v~~l~s  221 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY-QNTVALTPEDVSEAVWWVST  221 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------CCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH-hccCCCCHHHHHHHHHHHhc
Confidence            99999966665554    44569999999999999 6753211000000000000 01123578888877766543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=3e-28  Score=196.14  Aligned_cols=196  Identities=16%  Similarity=0.133  Sum_probs=134.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+++..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   90 (261)
T 3n74_A           11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNN   90 (261)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999999999999998654332211  1368899999999999877765       68999999


Q ss_pred             CcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-------CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-------VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||....       +.+++++.+++|+.++.++++++.+.+.       ..+||++||..++.+.+.              
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  156 (261)
T 3n74_A           91 AGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN--------------  156 (261)
T ss_dssp             CCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT--------------
T ss_pred             CccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC--------------
Confidence            997431       2245677899999999999999877642       236999999876644332              


Q ss_pred             cCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHH-HHH--HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNL-VAK--LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|+..+    .+++++.++|+++++++||.+.+|........ ...  .......+.+++..++|++.++.|+-
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (261)
T 3n74_A          157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC  236 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHc
Confidence            234999999555    45555666799999999999999864321100 000  11112223456778888887776653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=1.5e-27  Score=192.53  Aligned_cols=196  Identities=18%  Similarity=0.129  Sum_probs=138.7

Q ss_pred             EEEEEcCCC-hHHHHHHHHHHHCCCeEEEEEcCCCCCCC----C--CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISG----L--PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~--~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+| +||++++++|+++|++|++++|+.++.+.    +  .....++++++|++|.+++.++++       ++|
T Consensus        24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  103 (266)
T 3o38_A           24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLD  103 (266)
T ss_dssp             EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCc
Confidence            689999987 79999999999999999999998653221    1  111378999999999999877765       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+    ..++||++||..++.+.+.             
T Consensus       104 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  170 (266)
T 3o38_A          104 VLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS-------------  170 (266)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-------------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-------------
Confidence            99999997432      234577889999999999999998763    2458999999877654322             


Q ss_pred             ccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ...|+.+|++.+.++    .++.++|+++++|+||.+.++..................+.+++..++|++.++.|+-
T Consensus       171 -~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~  247 (266)
T 3o38_A          171 -QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLA  247 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence             245999999665555    4555679999999999999986432211111111122233466778888887776653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=2.8e-28  Score=195.01  Aligned_cols=196  Identities=14%  Similarity=0.137  Sum_probs=140.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.    +.....++++++|++|.+++.++++       ++|+|
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999997643221    1111368899999999999887765       48999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CC-ceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....      +.+++++.+++|+.++.++++.+.+.+   +. ++||++||..++.+.+.              .
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  152 (251)
T 1zk4_A           87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------------L  152 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------------C
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--------------C
Confidence            999997422      223467789999999999998887643   23 69999999877654322              2


Q ss_pred             CcHHHHHHHHHHHHHH----HH--hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQ----AA--SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~--~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+.+.    +.  ++|+++++++||++++|..................+.+++..++|++.++.|+
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            4599999977666554    44  56899999999999998532211111111112222345677788888776665

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.94  E-value=9.2e-28  Score=192.82  Aligned_cols=196  Identities=14%  Similarity=0.125  Sum_probs=142.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCC-CCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.+.  .+.+. ....+.++++|++|++++.++++       ++|+||
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   84 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILV   84 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            369999999999999999999999999999997641  00111 12357889999999999988876       799999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ...
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  150 (255)
T 2q2v_A           85 NNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG--------------KAA  150 (255)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------BHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC--------------chh
Confidence            99996422      234577889999999999999886543   2469999999877654322              245


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchh---HHH---H----HHhhcccceeeeehhhHhhhhhh
Q 027007          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG---NLV---A----KLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~---~~~---~----~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                      |+.+|...+.+.+.    +.++|+++++|+||.+++|......   ...   .    ..+.....+.+++..++|++.+.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  230 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            99999966655554    4456899999999999998632111   000   0    11102223456778888888877


Q ss_pred             HHH
Q 027007          208 KFL  210 (229)
Q Consensus       208 ~~l  210 (229)
                      .|+
T Consensus       231 ~~l  233 (255)
T 2q2v_A          231 LFL  233 (255)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=2.9e-28  Score=199.70  Aligned_cols=194  Identities=23%  Similarity=0.207  Sum_probs=143.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC--CCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--DISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~--~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+  ..+.+     .....+.++++|++|.+++.++++       ++|
T Consensus        51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999988632  11110     012367889999999998877664       689


Q ss_pred             EEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +||||||....       +.++|++.+++|+.+++++++++.+.+.. ++||++||..++.+.+.              .
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------------~  196 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--------------L  196 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT--------------C
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC--------------c
Confidence            99999997321       23457789999999999999999988632 49999999988765432              2


Q ss_pred             CcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCc---hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||+..+    .++.+++++|+++++|+||.+++|....   ......  ......+.++++.++|++.++.||-
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~p~~r~~~p~dvA~~v~~L~  273 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP--QFGQQTPMKRAGQPAELAPVYVYLA  273 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST--TTTTTSTTSSCBCGGGGHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH--HHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            44999999554    5555666779999999999999985211   111111  1122334567888999888877764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=8.8e-28  Score=193.07  Aligned_cols=194  Identities=21%  Similarity=0.268  Sum_probs=138.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++ +..... .. .++++|++|.+++.++++       ++|+|||||
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A   85 (256)
T 2d1y_A            8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA   85 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            69999999999999999999999999999998754 221110 13 788999999998877664       689999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  151 (256)
T 2d1y_A           86 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------------NAAYNA  151 (256)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT--------------BHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC--------------ChhHHH
Confidence            97422      223567889999999999999987753   2469999999876543321              245999


Q ss_pred             HHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh--HH-HHH--HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG--NL-VAK--LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ||...+.+.    .++.++|+++++++||.+.++......  .. ...  .......+.+++..++|++.++.|+-
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  227 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999655554    455567999999999999987521100  00 000  00112223456778888887776653

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=1.3e-27  Score=190.17  Aligned_cols=191  Identities=17%  Similarity=0.130  Sum_probs=138.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-------CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++..+.   .++..+++|++| +++.+++       .++|+||||||
T Consensus         4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag   79 (239)
T 2ekp_A            4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS---LGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAA   79 (239)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH---HTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh---hCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999986541110   026788999999 7766554       36899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+...+            ....|+.|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------~~~~Y~~s  147 (239)
T 2ekp_A           80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPV------------PIPAYTTA  147 (239)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTS------------CCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCC------------CCccHHHH
Confidence            7421      223577889999999999999987653   24699999998877543100            12459999


Q ss_pred             HHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          146 KAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       146 K~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      |...+.+.    .++.++|+++++++||.++++.....   ...... +.. ..+.+++..++|++.+..|+
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~-~~p~~~~~~~~dvA~~~~~l  217 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEP-ITA-RIPMGRWARPEEIARVAAVL  217 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHH-HHT-TCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHH-HHh-cCCCCCCcCHHHHHHHHHHH
Confidence            99655554    45556799999999999999864211   111111 111 22345677888888777665

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=2.1e-27  Score=193.73  Aligned_cols=194  Identities=14%  Similarity=0.114  Sum_probs=140.5

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+  |+||++++++|+++|++|++++|+.+   ..+.+.. .+.+.++++|++|.+++.++++       ++|+
T Consensus        23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (285)
T 2p91_A           23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDI  102 (285)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999  99999999999999999999999763   1111110 1236788999999999877765       6899


Q ss_pred             EEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ||||||....          +.+++++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.            
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  170 (285)
T 2p91_A          103 IVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH------------  170 (285)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC------------
Confidence            9999997421          2235678899999999999999988753  369999999876543321            


Q ss_pred             cccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          137 YFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                        ...|+.||...+.+.    .+++++|+++++|+||.+++|.....   ...... .. ...+.+++..+++++.++.|
T Consensus       171 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~-~~~p~~~~~~~~dva~~~~~  246 (285)
T 2p91_A          171 --YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEH-TT-KVNPFGKPITIEDVGDTAVF  246 (285)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHH-HH-HHSTTSSCCCHHHHHHHHHH
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHH-HH-hcCCCCCCcCHHHHHHHHHH
Confidence              245999999665554    45556799999999999999975321   111111 11 11234567788888887766


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       247 l~  248 (285)
T 2p91_A          247 LC  248 (285)
T ss_dssp             HT
T ss_pred             Hc
Confidence            53

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.94  E-value=4.5e-28  Score=197.00  Aligned_cols=194  Identities=15%  Similarity=0.095  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+    . ....+.++++|++|.+++.++++       ++|+|
T Consensus        24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (277)
T 2rhc_B           24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL  103 (277)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999986433211    0 01357889999999999877765       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc--C---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--K---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.  +   +.++||++||..++.+.+.              
T Consensus       104 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------  169 (277)
T 2rhc_B          104 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--------------  169 (277)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC--------------
Confidence            999997422      22356788999999999999999876  3   2469999999876543221              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh-----------HHHHHHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG-----------NLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ...|+.+|...+.+.    .++.++|+++++|+||.+++|......           ....... ....+.+++..++|+
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~~~dv  248 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI-TARVPIGRYVQPSEV  248 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH-HHHSTTSSCBCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH-HhcCCCCCCcCHHHH
Confidence            245999999655555    445556899999999999998532110           0000111 111234567788888


Q ss_pred             hhhhHHH
Q 027007          204 RHSCKFL  210 (229)
Q Consensus       204 ~~~~~~l  210 (229)
                      +.++.|+
T Consensus       249 A~~v~~l  255 (277)
T 2rhc_B          249 AEMVAYL  255 (277)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877665

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-28  Score=197.48  Aligned_cols=196  Identities=19%  Similarity=0.219  Sum_probs=140.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+|||
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~   86 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN   86 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            469999999999999999999999999999997643322111  1367889999999998877665       4799999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC--ceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      |||....      +.++|++.+++|+.+++++++++.+.+..  ++||++||..++.+.+.              ...|+
T Consensus        87 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  152 (253)
T 1hxh_A           87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ--------------YAGYS  152 (253)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCC--------------CccHH
Confidence            9997422      22457788999999999999988765421  69999999887654322              24599


Q ss_pred             HHHHHHHHHH----HHHHhc--CCCeEEEecCceecCCCCc--hhHHHHHHhhcc--cceeeeehhhHhhhhhhHHH
Q 027007          144 RSKAVADKIA----LQAASE--GLPIVPVYPGVIYGPGKLT--TGNLVAKLQWKK--VDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~~~e~~~----~~~~~~--gi~~~~irpg~i~g~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .||...+.+.    .++.++  |+++++++||+++||....  ........+...  ..+.+++..++|++.++.|+
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHH
Confidence            9999665554    455556  9999999999999985311  000111101110  22345677888888777665

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=9.3e-28  Score=193.82  Aligned_cols=195  Identities=20%  Similarity=0.173  Sum_probs=136.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++.+|++|.+++.++++       ++|+|
T Consensus         6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   85 (264)
T 3tfo_A            6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVL   85 (264)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999865433211     12367889999999999877764       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.              ..
T Consensus        86 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------~~  151 (264)
T 3tfo_A           86 VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT--------------AA  151 (264)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC--------------Ch
Confidence            999997432      234677889999999999999987753   3469999999887754332              24


Q ss_pred             cHHHHHHHHHHHHHHHHhc--CCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          141 QYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~~--gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      .|+.||+..+.+.+.++..  |+++++|+||.+.++................  .......|+|++.++.|+-.
T Consensus       152 ~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDT--YRAIALQPADIARAVRQVIE  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------CCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHh--hhccCCCHHHHHHHHHHHhc
Confidence            5999999777777666533  8999999999999986432111000000000  01124678888888777643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=8e-28  Score=194.48  Aligned_cols=196  Identities=16%  Similarity=0.261  Sum_probs=144.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcC---CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF---GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~   71 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..       .....+..+.+|++|.+++.++++   ++|+|||
T Consensus        12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   91 (267)
T 3t4x_A           12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILIN   91 (267)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            689999999999999999999999999999986543221       111356788999999998877765   6899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|
T Consensus        92 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  157 (267)
T 3t4x_A           92 NLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE--------------MAHY  157 (267)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc--------------chHH
Confidence            9997432      234577789999999999999987753   3469999999887754332              2459


Q ss_pred             HHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCc------------hhHHHHHHhhc--ccceeeeehhhHhhh
Q 027007          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT------------TGNLVAKLQWK--KVDLVKDIFLLERMR  204 (229)
Q Consensus       143 ~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~~~~  204 (229)
                      +.||...+.+.+.    ++++|+++++|+||.+.+|....            ...........  ...+.++++.|+|++
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA  237 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA  237 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHH
Confidence            9999966655554    44568999999999999874211            01111111111  223457889999999


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.||-
T Consensus       238 ~~v~fL~  244 (267)
T 3t4x_A          238 HLVTFLS  244 (267)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            8888764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.94  E-value=2.2e-28  Score=197.29  Aligned_cols=196  Identities=13%  Similarity=0.113  Sum_probs=135.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC---CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD---ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+++||++++++|+++|++|++++|....   .+.    +. ....+.++++|++|.+++.++++       ++
T Consensus        13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   92 (262)
T 3ksu_A           13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKV   92 (262)
T ss_dssp             EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999875321   111    11 12368889999999999887765       68


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |+||||||....      +.++|++.+++|+.++.++++++.+.++ .++||++||..++.+.+.              .
T Consensus        93 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~  158 (262)
T 3ksu_A           93 DIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--------------Y  158 (262)
T ss_dssp             EEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC--------------C
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC--------------C
Confidence            999999997422      2345778899999999999999998752 359999999877654332              2


Q ss_pred             CcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||+..+.+    +.+++++|+++++|+||.+.++..................+.+++..|+|++.++.|+.
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  234 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT  234 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHc
Confidence            3499999855544    45555679999999999998874211110001111222334567888999998888774

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=1.1e-27  Score=193.06  Aligned_cols=197  Identities=18%  Similarity=0.135  Sum_probs=138.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC----C-CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----G-LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~----~-~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.....    + .. ....+.++++|++|.+++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A            9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999988753211    0 11 01368899999999999888775       6899


Q ss_pred             EEEeCcc--cC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAAL--VE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~--~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||.  ..      .+.+++++.+++|+.++.++++++.+.+   ..++||++||.......+.+            
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~------------  156 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI------------  156 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCT------------
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCC------------
Confidence            9999994  21      1224567889999999999999996543   24699999987443221111            


Q ss_pred             ccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ....|+.+|+..+.    ++.++.++|+++++++||.+++|........... ......+.+++..++|++.++.|+-
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~p~~r~~~~~dva~~v~~l~  233 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQ-LKEHNTPIGRSGTGEDIARTISFLC  233 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHH-C--------CCCCHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHH-HHhhcCCCCCCcCHHHHHHHHHHHc
Confidence            12459999995554    4555556799999999999999975443322221 2223345567788888888776653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=6.8e-28  Score=191.98  Aligned_cols=196  Identities=20%  Similarity=0.170  Sum_probs=140.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|+++ +|+.++.+.+.     ....+.++++|++|++++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999985 67643322110     01357889999999999888775       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  147 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--------------  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC--------------
Confidence            99999997432      223567789999999999999998753   3469999999876543321              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|...+.+.    .++.++|+++++++||++++|............... ..+.+++..++|++.+..|+-
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~  223 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILG-TIPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHT-SCTTCSCBCHHHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhh-cCCCCCCCCHHHHHHHHHHHh
Confidence            245999999555544    455556999999999999998532211111111222 223456778888887766653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=3.7e-27  Score=188.05  Aligned_cols=195  Identities=17%  Similarity=0.152  Sum_probs=130.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|+++ .|++++.+.+    . ....+.++++|++|++++.++++       ++|
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            369999999999999999999999999999 4554332211    0 12368899999999999887765       789


Q ss_pred             EEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||...      .+.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  151 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------------  151 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------
Confidence            9999999742      2345788999999999999999987642   2469999999855432211              


Q ss_pred             cCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+.+.    +..+|+++++++||.+.++............... ..+..++..++|++.+..|+
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l  226 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLN-NIPLKRFGTPEEVANVVGFL  226 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHT-TSTTSSCBCHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHh-hCCCCCCCCHHHHHHHHHHH
Confidence            24599999966655544    4556999999999999987432111111111111 12335667788877665543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=1.3e-27  Score=190.67  Aligned_cols=194  Identities=18%  Similarity=0.130  Sum_probs=139.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.      ....+.++.+|++|.+++.++++       ++|+
T Consensus         9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   88 (248)
T 2pnf_A            9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI   88 (248)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899999999999999999999999999999764332211      01367889999999999988775       7999


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              .
T Consensus        89 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  154 (248)
T 2pnf_A           89 LVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG--------------Q  154 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC--------------C
Confidence            9999997432      223567789999999999988876542   2469999999866543221              2


Q ss_pred             CcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.+|...+.+.+.    +..+|+++++++||.+++|................ .+..++..+++++.++.|+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQ-IPLGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT-CTTSSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhc-CCCCCccCHHHHHHHHHHH
Confidence            3599999966655544    44568999999999999986432222111112111 1234566777777666554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=1.4e-27  Score=190.95  Aligned_cols=166  Identities=17%  Similarity=0.164  Sum_probs=127.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC----CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~~   76 (229)
                      ++||||||+||||++++++|+++|++|++++|++++.+.        .+++|++|.+++.++++    ++|+||||||..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            269999999999999999999999999999998754332        15789999999988876    799999999975


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcc-cC-------CCCcc----ccccccCc
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYI-AD-------ENQVH----EEKYFCTQ  141 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~-~~-------~~~~~----~~~~~~~~  141 (229)
                      .. ..++++.+++|+.++.++++++.+.+   ..++||++||..++++..... .+       +..+.    ....+...
T Consensus        74 ~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           74 VT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             TT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             Cc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            42 35688999999999999999987752   246999999998886532110 00       00000    00012356


Q ss_pred             HHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      |+.+|...+.+++.++    ++|++++++|||.++||.
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~  190 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL  190 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence            9999998887776654    469999999999999985

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.94  E-value=1.2e-27  Score=192.36  Aligned_cols=194  Identities=20%  Similarity=0.176  Sum_probs=139.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++| +.++.+.+    . ....+.++++|++|.+++.++++       ++|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            37999999999999999999999999999999 54322211    0 01357889999999999887765       789


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+   . .++||++||..++.+.+.             
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  154 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL-------------  154 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC-------------
Confidence            99999997432      223567789999999999999987653   2 469999999876543221             


Q ss_pred             ccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.+|...+.    ++.++.++|+++++++||.+++|.....   ...... +.. ..+.+++..+++++.++.|+
T Consensus       155 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~dva~~~~~l  231 (261)
T 1gee_A          155 -FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD-VES-MIPMGYIGEPEEIAAVAAWL  231 (261)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHH-HHT-TCTTSSCBCHHHHHHHHHHH
T ss_pred             -ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHH-HHh-cCCCCCCcCHHHHHHHHHHH
Confidence             2459999975554    4555556799999999999999964221   111111 111 22335667788888776665

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1e-27  Score=192.48  Aligned_cols=195  Identities=17%  Similarity=0.204  Sum_probs=143.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|  +.|++.+|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||
T Consensus         4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   83 (254)
T 3kzv_A            4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLV   83 (254)
T ss_dssp             EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEE
Confidence            68999999999999999999985  789999997654332211  1367899999999999877765       689999


Q ss_pred             EeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||....       +.++|++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.              ...
T Consensus        84 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~--------------~~~  149 (254)
T 3kzv_A           84 ANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSS--------------WGA  149 (254)
T ss_dssp             EECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCC--------------SHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCC--------------cch
Confidence            99997322       2245778899999999999999976531  269999999887754332              245


Q ss_pred             HHHHHHHHHHHHHHHHh--cCCCeEEEecCceecCCCCch----------hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          142 YERSKAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLTT----------GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       142 Y~~sK~~~e~~~~~~~~--~gi~~~~irpg~i~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      |+.||...+.+.+.++.  +|+++++|+||.+.+|.....          .....  ......+.++++.++|++.++.|
T Consensus       150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK--MFRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHH--HHHHHHTTC----CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHH--HHHHHHhcCCcCCcccHHHHHHH
Confidence            99999988888777663  389999999999999865321          11111  12223345788899999988888


Q ss_pred             HHH
Q 027007          210 LTW  212 (229)
Q Consensus       210 l~~  212 (229)
                      |-.
T Consensus       228 L~s  230 (254)
T 3kzv_A          228 LAL  230 (254)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.94  E-value=1.3e-26  Score=203.27  Aligned_cols=172  Identities=26%  Similarity=0.358  Sum_probs=133.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC---CC--------------CCCCCeEEEEccCCChhhHHhhc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GL--------------PSEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~---~~--------------~~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      |+|||||||||||++++++|.++|++|++++|+..+..   .+              ....+++++.+|++|++++. +.
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  229 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  229 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CS
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Cc
Confidence            57999999999999999999999999999999875210   00              01137899999999988887 77


Q ss_pred             CCccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecC-----CCcccCCCCccccccc
Q 027007           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~~~~~~~~~~~~  138 (229)
                      .++|+|||+|+.... ..++...+++|+.++.+++++|.+  ..+++||+||.++ |..     ...+.+|..+.....+
T Consensus       230 ~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          230 ENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             SCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             cCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence            889999999997642 345678899999999999999988  3579999999988 321     1233444444322335


Q ss_pred             cCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                      .+.|+.+|..+|.+++.+.+.|++++++|||.+|||...
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~  344 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG  344 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSS
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCC
Confidence            678999999999999998878999999999999999753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=2.7e-27  Score=193.39  Aligned_cols=194  Identities=16%  Similarity=0.155  Sum_probs=141.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCC------CCCCCeEEEEccCCC----hhhHHhhcC-----
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL------PSEGALELVYGDVTD----YRSLVDACF-----   64 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~------~~~~~~~~~~~D~~~----~~~~~~~~~-----   64 (229)
                      +++|||||+|+||++++++|+++|++|++++|+. ++.+.+      .....+.++++|++|    .+++.++++     
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999986 432211      112367889999999    888877664     


Q ss_pred             --CccEEEEeCcccCC----------------CCCCchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccce
Q 027007           65 --GCHVIFHTAALVEP----------------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFF  117 (229)
Q Consensus        65 --~~d~vi~~a~~~~~----------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~  117 (229)
                        ++|+||||||....                +.+++++.+++|+.+++++++++.+.+.         .++||++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              68999999997421                1123567899999999999999987652         35899999987


Q ss_pred             eeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccce
Q 027007          118 ALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDL  193 (229)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~  193 (229)
                      ++.+.+.              ...|+.||+    +++.++.++.++|+++++|+||.+++|. ........... . ..+
T Consensus       184 ~~~~~~~--------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~-~-~~p  246 (288)
T 2x9g_A          184 VDQPCMA--------------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWR-R-KVP  246 (288)
T ss_dssp             TTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHH-H-TCT
T ss_pred             ccCCCCC--------------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHH-h-hCC
Confidence            7654322              245999998    5555566666779999999999999997 22122222211 1 123


Q ss_pred             eeee-hhhHhhhhhhHHHH
Q 027007          194 VKDI-FLLERMRHSCKFLT  211 (229)
Q Consensus       194 ~~~~-~~~~~~~~~~~~l~  211 (229)
                      .+++ ..+++++.++.|+-
T Consensus       247 ~~r~~~~pedvA~~v~~l~  265 (288)
T 2x9g_A          247 LGRREASAEQIADAVIFLV  265 (288)
T ss_dssp             TTSSCCCHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHh
Confidence            3556 78888888877764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.94  E-value=8.2e-28  Score=195.37  Aligned_cols=195  Identities=17%  Similarity=0.126  Sum_probs=141.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-------------C----C-CCCCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------G----L-PSEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~----~-~~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.....             .    + .....+.++++|++|.+++.+++
T Consensus        13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (277)
T 3tsc_A           13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVV   92 (277)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            5899999999999999999999999999998532110             0    0 01246888999999999987776


Q ss_pred             C-------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcc
Q 027007           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~  126 (229)
                      +       ++|+||||||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.  
T Consensus        93 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  170 (277)
T 3tsc_A           93 DDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF--  170 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC--
Confidence            4       58999999997432      334677889999999999999987753    2358999999887654332  


Q ss_pred             cCCCCccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHH-----h---hcccc
Q 027007          127 ADENQVHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKL-----Q---WKKVD  192 (229)
Q Consensus       127 ~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~-----~---~~~~~  192 (229)
                                  ...|+.||+..    +.++.+++++|+++++|+||.+.+|......  ......     .   .....
T Consensus       171 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3tsc_A          171 ------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL  238 (277)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSS
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhcc
Confidence                        24599999844    5555666677999999999999999743210  000000     0   01111


Q ss_pred             eeeeehhhHhhhhhhHHHH
Q 027007          193 LVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       193 ~~~~~~~~~~~~~~~~~l~  211 (229)
                      + .++..|+|++.++.||-
T Consensus       239 p-~r~~~pedvA~~v~~L~  256 (277)
T 3tsc_A          239 P-DWVAEPEDIADTVCWLA  256 (277)
T ss_dssp             S-CSCBCHHHHHHHHHHHH
T ss_pred             C-CCCCCHHHHHHHHHHHh
Confidence            2 25778888888877764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=1.8e-27  Score=193.13  Aligned_cols=194  Identities=12%  Similarity=0.059  Sum_probs=141.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCC---CCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+  |+||++++++|+++|++|++++|+.+.   .+.+.. .+.+.++++|++|++++.++++       ++|+
T Consensus         8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   87 (275)
T 2pd4_A            8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDF   87 (275)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999  999999999999999999999998641   111111 1236789999999999877765       6899


Q ss_pred             EEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ||||||....          +.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.             
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  154 (275)
T 2pd4_A           88 IVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-------------  154 (275)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC-------------
Confidence            9999997431          2235778899999999999999998752 259999999876543221             


Q ss_pred             ccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.||...+.+    +.++.++|+++++|+||.+.++......   ..... +.. ..+.++++.+++++.++.|+
T Consensus       155 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~-~~p~~~~~~p~dva~~~~~l  231 (275)
T 2pd4_A          155 -YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKW-NEI-NAPLRKNVSLEEVGNAGMYL  231 (275)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHH-HHH-HSTTSSCCCHHHHHHHHHHH
T ss_pred             -chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHH-HHh-cCCcCCCCCHHHHHHHHHHH
Confidence             24599999955554    4555567999999999999999743211   11111 111 12345677888888887776


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       232 ~  232 (275)
T 2pd4_A          232 L  232 (275)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=1.4e-27  Score=191.70  Aligned_cols=194  Identities=21%  Similarity=0.201  Sum_probs=141.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++++ +.++....     .....+.++++|++|.+++.++++       ++|+
T Consensus        15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899999999999999999999999999884 43332111     011367889999999998877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              .
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  160 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG--------------Q  160 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC--------------C
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC--------------C
Confidence            9999997432      224577899999999999999987643   2469999999877654332              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.||.    +++.+++++.++|+++++++||.+.++..... .........  ..+.+++..++|++.++.|+-
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~  235 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVA--TIPVRRLGSPDEIGSIVAWLA  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHH--HSTTSSCBCHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHh
Confidence            45999999    44555566667799999999999999854222 222222221  223466778888888776654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=5.5e-27  Score=191.07  Aligned_cols=197  Identities=17%  Similarity=0.155  Sum_probs=142.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++ .+.    +. ....+.++.+|++|.+++.++++       ++|+
T Consensus        31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999997542 111    11 11367889999999998877654       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ||||||....      +.++|++.+++|+.+++++++++.+.+ ..++||++||..++.+...             ....
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~  177 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-------------KHAV  177 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-------------SCHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-------------CCcc
Confidence            9999997432      234577889999999999999999874 2469999999876543211             0245


Q ss_pred             HHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch------------hHHHHHHhhcccceeeeehhhHhhhh
Q 027007          142 YERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT------------GNLVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       142 Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                      |+.||...+.+    +.+++++|+++++|+||.+.++.....            .............+.++++.++|++.
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  257 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHH
Confidence            99999855554    455556799999999999999852110            11111111100234567788999888


Q ss_pred             hhHHHH
Q 027007          206 SCKFLT  211 (229)
Q Consensus       206 ~~~~l~  211 (229)
                      ++.|+-
T Consensus       258 ~v~~l~  263 (283)
T 1g0o_A          258 VVCFLA  263 (283)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            877764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=7.7e-28  Score=194.99  Aligned_cols=194  Identities=21%  Similarity=0.240  Sum_probs=133.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCCCCCCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++. |+.+..+.+     .....+.++++|++|.+++.++++       ++|+
T Consensus        28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            589999999999999999999999998874 443322211     012368899999999999877765       6899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC------CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      ||||||....       +.+++++.+++|+.++.++++++.+.+      ..++||++||..++.+....          
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  177 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ----------  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT----------
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC----------
Confidence            9999997432       234577889999999999999987763      23589999998776543211          


Q ss_pred             ccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          136 KYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                         ...|+.||+..+.+    ++++.++|+++++|+||.+++|.....  ......  .....+..+.+.++|++.++.|
T Consensus       178 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          178 ---YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE--MAPSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHH--HhhcCCcCCCcCHHHHHHHHHH
Confidence               13499999966655    455556699999999999999964321  111111  1112234556678888877666


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       253 l  253 (272)
T 4e3z_A          253 L  253 (272)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=1.7e-27  Score=192.08  Aligned_cols=187  Identities=17%  Similarity=0.146  Sum_probs=134.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  110 (262)
T 3rkr_A           31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVL  110 (262)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999999865433211     12367889999999999877664       58999


Q ss_pred             EEeCcccC-------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||...       .+.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              .
T Consensus       111 v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (262)
T 3rkr_A          111 VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD--------------G  176 (262)
T ss_dssp             EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT--------------C
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC--------------C
Confidence            99999721       1234577889999999999999987642   3469999999887654332              2


Q ss_pred             CcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|+..+.+    +.++.++|+++++++||.+.++.......         .....+...++|++.++.|+-
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~p~dvA~~v~~l~  243 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA---------KKSALGAIEPDDIADVVALLA  243 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------CCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc---------ccccccCCCHHHHHHHHHHHh
Confidence            4599999955555    45555679999999999999986422110         112345668888888777654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=1.4e-27  Score=190.23  Aligned_cols=193  Identities=20%  Similarity=0.192  Sum_probs=140.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~   77 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.. ..+.+++++|++|.+++.++++   ++|+||||||...
T Consensus         9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~   88 (244)
T 3d3w_A            9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCC
Confidence            69999999999999999999999999999997644322110 1245778999999999998876   5899999999642


Q ss_pred             C------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      .      +.+++++.+++|+.++.++++++.+.+   . .++||++||..++.+.+.              ...|+.||.
T Consensus        89 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~  154 (244)
T 3d3w_A           89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------HSVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHHH
T ss_pred             CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC--------------CchHHHHHH
Confidence            2      223567889999999999999987752   2 469999999877654321              245999999


Q ss_pred             HHHHHHHHH----HhcCCCeEEEecCceecCCCCc---hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          148 VADKIALQA----ASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       148 ~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..+.+++.+    .++|+++++++||.++|+....   ......... . ..+.+++..++|++.+..|+
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dva~~~~~l  222 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTML-N-RIPLGKFAEVEHVVNAILFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHH-H-TCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHH-h-hCCCCCCcCHHHHHHHHHHH
Confidence            777766554    4568999999999999986321   111112211 1 12335667788877766554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.94  E-value=1.1e-27  Score=193.82  Aligned_cols=195  Identities=18%  Similarity=0.183  Sum_probs=140.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++++.. ..+.    + .....+.++++|++|.+++.++++       ++|+
T Consensus        27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999985432 1111    0 112368899999999999877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.              .
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  172 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG--------------Q  172 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------B
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC--------------c
Confidence            9999997422      224577889999999999999987643   2469999999877654332              2


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.||+    +++.+++++.++|+++++++||.+.++..................+.+++..++|++.++.|+
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L  247 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFL  247 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHH
Confidence            45999999    455555666677999999999999999754332211111112223345667788888776654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=5.2e-27  Score=181.80  Aligned_cols=170  Identities=18%  Similarity=0.101  Sum_probs=132.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC---ccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~a~~~~   77 (229)
                      |++|||||+|+||++++++|+ +|++|++++|+.+            .+++|++|++++.+++++   +|+|||+||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            799999999999999999999 9999999999753            368999999999888764   899999999642


Q ss_pred             C------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      .      +.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.              ...|+.+|...+
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~~~~  136 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ--------------GASAAMANGAVT  136 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT--------------CHHHHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc--------------cHHHHHHHHHHH
Confidence            2      1234567789999999999999988742 259999999876543221              245999999999


Q ss_pred             HHHHHHHh---cCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          151 KIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       151 ~~~~~~~~---~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                      .+++.++.   +|+++++++||.++++...          +....+..++..++|++.+.
T Consensus       137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----------~~~~~~~~~~~~~~dva~~~  186 (202)
T 3d7l_A          137 AFAKSAAIEMPRGIRINTVSPNVLEESWDK----------LEPFFEGFLPVPAAKVARAF  186 (202)
T ss_dssp             HHHHHHTTSCSTTCEEEEEEECCBGGGHHH----------HGGGSTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHccCCeEEEEEecCccCCchhh----------hhhhccccCCCCHHHHHHHH
Confidence            99888763   4899999999999998521          01111224566788887753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=6.1e-28  Score=187.56  Aligned_cols=180  Identities=18%  Similarity=0.158  Sum_probs=134.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      |++|||||+|+||++++++|+++  +|++++|++++.+.+... .. +++++|++|++++.++++   ++|+||||||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            78999999999999999999998  999999976443221110 11 788999999999999887   899999999974


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      ..      +.+++++.+++|+.++.++++++.+. +.++||++||..++.+.+.              ...|+.+|...+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~a~~  142 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQVPG--------------FAAYAAAKGALE  142 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHSSTT--------------BHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC--------------cchHHHHHHHHH
Confidence            22      34567789999999999999999554 3569999999987754322              245999999777


Q ss_pred             HHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          151 KIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       151 ~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      .+++.++    ++|+++++++||.++|+...           ....+..++..++|++.+..+
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------~~~~~~~~~~~~~dva~~~~~  194 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLWA-----------PLGGPPKGALSPEEAARKVLE  194 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------GGTSCCTTCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------ccCCCCCCCCCHHHHHHHHHH
Confidence            7665544    46999999999999998621           111223456667776665443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.94  E-value=2.2e-26  Score=186.72  Aligned_cols=188  Identities=17%  Similarity=0.097  Sum_probs=138.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEccCCChhhHHhhcC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~-----   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..            ...+.++++|++|.+++.++++     
T Consensus         8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   87 (274)
T 3e03_A            8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDT   87 (274)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999998776544322            2367889999999999877765     


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                        ++|+||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+...         
T Consensus        88 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------  158 (274)
T 3e03_A           88 FGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW---------  158 (274)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH---------
T ss_pred             cCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC---------
Confidence              68999999997421      234577889999999999999998764   2359999999876644100         


Q ss_pred             ccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecC-ceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          134 EEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPG-VIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg-~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                         .....|+.||.    +++.++.+++++|+++++|+|| .+.++....        ..  .....+...|++++.+..
T Consensus       159 ---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~--------~~--~~~~~~~~~pedvA~~v~  225 (274)
T 3e03_A          159 ---GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM--------LP--GVDAAACRRPEIMADAAH  225 (274)
T ss_dssp             ---HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CCCGGGSBCTHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh--------cc--cccccccCCHHHHHHHHH
Confidence               01245999999    4555666677789999999999 566664310        00  011234567888887777


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       226 ~l~  228 (274)
T 3e03_A          226 AVL  228 (274)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            664

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=3e-27  Score=191.07  Aligned_cols=197  Identities=12%  Similarity=0.058  Sum_probs=139.8

Q ss_pred             CEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCCCCC---C-CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISG---L-PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++||||||+  |+||++++++|+++|++|++++|+....+.   + ...+.+.++++|++|.+++.++++       ++|
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   94 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLD   94 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999  999999999999999999999997432111   1 111357889999999999887765       589


Q ss_pred             EEEEeCcccC-----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           68 VIFHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        68 ~vi~~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      +||||||...           .+.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.           
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  163 (271)
T 3ek2_A           95 GLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN-----------  163 (271)
T ss_dssp             EEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             EEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC-----------
Confidence            9999999742           12235677899999999999999988753 348999999877654332           


Q ss_pred             ccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHH-HHhhcccceeeeehhhHhhhhhhHHH
Q 027007          136 KYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVA-KLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                         ...|+.||+..+    .++.++.++|+++++|+||.+.++.......... ........+.+++..+++++.++.|+
T Consensus       164 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l  240 (271)
T 3ek2_A          164 ---YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFL  240 (271)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence               245999999555    4455566679999999999999987544322111 11112223346678888888777765


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       241 ~  241 (271)
T 3ek2_A          241 L  241 (271)
T ss_dssp             H
T ss_pred             c
Confidence            4

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.5e-28  Score=195.74  Aligned_cols=195  Identities=18%  Similarity=0.133  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....      ...+.++++|++|.+++.++++       ++|+
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  114 (281)
T 4dry_A           35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDL  114 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998654332111      1135889999999999877764       5799


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ||||||....       +.++|++.+++|+.+++++++++.+.+.     .++||++||..++.+.+.            
T Consensus       115 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------------  182 (281)
T 4dry_A          115 LVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN------------  182 (281)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT------------
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC------------
Confidence            9999997421       2345778999999999999999877531     359999999877654322            


Q ss_pred             cccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          137 YFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       137 ~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                        ...|+.||+..    +.++.+++++|+++++|+||.+.++.........  .......+..+...++|++.++.||-.
T Consensus       183 --~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~fL~s  258 (281)
T 4dry_A          183 --SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV--LQANGEVAAEPTIPIEHIAEAVVYMAS  258 (281)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE--ECTTSCEEECCCBCHHHHHHHHHHHHH
T ss_pred             --ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh--hhhhhcccccCCCCHHHHHHHHHHHhC
Confidence              24599999854    4555666677999999999999998642211000  000112334567889999988887754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=2.2e-27  Score=190.16  Aligned_cols=187  Identities=15%  Similarity=0.147  Sum_probs=135.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...        ....+.++++|++|.+++.++++       ++
T Consensus         9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (250)
T 3nyw_A            9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAV   88 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999999999865432211        11367889999999998877764       68


Q ss_pred             cEEEEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           67 HVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        67 d~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |+||||||....     +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+...              
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (250)
T 3nyw_A           89 DILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD--------------  154 (250)
T ss_dssp             EEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--------------
T ss_pred             CEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--------------
Confidence            999999997422     123567889999999999999997653   2469999999877653221              


Q ss_pred             cCcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.||..    ++.++.+++++|+++++|+||.+.++...       . .. ...+..++..|+|++.++.|+-
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-------~-~~-~~~~~~~~~~p~dva~~v~~l~  222 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-------K-AG-TPFKDEEMIQPDDLLNTIRCLL  222 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-------H-TT-CCSCGGGSBCHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-------h-cC-CCcccccCCCHHHHHHHHHHHH
Confidence            2459999995    45555666677999999999999887421       1 11 1122345678888887777654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=3.8e-26  Score=189.03  Aligned_cols=195  Identities=16%  Similarity=0.128  Sum_probs=140.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC--CCC---------------CCCCCeEEEEccCCChhhHHhhcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGL---------------PSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~---------------~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+....  ...               .....+.++++|++|.+++.++++
T Consensus        48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  127 (317)
T 3oec_A           48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD  127 (317)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            689999999999999999999999999998863211  100               011367899999999999877765


Q ss_pred             -------CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCccc
Q 027007           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIA  127 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~  127 (229)
                             ++|+||||||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..++.+.+.   
T Consensus       128 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~---  204 (317)
T 3oec_A          128 EALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG---  204 (317)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCC---
Confidence                   68999999997422      234677889999999999999997753    1358999999887754332   


Q ss_pred             CCCCccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchh--------------HHHHHHh-h
Q 027007          128 DENQVHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTG--------------NLVAKLQ-W  188 (229)
Q Consensus       128 ~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--------------~~~~~~~-~  188 (229)
                                 ...|+.||...    +.++.+++++||++++|+||++++|......              ....... .
T Consensus       205 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (317)
T 3oec_A          205 -----------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ  273 (317)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh
Confidence                       24599999954    4555566677999999999999998531100              0001111 1


Q ss_pred             cccceeeeehhhHhhhhhhHHHH
Q 027007          189 KKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ....+ .++..++|++.++.||-
T Consensus       274 ~~~~p-~~~~~pedvA~av~fL~  295 (317)
T 3oec_A          274 LTLLP-IPWVEPEDVSNAVAWLA  295 (317)
T ss_dssp             TCSSS-SSSBCHHHHHHHHHHHT
T ss_pred             hccCC-CCCCCHHHHHHHHHHHc
Confidence            11111 56678888888877664

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=2.8e-27  Score=194.20  Aligned_cols=195  Identities=13%  Similarity=0.080  Sum_probs=138.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+....      ...+.++++|++|.+++.++++       ++|
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998643321100      1368899999999999877765       469


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+    ..++||++||.+++.+.+.             
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  173 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-------------  173 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC-------------
Confidence            99999996321      224577889999999999999987643    2369999999877654321             


Q ss_pred             ccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC-Cc-hhH-HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK-LT-TGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ...|+.+|...+.+++.+    .++|+++++++||.+++++. .. ... ........ ..+.+++..++|++.++.|+
T Consensus       174 -~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dva~~~~~l  251 (302)
T 1w6u_A          174 -VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG-RIPCGRLGTVEELANLAAFL  251 (302)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHT-TCTTSSCBCHHHHHHHHHHH
T ss_pred             -cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHh-cCCcCCCCCHHHHHHHHHHH
Confidence             245999999777666554    44699999999999999832 11 111 11111111 22345667788877666554

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.94  E-value=1.8e-26  Score=202.65  Aligned_cols=161  Identities=18%  Similarity=0.145  Sum_probs=128.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC--
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (229)
                      |+|||||||||||++++++|+++|++|++++|+..+.+         .+.+|+.+.  +.++++++|+|||+|+....  
T Consensus       148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence            79999999999999999999999999999999876432         257787653  45667899999999997422  


Q ss_pred             -CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeee-cCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                       ...++...+++|+.++.++++++....+.++|||+||.++|+ .....+.+|..+.+    .+.|+.+|..+|.+....
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~----~~~y~~~~~~~E~~~~~~  292 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESG----DDFLAEVCRDWEHATAPA  292 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCC----SSHHHHHHHHHHHTTHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCC----cChHHHHHHHHHHHHHHH
Confidence             234566789999999999999955544578999999999998 43334455555442    356999999988887777


Q ss_pred             HhcCCCeEEEecCceecCCC
Q 027007          157 ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~  176 (229)
                      ...|++++++||+.+|||+.
T Consensus       293 ~~~gi~~~ilRp~~v~Gp~~  312 (516)
T 3oh8_A          293 SDAGKRVAFIRTGVALSGRG  312 (516)
T ss_dssp             HHTTCEEEEEEECEEEBTTB
T ss_pred             HhCCCCEEEEEeeEEECCCC
Confidence            77899999999999999985

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=4.6e-27  Score=183.47  Aligned_cols=150  Identities=20%  Similarity=0.270  Sum_probs=127.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+|+||||+|+||++++++|+++|+  +|++++|++.+     ...+++++.+|++|++++.+++  +|+|||+|+....
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~   78 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIK   78 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccc
Confidence            5899999999999999999999998  99999998765     1236888899999999998887  9999999987433


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                      ...++++.+++|+.++.++++++.+.+ .++||++||..+++..                .+.|+.+|..+|.+++.   
T Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~----------------~~~y~~sK~~~e~~~~~---  138 (215)
T 2a35_A           79 EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKS----------------SIFYNRVKGELEQALQE---  138 (215)
T ss_dssp             HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHTT---
T ss_pred             cCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCCC----------------ccHHHHHHHHHHHHHHH---
Confidence            335678899999999999999998874 6799999998887531                24599999999988775   


Q ss_pred             cCCC-eEEEecCceecCCCC
Q 027007          159 EGLP-IVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 ~gi~-~~~irpg~i~g~~~~  177 (229)
                      .|++ ++++||+.+|||...
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSC
T ss_pred             cCCCeEEEEeCceeeCCCCc
Confidence            4899 999999999999753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.2e-27  Score=195.37  Aligned_cols=191  Identities=15%  Similarity=0.165  Sum_probs=138.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      ++|||||+|+||++++++|+++|+   +|++++|+.++.+.+.       ....+.++++|++|.+++.++++       
T Consensus        35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  114 (287)
T 3rku_A           35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFK  114 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGC
T ss_pred             EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999987   9999999865433211       12367889999999999988765       


Q ss_pred             CccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        65 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      ++|+||||||....       +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.+.          
T Consensus       115 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----------  184 (287)
T 3rku_A          115 DIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT----------  184 (287)
T ss_dssp             SCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC----------
Confidence            48999999996421       224577899999999999999997643   2469999999877654332          


Q ss_pred             cccccCcHHHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCc----hhHHHHHHhhcccceeeeehhhHhhhhh
Q 027007          135 EKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLT----TGNLVAKLQWKKVDLVKDIFLLERMRHS  206 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (229)
                          ...|+.||+..+.+    +.+++++|+++++|+||.+.++....    ........... ..    ...++|++.+
T Consensus       185 ----~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~----p~~pedvA~~  255 (287)
T 3rku_A          185 ----GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-TT----PLMADDVADL  255 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-SC----CEEHHHHHHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-cC----CCCHHHHHHH
Confidence                24599999955555    45555679999999999999985210    11111111111 11    1267888877


Q ss_pred             hHHHH
Q 027007          207 CKFLT  211 (229)
Q Consensus       207 ~~~l~  211 (229)
                      +.|+-
T Consensus       256 v~~l~  260 (287)
T 3rku_A          256 IVYAT  260 (287)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            77654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=7.8e-27  Score=187.92  Aligned_cols=201  Identities=18%  Similarity=0.145  Sum_probs=141.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++...    +.  ....+.++++|++|.+++.++++       ++|+
T Consensus        16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   95 (265)
T 1h5q_A           16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999997544221    10  02367889999999998877664       4899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+    ..++||++||..++.+.....       .+..+
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-------~~~~~  168 (265)
T 1h5q_A           96 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-------NGSLT  168 (265)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-------TEECS
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc-------ccccc
Confidence            9999997432      223566789999999999999987653    136899999987654321100       00112


Q ss_pred             cCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+++.+    .++|+++++++||+++++.............. ...+.+++..+++++.++.|+
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l  243 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA-SNIPLNRFAQPEEMTGQAILL  243 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHH-HTCTTSSCBCGGGGHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHH-hcCcccCCCCHHHHHHHHHhh
Confidence            356999999766666554    45699999999999999964332111111111 122335677888888776665

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-26  Score=185.79  Aligned_cols=191  Identities=15%  Similarity=0.117  Sum_probs=134.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCC-ChhhHHhhcCCccEEEEeCcccCC-
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP-   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~~a~~~~~-   78 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+.+   ..+.++ +|+. +.+.+.+.+.++|+||||||.... 
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~   95 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAG   95 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCB
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCC
Confidence            3799999999999999999999999999999986332222   246667 9993 233333444489999999996422 


Q ss_pred             -----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                           +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|+.+|...+
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK~a~~  161 (249)
T 1o5i_A           96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN--------------LYTSNSARMALT  161 (249)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC--------------CchHHHHHHHHH
Confidence                 224577889999999999988876543   2469999999987754322              245999999555


Q ss_pred             HH----HHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          151 KI----ALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       151 ~~----~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .+    +.++.++|+++++|+||.+++|..... ......... ...+.+++..++|++.++.|+
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~~i~~l  225 (249)
T 1o5i_A          162 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVE-SQIPMRRMAKPEEIASVVAFL  225 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHH-TTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence            54    455556799999999999999963211 111110111 122345677888888777665

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.94  E-value=2.5e-27  Score=191.99  Aligned_cols=195  Identities=16%  Similarity=0.166  Sum_probs=139.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCC-----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+..+ .+.+     .....+.++++|++|.+++.++++       ++|+
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999996432 1111     012368899999999999877765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              .
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG--------------Q  176 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC--------------c
Confidence            9999997432      224577889999999999999987653   2469999999877654332              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|...+.+.    .++..+|+++++++||.+.++............ .....+.+++..++|++.++.|+-
T Consensus       177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~p~dvA~~i~~l~  251 (271)
T 4iin_A          177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKAD-YVKNIPLNRLGSAKEVAEAVAFLL  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------CGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHH-HHhcCCcCCCcCHHHHHHHHHHHh
Confidence            45999999665555    455567999999999999998753322211111 122234467778888888776653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.94  E-value=7.5e-27  Score=187.39  Aligned_cols=201  Identities=15%  Similarity=0.059  Sum_probs=131.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC----ccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~vi~~a~~~   76 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.       . +++|++|.+++.+++++    +|+||||||..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            158999999999999999999999999999998755332       1 57899999999888754    59999999975


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCC-----Cc---------ccccccc
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADEN-----QV---------HEEKYFC  139 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~-----~~---------~~~~~~~  139 (229)
                      .. ...+++.+++|+.++.++++++.+.+   ..++||++||..++.........+.     ..         ..+....
T Consensus        74 ~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           74 PQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             TT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            41 24588999999999999999998653   2369999999987732111000000     00         0011123


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCch-hH-HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTT-GN-LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..|+.||...+.+.    +++.++|+++++|+||.+.++..... .. ...........+.++...+++++.++.|+
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  229 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHH
Confidence            56999999666555    45556799999999999999874321 11 11111110012234567788887776655

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=2.9e-26  Score=185.04  Aligned_cols=194  Identities=15%  Similarity=0.100  Sum_probs=142.3

Q ss_pred             EEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCCCCCCC---C---CCCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDISG---L---PSEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+  ||++++++|+++|++|++++|+....+.   +   .....+.++++|++|.+++.++++       ++
T Consensus         9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (266)
T 3oig_A            9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVI   88 (266)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCC
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCe
Confidence            6899999976  9999999999999999999997532111   0   111268899999999999877765       68


Q ss_pred             cEEEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCcccc
Q 027007           67 HVIFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |+||||||...          .+.+++++.+++|+.++.++++++.+.+.. ++||++||..++.+.+.           
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  157 (266)
T 3oig_A           89 HGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN-----------  157 (266)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred             eEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC-----------
Confidence            99999999743          122356678999999999999999988642 49999999877654332           


Q ss_pred             ccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          136 KYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                         ...|+.||+..+    .+++++.++|+++++|+||.+.++......   .......  ...+.+++..+++++.++.
T Consensus       158 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~dva~~v~  232 (266)
T 3oig_A          158 ---YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIE--ERAPLRRTTTPEEVGDTAA  232 (266)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHH--HHSTTSSCCCHHHHHHHHH
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHH--hcCCCCCCCCHHHHHHHHH
Confidence               245999999554    555566677999999999999998643322   1112111  1223456778888887776


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       233 ~l~  235 (266)
T 3oig_A          233 FLF  235 (266)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.94  E-value=3e-27  Score=189.30  Aligned_cols=195  Identities=18%  Similarity=0.211  Sum_probs=139.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCe-EEEEccCCChhhHHhhc------CCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGAL-ELVYGDVTDYRSLVDAC------FGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~-~~~~~D~~~~~~~~~~~------~~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+ .++++|++|.+++.+++      .++|+||||
T Consensus        13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~   92 (254)
T 2wsb_A           13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNS   92 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEEC
Confidence            69999999999999999999999999999998653322111  1245 78999999999988776      478999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+..            +...|+
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------~~~~Y~  160 (254)
T 2wsb_A           93 AGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ------------FASSYM  160 (254)
T ss_dssp             CCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS------------CBHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC------------cchHHH
Confidence            997422      123466789999999999999886542   25699999998776543211            114599


Q ss_pred             HHHHHHHHHHHHH----HhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .+|...+.+++.+    .++|+++++++||.++||.....   ........ . ..+.+++..++|++.++.|+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dva~~~~~l  232 (254)
T 2wsb_A          161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWL-D-MTPMGRCGEPSEIAAAALFL  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHH-H-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHH-h-cCCCCCCCCHHHHHHHHHHH
Confidence            9999777666554    45599999999999999863211   11112211 1 12235667788887776654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=5.4e-27  Score=190.86  Aligned_cols=195  Identities=15%  Similarity=0.124  Sum_probs=141.8

Q ss_pred             EEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCC--CCCCCCC-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRT--SDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~--iG~~l~~~l~~~g~~V~~~~r~~--~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+  ||++++++|+++|++|++++|+.  +..+++. ....+.++++|++|.+++.++++       ++|+|
T Consensus        28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l  107 (280)
T 3nrc_A           28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAI  107 (280)
T ss_dssp             EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999955  99999999999999999999986  1111111 11357899999999999877764       57999


Q ss_pred             EEeCcccC-----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           70 FHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        70 i~~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |||||...           .+.+++++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.            
T Consensus       108 i~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  175 (280)
T 3nrc_A          108 VHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS------------  175 (280)
T ss_dssp             EECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT------------
T ss_pred             EECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC------------
Confidence            99999743           23345677899999999999999987642  359999999877654332            


Q ss_pred             cccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCchhHHHH-HHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVA-KLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.||+..+    .+++++.++|+++++++||.+.++.......... ........+.++...++|++.++.|+
T Consensus       176 --~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l  252 (280)
T 3nrc_A          176 --YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFL  252 (280)
T ss_dssp             --THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHT
T ss_pred             --chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence              245999999555    4455566679999999999999987533221111 11112223346677888888776665

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.94  E-value=5.8e-27  Score=190.81  Aligned_cols=195  Identities=19%  Similarity=0.225  Sum_probs=141.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++       ++|+||||
T Consensus         7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   86 (281)
T 3zv4_A            7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPN   86 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999999999999998654332211  1368899999999998877654       58999999


Q ss_pred             CcccCCC-------C----CCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           73 AALVEPW-------L----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        73 a~~~~~~-------~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||.....       .    ++|++.+++|+.+++++++++.+.+  ..++||++||..++.+.+.              .
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  152 (281)
T 3zv4_A           87 AGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG--------------G  152 (281)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS--------------C
T ss_pred             CCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC--------------C
Confidence            9974211       1    1367789999999999999998764  1359999999877654332              2


Q ss_pred             CcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchh-----H-----HHHHHhhcccceeeeehhhHhhhh
Q 027007          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTG-----N-----LVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                      ..|+.||...+.+.    ++++++ +++++|+||.+.++......     .     ..... .....+.++++.++|++.
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~pedvA~  230 (281)
T 3zv4_A          153 PLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADM-LKSVLPIGRMPALEEYTG  230 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHH-HHHTCTTSSCCCGGGGSH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHH-HHhcCCCCCCCCHHHHHH
Confidence            34999999555554    455554 99999999999998642110     0     01111 223335678889999998


Q ss_pred             hhHHHHH
Q 027007          206 SCKFLTW  212 (229)
Q Consensus       206 ~~~~l~~  212 (229)
                      ++.||-.
T Consensus       231 ~v~fL~s  237 (281)
T 3zv4_A          231 AYVFFAT  237 (281)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhhc
Confidence            8877653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.94  E-value=7.7e-27  Score=188.63  Aligned_cols=194  Identities=18%  Similarity=0.195  Sum_probs=144.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|+++.+.. ++.+.    + .....+.++++|++|.+++.++++       ++|+
T Consensus        28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            689999999999999999999999998776543 22111    1 112468899999999999887765       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.    ...++||++||..++.+.+.              
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  173 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG--------------  173 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT--------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC--------------
Confidence            9999997432      23467788999999999999987532    23469999999877654432              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|+    +++.+++++.++|+++++++||.+.++..............  ..+.+++..++|++.++.|+-
T Consensus       174 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~p~~~~~~~edva~~~~~L~  248 (267)
T 4iiu_A          174 QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMS--MIPMKRMGQAEEVAGLASYLM  248 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHH--TCTTCSCBCHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHh
Confidence            245999999    66666677777799999999999999976544333333222  223467788888888877754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=7.5e-27  Score=194.12  Aligned_cols=193  Identities=18%  Similarity=0.142  Sum_probs=141.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCCCCCCCC------CCCCCeEEEEccCCChh-----------------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGL------PSEGALELVYGDVTDYR-----------------   57 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~------~~~~~~~~~~~D~~~~~-----------------   57 (229)
                      ++|||||+|+||++++++|+++|++|++++ |+.++.+.+      .....+.++++|++|.+                 
T Consensus        48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~  127 (328)
T 2qhx_A           48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT  127 (328)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHH
Confidence            589999999999999999999999999999 875432211      01136889999999998                 


Q ss_pred             hHHhhcC-------CccEEEEeCcccCC------C--------------CCCchhhhHhhHHHHHHHHHHHHhcC---C-
Q 027007           58 SLVDACF-------GCHVIFHTAALVEP------W--------------LPDPSRFFAVNVEGLKNVVQAAKETK---T-  106 (229)
Q Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~~------~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~---~-  106 (229)
                      ++.++++       ++|+||||||....      +              .++|++.+++|+.+++++++++.+.+   . 
T Consensus       128 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  207 (328)
T 2qhx_A          128 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  207 (328)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            8877665       68999999997421      1              23456789999999999999987653   2 


Q ss_pred             -----CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCC
Q 027007          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       107 -----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                           .++||++||..++.+.+.              ...|+.+|+..+.    ++.++.++||++++|+||++.++. .
T Consensus       208 ~~~~~~g~IV~isS~~~~~~~~~--------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~  272 (328)
T 2qhx_A          208 KHRGTNYSIINMVDAMTNQPLLG--------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  272 (328)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C
T ss_pred             cCCCCCcEEEEECchhhccCCCC--------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c
Confidence                 469999999876654322              2459999995554    455566679999999999999997 3


Q ss_pred             chhHHHHHHhhcccceee-eehhhHhhhhhhHHHH
Q 027007          178 TTGNLVAKLQWKKVDLVK-DIFLLERMRHSCKFLT  211 (229)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  211 (229)
                      .......... . ..++. +++.+++++.++.|+-
T Consensus       273 ~~~~~~~~~~-~-~~p~~~r~~~pedvA~~v~~l~  305 (328)
T 2qhx_A          273 MPPAVWEGHR-S-KVPLYQRDSSAAEVSDVVIFLC  305 (328)
T ss_dssp             SCHHHHHHHH-T-TCTTTTSCBCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHH-h-hCCCCCCCCCHHHHHHHHHHHh
Confidence            3222222221 2 22334 6778888888877764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=3.7e-27  Score=187.81  Aligned_cols=185  Identities=15%  Similarity=0.137  Sum_probs=137.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-----   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-----   64 (229)
                      ++|||||+|+||++++++|+++|+       +|++++|+.++.+.+.     ....+.++++|++|++++.++++     
T Consensus         4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (244)
T 2bd0_A            4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   83 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999       9999999764332211     12367889999999999887765     


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                        ++|+||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.         
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  154 (244)
T 2bd0_A           84 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH---------  154 (244)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred             CCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC---------
Confidence              69999999997432      224577889999999999999987642   3469999999887754321         


Q ss_pred             ccccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          134 EEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                           ...|+.+|...+.+.+.    +.++|+++++++||+++||........       .   ..+...+++++.++.|
T Consensus       155 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~---~~~~~~~~dva~~~~~  219 (244)
T 2bd0_A          155 -----SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-------M---QALMMMPEDIAAPVVQ  219 (244)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-------T---GGGSBCHHHHHHHHHH
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc-------c---cccCCCHHHHHHHHHH
Confidence                 24599999977766644    445699999999999999975321110       0   0245667777665544


Q ss_pred             H
Q 027007          210 L  210 (229)
Q Consensus       210 l  210 (229)
                      +
T Consensus       220 l  220 (244)
T 2bd0_A          220 A  220 (244)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.94  E-value=3.3e-27  Score=192.14  Aligned_cols=196  Identities=18%  Similarity=0.176  Sum_probs=142.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC------CccEEEEe-
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF------GCHVIFHT-   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~-   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..  ...+.++++|++|.+++.++++      ++|+|||| 
T Consensus        32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~a  111 (281)
T 3ppi_A           32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAH  111 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEcc
Confidence            58999999999999999999999999999998654332211  1368899999999999887765      58999999 


Q ss_pred             CcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcC---------CCceEEEEccceeeecCCCcccCCCCc
Q 027007           73 AALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        73 a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                      |+....           +.+++++.+++|+.++.++++++.+.+         ..++||++||..++.+.+.        
T Consensus       112 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  183 (281)
T 3ppi_A          112 GGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG--------  183 (281)
T ss_dssp             CCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT--------
T ss_pred             CcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC--------
Confidence            544211           112367889999999999999987543         2348999999987754332        


Q ss_pred             cccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                            ...|+.||+    +++.++.++.++|+++++++||.+.++....................+++..++|++.++.
T Consensus       184 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~  257 (281)
T 3ppi_A          184 ------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAA  257 (281)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHH
T ss_pred             ------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence                  245999999    5555666666779999999999999875322222222222222222266788899888877


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       258 ~l~  260 (281)
T 3ppi_A          258 FLL  260 (281)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=2e-25  Score=172.75  Aligned_cols=152  Identities=24%  Similarity=0.259  Sum_probs=125.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+|+||||+|+||++++++|+++|++|++++|++++.+... ..+++++++|++|++++.++++++|+|||+|+....  
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   80 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND--   80 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC--
Confidence            68999999999999999999999999999999876654432 237889999999999999999999999999987433  


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                      .++   .++|+.++.++++++.+.+ .++||++||..+|+.....+.          +...|+.+|..+|.+++.   .+
T Consensus        81 ~~~---~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~----------~~~~y~~~K~~~e~~~~~---~~  143 (206)
T 1hdo_A           81 LSP---TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLRE---SG  143 (206)
T ss_dssp             CSC---CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCG----------GGHHHHHHHHHHHHHHHH---TC
T ss_pred             CCc---cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccc----------cchhHHHHHHHHHHHHHh---CC
Confidence            122   3589999999999998874 679999999988765432110          235699999999988753   68


Q ss_pred             CCeEEEecCcee
Q 027007          161 LPIVPVYPGVIY  172 (229)
Q Consensus       161 i~~~~irpg~i~  172 (229)
                      ++++++||+.++
T Consensus       144 i~~~~lrp~~~~  155 (206)
T 1hdo_A          144 LKYVAVMPPHIG  155 (206)
T ss_dssp             SEEEEECCSEEE
T ss_pred             CCEEEEeCCccc
Confidence            999999999983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.94  E-value=9.5e-27  Score=189.83  Aligned_cols=194  Identities=18%  Similarity=0.159  Sum_probs=137.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.+    . ....+.++.+|++|.+++.++++       ++|+|
T Consensus        46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~l  125 (285)
T 2c07_A           46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDIL  125 (285)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999998875432211    1 12367889999999999887763       68999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ..
T Consensus       126 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  191 (285)
T 2c07_A          126 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--------------QA  191 (285)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------CH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC--------------Cc
Confidence            999997432      223567789999999999999887642   2469999999876644322              24


Q ss_pred             cHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          141 QYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       141 ~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .|+.+|...+.++    .++.+.|+++++++||.++++............... ..+.+++..+++++.++.|+
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~~~~l  264 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIIS-NIPAGRMGTPEEVANLACFL  264 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHT-TCTTSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHh-hCCCCCCCCHHHHHHHHHHH
Confidence            5999999555554    455566999999999999998643222111111111 12234567788888776554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=4.3e-26  Score=181.87  Aligned_cols=161  Identities=22%  Similarity=0.219  Sum_probs=126.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+|+||++++++|+++  |++|++++|++++.+.+.  .+++++.+|++|++++.++++++|+|||+|+....
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~   82 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQGIDALVILTSAVPK   82 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHHcCCCEEEEecccccc
Confidence            58999999999999999999999  899999999865433332  25678999999999999999999999999986421


Q ss_pred             ------------C---CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           79 ------------W---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        79 ------------~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                                  .   .+++.+.+++|+.++.++++++.+.+ .++||++||..++.+..        +..+ ...+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~--------~~~~-~~~~~y~  152 (253)
T 1xq6_A           83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDH--------PLNK-LGNGNIL  152 (253)
T ss_dssp             ECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTC--------GGGG-GGGCCHH
T ss_pred             ccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCCC--------cccc-ccchhHH
Confidence                        0   11223568999999999999998874 67999999987643211        1000 0113488


Q ss_pred             HHHHHHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          144 RSKAVADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+|..+|.+++.   .|++++++|||.+||+..
T Consensus       153 ~sK~~~e~~~~~---~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          153 VWKRKAEQYLAD---SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             HHHHHHHHHHHT---SSSCEEEEEECEEECSCS
T ss_pred             HHHHHHHHHHHh---CCCceEEEecceeecCCc
Confidence            899999988764   689999999999999964

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=6.5e-27  Score=191.41  Aligned_cols=193  Identities=18%  Similarity=0.139  Sum_probs=141.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCCCCCCCC------CCCCCeEEEEccCCChh-----------------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGL------PSEGALELVYGDVTDYR-----------------   57 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~------~~~~~~~~~~~D~~~~~-----------------   57 (229)
                      ++|||||+|+||++++++|+++|++|++++ |+.++.+.+      .....+.++++|++|.+                 
T Consensus        11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   90 (291)
T 1e7w_A           11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   90 (291)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHH
Confidence            689999999999999999999999999999 875432211      01236889999999999                 


Q ss_pred             hHHhhcC-------CccEEEEeCcccCC------C--------------CCCchhhhHhhHHHHHHHHHHHHhcC---C-
Q 027007           58 SLVDACF-------GCHVIFHTAALVEP------W--------------LPDPSRFFAVNVEGLKNVVQAAKETK---T-  106 (229)
Q Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~~------~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~---~-  106 (229)
                      ++.++++       ++|+||||||....      +              .++|++.+++|+.+++++++++.+.+   + 
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~  170 (291)
T 1e7w_A           91 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  170 (291)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            8877665       68999999997421      1              23456789999999999999998653   2 


Q ss_pred             -----CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCC
Q 027007          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       107 -----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~  177 (229)
                           .++||++||..++.+.++              ...|+.||...    +.++.+++++||++++|+||.+.++. .
T Consensus       171 ~~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          171 KHRGTNYSIINMVDAMTNQPLLG--------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             CCCCCCcEEEEEechhhcCCCCC--------------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence                 368999999877654322              24599999954    45555666779999999999999987 2


Q ss_pred             chhHHHHHHhhcccceee-eehhhHhhhhhhHHHH
Q 027007          178 TTGNLVAKLQWKKVDLVK-DIFLLERMRHSCKFLT  211 (229)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  211 (229)
                      ........ ... ..+.+ +++.|++++.++.|+-
T Consensus       236 ~~~~~~~~-~~~-~~p~~~r~~~pedvA~~v~~l~  268 (291)
T 1e7w_A          236 MPPAVWEG-HRS-KVPLYQRDSSAAEVSDVVIFLC  268 (291)
T ss_dssp             SCHHHHHH-HHT-TCTTTTSCBCHHHHHHHHHHHH
T ss_pred             CCHHHHHH-HHh-hCCCCCCCCCHHHHHHHHHHHh
Confidence            11122122 112 22344 6778999988877764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=3.5e-26  Score=182.28  Aligned_cols=168  Identities=18%  Similarity=0.156  Sum_probs=125.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCC--CCCCeEEEEccCCChhhHHhhcC---------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP--SEGALELVYGDVTDYRSLVDACF---------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|  ++|++++|+.++.+.+.  ....++++.+|++|.+++.++++         ++|+
T Consensus         5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~   84 (250)
T 1yo6_A            5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcE
Confidence            69999999999999999999999  99999999865443221  12478899999999999888776         7999


Q ss_pred             EEEeCcccC-C------CCCCchhhhHhhHHHHHHHHHHHHhcC---------C-----CceEEEEccceeeecCCCccc
Q 027007           69 IFHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---------T-----VEKIIYTSSFFALGSTDGYIA  127 (229)
Q Consensus        69 vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~iv~~sS~~~~~~~~~~~~  127 (229)
                      ||||||... .      +.+++++.+++|+.++.++++++.+.+         .     .++||++||..++.+....  
T Consensus        85 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  162 (250)
T 1yo6_A           85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--  162 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS--
T ss_pred             EEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc--
Confidence            999999744 1      223467789999999999999987652         2     4699999998776543210  


Q ss_pred             CCCCccccccccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCC
Q 027007          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       128 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~  176 (229)
                        ..+   ......|+.+|+..+.+++.++    ++|+++++++||.+.++..
T Consensus       163 --~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  210 (250)
T 1yo6_A          163 --GSA---QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             --TTS---SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             --ccc---cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC
Confidence              000   0123469999997776665544    4589999999999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.93  E-value=2.9e-26  Score=186.53  Aligned_cols=154  Identities=19%  Similarity=0.194  Sum_probs=123.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |+|||||+ ||||++++++|+++|++|++++|++++...+.. .+++++.+|++|.+     ++++|+|||+|+..... 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~-   77 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG-   77 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB-
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc-----cCCCCEEEECCCccccc-
Confidence            68999998 999999999999999999999998754332211 36899999999955     68899999999864321 


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhc-CCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                         .       ..+.++++++.+. .+.++|||+||..+|+.....+.+|+.+..+   .+.|+.+|..+|.+++.+  .
T Consensus        78 ---~-------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~--~  142 (286)
T 3ius_A           78 ---D-------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP---TAARGRWRVMAEQQWQAV--P  142 (286)
T ss_dssp             ---C-------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC---CSHHHHHHHHHHHHHHHS--T
T ss_pred             ---c-------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC---CCHHHHHHHHHHHHHHhh--c
Confidence               1       1256788888773 2467999999999999876656666655443   467999999999999887  6


Q ss_pred             CCCeEEEecCceecCCCC
Q 027007          160 GLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       160 gi~~~~irpg~i~g~~~~  177 (229)
                      +++++++||+++|||+..
T Consensus       143 ~~~~~ilRp~~v~G~~~~  160 (286)
T 3ius_A          143 NLPLHVFRLAGIYGPGRG  160 (286)
T ss_dssp             TCCEEEEEECEEEBTTBS
T ss_pred             CCCEEEEeccceECCCch
Confidence            899999999999999753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.93  E-value=1.9e-25  Score=180.41  Aligned_cols=153  Identities=24%  Similarity=0.317  Sum_probs=125.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+ +|++|++++|+++. +   .  +   +.+|++|++++.+++++  +|+|||+|+....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~---~--~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q---G--G---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T---T--C---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C---C--C---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            899999999999999999999 58999999998642 1   1  2   78999999999998875  9999999997432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        +..++++.+++|+.++.++++++.+.+ . +||++||..+|++... +.+|+.+..   +.+.|+.+|..+|.+++. 
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~-~~~e~~~~~---~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG-NYKEEDIPN---PINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC-SBCTTSCCC---CSSHHHHHHHHHHHHHCC-
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC-CcCCCCCCC---CCCHHHHHHHHHHHHHhC-
Confidence              124678899999999999999998874 3 9999999999976554 334443322   246799999999998876 


Q ss_pred             HhcCCCeEEEecCceecC
Q 027007          157 ASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~  174 (229)
                          ++++++||+.+||+
T Consensus       144 ----~~~~~iR~~~v~G~  157 (273)
T 2ggs_A          144 ----DDSLIIRTSGIFRN  157 (273)
T ss_dssp             ----TTCEEEEECCCBSS
T ss_pred             ----CCeEEEeccccccc
Confidence                67899999999984

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=4.8e-27  Score=190.05  Aligned_cols=161  Identities=18%  Similarity=0.152  Sum_probs=125.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++| +.++.+.+    . ....+.++++|++|++++.++++       ++|
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d  101 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD  101 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999999999999999999 43322111    0 12367889999999999988776       789


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceee-ecCCCcccCCCCcccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+. .++||++||..++ .+.+.              .
T Consensus       102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------~  167 (274)
T 1ja9_A          102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--------------H  167 (274)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--------------C
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCC--------------C
Confidence            99999997432      2234677899999999999999987642 1599999998776 33221              2


Q ss_pred             CcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.+|...+.+++.+    ..+|+++++++||.++++.
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            45999999777766654    4459999999999999875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=5.6e-27  Score=186.68  Aligned_cols=194  Identities=16%  Similarity=0.175  Sum_probs=135.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCCC-----CCCCeEE-EEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALEL-VYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~-~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|+++ +|+.++.+.+.     ....+.. +.+|++|.+++.++++       ++|
T Consensus         3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (245)
T 2ph3_A            3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLD   82 (245)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCC
Confidence            69999999999999999999999999998 67644322110     0124556 8999999999877754       799


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  148 (245)
T 2ph3_A           83 TLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG--------------  148 (245)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC--------------
Confidence            99999997432      223567889999999998888876542   2469999999866543321              


Q ss_pred             cCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+.    .++.++|+++++++||.+++|................. +.+++..+++++.+..++
T Consensus       149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l  223 (245)
T 2ph3_A          149 QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI-PAGRFGRPEEVAEAVAFL  223 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC-TTCSCBCHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            245999999555554    45555699999999999999853221111111121211 234566777777665543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=5.9e-27  Score=189.92  Aligned_cols=195  Identities=16%  Similarity=0.142  Sum_probs=134.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcCC-------ccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG-------CHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+    .....+.++++|++|.+++.++++.       +|+||
T Consensus        23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  102 (272)
T 2nwq_A           23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI  102 (272)
T ss_dssp             EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            689999999999999999999999999999986433221    1113688899999999999887654       69999


Q ss_pred             EeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCc-eEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVE-KIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||....       +.++|++.+++|+.+++++++++.+.+   ..+ +||++||..++.+.+.              .
T Consensus       103 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~--------------~  168 (272)
T 2nwq_A          103 NNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG--------------S  168 (272)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT--------------C
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC--------------C
Confidence            99997421       224577889999999999999987653   245 9999999877644322              2


Q ss_pred             CcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|...+.+.+.++    ++|+++++|+||.+.++.................. ......++|++.+..|+-
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYA-GAHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------CCCCBCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhc-cCCCCCHHHHHHHHHHHh
Confidence            459999997777776655    56899999999999998642110000000000000 112357888877766653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.93  E-value=1.3e-26  Score=183.51  Aligned_cols=161  Identities=19%  Similarity=0.159  Sum_probs=118.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.. ..++.++++|++|.+++.++++       ++|+|||||
T Consensus         7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~A   86 (234)
T 2ehd_A            7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNA   86 (234)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            59999999999999999999999999999997643322111 0257889999999998877664       689999999


Q ss_pred             cccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....      +.+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+.+.              ...|+.
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~~  152 (234)
T 2ehd_A           87 GVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG--------------GAAYNA  152 (234)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT--------------CHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC--------------CchhhH
Confidence            97432      223567889999999998888876542   2469999999876643221              245999


Q ss_pred             HHHHHHH----HHHHHHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADK----IALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +|...+.    ++.++.++|+++++++||.+.++..
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  188 (234)
T 2ehd_A          153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA  188 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEECC-------
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcc
Confidence            9995554    4555556799999999999998863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=1.7e-26  Score=183.11  Aligned_cols=187  Identities=15%  Similarity=0.089  Sum_probs=140.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+...      ....+.++++|++|++++.++++       ++|+
T Consensus         4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (235)
T 3l77_A            4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV   83 (235)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            5899999999999999999999999999999865433211      12368899999999999988876       6899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||||....      +.+++++.+++|+.++.++++++.+.+  ..+++|++||..+....+.              ..
T Consensus        84 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~~  149 (235)
T 3l77_A           84 VVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY--------------GG  149 (235)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT--------------CH
T ss_pred             EEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC--------------cc
Confidence            9999997422      234577889999999999999998753  1347888888765543221              24


Q ss_pred             cHHHHHHHHHHHHHHHH--hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADKIALQAA--SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~--~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|+..+.+.+.+.  .+|+++++++||.+.++.......         .....++..++|++.+..|+-
T Consensus       150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~---------~~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG---------KPKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC---------CCGGGTCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC---------cccccCCCCHHHHHHHHHHHH
Confidence            59999998888887763  458999999999999986432211         001124567888887766653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.93  E-value=7.2e-27  Score=187.30  Aligned_cols=196  Identities=16%  Similarity=0.162  Sum_probs=141.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-CCCCCC----C-CCCCCeEEEEccCCChhhHHhhcC-----------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISG----L-PSEGALELVYGDVTDYRSLVDACF-----------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-----------   64 (229)
                      ++|||||+|+||++++++|+++|++|++++++ .++.+.    + .....+.++.+|++|.+++.++++           
T Consensus         9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A            9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            68999999999999999999999999987554 322211    1 112367889999999998877654           


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                        ++|+||||||....      +.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.           
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----------  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT-----------
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC-----------
Confidence              28999999997422      2235677899999999999999988752 348999999877654332           


Q ss_pred             ccccCcHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          136 KYFCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                         ...|+.||++.+.    ++.++.++|+++++++||.+.++....... ...........+.+++..++|++.++.|+
T Consensus       158 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  234 (255)
T 3icc_A          158 ---FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFL  234 (255)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             ---cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHH
Confidence               2459999995554    455566679999999999999997543211 11111222233456788899998887766


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       235 ~  235 (255)
T 3icc_A          235 A  235 (255)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.93  E-value=1.5e-26  Score=191.65  Aligned_cols=161  Identities=19%  Similarity=0.153  Sum_probs=127.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+||||++++++|+++|++|++++|+.++.+.+.       ....+.++.+|++|.+++.++++       ++|
T Consensus        10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (319)
T 3ioy_A           10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVS   89 (319)
T ss_dssp             EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999999999999999865433211       11268899999999999877765       579


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---------CCceEEEEccceeeecCCCcccCCCCc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                      +||||||....      +.+++++.+++|+.|+.++++++.+.+         ..++||++||..++.+.+..       
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~-------  162 (319)
T 3ioy_A           90 ILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP-------  162 (319)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS-------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC-------
Confidence            99999997422      224577889999999999999987764         13589999999877654322       


Q ss_pred             cccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                             ..|+.||.    +++.+++++.++|+++++|+||.+.+|..
T Consensus       163 -------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  203 (319)
T 3ioy_A          163 -------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY  203 (319)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence                   34999999    77888888888899999999999999864

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=4.1e-26  Score=179.67  Aligned_cols=181  Identities=14%  Similarity=0.074  Sum_probs=137.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~~   78 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.+               +|++|++++.++++   ++|+||||||....
T Consensus         8 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~   72 (223)
T 3uce_A            8 VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAGSYAP   72 (223)
T ss_dssp             EEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            5899999999999999999999999999999753               79999999988775   68999999997421


Q ss_pred             -------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           79 -------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        79 -------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                             +.++|++.+++|+.++.++++++.+.+. .++||++||..++.+.+.              ...|+.+|...+
T Consensus        73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~Y~asK~a~~  138 (223)
T 3uce_A           73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN--------------TYVKAAINAAIE  138 (223)
T ss_dssp             CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT--------------CHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC--------------chHHHHHHHHHH
Confidence                   2235777899999999999999998753 248999999887654332              245999999777


Q ss_pred             HHHHHHHhc--CCCeEEEecCceecCCCCchhHH-HHH--HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          151 KIALQAASE--GLPIVPVYPGVIYGPGKLTTGNL-VAK--LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       151 ~~~~~~~~~--gi~~~~irpg~i~g~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+.+.++.+  .+++++++||.+.+|........ ...  .......+.+++..++|++.+..|+.
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  204 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI  204 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence            776665532  29999999999999864332211 111  11122234567888999987776654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=6.8e-26  Score=181.55  Aligned_cols=180  Identities=16%  Similarity=0.118  Sum_probs=136.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++...       ..+.+|++|.+++.++++       ++|+||||||
T Consensus        24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            69999999999999999999999999999998765332       357889999999877764       4799999999


Q ss_pred             ccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ....       +.+++++.+++|+.++.++++++.+.+.. ++||++||..++.+.+.              ...|+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  162 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG--------------MIAYGATK  162 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHHHH
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC--------------CchhHHHH
Confidence            6321       22356788999999999999999887532 48999999887654322              24599999


Q ss_pred             HHHHHHHHHHH------hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          147 AVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       147 ~~~e~~~~~~~------~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...+.+++.++      ++|+++++|+||++.++..       ....  ...+..+...+++++.++.|+-
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-------~~~~--~~~~~~~~~~~~dva~~i~~l~  224 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-------RKYM--SDANFDDWTPLSEVAEKLFEWS  224 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-------HHHC--TTSCGGGSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-------hhhc--ccccccccCCHHHHHHHHHHHh
Confidence            98887777654      3589999999999988742       1111  1122345667888877766653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.93  E-value=3.9e-25  Score=200.64  Aligned_cols=171  Identities=17%  Similarity=0.195  Sum_probs=135.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++|++|++++|+......    +.  ...+++++++|++|++++.++++  ++|+|||+
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            579999999999999999999999999999997543211    00  01357889999999999999888  79999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCC----cccCCCCccccccccCcHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG----YIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      |+....  ...++.+.+++|+.++.++++++.+.+ .++||++||.++|+....    .+.+|..+..   +.+.|+.+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~---p~~~Y~~sK  167 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLG---PTNPYGHTK  167 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC---CCSHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCC---CCChHHHHH
Confidence            986432  123456789999999999999998874 679999999999875421    2233333222   246799999


Q ss_pred             HHHHHHHHHHHh---cCCCeEEEecCceecCC
Q 027007          147 AVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       147 ~~~e~~~~~~~~---~gi~~~~irpg~i~g~~  175 (229)
                      .++|.+++.++.   .+++++++||+++|||.
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccCCC
Confidence            999999998764   58999999999999985

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.93  E-value=3.4e-25  Score=185.25  Aligned_cols=188  Identities=14%  Similarity=0.124  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEccCCChhhHHhhcC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~-----   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..            ...+.++++|++|.+++.++++     
T Consensus        47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~  126 (346)
T 3kvo_A           47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKK  126 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998776544321            1367889999999999887765     


Q ss_pred             --CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcc
Q 027007           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVH  133 (229)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~  133 (229)
                        ++|+||||||....      +.++|++.+++|+.+++++++++.+.+.   .++||++||..++.+...+        
T Consensus       127 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~--------  198 (346)
T 3kvo_A          127 FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK--------  198 (346)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC--------
Confidence              68999999997422      2245778899999999999999987642   3599999998776542100        


Q ss_pred             ccccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCc-eecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          134 EEKYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGV-IYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                          ....|+.||...+.+.+    ++. +||++++|+||. +.++.       .. .+ ....+..+...+++++.++.
T Consensus       199 ----~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~-------~~-~~-~~~~~~~r~~~pedvA~~v~  264 (346)
T 3kvo_A          199 ----QHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAA-------MD-ML-GGPGIESQCRKVDIIADAAY  264 (346)
T ss_dssp             ----SSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHH-------HH-HH-CC--CGGGCBCTHHHHHHHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHH-------HH-hh-ccccccccCCCHHHHHHHHH
Confidence                12459999996555554    444 689999999995 55442       11 11 11223456678888888777


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      |+-
T Consensus       265 ~L~  267 (346)
T 3kvo_A          265 SIF  267 (346)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.93  E-value=3.4e-25  Score=185.87  Aligned_cols=166  Identities=19%  Similarity=0.226  Sum_probs=132.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-----CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCC---ccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~   72 (229)
                      |+||||||+||||++++++|+++|     ++|++++|+..... . ...+++++.+|++|++++.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-EDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-CSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-ccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            789999999999999999999999     99999999876543 1 224688999999999999999987   9999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEE-------EEccceeeecCC--CcccCCCCccccccccCcH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKII-------YTSSFFALGSTD--GYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv-------~~sS~~~~~~~~--~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |+...   .++.+.+++|+.++.+++++|.+.+ ..+++|       |+||..+|+...  ..+.+|+.+..+  ..+.|
T Consensus        80 a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~--~~~~y  154 (364)
T 2v6g_A           80 TWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK--YMNFY  154 (364)
T ss_dssp             CCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCS--SCCHH
T ss_pred             CCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCc--cchhh
Confidence            98753   4577899999999999999998873 367887       799998888642  233444443221  13457


Q ss_pred             HHHHHHHHHHHHHHHh-cC-CCeEEEecCceecCCCC
Q 027007          143 ERSKAVADKIALQAAS-EG-LPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~-~g-i~~~~irpg~i~g~~~~  177 (229)
                          ..+|.+++++.+ ++ ++++++||+.+|||+..
T Consensus       155 ----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          155 ----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             ----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTT
T ss_pred             ----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCC
Confidence                347888888764 46 99999999999999764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.93  E-value=7.1e-27  Score=192.09  Aligned_cols=160  Identities=19%  Similarity=0.183  Sum_probs=127.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus        33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  112 (301)
T 3tjr_A           33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVV  112 (301)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5999999999999999999999999999999865433211     12368899999999999887765       68999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||...      .+.+++++.+++|+.++.++++++.+.+    ..++||++||..++.+.+.              .
T Consensus       113 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  178 (301)
T 3tjr_A          113 FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG--------------L  178 (301)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC--------------c
Confidence            99999742      2334577889999999999999987653    1359999999887754332              2


Q ss_pred             CcHHHHHHH----HHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.||..    ++.++.++.++|+++++|+||.+.++.
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  218 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL  218 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc
Confidence            459999994    455556666779999999999999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.8e-26  Score=183.22  Aligned_cols=155  Identities=17%  Similarity=0.167  Sum_probs=124.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.     ...++++|++|.+++.++++         ++|+||||
T Consensus         5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~   79 (236)
T 1ooe_A            5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   79 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEEC
Confidence            68999999999999999999999999999998765331     35678899999998877654         78999999


Q ss_pred             CcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||....       +.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.              ...|+.
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  145 (236)
T 1ooe_A           80 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS--------------MIGYGM  145 (236)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHH
T ss_pred             CcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC--------------cHHHHH
Confidence            996321       1234678899999999999999988752 259999999877643322              245999


Q ss_pred             HHHHHHHHHHHHH------hcCCCeEEEecCceecCC
Q 027007          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       145 sK~~~e~~~~~~~------~~gi~~~~irpg~i~g~~  175 (229)
                      +|...+.+.+.++      ++|+++++++||++.+|.
T Consensus       146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence            9997777766654      457999999999999884

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.93  E-value=1.7e-26  Score=185.15  Aligned_cols=186  Identities=18%  Similarity=0.118  Sum_probs=136.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccC--CChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDV--TDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~--~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+....      ...+.++.+|+  +|.+++.++++       ++
T Consensus        14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   93 (252)
T 3f1l_A           14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRL   93 (252)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999998654332111      12578899999  89988877654       68


Q ss_pred             cEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |+||||||....       +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.+.            
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------  161 (252)
T 3f1l_A           94 DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN------------  161 (252)
T ss_dssp             SEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC------------
Confidence            999999997321       223467889999999999999997653   2469999999877654322            


Q ss_pred             cccCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        ...|+.||...+.+.+.++    ++ +++++|+||.+.++..       .....  .....+...++|++.++.||-
T Consensus       162 --~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~-------~~~~~--~~~~~~~~~p~dva~~~~~L~  228 (252)
T 3f1l_A          162 --WGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMR-------ASAFP--TEDPQKLKTPADIMPLYLWLM  228 (252)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHH-------HHHCT--TCCGGGSBCTGGGHHHHHHHH
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchh-------hhhCC--ccchhccCCHHHHHHHHHHHc
Confidence              2459999996666655544    33 9999999999988742       11111  111234667888887777654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-26  Score=188.76  Aligned_cols=194  Identities=14%  Similarity=0.107  Sum_probs=137.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----------CCCCCeEEEEccCCChhhHHhhcC------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+          .....+.++++|++|.+++.++++      
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            3699999999999999999999999999999975432210          012368899999999999887765      


Q ss_pred             -CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                       ++|+||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||.. +.+.+.          
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~----------  167 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL----------  167 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc----------
Confidence             48999999996321      223567789999999999999987732   135899999986 322111          


Q ss_pred             cccccCcHHHHHHHHHHHHHH----HHhcCCCeEEEecCceecCCC--Cch---hHHHHHHhhcccceeeeehhhHhhhh
Q 027007          135 EKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK--LTT---GNLVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~----~~~~gi~~~~irpg~i~g~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                          ...|+.+|...+.+.+.    +.++|+++++++||+++||..  ...   ...... +... .+.+++..+++++.
T Consensus       168 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~-~p~~~~~~~~dvA~  241 (303)
T 1yxm_A          168 ----AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG-SFQK-IPAKRIGVPEEVSS  241 (303)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT-GGGG-STTSSCBCTHHHHH
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHH-HHhc-CcccCCCCHHHHHH
Confidence                24599999966555554    445699999999999999942  111   111111 1111 12345677888887


Q ss_pred             hhHHHH
Q 027007          206 SCKFLT  211 (229)
Q Consensus       206 ~~~~l~  211 (229)
                      ++.|+-
T Consensus       242 ~i~~l~  247 (303)
T 1yxm_A          242 VVCFLL  247 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            776653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.93  E-value=4e-26  Score=183.75  Aligned_cols=195  Identities=18%  Similarity=0.086  Sum_probs=134.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhc--------CCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDAC--------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~--------~~~d~   68 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..     ...+.++++|++|++++.+++        .++|+
T Consensus         7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~   86 (260)
T 2qq5_A            7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDV   86 (260)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceE
Confidence            68999999999999999999999999999998654322110     135788999999999886654        35799


Q ss_pred             EEEeCc--cc-----------CCCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCc
Q 027007           69 IFHTAA--LV-----------EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        69 vi~~a~--~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                      ||||||  ..           +.+.++|++.+++|+.+++++.+++.+.+   +.++||++||..++....         
T Consensus        87 lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  157 (260)
T 2qq5_A           87 LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF---------  157 (260)
T ss_dssp             EEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS---------
T ss_pred             EEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC---------
Confidence            999994  21           12334577889999999999998887543   246999999987653211         


Q ss_pred             cccccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCCCCchhH---HHHHHhhc-ccceeeeehhhHhhh
Q 027007          133 HEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGN---LVAKLQWK-KVDLVKDIFLLERMR  204 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~  204 (229)
                            ...|+.||...+.+.    .+++++|+++++|+||.+.+|.......   ........ ...+..+.+.|++++
T Consensus       158 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va  231 (260)
T 2qq5_A          158 ------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSG  231 (260)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHH
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHH
Confidence                  135999999665554    5555679999999999999987422110   00000000 011233456788888


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.|+-
T Consensus       232 ~~v~~l~  238 (260)
T 2qq5_A          232 KCVVALA  238 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            7776654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=2.4e-25  Score=174.76  Aligned_cols=151  Identities=16%  Similarity=0.143  Sum_probs=120.4

Q ss_pred             CE-EEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCCC-CCCCCC-CCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MK-ILVSGASGYLGGRLCHALL-KQGHSVRALVRRTS-DISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~-~~g~~V~~~~r~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      || ||||||+|+||++++++|+ ++|++|++++|+++ +.+.+. ...+++++++|++|.+++.++++++|+|||+||..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            45 9999999999999999999 89999999999877 655431 22478999999999999999999999999999842


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccC-cHHHHHHHHHHHHHH
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKIALQ  155 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~  155 (229)
                                   |+. +.++++++.+.+ .++||++||..+|...+....+.    .. .... .|+.+|...|.+.+.
T Consensus        85 -------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~----~~-~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A           85 -------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKW----TF-DNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             -------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHH----HH-HTSCHHHHHHHHHHHHHHHH
T ss_pred             -------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccc----cc-cccccHHHHHHHHHHHHHHh
Confidence                         444 889999998874 67999999998886543211100    00 0112 599999998887764


Q ss_pred             HHhcCCCeEEEecCceecC
Q 027007          156 AASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       156 ~~~~gi~~~~irpg~i~g~  174 (229)
                         .|+++++||||+++++
T Consensus       145 ---~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          145 ---SNLNYTILRLTWLYND  160 (221)
T ss_dssp             ---SCSEEEEEEECEEECC
T ss_pred             ---CCCCEEEEechhhcCC
Confidence               6999999999999998

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=3.3e-26  Score=182.25  Aligned_cols=155  Identities=16%  Similarity=0.129  Sum_probs=124.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC---------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------~~d~vi~~   72 (229)
                      ++|||||+|+||++++++|+++|++|++++|++++.+.     ...++++|++|.+++.++++         ++|+||||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~   83 (241)
T 1dhr_A            9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV   83 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence            69999999999999999999999999999998765331     35678899999998877664         68999999


Q ss_pred             CcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||....       +.+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+.              ...|+.
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  149 (241)
T 1dhr_A           84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG--------------MIGYGM  149 (241)
T ss_dssp             CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHH
T ss_pred             ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC--------------chHHHH
Confidence            997421       1234677899999999999999988752 259999999887654322              245999


Q ss_pred             HHHHHHHHHHHHH------hcCCCeEEEecCceecCC
Q 027007          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       145 sK~~~e~~~~~~~------~~gi~~~~irpg~i~g~~  175 (229)
                      +|...+.+.+.++      ++|+++++|+||.+.++.
T Consensus       150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence            9997777766654      457999999999998874

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=4.5e-26  Score=185.12  Aligned_cols=195  Identities=15%  Similarity=0.104  Sum_probs=137.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..     ...+.++++|++|.+++.++++       ++|+|
T Consensus        36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  115 (279)
T 3ctm_A           36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVF  115 (279)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998754322110     1367889999999999887765       48999


Q ss_pred             EEeCcccCC---C-----CCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           70 FHTAALVEP---W-----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        70 i~~a~~~~~---~-----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      |||||....   .     .+++++.+++|+.++.++++.+.+.+   ..++||++||..++.+...            ..
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------~~  183 (279)
T 3ctm_A          116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP------------QL  183 (279)
T ss_dssp             EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---------------CC
T ss_pred             EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC------------CC
Confidence            999997432   1     12456789999999877766665432   2469999999876533100            11


Q ss_pred             cCcHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ...|+.+|...+.+++.++    +++ ++++++||.+.++.............. ...+.+++..++|++.++.|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~~~~~l  257 (279)
T 3ctm_A          184 QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWW-QLTPLGREGLTQELVGGYLYL  257 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHH-HHSTTCSCBCGGGTHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHH-HhCCccCCcCHHHHHHHHHHH
Confidence            2459999997777766654    457 999999999999965322111111111 112345677888888776665

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=1.3e-25  Score=180.09  Aligned_cols=159  Identities=19%  Similarity=0.159  Sum_probs=125.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCC--CCCC---CCCCCeEEEEccCCCh-hhHHhhcC-------Cc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSD--ISGL---PSEGALELVYGDVTDY-RSLVDACF-------GC   66 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~--~~~~---~~~~~~~~~~~D~~~~-~~~~~~~~-------~~   66 (229)
                      ++++||||+|+||++++++|+++|++ |++++|+.+.  .+++   .....++++.+|++|. +++.++++       ++
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   85 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            36999999999999999999999997 9999997631  1111   1123678899999998 88766654       68


Q ss_pred             cEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |+||||||..  ..+++++.+++|+.++.++++++.+.+.      .++||++||..++.+.+.              ..
T Consensus        86 d~lv~~Ag~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  149 (254)
T 1sby_A           86 DILINGAGIL--DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------------VP  149 (254)
T ss_dssp             CEEEECCCCC--CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------SH
T ss_pred             CEEEECCccC--CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC--------------ch
Confidence            9999999974  3467889999999999999999987542      257999999887754322              24


Q ss_pred             cHHHHHHHHHHHHHHHH----hcCCCeEEEecCceecCC
Q 027007          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~gi~~~~irpg~i~g~~  175 (229)
                      .|+.||...+.+.+.++    ++|+++++++||.+.+|.
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence            59999997776665544    469999999999999985

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.93  E-value=3.2e-25  Score=181.64  Aligned_cols=158  Identities=18%  Similarity=0.245  Sum_probs=117.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc--CC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~--~~   78 (229)
                      |||||||||||||++++++|+++||+|++++|++...          .+..|    +...+.++++|.|||+|+..  ..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------RITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------EEEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------eeecc----hhhHhhccCCCEEEEeccCcccch
Confidence            9999999999999999999999999999999975421          12222    33345678899999999742  11


Q ss_pred             ---C-CCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           79 ---W-LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 ---~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                         + .......++.|+.+|.+|++++..... ..++|+.||.++|+.......+|+.+..+   ...|+..|...|...
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~---~~~~~~~~~~~e~~~  143 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD---FDFFSNLVTKWEAAA  143 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC---SSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc---cchhHHHHHHHHHHH
Confidence               1 112345788999999999999987642 34689999999999877666666665543   234666666555433


Q ss_pred             HHHHhcCCCeEEEecCceecCCC
Q 027007          154 LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       154 ~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      . ....+++++++||+.+|||+.
T Consensus       144 ~-~~~~~~~~~~~r~~~v~g~~~  165 (298)
T 4b4o_A          144 R-LPGDSTRQVVVRSGVVLGRGG  165 (298)
T ss_dssp             C-CSSSSSEEEEEEECEEECTTS
T ss_pred             H-hhccCCceeeeeeeeEEcCCC
Confidence            2 234589999999999999975

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.93  E-value=3.3e-25  Score=186.78  Aligned_cols=137  Identities=23%  Similarity=0.262  Sum_probs=119.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      |||||||||||||++++++|+++|+ +|++++|+                    +|++++.++++++|+|||+|+.... 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCC-
Confidence            9999999999999999999999998 87776653                    6788999999999999999997543 


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh-
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-  158 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-  158 (229)
                       .++.+.+++|+.++.++++++.+.+..+++|++||..+|+                  .+.|+.+|..+|.+++.+++ 
T Consensus        60 -~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~------------------~~~Y~~sK~~~E~~~~~~~~~  120 (369)
T 3st7_A           60 -EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ------------------DNPYGESKLQGEQLLREYAEE  120 (369)
T ss_dssp             -TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS------------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC------------------CCCchHHHHHHHHHHHHHHHH
Confidence             4567789999999999999999886334999999998876                  14599999999999999875 


Q ss_pred             cCCCeEEEecCceecCCCC
Q 027007          159 EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~~~  177 (229)
                      .|++++++||+++|||+..
T Consensus       121 ~g~~~~i~R~~~v~G~~~~  139 (369)
T 3st7_A          121 YGNTVYIYRWPNLFGKWCK  139 (369)
T ss_dssp             HCCCEEEEEECEEECTTCC
T ss_pred             hCCCEEEEECCceeCCCCC
Confidence            4999999999999999764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.93  E-value=1.3e-26  Score=192.19  Aligned_cols=191  Identities=20%  Similarity=0.138  Sum_probs=135.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC----------CCCCC----CC-CCCCeEEEEccCCChhhHHhhcC--
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT----------SDISG----LP-SEGALELVYGDVTDYRSLVDACF--   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~----------~~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~--   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.          +..+.    +. ....+.++++|++|.+++.++++  
T Consensus        29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  108 (322)
T 3qlj_A           29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA  108 (322)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999872          11111    00 11357889999999999877765  


Q ss_pred             -----CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---------CceEEEEccceeeecCCC
Q 027007           65 -----GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDG  124 (229)
Q Consensus        65 -----~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~iv~~sS~~~~~~~~~  124 (229)
                           ++|+||||||....      +.++|++.+++|+.+++++++++.+.+.         .++||++||..++.+...
T Consensus       109 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  188 (322)
T 3qlj_A          109 VETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG  188 (322)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTT
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCC
Confidence                 68999999997432      3346778899999999999999876532         159999999877654332


Q ss_pred             cccCCCCccccccccCcHHHHHHHH----HHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhh
Q 027007          125 YIADENQVHEEKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLL  200 (229)
Q Consensus       125 ~~~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (229)
                                    ...|+.||+..    +.++.+++++||++++|+|| +.++..........   . ......+...+
T Consensus       189 --------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~-~~~~~~~~~~p  249 (322)
T 3qlj_A          189 --------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---A-TQDQDFDAMAP  249 (322)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------CCTTCG
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---h-ccccccCCCCH
Confidence                          23599999954    45555666789999999999 77775432111000   0 01111234578


Q ss_pred             HhhhhhhHHHH
Q 027007          201 ERMRHSCKFLT  211 (229)
Q Consensus       201 ~~~~~~~~~l~  211 (229)
                      +|++.++.||-
T Consensus       250 edva~~v~~L~  260 (322)
T 3qlj_A          250 ENVSPLVVWLG  260 (322)
T ss_dssp             GGTHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            88887776654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.93  E-value=1.8e-26  Score=185.58  Aligned_cols=195  Identities=17%  Similarity=0.167  Sum_probs=141.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------
Q 027007            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      ++|||||+|+||++++++|++   +|++|++++|+.++.+.+.       ....+.++++|++|++++.++++       
T Consensus         8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   87 (259)
T 1oaa_A            8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccc
Confidence            589999999999999999999   8999999999864332211       12357889999999998876653       


Q ss_pred             --Ccc--EEEEeCcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcCC-----CceEEEEccceeeecCCCcc
Q 027007           65 --GCH--VIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYI  126 (229)
Q Consensus        65 --~~d--~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~  126 (229)
                        ++|  +||||||....         +.++|++.+++|+.++.++++++.+.+.     .++||++||..++.+.+.  
T Consensus        88 ~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  165 (259)
T 1oaa_A           88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG--  165 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT--
T ss_pred             cccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC--
Confidence              357  99999997421         2245778899999999999999988753     247999999987654322  


Q ss_pred             cCCCCccccccccCcHHHHHHHHHHHHHHHHhc--CCCeEEEecCceecCCCCchh-----HHHHHHhhcccceeeeehh
Q 027007          127 ADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTG-----NLVAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       127 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--gi~~~~irpg~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~  199 (229)
                                  ...|+.||...+.+.+.++.+  ++++++|+||.+.++......     ......+ ....+.+++..
T Consensus       166 ------------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~  232 (259)
T 1oaa_A          166 ------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL-QKLKSDGALVD  232 (259)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH-HHHHHTTCSBC
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHH-HHhhhcCCcCC
Confidence                        245999999888877776532  499999999999887521100     0001111 11122456778


Q ss_pred             hHhhhhhhHHHH
Q 027007          200 LERMRHSCKFLT  211 (229)
Q Consensus       200 ~~~~~~~~~~l~  211 (229)
                      |++++.++.|+-
T Consensus       233 p~dvA~~v~~l~  244 (259)
T 1oaa_A          233 CGTSAQKLLGLL  244 (259)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            889888877664

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.92  E-value=2.7e-25  Score=179.79  Aligned_cols=195  Identities=14%  Similarity=0.076  Sum_probs=139.2

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCCCCC-CCCCC--CCCeEEEEccCCChhhHHhhcC----------Cc
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPS--EGALELVYGDVTDYRSLVDACF----------GC   66 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~----------~~   66 (229)
                      ++|||||  +|+||++++++|+++|++|++++|+.++. +.+..  ...+.++++|++|++++.++++          ++
T Consensus         9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~i   88 (269)
T 2h7i_A            9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKL   88 (269)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCE
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCc
Confidence            5899999  99999999999999999999999986431 11111  1256789999999999877765          78


Q ss_pred             cEEEEeCcccC-------C----CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccc
Q 027007           67 HVIFHTAALVE-------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        67 d~vi~~a~~~~-------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      |+||||||...       +    +.++|++.+++|+.+++++++++.+.+. .++||++||...++.. .          
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~-~----------  157 (269)
T 2h7i_A           89 DGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-A----------  157 (269)
T ss_dssp             EEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT-T----------
T ss_pred             eEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC-c----------
Confidence            99999999743       1    2235677899999999999999988752 2599999987543211 1          


Q ss_pred             cccccCcHHHHHHHHH----HHHHHHHhcCCCeEEEecCceecCCCCch------hHHH---HHH--hhcccceee-eeh
Q 027007          135 EKYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLV---AKL--QWKKVDLVK-DIF  198 (229)
Q Consensus       135 ~~~~~~~Y~~sK~~~e----~~~~~~~~~gi~~~~irpg~i~g~~~~~~------~~~~---~~~--~~~~~~~~~-~~~  198 (229)
                          ...|+.||...+    .++.+++++|+++++|+||.+.++.....      ....   ...  .+....+.+ +++
T Consensus       158 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~  233 (269)
T 2h7i_A          158 ----YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK  233 (269)
T ss_dssp             ----THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCC
Confidence                245999999554    45556666799999999999988742110      1000   000  111122345 578


Q ss_pred             hhHhhhhhhHHHH
Q 027007          199 LLERMRHSCKFLT  211 (229)
Q Consensus       199 ~~~~~~~~~~~l~  211 (229)
                      .|+|++.++.||-
T Consensus       234 ~p~dvA~~v~~L~  246 (269)
T 2h7i_A          234 DATPVAKTVCALL  246 (269)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHh
Confidence            8999998887764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.7e-25  Score=185.55  Aligned_cols=161  Identities=25%  Similarity=0.242  Sum_probs=121.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCC-----CCCCeEEEEccCCChhhHHhhcC-------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLP-----SEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.....     .+.     ....+.++++|++|.+++.++++       
T Consensus         7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g   86 (324)
T 3u9l_A            7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDG   86 (324)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999742211     110     01368899999999999988776       


Q ss_pred             CccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           65 GCHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        65 ~~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      ++|+||||||...      .+.+++++.+++|+.|+.++++++.+.+   +.++||++||..++.....           
T Consensus        87 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~-----------  155 (324)
T 3u9l_A           87 RIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP-----------  155 (324)
T ss_dssp             CCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-----------
Confidence            7999999999632      1334577889999999999999996653   3469999999877633211           


Q ss_pred             ccccCcHHHHHHHHHHHH----HHHHhcCCCeEEEecCceecCC
Q 027007          136 KYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~----~~~~~~gi~~~~irpg~i~g~~  175 (229)
                        ....|+.||...+.+.    .+++++|+++++|+||.+.++.
T Consensus       156 --~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          156 --YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             --cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence              1245999999665555    4555679999999999998765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=6.1e-26  Score=183.87  Aligned_cols=161  Identities=14%  Similarity=0.062  Sum_probs=124.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.     ....+.++++|++|.+++.++++       ++|+|
T Consensus        33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l  112 (272)
T 1yb1_A           33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL  112 (272)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            6999999999999999999999999999999764332210     01368899999999998877764       68999


Q ss_pred             EEeCcccCCC------CCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||.....      .+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ..
T Consensus       113 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  178 (272)
T 1yb1_A          113 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------------LL  178 (272)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------------HH
T ss_pred             EECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------------ch
Confidence            9999974321      23466789999999999999887642   3469999999987654221              24


Q ss_pred             cHHHHHHHHHHHHHHHH-------hcCCCeEEEecCceecCCC
Q 027007          141 QYERSKAVADKIALQAA-------SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~-------~~gi~~~~irpg~i~g~~~  176 (229)
                      .|+.+|...+.+++.++       +.|+++++|+||++.++..
T Consensus       179 ~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~  221 (272)
T 1yb1_A          179 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  221 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc
Confidence            59999997766665543       3489999999999999874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.92  E-value=3e-25  Score=179.01  Aligned_cols=165  Identities=17%  Similarity=0.145  Sum_probs=128.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHhhcC---------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACF---------   64 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~---------   64 (229)
                      +++|||||+|+||++++++|+++|   ++|++++|+.++.+.+..    ..++.++.+|++|.+++.++++         
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~  101 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ  101 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            369999999999999999999999   999999998765432211    2368899999999999888776         


Q ss_pred             CccEEEEeCcccC-C------CCCCchhhhHhhHHHHHHHHHHHHhcCC--------------CceEEEEccceeeecCC
Q 027007           65 GCHVIFHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETKT--------------VEKIIYTSSFFALGSTD  123 (229)
Q Consensus        65 ~~d~vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------------~~~iv~~sS~~~~~~~~  123 (229)
                      ++|+||||||... .      +.+++++.+++|+.++.++++++.+.+.              .++||++||..++.+..
T Consensus       102 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  181 (267)
T 1sny_A          102 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN  181 (267)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC
T ss_pred             CccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC
Confidence            7999999999743 1      2235667899999999999999876531              36899999988765432


Q ss_pred             CcccCCCCccccccccCcHHHHHHHHHHHHHHH----HhcCCCeEEEecCceecCCC
Q 027007          124 GYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..           .....|+.+|+..+.+++.+    .++|+++++++||++.++..
T Consensus       182 ~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          182 TD-----------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             CS-----------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             CC-----------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC
Confidence            00           01245999999776666554    45699999999999999864

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=3.6e-26  Score=182.42  Aligned_cols=189  Identities=20%  Similarity=0.185  Sum_probs=119.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHH---hh---cCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV---DA---CFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~---~~---~~~~d~vi~~a~~   75 (229)
                      ++|||||+|+||++++++|++ |++|++++|+.++.+.+....++.++++|+++.++..   +.   +.++|+||||||.
T Consensus         7 ~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~   85 (245)
T 3e9n_A            7 IAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAV   85 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC--
T ss_pred             EEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            589999999999999999987 8999999998654433222346889999998875421   11   2368999999997


Q ss_pred             cCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      ...      +.+++++.+++|+.++.++++++.+.+.  .++||++||..++.+.+.              ...|+.||.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~asK~  151 (245)
T 3e9n_A           86 ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPG--------------NTIYAASKH  151 (245)
T ss_dssp             --------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------------------------CHHHHHHHH
T ss_pred             CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCC--------------chHHHHHHH
Confidence            432      2235678899999999999999876531  259999999988765432              245999999


Q ss_pred             HHHHHH----HHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          148 VADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       148 ~~e~~~----~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      ..+.+.    .++.++|+++++++||.+.++.........     .......++..++|++.++.|+
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~p~dvA~~i~~l  213 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ-----GTNFRPEIYIEPKEIANAIRFV  213 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------CCGGGSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh-----hcccccccCCCHHHHHHHHHHH
Confidence            665555    455567999999999999998642211110     0111123456777777776654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=9.5e-26  Score=183.28  Aligned_cols=196  Identities=19%  Similarity=0.195  Sum_probs=132.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.       ....+.++++|++|++++.++++       ++|
T Consensus        34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  113 (279)
T 1xg5_A           34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD  113 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence            6899999999999999999999999999999764332211       01257789999999999887765       689


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C--CceEEEEccceeeecCCCcccCCCCccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +||||||....      +.+++++.+++|+.++.++++.+.+.+   .  .++||++||..++...+.            
T Consensus       114 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~------------  181 (279)
T 1xg5_A          114 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------------  181 (279)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC------------
Confidence            99999996422      223567789999999777666654432   2  269999999876632111            


Q ss_pred             cccCcHHHHHHHHHHH----HHHHH--hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKAVADKI----ALQAA--SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~----~~~~~--~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .....|+.+|...+.+    ++++.  ..|+++++|+||.+.++................. ...++..++|++.++.|+
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~dvA~~i~~l  260 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-EQMKCLKPEDVAEAVIYV  260 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-C---CBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhc-ccccCCCHHHHHHHHHHH
Confidence            1124599999965554    45555  5689999999999998852100000000111111 123456777777766554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=6.6e-26  Score=181.88  Aligned_cols=193  Identities=16%  Similarity=0.140  Sum_probs=129.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHH----hhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLV----DACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~----~~~~~~d~vi~~   72 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+..    ...+..+  |..+.+.+.    +.+.++|+||||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            158999999999999999999999999999998654332110    1123332  444433322    223479999999


Q ss_pred             Cccc-CC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||.. ..      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+.              ...|
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  145 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------LSTY  145 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------CHHH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC--------------chHH
Confidence            9975 21      223577889999999999999987653   2469999999877644322              2459


Q ss_pred             HHHHHHHHHH----HHHHHhcCCCeEEEecCceecCCCCch---------hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          143 ERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTT---------GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       143 ~~sK~~~e~~----~~~~~~~gi~~~~irpg~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      +.||...+.+    +.++.++|+++++|+||.++||.....         ...... . ....+.++...++|++.++.|
T Consensus       146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~-~-~~~~p~~~~~~p~dvA~~v~~  223 (254)
T 1zmt_A          146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAH-V-KKVTALQRLGTQKELGELVAF  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHH-H-HHHSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHH-H-hccCCCCCCcCHHHHHHHHHH
Confidence            9999955544    455556799999999999976643211         111111 1 111234567788888887766


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      +-
T Consensus       224 l~  225 (254)
T 1zmt_A          224 LA  225 (254)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=1.5e-25  Score=181.09  Aligned_cols=195  Identities=14%  Similarity=0.114  Sum_probs=137.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|++ +|++|++++|+.++.+..    . ....++++.+|++|.+++.++++       ++|
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3699999999999999999999 999999999975432211    0 01357889999999999888776       799


Q ss_pred             EEEEeCcccCCC------CCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCC--c---------ccCC
Q 027007           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDG--Y---------IADE  129 (229)
Q Consensus        68 ~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~--~---------~~~~  129 (229)
                      +||||||.....      .+++++.+++|+.++.++++++.+.+. .++||++||..++.+...  +         ..+|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            999999974321      134567899999999999999998752 249999999877643100  0         0000


Q ss_pred             CCc----------------cccccccCcHHHHHHHHHHHHH----HHHh----cCCCeEEEecCceecCCCCchhHHHHH
Q 027007          130 NQV----------------HEEKYFCTQYERSKAVADKIAL----QAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAK  185 (229)
Q Consensus       130 ~~~----------------~~~~~~~~~Y~~sK~~~e~~~~----~~~~----~gi~~~~irpg~i~g~~~~~~~~~~~~  185 (229)
                      ..+                ..+..+...|+.||.+.+.+++    ++.+    +|+++++++||++.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            000                0000112579999986665554    4444    58999999999999986421       


Q ss_pred             HhhcccceeeeehhhHhhhhhhHHHH
Q 027007          186 LQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                               .+...+++++.+..|+-
T Consensus       238 ---------~~~~~~~~~a~~~~~l~  254 (276)
T 1wma_A          238 ---------KATKSPEEGAETPVYLA  254 (276)
T ss_dssp             ---------TCSBCHHHHTHHHHHHH
T ss_pred             ---------cccCChhHhhhhHhhhh
Confidence                     12456777776665543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.92  E-value=7.6e-26  Score=180.58  Aligned_cols=187  Identities=17%  Similarity=0.140  Sum_probs=135.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------CCCCeEEEEccC--CChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDV--TDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~--~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+.      ....+.++.+|+  +|.+++.++++       ++
T Consensus        16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~i   95 (247)
T 3i1j_A           16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRL   95 (247)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999865432211      112456777777  88888776654       68


Q ss_pred             cEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      |+||||||....       +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.            
T Consensus        96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  163 (247)
T 3i1j_A           96 DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN------------  163 (247)
T ss_dssp             SEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC------------
Confidence            999999997422       224577889999999999999997653   2359999999876654332            


Q ss_pred             cccCcHHHHHHHHHHHH----HHHHh-cCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          137 YFCTQYERSKAVADKIA----LQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~----~~~~~-~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        ...|+.+|...+.+.    .++.. +|+++++|+||.+.++..       ......  ....+...|+|++.++.||-
T Consensus       164 --~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-------~~~~~~--~~~~~~~~p~dva~~~~~l~  232 (247)
T 3i1j_A          164 --WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-------AQAYPD--ENPLNNPAPEDIMPVYLYLM  232 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-------HHHSTT--SCGGGSCCGGGGTHHHHHHH
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-------hhcccc--cCccCCCCHHHHHHHHHHHh
Confidence              245999999665555    44544 689999999999988742       111111  11124566888887777664

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.92  E-value=8.4e-25  Score=177.89  Aligned_cols=145  Identities=25%  Similarity=0.293  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      |+||||||+||||++++++|+++  |++|++++|++++.+.+.. .+++++.+|++|++++.++++++|+|||+|+..  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~--   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH--   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC--
Confidence            78999999999999999999999  9999999998755432211 367899999999999999999999999999852  


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                          +..  ++|+.++.++++++.+.+ .++||++||..++..                 ...|+.+|..+|.+++.   
T Consensus        78 ----~~~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~E~~~~~---  130 (287)
T 2jl1_A           78 ----YDN--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEES-----------------IIPLAHVHLATEYAIRT---  130 (287)
T ss_dssp             ----SCH--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGGC-----------------CSTHHHHHHHHHHHHHH---
T ss_pred             ----cCc--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------CCchHHHHHHHHHHHHH---
Confidence                111  679999999999998874 689999999876521                 12499999999998864   


Q ss_pred             cCCCeEEEecCceecCC
Q 027007          159 EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~~  175 (229)
                      .|++++++||+.++++.
T Consensus       131 ~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          131 TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             TTCCEEEEEECCBHHHH
T ss_pred             cCCCeEEEECCEecccc
Confidence            68999999999998875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=5.9e-25  Score=177.49  Aligned_cols=158  Identities=18%  Similarity=0.154  Sum_probs=125.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC---CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +.   ....+.++++|++|++++.++++       ++|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (267)
T 2gdz_A            9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   88 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999997543211    11   12357889999999999877765       479


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      +||||||...  .++|++.+++|+.++.++++.+.+.+.      .++||++||..++.+.+.              ...
T Consensus        89 ~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  152 (267)
T 2gdz_A           89 ILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ--------------QPV  152 (267)
T ss_dssp             EEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------CHH
T ss_pred             EEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC--------------Cch
Confidence            9999999753  467889999999999888887765432      368999999987754322              234


Q ss_pred             HHHHHHHHHHHHHH------HHhcCCCeEEEecCceecCC
Q 027007          142 YERSKAVADKIALQ------AASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~~~e~~~~~------~~~~gi~~~~irpg~i~g~~  175 (229)
                      |+.||...+.+.+.      +.++|+++++|+||.+.+|.
T Consensus       153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            99999977766553      45679999999999999875

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.92  E-value=1.7e-26  Score=184.24  Aligned_cols=194  Identities=14%  Similarity=0.089  Sum_probs=130.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-E--cCCCCCCCCCCC-CCeEEEEccCCChhhH----HhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-V--RRTSDISGLPSE-GALELVYGDVTDYRSL----VDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~--r~~~~~~~~~~~-~~~~~~~~D~~~~~~~----~~~~~~~d~vi~~   72 (229)
                      +++|||||+|+||++++++|+++|++|+++ +  |+.++.+.+... .+....  |..+.+.+    .+.+.++|+||||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            468999999999999999999999999999 5  875433221100 022221  33333222    2223468999999


Q ss_pred             CcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           73 AALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        73 a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||....         +.++|++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.              ..
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~  145 (244)
T 1zmo_A           80 DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY--------------NP  145 (244)
T ss_dssp             CCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------CT
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC--------------ch
Confidence            997432         123567789999999999999997653   2469999999877654322              24


Q ss_pred             cHHHHHHHHHH----HHHHHHhcCCCeEEEecCceecCCC---Cchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGK---LTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~gi~~~~irpg~i~g~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||...+.    ++.++.++|+++++|+||.+.++..   ....  ....... ....+.++...|++++.++.|+-
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~p~~r~~~pe~vA~~v~~l~  224 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERV-DRDVPLGRLGRPDEMGALITFLA  224 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHH-HHHCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHH-hcCCCCCCCcCHHHHHHHHHHHc
Confidence            59999995554    4555666799999999999999974   2111  1111111 10123456788999988877664

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.92  E-value=2e-25  Score=180.12  Aligned_cols=197  Identities=15%  Similarity=0.067  Sum_probs=144.0

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCCCCC-CC----CC--CCCCeEEEEccCCChhhHHhhcC-------C
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP--SEGALELVYGDVTDYRSLVDACF-------G   65 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~----~~--~~~~~~~~~~D~~~~~~~~~~~~-------~   65 (229)
                      ++|||||+  ++||++++++|+++|++|++++|+..+. ++    +.  ....+.++++|++|.+++.++++       +
T Consensus        22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999  9999999999999999999999876542 11    10  02368889999999999877765       5


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +|+||||||....      +.+++++.+++|+.++.++++++.+.+   +.++||++||..++.....+           
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  170 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ-----------  170 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS-----------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC-----------
Confidence            7999999997432      224577889999999999999986643   24699999998765432110           


Q ss_pred             cccCcHHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ....|+.||+..+.+++.++.+   .+++++++||.+.++.......... ..+....+.++++.++|++.++.|+-
T Consensus       171 -~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~r~~~~~dva~~~~~l~  246 (267)
T 3gdg_A          171 -EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQ-QLWHSMIPMGRDGLAKELKGAYVYFA  246 (267)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHH-HHHHTTSTTSSCEETHHHHHHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHH-HHHHhcCCCCCCcCHHHHHhHhheee
Confidence             1245999999776666655421   2899999999999987533222222 22334445678888999988877654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.92  E-value=2.5e-25  Score=184.85  Aligned_cols=161  Identities=20%  Similarity=0.117  Sum_probs=124.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----------CCCCeEEEEccCCChhhHHhhcCC-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFG-----   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~-----   65 (229)
                      +||||||+|+||++++++|+++|++|++++|+..+.+...           ....+.++++|++|.+++.++++.     
T Consensus         4 ~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g~   83 (327)
T 1jtv_A            4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (327)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999988755433221           113688999999999999888764     


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +|+||||||....      +.+++++.+++|+.++.++++++.+.+   ..++||++||..++.+.+.            
T Consensus        84 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~------------  151 (327)
T 1jtv_A           84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF------------  151 (327)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT------------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC------------
Confidence            8999999996321      223577889999999999999986543   3469999999877644321            


Q ss_pred             cccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCCC
Q 027007          137 YFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~~  176 (229)
                        ...|+.||...+.+.+    ++.++|+++++|+||.+.++..
T Consensus       152 --~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          152 --NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             --ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence              2459999996665554    4556799999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.92  E-value=1.5e-25  Score=193.46  Aligned_cols=195  Identities=16%  Similarity=0.153  Sum_probs=141.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCCCCCCeEEEEccCCChhhHHhhcC--------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~~d~vi~   71 (229)
                      ++|||||+|+||+++++.|+++|++|++++|+...  ........+++++++|++|.+++.++++        .+|+|||
T Consensus       215 ~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~  294 (454)
T 3u0b_A          215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVN  294 (454)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEE
T ss_pred             EEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEE
Confidence            68999999999999999999999999999986421  1111111245789999999998877654        3899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.+++++.+++.+.+   ..++||++||..++.+..+.              ..|
T Consensus       295 nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~--------------~~Y  360 (454)
T 3u0b_A          295 NAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ--------------TNY  360 (454)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC--------------HHH
T ss_pred             CCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC--------------HHH
Confidence            9997432      334677889999999999999998864   23599999998876554332              449


Q ss_pred             HHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.+|.    +++.++.++.++|+++++|+||.+.+++.......... .......+.+.+.++|++.++.|+.
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~l~r~g~pedvA~~v~fL~  432 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNSLFQGGQPVDVAELIAYFA  432 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH-HHHHSBTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH-HHHhhccccCCCCHHHHHHHHHHHh
Confidence            99999    66677777777899999999999999875332211111 1122333456778899888887764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=1.6e-23  Score=166.11  Aligned_cols=182  Identities=15%  Similarity=0.169  Sum_probs=121.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      +||||||+|+||++++++|+++| ++|++++|++++.+.+.. ..++++++|++|++++.++++++|+|||+++..    
T Consensus        25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~----   99 (236)
T 3qvo_A           25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE----   99 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCST----
T ss_pred             EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----
Confidence            69999999999999999999999 899999999876655433 378999999999999999999999999999741    


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcC
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~g  160 (229)
                       +.       ...+.++++++.+.+ .++||++||..+|+..+....+......     ..+...+..+|..+   .+.|
T Consensus       100 -~~-------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l---~~~g  162 (236)
T 3qvo_A          100 -DL-------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVI-----GEPLKPFRRAADAI---EASG  162 (236)
T ss_dssp             -TH-------HHHHHHHHHHHHHTT-CCEEEEECCCCC---------------------CGGGHHHHHHHHHH---HTSC
T ss_pred             -ch-------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcc-----cchHHHHHHHHHHH---HHCC
Confidence             11       134668888888874 6799999999998765432211111100     11223333333332   3569


Q ss_pred             CCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          161 LPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       161 i~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      +++++||||.++++......     ..........++..++|++.++.++
T Consensus       163 i~~~~vrPg~i~~~~~~~~~-----~~~~~~~~~~~~i~~~DvA~~i~~l  207 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDIIDYE-----LTSRNEPFKGTIVSRKSVAALITDI  207 (236)
T ss_dssp             SEEEEEEECEEECCSCCCCE-----EECTTSCCSCSEEEHHHHHHHHHHH
T ss_pred             CCEEEEeCCcccCCCCcceE-----EeccCCCCCCcEECHHHHHHHHHHH
Confidence            99999999999998542110     0011111123456677777665554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.91  E-value=1.4e-23  Score=171.97  Aligned_cols=195  Identities=10%  Similarity=0.106  Sum_probs=131.4

Q ss_pred             EEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcC-----------CCCCCCC---CCCC---CeEEEEcc--------CC
Q 027007            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRR-----------TSDISGL---PSEG---ALELVYGD--------VT   54 (229)
Q Consensus         2 ~vlItGg~--G~iG~~l~~~l~~~g~~V~~~~r~-----------~~~~~~~---~~~~---~~~~~~~D--------~~   54 (229)
                      ++|||||+  |+||++++++|+++|++|++++|+           .++.+.+   ....   ....+.+|        ++
T Consensus        10 ~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhh
Confidence            68999999  999999999999999999999853           2222221   1100   12333433        22


Q ss_pred             ----C--------hhhHHhhc-------CCccEEEEeCcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-
Q 027007           55 ----D--------YRSLVDAC-------FGCHVIFHTAALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (229)
Q Consensus        55 ----~--------~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (229)
                          |        .+++.+++       .++|+||||||...        .+.++|++.+++|+.+++++++++.+.+. 
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  169 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence                2        34444443       36899999998531        12245778899999999999999998753 


Q ss_pred             CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH----HHHHHHHHh-cCCCeEEEecCceecCCCCch--
Q 027007          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA----DKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--  179 (229)
Q Consensus       107 ~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~--  179 (229)
                      .++||++||..++.+.+..             ...|+.||...    +.++.++++ +|+++++|+||++.+|+....  
T Consensus       170 ~g~iv~isS~~~~~~~~~~-------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~  236 (297)
T 1d7o_A          170 GGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             CceEEEEeccccccCCCCc-------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc
Confidence            2599999998765432211             12499999954    455556664 799999999999999975432  


Q ss_pred             -hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          180 -GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       180 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                       ..+... ... ..+.++.+.|++++.++.|+-
T Consensus       237 ~~~~~~~-~~~-~~p~~r~~~pedvA~~v~~l~  267 (297)
T 1d7o_A          237 IDTMIEY-SYN-NAPIQKTLTADEVGNAAAFLV  267 (297)
T ss_dssp             HHHHHHH-HHH-HSSSCCCBCHHHHHHHHHHHT
T ss_pred             cHHHHHH-hhc-cCCCCCCCCHHHHHHHHHHHh
Confidence             111111 111 123467788999988877653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.90  E-value=2.4e-23  Score=169.57  Aligned_cols=146  Identities=19%  Similarity=0.274  Sum_probs=113.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      |+||||||||+||++++++|+++ |++|++++|++++...+.. .+++++++|++|++++.++++++|+|||+|+.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            89999999999999999999998 8999999998876554322 37899999999999999999999999999986321 


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                             ...|+.++.++++++.+.+ .++||++||...   ....      +       ..+...+..+|...   ...
T Consensus        79 -------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~~~~------~-------~~~~~~~~~~e~~~---~~~  131 (289)
T 3e48_A           79 -------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---QHNN------P-------FHMSPYFGYASRLL---STS  131 (289)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---STTC------C-------STTHHHHHHHHHHH---HHH
T ss_pred             -------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---CCCC------C-------CccchhHHHHHHHH---HHc
Confidence                   2458999999999999885 789999998432   1100      0       01222222333332   346


Q ss_pred             CCCeEEEecCceecCC
Q 027007          160 GLPIVPVYPGVIYGPG  175 (229)
Q Consensus       160 gi~~~~irpg~i~g~~  175 (229)
                      |++++++|||+++|+.
T Consensus       132 g~~~~ilrp~~~~~~~  147 (289)
T 3e48_A          132 GIDYTYVRMAMYMDPL  147 (289)
T ss_dssp             CCEEEEEEECEESTTH
T ss_pred             CCCEEEEecccccccc
Confidence            8999999999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.90  E-value=1.2e-24  Score=178.75  Aligned_cols=175  Identities=18%  Similarity=0.161  Sum_probs=127.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEccCCCh-hhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDY-RSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~D~~~~-~~~~~~~~-------~~d   67 (229)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.    +.  ....+.++++|++|. +++.++++       ++|
T Consensus        14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD   93 (311)
T 3o26_A           14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLD   93 (311)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999999999998653221    11  113688999999998 77765543       799


Q ss_pred             EEEEeCcccCC------------------------------------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCc
Q 027007           68 VIFHTAALVEP------------------------------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVE  108 (229)
Q Consensus        68 ~vi~~a~~~~~------------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~  108 (229)
                      +||||||....                                    +.+++++.+++|+.++.++++++.+.+   ..+
T Consensus        94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~  173 (311)
T 3o26_A           94 ILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP  173 (311)
T ss_dssp             EEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC
T ss_pred             EEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCC
Confidence            99999997421                                    123456679999999999999998753   235


Q ss_pred             eEEEEccceeeecCCCcc------cCCC-----------------------CccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007          109 KIIYTSSFFALGSTDGYI------ADEN-----------------------QVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus       109 ~iv~~sS~~~~~~~~~~~------~~~~-----------------------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                      +||++||..++.+.....      .+..                       ...........|+.||++.+.+++.++.+
T Consensus       174 ~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e  253 (311)
T 3o26_A          174 RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANK  253 (311)
T ss_dssp             EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhh
Confidence            999999987654321000      0000                       00000012356999999888888887643


Q ss_pred             --CCCeEEEecCceecCCC
Q 027007          160 --GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       160 --gi~~~~irpg~i~g~~~  176 (229)
                        ++++++|+||++.++..
T Consensus       254 ~~~i~v~~v~PG~v~T~~~  272 (311)
T 3o26_A          254 IPKFQVNCVCPGLVKTEMN  272 (311)
T ss_dssp             CTTSEEEEECCCSBCSGGG
T ss_pred             cCCceEEEecCCceecCCc
Confidence              69999999999999864

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.90  E-value=1.1e-24  Score=177.63  Aligned_cols=161  Identities=18%  Similarity=0.144  Sum_probs=123.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+.+..      ...+.++.+|++|.+++.++++       ++|
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998654332110      1257889999999998877664       689


Q ss_pred             EEEEe-CcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC--CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           68 VIFHT-AALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        68 ~vi~~-a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||| |+....     +.+++++.+++|+.++.++++++.+.+  ..++||++||..++.+.+.              .
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  174 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM--------------V  174 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT--------------C
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC--------------c
Confidence            99999 565322     123456789999999999999987753  1359999999876644321              2


Q ss_pred             CcHHHHHHHHHHHHH----HH--HhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIAL----QA--ASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~--~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.||...+.+++    ++  ...++++++++||.+.++.
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence            459999996665554    44  2458999999999998874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.89  E-value=1.8e-23  Score=171.14  Aligned_cols=152  Identities=20%  Similarity=0.210  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      |+||||||||+||++++++|+++| ++|++++|++++..  .+. ..+++++++|++|++++.++++++|+|||+++...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            479999999999999999999998 99999999865421  111 13678999999999999999999999999997532


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      .      ...+.|+.++.++++++.+.+ .++||++||..+++...+.            +...|+.+|..+|.++++  
T Consensus        85 ~------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~~------------~~~~y~~sK~~~e~~~~~--  143 (299)
T 2wm3_A           85 S------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAGR------------LAAAHFDGKGEVEEYFRD--  143 (299)
T ss_dssp             H------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTTS------------CCCHHHHHHHHHHHHHHH--
T ss_pred             c------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCCc------------ccCchhhHHHHHHHHHHH--
Confidence            1      124678889999999998874 6899997776655432111            124599999999988775  


Q ss_pred             hcCCCeEEEecCceecCC
Q 027007          158 SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~  175 (229)
                       .|++++++||+++||+.
T Consensus       144 -~gi~~~ilrp~~~~~~~  160 (299)
T 2wm3_A          144 -IGVPMTSVRLPCYFENL  160 (299)
T ss_dssp             -HTCCEEEEECCEEGGGG
T ss_pred             -CCCCEEEEeecHHhhhc
Confidence             48999999999999975

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.89  E-value=2.1e-23  Score=169.39  Aligned_cols=142  Identities=22%  Similarity=0.253  Sum_probs=113.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      +||||||+||||++++++|+++  |++|++++|++++.+.+.. .+++++.+|++|++++.++++++|+|||+|+...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            5899999999999999999998  9999999998765432211 2678899999999999999999999999998521  


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (229)
                              +.|+.++.++++++.+.+ .++||++||..++.   .              ...|+.+|..+|.++++   .
T Consensus        78 --------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~---~--------------~~~y~~sK~~~e~~~~~---~  128 (286)
T 2zcu_A           78 --------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT---S--------------PLGLADEHIETEKMLAD---S  128 (286)
T ss_dssp             ------------CHHHHHHHHHHHHT-CCEEEEEEETTTTT---C--------------CSTTHHHHHHHHHHHHH---H
T ss_pred             --------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC---C--------------cchhHHHHHHHHHHHHH---c
Confidence                    247889999999998875 68999999987651   0              12499999999998865   5


Q ss_pred             CCCeEEEecCceecCC
Q 027007          160 GLPIVPVYPGVIYGPG  175 (229)
Q Consensus       160 gi~~~~irpg~i~g~~  175 (229)
                      |++++++||+.++++.
T Consensus       129 ~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          129 GIVYTLLRNGWYSENY  144 (286)
T ss_dssp             CSEEEEEEECCBHHHH
T ss_pred             CCCeEEEeChHHhhhh
Confidence            8999999999877653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.89  E-value=5.9e-24  Score=176.72  Aligned_cols=161  Identities=12%  Similarity=0.038  Sum_probs=121.0

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCC---------CCCCCC----C----CCCCeEEEEccCCCh--h---
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRT---------SDISGL----P----SEGALELVYGDVTDY--R---   57 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~----~----~~~~~~~~~~D~~~~--~---   57 (229)
                      ++|||||++  +||++++++|+++|++|++.+|++         ++.+..    .    ....+.++.+|+++.  +   
T Consensus         4 ~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   83 (329)
T 3lt0_A            4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhh
Confidence            589999875  999999999999999999777543         111110    0    112467889999887  6   


Q ss_pred             ---------------hHHhhcC-------CccEEEEeCcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcCCC
Q 027007           58 ---------------SLVDACF-------GCHVIFHTAALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (229)
Q Consensus        58 ---------------~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (229)
                                     ++.++++       ++|+||||||+..        .+.++|++.+++|+.++.++++++.+.+..
T Consensus        84 ~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~  163 (329)
T 3lt0_A           84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP  163 (329)
T ss_dssp             HHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence                           6655443       5899999998631        122457788999999999999999987632


Q ss_pred             -ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecCC
Q 027007          108 -EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       108 -~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~~  175 (229)
                       ++||++||..++.+.+...             ..|+.||+    +++.++.++.+ +|+++++|+||++.++.
T Consensus       164 ~g~Iv~isS~~~~~~~~~~~-------------~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~  224 (329)
T 3lt0_A          164 QSSIISLTYHASQKVVPGYG-------------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             EEEEEEEECGGGTSCCTTCT-------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred             CCeEEEEeCccccCCCCcch-------------HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence             5999999987665433221             14999998    55666777777 89999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.89  E-value=3.1e-23  Score=175.28  Aligned_cols=198  Identities=12%  Similarity=-0.050  Sum_probs=141.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCCCCCCCC----------------C-CCCCeEEEEccCCChhhHHhh-
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----------------P-SEGALELVYGDVTDYRSLVDA-   62 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~----------------~-~~~~~~~~~~D~~~~~~~~~~-   62 (229)
                      ++|||||+++||+++++.|++ +|++|++++|+.+..+..                . ....+..+.+|++|.+++.++ 
T Consensus        63 vaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  142 (422)
T 3s8m_A           63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVI  142 (422)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            589999999999999999999 999999999987654421                0 113577899999999887554 


Q ss_pred             ------c-CCccEEEEeCccc----------------------------------------CCCCCCchhhhHhhHHHHH
Q 027007           63 ------C-FGCHVIFHTAALV----------------------------------------EPWLPDPSRFFAVNVEGLK   95 (229)
Q Consensus        63 ------~-~~~d~vi~~a~~~----------------------------------------~~~~~~~~~~~~~n~~~~~   95 (229)
                            + .++|+||||||..                                        +.+.++|+..+++|..+++
T Consensus       143 ~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~  222 (422)
T 3s8m_A          143 ELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDW  222 (422)
T ss_dssp             HHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHH
Confidence                  3 5689999999851                                        0122346667888877776


Q ss_pred             -HHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEe
Q 027007           96 -NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVY  167 (229)
Q Consensus        96 -~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~ir  167 (229)
                       .+++++.+.+   ..++||++||..+..+.+..            ....|+.||.    +++.++.+++++||++|+|.
T Consensus       223 ~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~------------~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa  290 (422)
T 3s8m_A          223 ELWIDALEGAGVLADGARSVAFSYIGTEITWPIY------------WHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH------------TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc------------cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence             6777765432   12489999998765332211            0135999998    66777788888999999999


Q ss_pred             cCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          168 PGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       168 pg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ||.+.+|.......... .......++++.+.+++++....||-.
T Consensus       291 PG~i~T~~~~~ip~~~~-~~~~~~~~m~r~G~pEdva~~v~~L~s  334 (422)
T 3s8m_A          291 LKSVVTQASAAIPVMPL-YISMVYKIMKEKGLHEGTIEQLDRLFR  334 (422)
T ss_dssp             ECCCCCTTGGGSTHHHH-HHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             cCCCcChhhhcCCCChH-HHHHHHhhhcCCcChHHHHHHHHHHhc
Confidence            99999997543222111 111222357888999999998888765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.88  E-value=8e-23  Score=169.13  Aligned_cols=197  Identities=12%  Similarity=0.061  Sum_probs=113.1

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCC-----------CCCCCC---------------CCCC----CeEEE
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDISGL---------------PSEG----ALELV   49 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~---------------~~~~----~~~~~   49 (229)
                      ++|||||  +++||++++++|+++|++|++++|++           ++++..               ....    ..+++
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (319)
T 2ptg_A           11 TAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIY   90 (319)
T ss_dssp             EEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEE
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccc
Confidence            5899999  89999999999999999999998642           111110               0000    02444


Q ss_pred             EccC------------CC--------hhhHHhhc-------CCccEEEEeCcccC--------CCCCCchhhhHhhHHHH
Q 027007           50 YGDV------------TD--------YRSLVDAC-------FGCHVIFHTAALVE--------PWLPDPSRFFAVNVEGL   94 (229)
Q Consensus        50 ~~D~------------~~--------~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~~n~~~~   94 (229)
                      .+|+            +|        .+++.+++       .++|+||||||...        .+.++|++.+++|+.++
T Consensus        91 ~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~  170 (319)
T 2ptg_A           91 PLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSF  170 (319)
T ss_dssp             ECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             cccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHH
Confidence            4442            22        23444443       36899999998531        12235778899999999


Q ss_pred             HHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEec
Q 027007           95 KNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYP  168 (229)
Q Consensus        95 ~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irp  168 (229)
                      +++++++.+.+. .++||++||..++.+.+..             ...|+.||+    +++.++.++++ +||++++|+|
T Consensus       171 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          171 VSLLQHFLPLMKEGGSALALSYIASEKVIPGY-------------GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEEECC-------------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHhcCceEEEEeccccccccCcc-------------chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999999998753 2599999998776443221             024999998    66666777775 7999999999


Q ss_pred             CceecCCCCchhH-----HHHHHh--hcccceeeeehhhHhhhhhhHHHH
Q 027007          169 GVIYGPGKLTTGN-----LVAKLQ--WKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       169 g~i~g~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |.+.++.......     +.....  .....+.++++.|++++.++.||-
T Consensus       238 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~  287 (319)
T 2ptg_A          238 GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLL  287 (319)
T ss_dssp             CCCC-------------------------------CCCHHHHHHHHHHHT
T ss_pred             CCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Confidence            9999986422110     001100  011234567788999988877764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.88  E-value=9.7e-23  Score=170.91  Aligned_cols=198  Identities=12%  Similarity=-0.090  Sum_probs=140.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCCCCCCCC----------------C-CCCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----------------P-SEGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~----------------~-~~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++|||||+++||+++++.|++ +|++|++++|+.+.....                . ....+..+.+|++|.+++.+++
T Consensus        49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  128 (405)
T 3zu3_A           49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTI  128 (405)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            589999999999999999999 999999999876543311                0 1135778999999999886665


Q ss_pred             C-------CccEEEEeCccc---------------C-------------------------CCCCCchhhhHhhHHHHH-
Q 027007           64 F-------GCHVIFHTAALV---------------E-------------------------PWLPDPSRFFAVNVEGLK-   95 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~---------------~-------------------------~~~~~~~~~~~~n~~~~~-   95 (229)
                      +       ++|+||||||..               .                         .+.++|++.+++|..+++ 
T Consensus       129 ~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~  208 (405)
T 3zu3_A          129 DAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQ  208 (405)
T ss_dssp             HHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHH
Confidence            3       589999999862               0                         122357788999988887 


Q ss_pred             HHHHHHHhc-CC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhc-CCCeEEEe
Q 027007           96 NVVQAAKET-KT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASE-GLPIVPVY  167 (229)
Q Consensus        96 ~l~~~~~~~-~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~-gi~~~~ir  167 (229)
                      .+++++.+. +.  .++||++||..+....+..            ....|+.||.    +++.++.+++++ |+++|++.
T Consensus       209 ~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~------------~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVa  276 (405)
T 3zu3_A          209 MWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY------------WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSV  276 (405)
T ss_dssp             HHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT------------TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             HHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc------------cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEE
Confidence            677766542 21  2489999998765433221            0145999998    667777888899 99999999


Q ss_pred             cCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          168 PGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       168 pg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      ||.+-+|.......... ........+++.+.++++.....||-.
T Consensus       277 PG~i~T~~s~~ip~~p~-y~~~l~~~mkr~G~~Ed~a~~i~~L~s  320 (405)
T 3zu3_A          277 LKAVVSQASSAIPMMPL-YLSLLFKVMKEKGTHEGCIEQVYSLYK  320 (405)
T ss_dssp             CCCCCCHHHHTSTTHHH-HHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             eCCCcCchhhcCCCCcH-HHHHHHHHHhcCCCcHHHHHHHHHHHh
Confidence            99999985322111111 111112246788888898888777754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.88  E-value=1.2e-22  Score=167.89  Aligned_cols=197  Identities=13%  Similarity=0.075  Sum_probs=130.4

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCC-----------CCCC---CCCCCC---CeEEEEcc----------
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDIS---GLPSEG---ALELVYGD----------   52 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~-----------~~~~---~~~~~~---~~~~~~~D----------   52 (229)
                      ++|||||  +++||++++++|+++|++|++++|++           ++.+   .+....   .+.++.+|          
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   90 (315)
T 2o2s_A           11 TAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVP   90 (315)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSC
T ss_pred             EEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhh
Confidence            5899999  89999999999999999999998642           1111   111100   12344443          


Q ss_pred             --CCC--------hhhHHhhc-------CCccEEEEeCcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-
Q 027007           53 --VTD--------YRSLVDAC-------FGCHVIFHTAALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (229)
Q Consensus        53 --~~~--------~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (229)
                        ++|        .+++.+++       .++|+||||||...        .+.++|++.+++|+.+++++++++.+.+. 
T Consensus        91 ~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  170 (315)
T 2o2s_A           91 QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE  170 (315)
T ss_dssp             HHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE
T ss_pred             hhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence              332        34554443       36899999998532        12245778899999999999999988753 


Q ss_pred             CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecCCCCch--
Q 027007          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--  179 (229)
Q Consensus       107 ~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~~--  179 (229)
                      .++||++||..++.+.+..             ...|+.||.    +++.++.++++ +||++++|+||.+.++.....  
T Consensus       171 ~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~  237 (315)
T 2o2s_A          171 GGSAVTLSYLAAERVVPGY-------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK  237 (315)
T ss_dssp             EEEEEEEEEGGGTSCCTTC-------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC
T ss_pred             CCEEEEEecccccccCCCc-------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc
Confidence            2599999998765433221             124999999    55556666764 799999999999988742100  


Q ss_pred             ---hHHHHHHh--hcccceeeeehhhHhhhhhhHHHH
Q 027007          180 ---GNLVAKLQ--WKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       180 ---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                         ..+.....  .....+.++.+.|++++.++.||-
T Consensus       238 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  274 (315)
T 2o2s_A          238 SGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLL  274 (315)
T ss_dssp             SSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh
Confidence               00111110  111224567788999998887764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.88  E-value=2.1e-22  Score=175.26  Aligned_cols=160  Identities=28%  Similarity=0.355  Sum_probs=126.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCC-------CC-CCCCeEEEEccCCChhhHHhhcCC------
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACFG------   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~-------~~-~~~~~~~~~~D~~~~~~~~~~~~~------   65 (229)
                      +++|||||+|+||++++++|+++|++ |++++|+....+.       +. ....++++.+|++|.+++.++++.      
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~  306 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP  306 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCC
Confidence            37999999999999999999999985 9999997642211       11 113678999999999999888765      


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|+|||+||....      +.+++++.+++|+.++.++.+++.+. ..++||++||..++.+..+              .
T Consensus       307 ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g--------------~  371 (486)
T 2fr1_A          307 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG--------------L  371 (486)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT--------------C
T ss_pred             CcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCC--------------C
Confidence            5999999997532      22356678999999999999999876 3679999999866543322              2


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.+|.+.+.+++++..+|+++++|+||.+++++
T Consensus       372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~g  407 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG  407 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCc
Confidence            449999999999999888889999999999998874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.87  E-value=5.3e-22  Score=166.39  Aligned_cols=147  Identities=27%  Similarity=0.302  Sum_probs=116.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC--CCCCCCCCeEEEEcc-CCChhhHHhhcCCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGD-VTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      |+|+|||||||||++++++|+++|++|++++|++++.  +.+....+++++.+| ++|++++.++++++|+|||+++...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~   85 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA   85 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCC
Confidence            5799999999999999999999999999999987643  112112368899999 9999999999999999999986421


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcccee--eecCCCcccCCCCccccccccCcHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA--LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~--~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (229)
                               .+.|..+ .++++++.+.+..++|||+||...  |+.           .    ....|+.+|..+|.+++.
T Consensus        86 ---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~----~~~~y~~sK~~~E~~~~~  140 (352)
T 1xgk_A           86 ---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------W----PAVPMWAPKFTVENYVRQ  140 (352)
T ss_dssp             ---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------C----CCCTTTHHHHHHHHHHHT
T ss_pred             ---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------C----CCccHHHHHHHHHHHHHH
Confidence                     1346666 999999988742679999999752  211           0    124599999999999876


Q ss_pred             HHhcCCCeEEEecCceecCCC
Q 027007          156 AASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       156 ~~~~gi~~~~irpg~i~g~~~  176 (229)
                         .|++++++||+ +||+..
T Consensus       141 ---~gi~~~ivrpg-~~g~~~  157 (352)
T 1xgk_A          141 ---LGLPSTFVYAG-IYNNNF  157 (352)
T ss_dssp             ---SSSCEEEEEEC-EEGGGC
T ss_pred             ---cCCCEEEEecc-eecCCc
Confidence               48999999998 578754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.87  E-value=9e-22  Score=171.15  Aligned_cols=160  Identities=23%  Similarity=0.301  Sum_probs=129.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC---C----C-CCCCeEEEEccCCChhhHHhhcC------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG---L----P-SEGALELVYGDVTDYRSLVDACF------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~---~----~-~~~~~~~~~~D~~~~~~~~~~~~------~~   66 (229)
                      ++|||||+|+||+++++.|+++|+ +|++++|+....+.   +    . ....+.++.+|++|.+++.++++      .+
T Consensus       241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~l  320 (496)
T 3mje_A          241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPL  320 (496)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCE
T ss_pred             EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999998 78888886432221   1    1 12368899999999999988775      47


Q ss_pred             cEEEEeCccc-CC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           67 HVIFHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        67 d~vi~~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |+||||||.. ..      +.+++++.+++|+.++.++.+++.+.+ .++||++||..++.+..+.              
T Consensus       321 d~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g~--------------  385 (496)
T 3mje_A          321 TAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGGQ--------------  385 (496)
T ss_dssp             EEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTTC--------------
T ss_pred             eEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCCc--------------
Confidence            9999999975 22      223467789999999999999998874 6799999998766544332              


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..|+.+|.+.+.+++++..+|+++++|+||.+.+++.
T Consensus       386 ~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCcc
Confidence            4499999999999999988999999999999987653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.87  E-value=4.5e-22  Score=166.18  Aligned_cols=149  Identities=17%  Similarity=0.228  Sum_probs=116.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCC-----CCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~-----~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      |+||||||||+||++++++|+++|++|++++|+..... ...     ...+++++++|++|.+++.++++  ++|+|||+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            57999999999999999999999999999999863211 000     01378999999999999999999  99999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ++.             .|+.++.++++++.+.+..++||+ |+   |+..    .++..+.+   +...|+.+|..+|.+
T Consensus        91 a~~-------------~n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~e~~~~~---p~~~y~~sK~~~e~~  146 (346)
T 3i6i_A           91 VGG-------------ESILDQIALVKAMKAVGTIKRFLP-SE---FGHD----VNRADPVE---PGLNMYREKRRVRQL  146 (346)
T ss_dssp             CCG-------------GGGGGHHHHHHHHHHHCCCSEEEC-SC---CSSC----TTTCCCCT---THHHHHHHHHHHHHH
T ss_pred             Cch-------------hhHHHHHHHHHHHHHcCCceEEee-cc---cCCC----CCccCcCC---CcchHHHHHHHHHHH
Confidence            985             278889999999998864778886 32   3321    22222211   135699999999988


Q ss_pred             HHHHHhcCCCeEEEecCceecCCC
Q 027007          153 ALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      +++   .|++++++|||+++|...
T Consensus       147 l~~---~g~~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          147 VEE---SGIPFTYICCNSIASWPY  167 (346)
T ss_dssp             HHH---TTCCBEEEECCEESSCCC
T ss_pred             HHH---cCCCEEEEEecccccccC
Confidence            876   689999999999999753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.86  E-value=1e-21  Score=171.69  Aligned_cols=157  Identities=22%  Similarity=0.289  Sum_probs=125.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC-------CC-CCCCeEEEEccCCChhhHHhhcCC--ccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACFG--CHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-------~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi   70 (229)
                      ++|||||+|+||++++++|+++|+ +|++++|+....+.       +. ....++++.+|++|.+++.++++.  +|+||
T Consensus       261 ~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VV  340 (511)
T 2z5l_A          261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVF  340 (511)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEE
Confidence            699999999999999999999998 59999997532211       11 123588899999999999998864  99999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||||....      +.++++..+++|+.++.++.+++.+....++||++||..++.+..+              ...|+.
T Consensus       341 h~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g--------------~~~Yaa  406 (511)
T 2z5l_A          341 HTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG--------------QGAYAA  406 (511)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT--------------BHHHHH
T ss_pred             ECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC--------------CHHHHH
Confidence            99997532      2234667899999999999998876524579999999865433322              245999


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEecCcee
Q 027007          145 SKAVADKIALQAASEGLPIVPVYPGVIY  172 (229)
Q Consensus       145 sK~~~e~~~~~~~~~gi~~~~irpg~i~  172 (229)
                      +|.+.+.+++.+..+|+++++|+||.+.
T Consensus       407 aKa~ld~la~~~~~~gi~v~sv~pG~~~  434 (511)
T 2z5l_A          407 ANAALDALAERRRAAGLPATSVAWGLWG  434 (511)
T ss_dssp             HHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence            9999999999888889999999999883

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.86  E-value=8.6e-22  Score=162.96  Aligned_cols=157  Identities=17%  Similarity=0.113  Sum_probs=114.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC---------CCCC----CCCCCCeEEEEccCCChhhHHhhc-----
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISG----LPSEGALELVYGDVTDYRSLVDAC-----   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~---------~~~~----~~~~~~~~~~~~D~~~~~~~~~~~-----   63 (229)
                      ++|||||+|+||++++++|+++|++|++.++...         +.+.    +... . ....+|+++.+++.+++     
T Consensus        11 ~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~-~~~~~D~~~~~~~~~~~~~~~~   88 (319)
T 1gz6_A           11 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-G-GKAVANYDSVEAGEKLVKTALD   88 (319)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-T-CEEEEECCCGGGHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-C-CeEEEeCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999876421         1110    0000 1 12357999988765553     


Q ss_pred             --CCccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCc
Q 027007           64 --FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        64 --~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                        .++|+||||||....      +.++++..+++|+.+++++++++.+.+   ..++||++||..+..+..+        
T Consensus        89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~--------  160 (319)
T 1gz6_A           89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG--------  160 (319)
T ss_dssp             HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC--------
Confidence              368999999997432      223577889999999999999987653   2469999999765433221        


Q ss_pred             cccccccCcHHHHHHHHHHHHH----HHHhcCCCeEEEecCceecCC
Q 027007          133 HEEKYFCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~----~~~~~gi~~~~irpg~i~g~~  175 (229)
                            ...|+.||...+.+.+    ++.++|+++++|+||.+ ++.
T Consensus       161 ------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~  200 (319)
T 1gz6_A          161 ------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM  200 (319)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc
Confidence                  2459999996555554    45566999999999997 554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.84  E-value=2e-21  Score=170.50  Aligned_cols=160  Identities=19%  Similarity=0.197  Sum_probs=125.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEE-EcCCCC----------CCCCC--------CCCCeEEEEccCCChhhHHh
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRAL-VRRTSD----------ISGLP--------SEGALELVYGDVTDYRSLVD   61 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~-~r~~~~----------~~~~~--------~~~~~~~~~~D~~~~~~~~~   61 (229)
                      ++|||||+|+||.++++.|+++|++ |+++ +|+...          .+.+.        ....+.++.+|++|.+++.+
T Consensus       253 ~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~  332 (525)
T 3qp9_A          253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAAR  332 (525)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHH
Confidence            6899999999999999999999987 6666 776422          11110        01368899999999999988


Q ss_pred             hcCC------ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC----CceEEEEccceeeecCCCc
Q 027007           62 ACFG------CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        62 ~~~~------~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~iv~~sS~~~~~~~~~~  125 (229)
                      +++.      +|+||||||....      +.+++++.+++|+.|+.++.+++.+.+.    .++||++||..++.+..+.
T Consensus       333 ~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~  412 (525)
T 3qp9_A          333 LLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQ  412 (525)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTC
T ss_pred             HHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCC
Confidence            8753      7999999997432      2235677899999999999999988752    4689999998776544332


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                                    ..|+.+|.+.+.+++++..+|+++++|+||.+-+++
T Consensus       413 --------------~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm  448 (525)
T 3qp9_A          413 --------------GAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSR  448 (525)
T ss_dssp             --------------HHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSG
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccc
Confidence                          449999999999998887789999999999995554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.84  E-value=5.6e-22  Score=177.13  Aligned_cols=156  Identities=19%  Similarity=0.132  Sum_probs=110.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC---------CCCCCCCCCC--CCeEEEEccCCChhhHHhhcC------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR---------TSDISGLPSE--GALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~---------~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      ++|||||+|+||++++++|+++|++|++++|.         .++.+.+...  .......+|++|.+++.++++      
T Consensus        21 ~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~  100 (613)
T 3oml_A           21 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAF  100 (613)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC------
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHC
Confidence            58999999999999999999999999999883         2211111000  001123479999988877665      


Q ss_pred             -CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                       ++|+||||||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+..+          
T Consensus       101 g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~----------  170 (613)
T 3oml_A          101 GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------  170 (613)
T ss_dssp             ----CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT----------
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC----------
Confidence             48999999997422      234678899999999999999997654   2359999999876654332          


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCce
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVI  171 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i  171 (229)
                          ...|+.||+    +++.++.+++++||++++|+||.+
T Consensus       171 ----~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          171 ----QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             ----ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence                245999998    455556666678999999999975

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.83  E-value=3.8e-21  Score=171.31  Aligned_cols=185  Identities=18%  Similarity=0.192  Sum_probs=129.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-C-CCCC-CCCCeEEEEccC-CChhhH----HhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-I-SGLP-SEGALELVYGDV-TDYRSL----VDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~-~~~~-~~~~~~~~~~D~-~~~~~~----~~~~~~~d~vi~~a   73 (229)
                      .++||||+++||++++++|+++|++|++.+|+... . +++. ....+..+.+|+ ++.+.+    .+.+.++|+|||||
T Consensus       324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNA  403 (604)
T 2et6_A          324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNA  403 (604)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             eEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            48999999999999999999999999998863211 0 0111 112456677888 554443    22245799999999


Q ss_pred             cccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |...      .+.++|++.+++|+.+++++++++.+++   ..++||++||..+..+.++              ...|+.
T Consensus       404 Gi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~--------------~~~Y~a  469 (604)
T 2et6_A          404 GILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG--------------QANYSS  469 (604)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT--------------BHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC--------------ChhHHH
Confidence            9742      1334688899999999999999998764   2359999999876543322              235999


Q ss_pred             HHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ||.    +++.++.+++++||++|+|.||. .+++....   ...       ...+...|++++..+.||-
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~---~~~-------~~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI---MRE-------QDKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CCSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc---Cch-------hhccCCCHHHHHHHHHHHh
Confidence            998    67777888888899999999995 66643110   000       0123457888887776653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.83  E-value=2.3e-20  Score=158.74  Aligned_cols=197  Identities=10%  Similarity=-0.084  Sum_probs=133.8

Q ss_pred             EEEEEcCCChHHHH--HHHHHHHCCCeEEEEEcCCCCCCCC-----------------CCCCCeEEEEccCCChhhHHhh
Q 027007            2 KILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDISGL-----------------PSEGALELVYGDVTDYRSLVDA   62 (229)
Q Consensus         2 ~vlItGg~G~iG~~--l~~~l~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~~~~D~~~~~~~~~~   62 (229)
                      ++|||||+++||++  ++++|+++|++|++++|+.......                 .....+..+++|++|.+++.++
T Consensus        62 ~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~  141 (418)
T 4eue_A           62 KVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKV  141 (418)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHH
Confidence            58999999999999  9999999999999999976543211                 0113578899999999988766


Q ss_pred             cC-------CccEEEEeCccc---------------C-------------------------CCCCCchhhhHhhHHHHH
Q 027007           63 CF-------GCHVIFHTAALV---------------E-------------------------PWLPDPSRFFAVNVEGLK   95 (229)
Q Consensus        63 ~~-------~~d~vi~~a~~~---------------~-------------------------~~~~~~~~~~~~n~~~~~   95 (229)
                      ++       ++|+||||||..               .                         .+.++|+..+++|..+.+
T Consensus       142 v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~  221 (418)
T 4eue_A          142 IKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDW  221 (418)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHH
Confidence            53       589999999863               0                         122345566777777666


Q ss_pred             -HHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEE
Q 027007           96 -NVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPV  166 (229)
Q Consensus        96 -~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~i  166 (229)
                       .+++++...+.   .+++|++||..+..+.+..            ....|+.||+    +++.++.++++ +|++++++
T Consensus       222 ~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V  289 (418)
T 4eue_A          222 QEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS  289 (418)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             HHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence             66666654321   2489999998654433221            0145999998    66777788888 89999999


Q ss_pred             ecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          167 YPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       167 rpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||.+.++........ +.........+++.+.++++.....||-
T Consensus       290 ~PG~v~T~~s~~ip~~-p~y~~~~~~~mk~~G~~E~v~e~~~~L~  333 (418)
T 4eue_A          290 VNKALVTKASAYIPTF-PLYAAILYKVMKEKNIHENCIMQIERMF  333 (418)
T ss_dssp             ECCCCCCHHHHTSTTH-HHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             ECCcCcChhhhcCCCC-cHHHHHHHHHHhhcCChHHHHHHHHHHh
Confidence            9999999753211111 1111111123456677777776666553

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.83  E-value=3.8e-20  Score=152.08  Aligned_cols=152  Identities=20%  Similarity=0.266  Sum_probs=113.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCC--CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|+||||||+||++++++|+++|++|++++|+.....     .+.  ...+++++++|++|++++.++++++|+|||++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   84 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   84 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence            57999999999999999999999999999999854210     000  11368899999999999999999999999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      +....         +.|+.++.++++++.+.+..++||+ | .  |+......  +....   +..+.| .+|..+|.++
T Consensus        85 ~~~~~---------~~~~~~~~~l~~aa~~~g~v~~~v~-S-~--~g~~~~~~--~~~~~---p~~~~y-~sK~~~e~~~  145 (313)
T 1qyd_A           85 AGGVL---------SHHILEQLKLVEAIKEAGNIKRFLP-S-E--FGMDPDIM--EHALQ---PGSITF-IDKRKVRRAI  145 (313)
T ss_dssp             CCSSS---------STTTTTHHHHHHHHHHSCCCSEEEC-S-C--CSSCTTSC--CCCCS---STTHHH-HHHHHHHHHH
T ss_pred             ccccc---------hhhHHHHHHHHHHHHhcCCCceEEe-c-C--CcCCcccc--ccCCC---CCcchH-HHHHHHHHHH
Confidence            86432         1367788999999998753679985 3 2  33221111  01100   112358 9999999887


Q ss_pred             HHHHhcCCCeEEEecCceecC
Q 027007          154 LQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       154 ~~~~~~gi~~~~irpg~i~g~  174 (229)
                      ++   .|++++++||+.++++
T Consensus       146 ~~---~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A          146 EA---ASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             HH---TTCCBCEEECCEEHHH
T ss_pred             Hh---cCCCeEEEEeceeccc
Confidence            64   5899999999999874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.81  E-value=5e-20  Score=150.97  Aligned_cols=148  Identities=26%  Similarity=0.327  Sum_probs=109.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-------CCCCCC--CCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-------~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      |+|+||||||+||++++++|+++|++|++++|+..       +.+.+.  ...+++++++|++|++++.++++++|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   82 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVIC   82 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEEE
Confidence            57999999999999999999999999999999861       110000  013688999999999999999999999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +++...             +.++.++++++.+.+..++||+  |.  |+...    ++..+..+  ..+.| .+|..+|.
T Consensus        83 ~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~--S~--~g~~~----~~~~~~~p--~~~~y-~sK~~~e~  138 (307)
T 2gas_A           83 AAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP--SE--FGLDV----DRHDAVEP--VRQVF-EEKASIRR  138 (307)
T ss_dssp             CSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC--SC--CSSCT----TSCCCCTT--HHHHH-HHHHHHHH
T ss_pred             CCcccc-------------cccHHHHHHHHHhcCCceEEee--cc--cccCc----ccccCCCc--chhHH-HHHHHHHH
Confidence            998532             3457889999988753678883  32  33211    11111111  12458 99999888


Q ss_pred             HHHHHHhcCCCeEEEecCceecCC
Q 027007          152 IALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       152 ~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      +++.   .|++++++|||.++++.
T Consensus       139 ~~~~---~~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          139 VIEA---EGVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             HHHH---HTCCBEEEECCEETTTT
T ss_pred             HHHH---cCCCeEEEEcceeeccc
Confidence            7764   58999999999999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.81  E-value=3.5e-20  Score=169.66  Aligned_cols=157  Identities=22%  Similarity=0.339  Sum_probs=128.8

Q ss_pred             EEEEEcCCChHHHHHHHHHH-HCCC-eEEEEEcCCCCCCCC-------C-CCCCeEEEEccCCChhhHHhhcC------C
Q 027007            2 KILVSGASGYLGGRLCHALL-KQGH-SVRALVRRTSDISGL-------P-SEGALELVYGDVTDYRSLVDACF------G   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~-~~g~-~V~~~~r~~~~~~~~-------~-~~~~~~~~~~D~~~~~~~~~~~~------~   65 (229)
                      ++|||||+|+||+++++.|+ ++|+ +|++++|+....+..       . ....+.++++|++|.+++.++++      .
T Consensus       532 ~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~  611 (795)
T 3slk_A          532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHP  611 (795)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             ceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Confidence            58999999999999999999 7998 599999984322211       1 12368889999999999988765      3


Q ss_pred             ccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|+||||||....      +.++|++.+++|+.|++++.+++.+.+   +||++||.+++.+.++.              
T Consensus       612 id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l---~iV~~SS~ag~~g~~g~--------------  674 (795)
T 3slk_A          612 LTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV---ALVLFSSVSGVLGSGGQ--------------  674 (795)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS---EEEEEEETHHHHTCSSC--------------
T ss_pred             CEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC---EEEEEccHHhcCCCCCC--------------
Confidence            7999999997432      335688899999999999999986655   99999998877654432              


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      ..|+.+|.+.+.+++++..+|++++.|.||.+.+++
T Consensus       675 ~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          675 GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence            449999999999999999999999999999998775

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=1.9e-20  Score=166.87  Aligned_cols=152  Identities=20%  Similarity=0.153  Sum_probs=111.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC---------CCCCC----CCCCCCeEEEEccCCChhhHHhh------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISG----LPSEGALELVYGDVTDYRSLVDA------   62 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~----~~~~~~~~~~~~D~~~~~~~~~~------   62 (229)
                      .++||||+++||++++++|+++|++|++.+|+.         ++.+.    +... +.. ..+|++|.+++.++      
T Consensus        10 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~-~~~d~~d~~~~~~~v~~~~~   87 (604)
T 2et6_A           10 VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGV-AVADYNNVLDGDKIVETAVK   87 (604)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCE-EEEECCCTTCHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCe-EEEEcCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999998764         11111    1001 111 23466666444333      


Q ss_pred             -cCCccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCc
Q 027007           63 -CFGCHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQV  132 (229)
Q Consensus        63 -~~~~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~  132 (229)
                       +.++|+||||||...      .+.++|++.+++|+.|++++++++.+++.   .++||++||..+..+.++        
T Consensus        88 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~--------  159 (604)
T 2et6_A           88 NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG--------  159 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC--------
Confidence             346999999999732      13346888999999999999999987652   359999999876544332        


Q ss_pred             cccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecC
Q 027007          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPG  169 (229)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg  169 (229)
                            ...|+.||.    +++.++.+++++||++|+|.|+
T Consensus       160 ------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          160 ------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                  234999998    7777788888889999999997

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.80  E-value=9.5e-21  Score=157.25  Aligned_cols=168  Identities=14%  Similarity=0.086  Sum_probs=121.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCC--CCC----CCCCCCCeEEEEccCCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTS--DIS----GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d   67 (229)
                      |||+||||+||||++++..|+.+|+       +|+++++.+.  +.+    ++.. ..+.++ .|+++.+++.++++++|
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-cccccc-CCeEeccChHHHhCCCC
Confidence            5899999999999999999999986       8999988631  100    1111 011223 57777777888889999


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCC-ccccccccCcHHHH
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQ-VHEEKYFCTQYERS  145 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~s  145 (229)
                      +|||+||.......+..++++.|+.++.++++++.++. ...+++++|+.....   .+...+.. ..+   +...|+.+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~---~~~~~~~~~~~~---p~~~yg~t  156 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN---ALIAYKNAPGLN---PRNFTAMT  156 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH---HHHHHHTCTTSC---GGGEEECC
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh---HHHHHHHcCCCC---hhheeccc
Confidence            99999997643345667899999999999999999874 334788777643100   01111111 111   12459999


Q ss_pred             HHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       146 K~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      |..+|++...+++ .|++++.+||+++|||.+
T Consensus       157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             hHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            9999999888875 499999999999999964

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.80  E-value=4.4e-19  Score=145.40  Aligned_cols=147  Identities=29%  Similarity=0.422  Sum_probs=109.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC--C-C---CC--CCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--S-G---LP--SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~-~---~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |+|+||||||+||++++++|+++|++|++++|+....  . .   +.  ...+++++++|++|++++.++++++|+|||+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~   84 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   84 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEEC
Confidence            4799999999999999999999999999999986432  0 0   00  1236889999999999999999999999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ++...             +.++.++++++.+.+..++||+ |+   |+...    ++..+..+  ....| .+|..+|.+
T Consensus        85 a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p--~~~~y-~sK~~~e~~  140 (308)
T 1qyc_A           85 VGSLQ-------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNVHAVEP--AKSVF-EVKAKVRRA  140 (308)
T ss_dssp             CCGGG-------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSCCCCTT--HHHHH-HHHHHHHHH
T ss_pred             Ccchh-------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc----cccccCCc--chhHH-HHHHHHHHH
Confidence            98531             3456889999988754678884 33   33211    11111111  12358 899998888


Q ss_pred             HHHHHhcCCCeEEEecCceecC
Q 027007          153 ALQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       153 ~~~~~~~gi~~~~irpg~i~g~  174 (229)
                      +++   .+++++++||+.++++
T Consensus       141 ~~~---~~~~~~~~r~~~~~~~  159 (308)
T 1qyc_A          141 IEA---EGIPYTYVSSNCFAGY  159 (308)
T ss_dssp             HHH---HTCCBEEEECCEEHHH
T ss_pred             HHh---cCCCeEEEEeceeccc
Confidence            764   4899999999999875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.79  E-value=4.4e-19  Score=146.39  Aligned_cols=147  Identities=16%  Similarity=0.234  Sum_probs=109.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCC-----CCCC--CCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDI-----SGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~-----~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |+|+||||||+||++++++|+++|++|++++|+. ...     +.+.  ...+++++++|++|++++.++++++|+|||+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~   84 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISA   84 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            5799999999999999999999999999999986 211     0000  0136889999999999999999999999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ++...             +.++.++++++.+.+..++||+  |.  |+...    ++..+..  +..+.| .+|..+|.+
T Consensus        85 a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~--S~--~g~~~----~~~~~~~--p~~~~y-~sK~~~e~~  140 (321)
T 3c1o_A           85 LPFPM-------------ISSQIHIINAIKAAGNIKRFLP--SD--FGCEE----DRIKPLP--PFESVL-EKKRIIRRA  140 (321)
T ss_dssp             CCGGG-------------SGGGHHHHHHHHHHCCCCEEEC--SC--CSSCG----GGCCCCH--HHHHHH-HHHHHHHHH
T ss_pred             CCccc-------------hhhHHHHHHHHHHhCCccEEec--cc--cccCc----cccccCC--CcchHH-HHHHHHHHH
Confidence            98532             4457899999988753678883  32  33211    1111111  112458 999999988


Q ss_pred             HHHHHhcCCCeEEEecCceecC
Q 027007          153 ALQAASEGLPIVPVYPGVIYGP  174 (229)
Q Consensus       153 ~~~~~~~gi~~~~irpg~i~g~  174 (229)
                      +++   .+++++++||+.++++
T Consensus       141 ~~~---~~~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          141 IEA---AALPYTYVSANCFGAY  159 (321)
T ss_dssp             HHH---HTCCBEEEECCEEHHH
T ss_pred             HHH---cCCCeEEEEeceeccc
Confidence            764   4899999999998875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.79  E-value=2.6e-19  Score=147.60  Aligned_cols=146  Identities=20%  Similarity=0.301  Sum_probs=108.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCCC--CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      +|+||||||+||++++++|+++|++|++++|+.+ +.+.+.  ...+++++++|++|++++.++++++|+|||+++... 
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~-   91 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ-   91 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG-
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh-
Confidence            7999999999999999999999999999999864 211110  113688999999999999999999999999998531 


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                                  +.++.++++++.+.+..++||+ |+   |+...    ++..+..  +....| .+|..+|.++++   
T Consensus        92 ------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~--p~~~~y-~sK~~~e~~~~~---  145 (318)
T 2r6j_A           92 ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE----DRINALP--PFEALI-ERKRMIRRAIEE---  145 (318)
T ss_dssp             ------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT----TTCCCCH--HHHHHH-HHHHHHHHHHHH---
T ss_pred             ------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc----ccccCCC--CcchhH-HHHHHHHHHHHh---
Confidence                        3457899999988753678884 32   33211    1111111  112358 899998888764   


Q ss_pred             cCCCeEEEecCceecC
Q 027007          159 EGLPIVPVYPGVIYGP  174 (229)
Q Consensus       159 ~gi~~~~irpg~i~g~  174 (229)
                      .+++++++||+.+++.
T Consensus       146 ~~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          146 ANIPYTYVSANCFASY  161 (318)
T ss_dssp             TTCCBEEEECCEEHHH
T ss_pred             cCCCeEEEEcceehhh
Confidence            5899999999988764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.76  E-value=6.7e-19  Score=169.65  Aligned_cols=189  Identities=17%  Similarity=0.128  Sum_probs=128.9

Q ss_pred             EEEEEcCCCh-HHHHHHHHHHHCCCeEEEEE-cCCCCCCC----C----C-CCCCeEEEEccCCChhhHHhhcC------
Q 027007            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDISG----L----P-SEGALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         2 ~vlItGg~G~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~----~----~-~~~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      ++|||||+++ ||+++++.|+++|++|++++ |+.++.+.    +    . ....+.++.+|++|.+++.++++      
T Consensus       677 vaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~  756 (1887)
T 2uv8_A          677 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  756 (1887)
T ss_dssp             EEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCT
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5899999998 99999999999999999985 54432211    1    1 12357889999999998876542      


Q ss_pred             -------CccEEEEeCcccCCC---------CCCchhhhHhhHHHHHHHHHHH--HhcCC---CceEEEEccceeeecCC
Q 027007           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAA--KETKT---VEKIIYTSSFFALGSTD  123 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~--~~~~~---~~~iv~~sS~~~~~~~~  123 (229)
                             ++|+||||||+....         .+++++.+++|+.+++++++++  .+.+.   .++||++||..++.+  
T Consensus       757 ~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--  834 (1887)
T 2uv8_A          757 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  834 (1887)
T ss_dssp             TTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--
Confidence                   589999999974321         2346788999999999999988  34432   258999999866533  


Q ss_pred             CcccCCCCccccccccCcHHHHHHHHHHH-HHHH----HhcCCCeEEEecCcee-cCCCCchhHHHHHHhhcccceeeee
Q 027007          124 GYIADENQVHEEKYFCTQYERSKAVADKI-ALQA----ASEGLPIVPVYPGVIY-GPGKLTTGNLVAKLQWKKVDLVKDI  197 (229)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~----~~~gi~~~~irpg~i~-g~~~~~~~~~~~~~~~~~~~~~~~~  197 (229)
                      +              ...|+.||+..+.+ .+.+    .++ |++++|+||++. ++...... ....... ... + +.
T Consensus       835 g--------------~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-~~~~~~~-~~p-l-r~  895 (1887)
T 2uv8_A          835 G--------------DGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-IIAEGIE-KMG-V-RT  895 (1887)
T ss_dssp             C--------------BTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-TTHHHHH-TTS-C-CC
T ss_pred             C--------------CchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-hHHHHHH-hcC-C-CC
Confidence            1              13499999977766 3333    334 999999999999 45421111 1111111 111 1 44


Q ss_pred             hhhHhhhhhhHHHH
Q 027007          198 FLLERMRHSCKFLT  211 (229)
Q Consensus       198 ~~~~~~~~~~~~l~  211 (229)
                      +.+++++.++.||-
T Consensus       896 ~sPEEVA~avlfLa  909 (1887)
T 2uv8_A          896 FSQKEMAFNLLGLL  909 (1887)
T ss_dssp             EEHHHHHHHHHGGG
T ss_pred             CCHHHHHHHHHHHh
Confidence            57888887766653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.76  E-value=9.9e-20  Score=170.90  Aligned_cols=189  Identities=19%  Similarity=0.148  Sum_probs=129.8

Q ss_pred             EEEEEcCCCh-HHHHHHHHHHHCCCeEEEEE-cCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcC------
Q 027007            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         2 ~vlItGg~G~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      ++|||||+++ ||++++++|+++|++|++++ |+.++.+.    +..     ...+.++.+|++|.+++.++++      
T Consensus       478 vALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             EEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            5899999998 99999999999999999984 55544332    111     2357889999999998877642      


Q ss_pred             -------CccEEEEeCcccCCC---------CCCchhhhHhhHHHHHHHHHHH--HhcCCC---ceEEEEccceeeecCC
Q 027007           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAA--KETKTV---EKIIYTSSFFALGSTD  123 (229)
Q Consensus        65 -------~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~--~~~~~~---~~iv~~sS~~~~~~~~  123 (229)
                             ++|+||||||.....         .+++++.+++|+.++.++++++  .+.+..   ++||++||..+..+  
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--  635 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  635 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--
Confidence                   589999999974321         2346788999999999999988  444322   48999999765432  


Q ss_pred             CcccCCCCccccccccCcHHHHHHHHHHHH-HH----HHhcCCCeEEEecCceec-CCCCchhHHHHHHhhcccceeeee
Q 027007          124 GYIADENQVHEEKYFCTQYERSKAVADKIA-LQ----AASEGLPIVPVYPGVIYG-PGKLTTGNLVAKLQWKKVDLVKDI  197 (229)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~-~~----~~~~gi~~~~irpg~i~g-~~~~~~~~~~~~~~~~~~~~~~~~  197 (229)
                      +              ...|+.||+..+.+. +.    ++++ |++++|+||++.| +.... ....... ..... . +.
T Consensus       636 g--------------~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~-~e~~~~~-l~~ip-l-R~  696 (1688)
T 2pff_A          636 G--------------DGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSA-NNIIAEG-IEKMG-V-RT  696 (1688)
T ss_dssp             C--------------BTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCT-TTTCSTT-TSSSS-C-CC
T ss_pred             C--------------chHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCC-chHHHHH-HHhCC-C-CC
Confidence            1              135999999888873 32    2333 9999999999994 54211 0000000 11111 1 34


Q ss_pred             hhhHhhhhhhHHHH
Q 027007          198 FLLERMRHSCKFLT  211 (229)
Q Consensus       198 ~~~~~~~~~~~~l~  211 (229)
                      ..|++++.+..|+.
T Consensus       697 ~sPEEVA~aIlFLa  710 (1688)
T 2pff_A          697 FSQKEMAFNLLGLL  710 (1688)
T ss_dssp             CCCCTTHHHHHHHT
T ss_pred             CCHHHHHHHHHHHh
Confidence            57777777766653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.75  E-value=2.7e-18  Score=165.25  Aligned_cols=189  Identities=17%  Similarity=0.092  Sum_probs=131.3

Q ss_pred             EEEEEcCCCh-HHHHHHHHHHHCCCeEEEEEc-CCCCCC--------CCC-CCCCeEEEEccCCChhhHHhhcC------
Q 027007            2 KILVSGASGY-LGGRLCHALLKQGHSVRALVR-RTSDIS--------GLP-SEGALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         2 ~vlItGg~G~-iG~~l~~~l~~~g~~V~~~~r-~~~~~~--------~~~-~~~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      ++|||||+|+ ||+++++.|+++|++|+++++ +.++..        .+. ....+.++.+|++|.+++.++++      
T Consensus       654 vaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~  733 (1878)
T 2uv9_A          654 HALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTK  733 (1878)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSS
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence            5899999999 999999999999999999964 333211        111 12357889999999999877652      


Q ss_pred             -----CccEEEEeCcccCCC---------CCCchhhhHhhHHHHHHHHHH--HHhcCC---CceEEEEccceeeecCCCc
Q 027007           65 -----GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQA--AKETKT---VEKIIYTSSFFALGSTDGY  125 (229)
Q Consensus        65 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~--~~~~~~---~~~iv~~sS~~~~~~~~~~  125 (229)
                           ++|+||||||+....         .++|++.+++|+.+++++++.  +.+.+.   .++||++||..++.+.   
T Consensus       734 ~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg---  810 (1878)
T 2uv9_A          734 NGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN---  810 (1878)
T ss_dssp             SSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC---
T ss_pred             cccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC---
Confidence                 589999999974321         134678899999999999877  334432   2589999998665331   


Q ss_pred             ccCCCCccccccccCcHHHHHHHHHHHHHHH-----HhcCCCeEEEecCcee-cCCCCchhHHHHHHhhcccceeeeehh
Q 027007          126 IADENQVHEEKYFCTQYERSKAVADKIALQA-----ASEGLPIVPVYPGVIY-GPGKLTTGNLVAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       126 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~-----~~~gi~~~~irpg~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (229)
                                   ...|+.+|+..+.+.+.+     +++ |++++|+||++. +++... .......+. ... + +...
T Consensus       811 -------------~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~-~~~~~~~~~-~~p-l-r~~s  872 (1878)
T 2uv9_A          811 -------------DGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA-NNLVAEGVE-KLG-V-RTFS  872 (1878)
T ss_dssp             -------------CSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH-HHHTHHHHH-TTT-C-CCBC
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc-chhhHHHHH-hcC-C-CCCC
Confidence                         134999999777765543     233 999999999998 775422 111111111 111 1 4457


Q ss_pred             hHhhhhhhHHHH
Q 027007          200 LERMRHSCKFLT  211 (229)
Q Consensus       200 ~~~~~~~~~~l~  211 (229)
                      +++++.+..|+.
T Consensus       873 PeEVA~avlfLa  884 (1878)
T 2uv9_A          873 QQEMAFNLLGLM  884 (1878)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            888888876663

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.62  E-value=1.4e-15  Score=152.80  Aligned_cols=191  Identities=16%  Similarity=0.160  Sum_probs=123.5

Q ss_pred             EEEEEcCCCh-HHHHHHHHHHHCCCeEEEEEcCCCC-----CCCC----C-CCCCeEEEEccCCChhhHHhhc-------
Q 027007            2 KILVSGASGY-LGGRLCHALLKQGHSVRALVRRTSD-----ISGL----P-SEGALELVYGDVTDYRSLVDAC-------   63 (229)
Q Consensus         2 ~vlItGg~G~-iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~----~-~~~~~~~~~~D~~~~~~~~~~~-------   63 (229)
                      ++|||||+++ ||+++++.|+++|++|++++|+.++     .+.+    . ....+..+.+|++|.+++.+++       
T Consensus      2138 vaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~ 2217 (3089)
T 3zen_D         2138 VAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQ 2217 (3089)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCC
T ss_pred             EEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhh
Confidence            5899999999 9999999999999999999998654     2211    1 1235678899999999886653       


Q ss_pred             ----CCccEEEEeCcc----c-------CCCCCCchhh----hHhhHHHHHHHHHHHHhcCC---Cc---eEE-EEccce
Q 027007           64 ----FGCHVIFHTAAL----V-------EPWLPDPSRF----FAVNVEGLKNVVQAAKETKT---VE---KII-YTSSFF  117 (229)
Q Consensus        64 ----~~~d~vi~~a~~----~-------~~~~~~~~~~----~~~n~~~~~~l~~~~~~~~~---~~---~iv-~~sS~~  117 (229)
                          .++|++|||||.    .       ....++|+..    +++|+.+++.+++++.+.+.   ..   .++ ..|+..
T Consensus      2218 ~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~ 2297 (3089)
T 3zen_D         2218 TESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNR 2297 (3089)
T ss_dssp             EEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSST
T ss_pred             hhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccc
Confidence                248999999996    1       1123445555    89999999999998876531   11   122 222211


Q ss_pred             eeecCCCcccCCCCccccccccCcHHHHHHHHH----HHHHH--HHhcCCCeEEEecCceecCCCCchhHHHHHHhhccc
Q 027007          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVAD----KIALQ--AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKV  191 (229)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e----~~~~~--~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~  191 (229)
                        +...+              ...|+.||+...    .++.+  ++ .++++|.+.||++.+................ .
T Consensus      2298 --g~~g~--------------~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~-~ 2359 (3089)
T 3zen_D         2298 --GMFGG--------------DGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQNDAIVSAVEE-A 2359 (3089)
T ss_dssp             --TSCSS--------------CSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTTTTTTHHHHGG-G
T ss_pred             --ccCCC--------------chHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccccchhHHHHHHh-c
Confidence              10000              134999998544    45555  33 3599999999999843211111111111111 1


Q ss_pred             ceeeeehhhHhhhhhhHHHHH
Q 027007          192 DLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~l~~  212 (229)
                        ..+...++|++.++.||-.
T Consensus      2360 --~~r~~~PeEIA~avlfLaS 2378 (3089)
T 3zen_D         2360 --GVTTYTTDEMAAMLLDLCT 2378 (3089)
T ss_dssp             --SCBCEEHHHHHHHHHHTTS
T ss_pred             --CCCCCCHHHHHHHHHHHhC
Confidence              1234489999998888754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.60  E-value=1.9e-15  Score=151.70  Aligned_cols=158  Identities=15%  Similarity=0.123  Sum_probs=119.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCC-------CC-CCCCeEEEEccCCChhhHHhhcC------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACF------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~-------~~-~~~~~~~~~~D~~~~~~~~~~~~------~~   66 (229)
                      ++|||||+|+||+++++.|+++|++ |++++|+..+.+.       +. ....+..+.+|++|.+++.++++      .+
T Consensus      1886 ~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~i 1965 (2512)
T 2vz8_A         1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPV 1965 (2512)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCE
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999987 7888887654321       11 12357788999999998877653      58


Q ss_pred             cEEEEeCccc------CCCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           67 HVIFHTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        67 d~vi~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |+||||||..      +.+.++|++.+++|+.|++++.+++.+.+. .++||++||..+..+.++              .
T Consensus      1966 d~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g--------------~ 2031 (2512)
T 2vz8_A         1966 GGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG--------------Q 2031 (2512)
T ss_dssp             EEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT--------------C
T ss_pred             cEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC--------------c
Confidence            9999999973      224567889999999999999998877542 369999999876654332              2


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCCCeEEEecCceec
Q 027007          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYG  173 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g  173 (229)
                      ..|+.+|...+.+++.....|++...+..|.+-+
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence            3499999999999998888899999998887644

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.30  E-value=6.9e-12  Score=103.85  Aligned_cols=167  Identities=13%  Similarity=0.079  Sum_probs=104.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcC----CCCCC----CCCCCCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRR----TSDIS----GLPSEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~----~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||+||||+|++|++++..|+.+|.       +|++++++    .++.+    ++... ...+ ..|+....+..+++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-AFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-TCTT-EEEEEEESSHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-cccc-cCcEEEecCcHHHhCC
Confidence            5899999999999999999999885       89999887    32111    01110 0011 2356556677888999


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC-CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      +|+|||+||.......+..+++..|+..+.++++.+.++. +..++|++|.-......  .......-.++   ...++.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~--~~~~~~~~~p~---~~v~g~  158 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY--IAMKSAPSLPA---KNFTAM  158 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH--HHHHTCTTSCG---GGEEEC
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH--HHHHHcCCCCH---HHEEEe
Confidence            9999999997554444556789999999999999999984 55589998862211000  00000000000   012555


Q ss_pred             HHHHHHHHHHHHHhc-CCCeEEEecCceecC
Q 027007          145 SKAVADKIALQAASE-GLPIVPVYPGVIYGP  174 (229)
Q Consensus       145 sK~~~e~~~~~~~~~-gi~~~~irpg~i~g~  174 (229)
                      ++....++...+++. |++..-++.-.++|.
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence            555455555555433 666555665556664

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.28  E-value=3.5e-12  Score=89.37  Aligned_cols=87  Identities=22%  Similarity=0.187  Sum_probs=70.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (229)
                      |+|+|+|+ |++|+++++.|.+.| ++|++++|++++.+.+. ..++..+.+|+++.+++.++++++|+|||+++..   
T Consensus         6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~---   80 (118)
T 3ic5_A            6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF---   80 (118)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG---
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch---
Confidence            47999999 999999999999999 99999999875544332 2356788999999999999999999999998531   


Q ss_pred             CCCchhhhHhhHHHHHHHHHHHHhcC
Q 027007           80 LPDPSRFFAVNVEGLKNVVQAAKETK  105 (229)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (229)
                                   .+..+++++.+.+
T Consensus        81 -------------~~~~~~~~~~~~g   93 (118)
T 3ic5_A           81 -------------LTPIIAKAAKAAG   93 (118)
T ss_dssp             -------------GHHHHHHHHHHTT
T ss_pred             -------------hhHHHHHHHHHhC
Confidence                         1356777777764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.26  E-value=4.2e-11  Score=99.80  Aligned_cols=163  Identities=9%  Similarity=-0.099  Sum_probs=102.7

Q ss_pred             EEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCCCCCCCCCC-----------------CCCeEEEEccCCChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPS-----------------EGALELVYGDVTDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~D~~~~~~~~~~~   63 (229)
                      ++|||||++++|.+.+..|+ ..|..|+++.+..+..+....                 ......+.+|+++.+++.+++
T Consensus        52 ~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi  131 (401)
T 4ggo_A           52 NVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVI  131 (401)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHH
Confidence            69999999999999999998 679999999987654432110                 146788999999999887665


Q ss_pred             C-------CccEEEEeCcccCCCC---------------------------CCchh-----hhHhhHHHHHH--------
Q 027007           64 F-------GCHVIFHTAALVEPWL---------------------------PDPSR-----FFAVNVEGLKN--------   96 (229)
Q Consensus        64 ~-------~~d~vi~~a~~~~~~~---------------------------~~~~~-----~~~~n~~~~~~--------   96 (229)
                      +       ++|+|||+++......                           +.+.+     .-+.++.+|..        
T Consensus       132 ~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s  211 (401)
T 4ggo_A          132 EEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWE  211 (401)
T ss_dssp             HHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHH
Confidence            4       5899999998631100                           00000     00112222222        


Q ss_pred             -HHHHHHhc--CC-CceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhc--CCCeEEEecCc
Q 027007           97 -VVQAAKET--KT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGV  170 (229)
Q Consensus        97 -l~~~~~~~--~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--gi~~~~irpg~  170 (229)
                       .+++....  +. ..++|.+|+....-..+  .+          ....+|.+|+..|..++.++..  +++++++.++.
T Consensus       212 ~w~~al~~a~lla~G~siva~SYiGse~t~P--~Y----------~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a  279 (401)
T 4ggo_A          212 RWIKQLSKEGLLEEGCITLAYSYIGPEATQA--LY----------RKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKG  279 (401)
T ss_dssp             HHHHHHHHTTCEEEEEEEEEEECCCCGGGHH--HH----------TTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred             HHHHHHHhhhcccCCceEEEEeccCcceeec--CC----------CccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCc
Confidence             12222222  11 23777777643211111  01          0124799999988888887643  57899999999


Q ss_pred             eecCCC
Q 027007          171 IYGPGK  176 (229)
Q Consensus       171 i~g~~~  176 (229)
                      +-++-.
T Consensus       280 ~vT~As  285 (401)
T 4ggo_A          280 LVTRAS  285 (401)
T ss_dssp             CCCTTG
T ss_pred             cccchh
Confidence            988743

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.22  E-value=2.1e-11  Score=100.85  Aligned_cols=112  Identities=16%  Similarity=0.135  Sum_probs=80.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCC--CCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDI--SGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~--~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||+||||+|++|.+++..|+.+|  ++|++++++++..  .++... .... +.. +.+..++.++++++|+|||+|+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~gaDvVi~~ag~   86 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV-VRG-FLGQQQLEAALTGMDLIIVPAGV   86 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCE-EEE-EESHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccce-EEE-EeCCCCHHHHcCCCCEEEEcCCc
Confidence            699999999999999999999998  8999999765410  001110 0111 121 23456778889999999999997


Q ss_pred             cCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ......+...++..|+.++..+++.+.++. ++.+|+++|
T Consensus        87 ~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           87 PRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            543333445779999999999999999986 456666665

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.16  E-value=2.1e-11  Score=99.79  Aligned_cols=107  Identities=17%  Similarity=0.145  Sum_probs=75.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEc--CCCCCCC----CC----CCCCeEEEEccCCChhhHHhhcCCccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~   68 (229)
                      |||+||||+|++|++++..|+.+|.  ++.++++  ++++.+.    +.    ....+++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            8999999999999999999998875  6888887  4432110    00    001122221 1  1    455789999


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |||+|+...........++..|+.++..+++++.++. ++.+|+++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeC
Confidence            9999997543333445679999999999999999985 456666655

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.16  E-value=6.7e-11  Score=97.24  Aligned_cols=112  Identities=14%  Similarity=0.122  Sum_probs=77.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEc--CCCCCCC----CCCC-CCeEEEEccCCCh-hhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDISG----LPSE-GALELVYGDVTDY-RSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~----~~~~-~~~~~~~~D~~~~-~~~~~~~~~~d~vi   70 (229)
                      |||+||||+|++|++++..|+.+|.  ++.++++  +.++.+.    +... ... -...++++. +++.++++++|+||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~l~~al~gaD~Vi   79 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-RSDANIYVESDENLRIIDESDVVI   79 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-CCCCEEEEEETTCGGGGTTCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhc-CCCeEEEeCCcchHHHhCCCCEEE
Confidence            8999999999999999999998884  6888887  4321110    0000 000 001123222 23567789999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |+||.......+...++..|+.++.++++++.++.  +++|+++|
T Consensus        80 ~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S  122 (313)
T 1hye_A           80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT  122 (313)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS
T ss_pred             ECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence            99997543334456789999999999999999986  55555555

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.03  E-value=5.5e-11  Score=96.58  Aligned_cols=75  Identities=21%  Similarity=0.271  Sum_probs=61.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++||||+|++|++++++|+++|++|++++|+.++.+.+...    .+++++.+|+++.+++.++++++|+||||++.
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCc
Confidence            3699999999999999999999999999999986543322110    13456789999999999999999999999975

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.91  E-value=4.2e-09  Score=86.49  Aligned_cols=111  Identities=20%  Similarity=0.148  Sum_probs=80.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCC---hhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTD---YRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~---~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|+|++|++|..++..|+..|  .+|+++++++.+..  ++.....    ..++..   ..++.++++++|+||+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~----~~~l~~~~~t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET----RATVKGYLGPEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS----SCEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc----CceEEEecCCCCHHHHhCCCCEEEECC
Confidence            899999999999999999999888  79999999761100  1111000    012221   245777789999999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      +.......+..+.+..|+..+..+++.+.++.+..++|++|.
T Consensus        77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            975433344456789999999999999998865557887654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.87  E-value=1.1e-08  Score=79.92  Aligned_cols=73  Identities=25%  Similarity=0.385  Sum_probs=53.9

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH----H
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~----~   60 (229)
                      |+||||||                +|++|.+++++++++|++|++++|+.......+  .++..+  |+...++.    .
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~--~~~~~~--~v~s~~em~~~v~   79 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPH--PNLSIR--EITNTKDLLIEMQ   79 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCC--TTEEEE--ECCSHHHHHHHHH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCC--CCeEEE--EHhHHHHHHHHHH
Confidence            68999999                999999999999999999999999753211111  245444  45555443    4


Q ss_pred             hhcCCccEEEEeCcccC
Q 027007           61 DACFGCHVIFHTAALVE   77 (229)
Q Consensus        61 ~~~~~~d~vi~~a~~~~   77 (229)
                      +.+.++|++||+|++.+
T Consensus        80 ~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           80 ERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHGGGCSEEEECSBCCS
T ss_pred             HhcCCCCEEEEcCcccc
Confidence            44567999999999754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.83  E-value=4.1e-09  Score=90.67  Aligned_cols=73  Identities=18%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|+| +|++|+++++.|++.|++|++++|+.++.+.+... ..+..+.+|++|.+++.++++++|+|||+++.
T Consensus         5 ~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~   78 (450)
T 1ff9_A            5 SVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY   78 (450)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence            699997 89999999999999999999999986654433322 24678899999999999999999999999975

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.81  E-value=7.2e-09  Score=86.87  Aligned_cols=92  Identities=17%  Similarity=0.217  Sum_probs=71.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (229)
                      |||+|.|+ |++|+.+++.|.+ .++|.+.+++.++++.+.+  .+..+..|+.|.+++.++++++|+||+++++.    
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~----   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMKEFELVIGALPGF----   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG----
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc----
Confidence            89999997 9999999998865 5899999998665544433  46678899999999999999999999998641    


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                            +      ...++++|.+++  .++|=+|
T Consensus        89 ------~------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           89 ------L------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             ------G------HHHHHHHHHHHT--CEEEECC
T ss_pred             ------c------cchHHHHHHhcC--cceEeee
Confidence                  1      135677777775  2665443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.76  E-value=9.9e-09  Score=73.98  Aligned_cols=99  Identities=18%  Similarity=0.251  Sum_probs=71.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCcccCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPWL   80 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~~~~~~~   80 (229)
                      +|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+... ....+.+|.++.+.+.++ ++++|+||++++.     
T Consensus         8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~-----   80 (144)
T 2hmt_A            8 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA-----   80 (144)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS-----
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC-----
Confidence            5999997 9999999999999999999999986554443332 446788999998888776 6789999998752     


Q ss_pred             CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                       +    .+.|.    .+++.++... .++++..++..
T Consensus        81 -~----~~~~~----~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           81 -N----IQAST----LTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             -C----HHHHH----HHHHHHHHTT-CSEEEEECCSH
T ss_pred             -c----hHHHH----HHHHHHHHcC-CCeEEEEeCCH
Confidence             1    12333    2444555554 45777666543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.75  E-value=5e-09  Score=75.27  Aligned_cols=73  Identities=22%  Similarity=0.310  Sum_probs=57.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+....++..+.+|.++.+.+.+. ++++|+||++.+
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            79999986 99999999999999999999999765443322111456788999988887655 678999999963

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.74  E-value=5.4e-09  Score=75.55  Aligned_cols=71  Identities=23%  Similarity=0.239  Sum_probs=58.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      +++|+|+ |.+|+++++.|.++|++|+++++++++.+.+.. ..+.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         8 ~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            8 EYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            6899996 999999999999999999999998765443322 2567889999999998876 457999998764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.73  E-value=2e-09  Score=89.04  Aligned_cols=111  Identities=17%  Similarity=0.097  Sum_probs=78.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEEcCCC--CCC----CCCC--CCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--S-----VRALVRRTS--DIS----GLPS--EGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~-----V~~~~r~~~--~~~----~~~~--~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||+||||+|+||++++..|+..|.  +     +.++++++.  +.+    ++..  .+...    ++....+..+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhCC
Confidence            6899999999999999999998874  5     899988631  110    1110  01111    22222344566889


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCc-eEEEEcc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSS  115 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~~sS  115 (229)
                      +|+||++||.......+..+.++.|+..+..+++.+.++.... +++.+|.
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999999997543334556789999999999999999986544 5777664

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.73  E-value=6.6e-08  Score=75.25  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=53.3

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh--
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--   62 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--   62 (229)
                      ++||||||                +|++|.+++++|+++|++|++++++.. ++ .+  .++.  ..|+++.+++.+.  
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~~--~g~~--~~dv~~~~~~~~~v~   82 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-TP--PFVK--RVDVMTALEMEAAVN   82 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-CC--TTEE--EEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-cC--CCCe--EEccCcHHHHHHHHH
Confidence            47999999                699999999999999999999988652 21 11  1333  4688887665443  


Q ss_pred             --cCCccEEEEeCccc
Q 027007           63 --CFGCHVIFHTAALV   76 (229)
Q Consensus        63 --~~~~d~vi~~a~~~   76 (229)
                        +.++|++|||||+.
T Consensus        83 ~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           83 ASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHGGGCSEEEECCBCC
T ss_pred             HhcCCCCEEEECCccc
Confidence              45799999999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.68  E-value=7.5e-08  Score=70.72  Aligned_cols=73  Identities=23%  Similarity=0.312  Sum_probs=59.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+....+...+.+|.++.+.+.++ ++++|+||.+.+
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            58999985 99999999999999999999999887766554223556788999888877765 678999998864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.67  E-value=6.4e-09  Score=88.38  Aligned_cols=74  Identities=20%  Similarity=0.291  Sum_probs=60.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcCC--ccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFG--CHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~--~d~v   69 (229)
                      |+|+|+|+ |++|+++++.|++.|   .+|++.+|+.++.+.+..      ...+..+.+|++|.+++.+++++  +|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            48999998 999999999999998   389999998765433211      02478889999999999999887  8999


Q ss_pred             EEeCcc
Q 027007           70 FHTAAL   75 (229)
Q Consensus        70 i~~a~~   75 (229)
                      ||++++
T Consensus        81 in~ag~   86 (405)
T 4ina_A           81 LNIALP   86 (405)
T ss_dssp             EECSCG
T ss_pred             EECCCc
Confidence            999974

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.61  E-value=1.1e-08  Score=88.28  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=60.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|+|+ |++|+++++.|++. |++|++++|+.++.+.+....++..+.+|+.|.+++.++++++|+|||+++.
T Consensus        25 ~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           25 NVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             EEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             EEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            6999997 99999999999998 7899999998665443321124567789999999999989999999999875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.57  E-value=2e-08  Score=78.10  Aligned_cols=72  Identities=17%  Similarity=0.174  Sum_probs=60.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+....++.++.+|.++.+.+.++ ++++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            89999995 99999999999999999999999876554432222567899999999999886 67899999665

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.47  E-value=5.9e-08  Score=80.38  Aligned_cols=112  Identities=13%  Similarity=0.073  Sum_probs=73.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||.|+|++|++|+.++..++..|  .+|+++|.+.++.+.    +....   +...++.-..+..++++++|+||.+||
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~---~~~~~i~~t~d~~~al~dADvVvitaG   85 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG---FEGLNLTFTSDIKEALTDAKYIVSSGG   85 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC---CTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc---CCCCceEEcCCHHHHhCCCCEEEEccC
Confidence            589999999999999999999998  589999986543221    10000   000112112345566789999999999


Q ss_pred             ccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCce-EEEEcc
Q 027007           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTSS  115 (229)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-iv~~sS  115 (229)
                      .......+....+..|+.....+++.+.++.+... ++.+|.
T Consensus        86 ~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           86 APRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            74333234456799999999999999998864443 556553

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.44  E-value=1.3e-07  Score=69.30  Aligned_cols=72  Identities=22%  Similarity=0.314  Sum_probs=57.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCCCC--CCCeEEEEccCCChhhHHhh-cCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~   74 (229)
                      +++|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+.+..  ..++.++.+|.++++.+.++ ++++|.||-+.+
T Consensus         5 ~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            6999985 9999999999999999999999974 22111110  12578899999999999876 788999997753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.39  E-value=5e-07  Score=68.07  Aligned_cols=72  Identities=17%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh--cCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--CFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~vi~~a~   74 (229)
                      |+|+|+| .|.+|+.+++.|.+. |++|+++++++++.+.+.. .++..+.+|.++.+.+.++  ++++|+||.+.+
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            4799998 699999999999999 9999999998765443322 2456788999999888887  778999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.34  E-value=9.7e-07  Score=72.63  Aligned_cols=107  Identities=18%  Similarity=0.290  Sum_probs=75.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC----C-CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----E-GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~-~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++.+.    +..    . ..++....|   .    +.++++|+|
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~aDvV   77 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKDADIV   77 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCCCCEE
Confidence            58999995 9999999999999986  89999987543221    110    0 123333222   2    457899999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |.++|.......+....+..|+.....+++.+.++.+...++.+|.
T Consensus        78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9999874333334456789999999999999998865456666653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.30  E-value=3.5e-07  Score=65.99  Aligned_cols=70  Identities=17%  Similarity=0.201  Sum_probs=57.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +|+|.|. |.+|+.+++.|.+.|++|+++++++++.+.+.. .++..+.+|.++++.+.++ ++++|.||-+.
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            6899995 999999999999999999999998765544332 2677899999999988775 56789998775

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.28  E-value=1.5e-06  Score=70.57  Aligned_cols=108  Identities=20%  Similarity=0.163  Sum_probs=77.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC----C-CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----E-GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~-~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|.+++..|+..|+  +|++.++++++.+.    +..    . ...++...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            99999998 9999999999999987  99999998654320    000    0 01122211  12    4567899999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |.++|.......+....+..|..-...+++.+.++.+...++.+|.
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            9999875333334556789999999999999998865456666663

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.26  E-value=3.5e-07  Score=75.23  Aligned_cols=107  Identities=12%  Similarity=0.129  Sum_probs=64.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCC-------CCCC-CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-------GLPS-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|++++..|+..|.  +++++++++++.+       .... ...+.....|       .+.++++|+||
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDiVv   81 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCEEE
Confidence            68999995 9999999999999886  8999998654322       1110 0123333222       24578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+||.....-.+....++.|+.-...+++.+.++.+...++.+|.
T Consensus        82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             ECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            999974332233456789999999999999998865456666553

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.26  E-value=3.1e-07  Score=70.04  Aligned_cols=72  Identities=17%  Similarity=0.220  Sum_probs=49.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhh---HHhhcC--CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~d~vi~~a~   74 (229)
                      ++|+|+||+|+||.++++.+...|++|++++|++++.+.+... +... ..|.++.+.   +.+...  ++|+||+++|
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-GVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            3799999999999999999999999999999976543222111 1111 236655433   333332  5899999986

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=98.24  E-value=1.1e-06  Score=71.84  Aligned_cols=108  Identities=20%  Similarity=0.165  Sum_probs=73.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++.+.    +..     .........|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            99999996 9999999999999886  89999998754321    110     0012222112  2    2457889999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |.+||.......+....+..|+.-...+.+.+.++.+...++.+|.
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            9999875333334567899999999999999998865456666653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=98.24  E-value=7.9e-07  Score=72.04  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=76.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC----CCCC-----CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS----GLPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~----~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+| +|+||+.++..|+.++  .++.++|.++++.+    ++..     .........+  |+    +.++++|+|
T Consensus         1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            9999999 5999999999998887  48999998753211    0100     0011222221  33    346889999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |-+||.....-.+.++.++.|..-...+.+.+.++.+...++.+|.
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            9999976544456678899999999999999999865445665553

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.20  E-value=2.9e-06  Score=69.38  Aligned_cols=111  Identities=24%  Similarity=0.171  Sum_probs=75.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-C--CeEEEEEcCCCCCC----CCCCCC-CeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-G--HSVRALVRRTSDIS----GLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g--~~V~~~~r~~~~~~----~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |||.|+||+|.+|++++..|..+ +  .++++++.++ +.+    ++.... ....... .+  .+..+.++++|+||-+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            89999999999999999998875 4  5899999875 211    111111 1121110 00  1123456899999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ||.....-.+..+.++.|..-...+.+.+.++.+...++.+|.
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9975433345567899999999999999988865456666653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.19  E-value=1.5e-07  Score=72.56  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=49.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEE-ccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||+|+||+|.+|+++++.|++.|++|++.+|++++.+.+...... .+. .|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            8999999999999999999999999999999976543322110000 000 1222 2345556678999999874

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.19  E-value=5.9e-07  Score=70.37  Aligned_cols=69  Identities=14%  Similarity=0.062  Sum_probs=58.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+++|+|+ |.+|+.+++.|.+.|+ |+++++++++.+.+.  .++.++.+|.++++.+.++ ++++|.||.+.
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence            47999996 9999999999999999 999999876544333  2578899999999999877 78899999775

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.16  E-value=5.7e-06  Score=67.92  Aligned_cols=106  Identities=20%  Similarity=0.182  Sum_probs=70.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCCC----CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|.  +|+++|.++++.+.    +...    ..+++. .  .+    .++++++|+||
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDvVi   79 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDVIV   79 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCEEE
Confidence            58999997 9999999999999986  99999998765442    1110    122221 1  12    34578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .+++.......+..+.+..|+.....+++.+.++.+...++.+|
T Consensus        80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99987432223345678999999999999998875444555543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.15  E-value=5.1e-06  Score=68.22  Aligned_cols=107  Identities=20%  Similarity=0.217  Sum_probs=75.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCCC-----CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+| +|.+|.+++..|+..|. +|+++++++++.+.    +...     ...++...+  |.    ++++++|+||
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~aDvVI   78 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLENSDVVI   78 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCCCCEEE
Confidence            5899999 59999999999999987 99999998764321    1110     011221111  22    4678999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .+++.......+....+..|+.....+++.+.++.+...++.+|
T Consensus        79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99987543333455678999999999999998886444666665

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.14  E-value=1.8e-06  Score=69.33  Aligned_cols=73  Identities=23%  Similarity=0.235  Sum_probs=43.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-CCCeEEEE-EcCCCCC--CCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLK-QGHSVRAL-VRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~-~g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|+|++|.+|+.+++.+.+ .|++++++ ++++++.  ..+....++.  ..++...+++.++++++|+||+.+.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~~DvVIDft~p   82 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTRP   82 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSCH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcCCCEEEEcCCh
Confidence            6899999999999999998875 57888754 4443321  1111100000  11222223344555678999987753

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.13  E-value=3.9e-06  Score=68.98  Aligned_cols=108  Identities=19%  Similarity=0.212  Sum_probs=73.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|.+++..|+..|+ +|+++++++++.+.    +..     ....++...  +|.    ++++++|+||
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a~~~aDiVI   80 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AAIEGADVVI   80 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HHHCCCCEEE
Confidence            58999997 9999999999999998 99999998765321    100     001111111  122    5678999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .++|.......+....+..|+.-...+++.+.++.+...++.+|.
T Consensus        81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            999864332233456788999999999999988864446666653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.12  E-value=4.7e-07  Score=75.93  Aligned_cols=73  Identities=12%  Similarity=0.116  Sum_probs=56.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|+|+|+ |.||+.+++.+...|++|++++|++++.+.+....+.. +.+|.++.+++.++++++|+||++++.
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            47999998 99999999999999999999999865432211100111 456777888898888899999999875

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=98.12  E-value=2.4e-06  Score=70.34  Aligned_cols=108  Identities=18%  Similarity=0.173  Sum_probs=76.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC---C-CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS---E-GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~---~-~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+.+|.  +|++++++.++.+.    +..   . .....+..+  |++    .++++|+||
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aDiVv   92 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSKLVI   92 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCCEEE
Confidence            68999996 9999999999999986  89999987543221    100   0 011222221  332    478999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+||.....-.+..+.++.|+.-...+.+.+.++.+...++.+|.
T Consensus        93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999975443345667899999999999999998865456666664

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.10  E-value=3.7e-06  Score=68.74  Aligned_cols=107  Identities=17%  Similarity=0.125  Sum_probs=68.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCCC-----CCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+ +|+++++++++++.    +...     ...++..     ..+. +.++++|+||
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~Vi   75 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNY-ADTANSDVIV   75 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCCEEE
Confidence            48999998 9999999999999996 89999987654321    0000     0111111     0122 4578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+++.......+....+..|+.....+.+.+.++. +..++.+.|
T Consensus        76 ~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  119 (309)
T 1ur5_A           76 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVN  119 (309)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence            99986432222234567888888899999998885 444444443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.09  E-value=9.9e-06  Score=66.85  Aligned_cols=112  Identities=17%  Similarity=0.094  Sum_probs=72.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCC--CCCeEE--EEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--EGALEL--VYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--~~~~~~--~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|+|+ |.+|..++..|+..|+ +|++.++++++++....  ......  ....+.-..++.++++++|+||-+++.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~   88 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL   88 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence            68999997 9999999999999998 99999998754332000  000000  001111113344567899999999986


Q ss_pred             cCCCCC-----CchhhhHhhHHHHHHHHHHHHhcCCCceEEEE
Q 027007           76 VEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (229)
Q Consensus        76 ~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~  113 (229)
                      ......     +-...+..|+.-...+.+.+.++.+...++.+
T Consensus        89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  131 (331)
T 1pzg_A           89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  131 (331)
T ss_dssp             SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            432212     33456788888889999988887633344443

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.05  E-value=4.9e-06  Score=68.11  Aligned_cols=107  Identities=17%  Similarity=0.189  Sum_probs=74.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC--CCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT--SDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~--~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      ||.|+|+ |.+|..++..|+..|+ +|+++++++  ++.+.    +..     ....++...  +|.    +.++++|+|
T Consensus        10 kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aDvV   82 (315)
T 3tl2_A           10 KVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY----ADTADSDVV   82 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH----HHhCCCCEE
Confidence            7999996 9999999999999999 999999983  22110    000     001111111  122    457899999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      |-++|.......+....+..|+.....+.+.+.++.+...++.+|.
T Consensus        83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            9999875433344567899999999999999988864446666663

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.03  E-value=3.8e-05  Score=63.50  Aligned_cols=108  Identities=15%  Similarity=0.124  Sum_probs=73.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCC---------CCCCCCCCCeEEEEccCCChhhHHhhcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD---------ISGLPSEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~---------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      ||.|+||+|.||++++..|+....       ++.+++..+..         +...........+..+     +..+++++
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a~~~  100 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVAFDG  100 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHHTTT
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHHhCC
Confidence            899999999999999998887642       78888875421         1111110111222221     23466899


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCc-eEEEEc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~~s  114 (229)
                      +|+||-+||.....-.+.++.++.|..-...+.+.+.++..+. +++.+|
T Consensus       101 advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A          101 VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            9999999998654445567889999999999999998864333 455555

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=98.02  E-value=6.6e-06  Score=67.27  Aligned_cols=107  Identities=21%  Similarity=0.163  Sum_probs=72.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCCC----CCC-----CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGL----PSE-----GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~----~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|..++..|+..  |++|+++++++++++.+    ...     ....+..  .+|.   .+ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~---~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDY---AD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCG---GG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCH---HH-HCCCCEE
Confidence            89999997 99999999999985  79999999987643321    000     0111111  0223   23 6889999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+++............+..|+.....+++.+.++.+...++.++
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999875322222234567889888889999888875444666654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.02  E-value=3e-06  Score=70.31  Aligned_cols=71  Identities=23%  Similarity=0.255  Sum_probs=50.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|++|++++|++++.+.+... +... ..|+++.+++.+.+.     ++|+||+++|
T Consensus       172 ~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          172 WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI-GGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT-TCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc-CCce-EEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            699999999999999999999999999999987654322111 1221 236664444433322     5899999987

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=98.00  E-value=4.9e-05  Score=61.92  Aligned_cols=106  Identities=16%  Similarity=0.196  Sum_probs=67.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+  +|+++++++++.+.    +..    ....++.. +  +.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence            89999997 9999999999999998  99999997642211    000    01122221 1  22    4578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .+++.......+..+.+..|+.....+++.+.++.+...++.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99976332222334578899999999999888875333555544

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.99  E-value=1.5e-06  Score=75.04  Aligned_cols=72  Identities=22%  Similarity=0.398  Sum_probs=60.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |||+|.|+ |-+|+.+++.|.++|++|+++++++++++.+...-.+..+.+|.++++.++++ ++++|.+|-+.
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t   76 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT   76 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence            89999995 99999999999999999999999887665543323577899999999999887 56799988543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.98  E-value=3.3e-06  Score=69.31  Aligned_cols=107  Identities=14%  Similarity=0.201  Sum_probs=70.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|.+++..|+..+.  +++++++++++++.    +..    ...+++. .|  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HHHhCCCCEEE
Confidence            58999998 9999999999998875  89999987543221    000    0122222 22  2    34578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+++.......+..+.+..|+.....+++.+.++.+...++.+|.
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            999874322223346788999999999999988865556766643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.97  E-value=5.9e-06  Score=67.58  Aligned_cols=107  Identities=14%  Similarity=0.122  Sum_probs=75.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|.+++..|+..+  .+++++++++++++.    +..    ...+++.. |  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            89999997 999999999999887  689999987543221    100    01222222 2  2    34578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+++.......+....+..|......+++.+.++.+...++.+|.
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            999874333234456788999999999999988865556766643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.97  E-value=2.4e-06  Score=70.46  Aligned_cols=71  Identities=21%  Similarity=0.224  Sum_probs=49.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHH----hhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV----DAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|+||..+++.+...|++|+++++++++.+.+... +.. ...|.++.+++.    ++. .++|+||+++|
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            699999999999999999999999999999876543322111 111 124666533332    222 25899999997

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.96  E-value=9e-06  Score=69.09  Aligned_cols=71  Identities=24%  Similarity=0.377  Sum_probs=59.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+|+|+|. |-+|+.+++.|.+.|++|+++++++++.+.+.. .++..+.+|.++++.+.++ ++++|+||-+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence            67999995 999999999999999999999998765544332 2567899999999999887 67899998775

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.95  E-value=4e-06  Score=69.04  Aligned_cols=107  Identities=14%  Similarity=0.173  Sum_probs=72.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..+.  +++++++++++++.    +..    ...+++.. |  +    .++++++|+||
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDvVi   81 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999988875  89999986543211    100    01222222 2  2    34578999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      .+++.......+...++..|+.....+++.+.++.+...++.+|.
T Consensus        82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999874332233456788999999999999988865556776643

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.89  E-value=2e-05  Score=64.74  Aligned_cols=107  Identities=16%  Similarity=0.175  Sum_probs=70.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+ +|+++++++++++.    +..     ....++..     ..+. ++++++|+||
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~Vi   77 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADVVI   77 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEEE
Confidence            48999997 9999999999999997 99999988654321    000     00111111     1223 4578999999


Q ss_pred             EeCcccCCCCCC-----chhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPD-----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+++........     -...+..|+.-...+.+.+.+..+...++.+|
T Consensus        78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999864321111     34567788888888888888775433555544

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.89  E-value=5.3e-06  Score=67.88  Aligned_cols=73  Identities=14%  Similarity=0.191  Sum_probs=54.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---CCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +++|+|+ |++|++++..|++.|. +|++++|+   .++.+.+...    ..+.+...++.+.+++.+.+.++|+|||+.
T Consensus       156 ~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT  234 (315)
T 3tnl_A          156 KMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT  234 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence            6899996 8999999999999998 89999998   3333222110    122333456767778888888999999997


Q ss_pred             cc
Q 027007           74 AL   75 (229)
Q Consensus        74 ~~   75 (229)
                      +.
T Consensus       235 p~  236 (315)
T 3tnl_A          235 GV  236 (315)
T ss_dssp             ST
T ss_pred             cC
Confidence            64

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.85  E-value=1.4e-06  Score=69.88  Aligned_cols=70  Identities=19%  Similarity=0.178  Sum_probs=47.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CC-eEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GA-LELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~-~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      ++++|+|+ |++|+++++.|++.|++|++.+|+.++.+.+... .. ...   +..+.+++.+  .++|+|||+++..
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~---~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI---QALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE---EECCSGGGTT--CCCSEEEECCSCG
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe---eEecHHHhcc--CCCCEEEECCCCC
Confidence            47999997 7899999999999999999999986543322110 00 011   2223333322  5899999999863

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.84  E-value=1.7e-05  Score=63.69  Aligned_cols=66  Identities=17%  Similarity=0.162  Sum_probs=51.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|.+.|+ +|++.+|+.++.+.+..  .+..     ...+++.+++.++|+|||+.+.
T Consensus       119 ~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~~~-----~~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          119 YILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NINK-----INLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CCEE-----ECHHHHHHTGGGCSEEEECCC-
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hccc-----ccHhhHHHHhcCCCEEEECccC
Confidence            6899996 8999999999999998 89999999887776654  2221     1355677777889999998754

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.83  E-value=9e-05  Score=60.86  Aligned_cols=108  Identities=18%  Similarity=0.129  Sum_probs=75.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CC---C-CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LP---S-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~---~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|.  +|+++++++++.+.    +.   . .........  +|++    .++++|+||
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d~~----~~~daDiVI   94 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KDYS----VSAGSKLVV   94 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SSSC----SCSSCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CCHH----HhCCCCEEE
Confidence            68999998 9999999999999986  89999987543211    00   0 001122211  1222    268999999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      -+||.....-.+..+.+..|+.-...+++.+.++.+...++.+|.
T Consensus        95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999975443344567899999999999999988864456666653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.81  E-value=1.3e-05  Score=65.65  Aligned_cols=106  Identities=16%  Similarity=0.247  Sum_probs=70.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC--------CCCC-CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG--------LPSE-GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~--------~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|..++..|+..|.  +|+++++++++.+.        .... ..+++.. |  +    .++++++|+|
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aDvV   78 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDADLV   78 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCCEE
Confidence            58999998 9999999999988774  89999987542211        0000 0222222 1  2    2457899999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+++.......+....+..|..-...+++.+.++.+...++.+|
T Consensus        79 iia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           79 VICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999987433223345668888888888888888875433455443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.80  E-value=3.9e-05  Score=62.91  Aligned_cols=106  Identities=14%  Similarity=0.228  Sum_probs=72.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CC----CC-CCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SE-GALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~-~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|.+++..|+.+|  .+|.+++.++++.+.    +.    .. ..+++. .|  +    .++++++|+|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~aDvV   78 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDADLV   78 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCCCEE
Confidence            48999998 999999999999888  489999887532221    00    00 122222 22  2    3457899999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |.+++.......+....+..|+.-...+++.+.++.+...++.+|
T Consensus        79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999987433323445678899999999999998886444666544

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.80  E-value=5.1e-05  Score=62.15  Aligned_cols=108  Identities=20%  Similarity=0.182  Sum_probs=70.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC----C-----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP----S-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+ +|++.++++++++...    .     .....+...  +|   . ++++++|+||
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~~aDiVi   77 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADISGSDVVI   77 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEEE
Confidence            58999997 9999999999999998 9999999875433210    0     000011110  12   2 4568899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      -+++..........+.+..|......+++.+.++.+...++.+|.
T Consensus        78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999864332233445667777777888888877754334555544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.78  E-value=4.2e-06  Score=68.80  Aligned_cols=71  Identities=13%  Similarity=0.096  Sum_probs=48.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhh---HHhhcC--CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~d~vi~~a~   74 (229)
                      +|||+||+|+||..+++.+...|++|++++|++++.+.+... +... ..|.++.+.   +.+...  ++|+||+++|
T Consensus       143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQ-VINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            699999999999999999999999999999976543322111 1111 235554433   333332  5899999997

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.76  E-value=6.7e-06  Score=68.03  Aligned_cols=71  Identities=17%  Similarity=0.146  Sum_probs=48.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-CCCCeEEEEccCCChh----hHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYR----SLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~----~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+. .. +... ..|.++.+    .+.++. .++|+||+++|
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-GFDD-AFNYKEESDLTAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-CCSE-EEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCce-EEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence            6999999999999999999999999999998765433221 11 1111 22554432    233332 25899999986

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.75  E-value=1.1e-05  Score=66.41  Aligned_cols=105  Identities=17%  Similarity=0.103  Sum_probs=70.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC-----------CCCCeEEEEccCCChhhHHhhcCCccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~d~   68 (229)
                      |||.|+|+ |.+|..++..|+..|+ +|++.++++++++...           ...+++..    +   +. ++++++|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~---d~-~al~~aD~   85 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----N---NY-EYLQNSDV   85 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----S---CG-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----C---CH-HHHCCCCE
Confidence            58999997 9999999999999998 9999999876433210           00111111    1   23 45789999


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ||-+++............+..|+.-...+.+.+.+..+...++.+|
T Consensus        86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999976432212233567788888888888888775333455444

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.75  E-value=5.5e-06  Score=68.25  Aligned_cols=72  Identities=13%  Similarity=0.118  Sum_probs=49.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|||+||+|++|..+++.+...|++|++++|++++.+.+... +... ..|.++.+   .+.+..  .++|+||+++|.
T Consensus       148 ~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~  224 (333)
T 1wly_A          148 YVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GCHH-TINYSTQDFAEVVREITGGKGVDVVYDSIGK  224 (333)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence            689999999999999999999999999999986443322111 1111 23555433   333333  258999999973

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.74  E-value=1.1e-05  Score=67.14  Aligned_cols=71  Identities=17%  Similarity=0.156  Sum_probs=49.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhcC--CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|++|++++|++++.+.+... +... ..|..+.+   .+.+...  ++|+||+++|
T Consensus       173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          173 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc-CCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence            699999999999999999999999999999876543321111 1111 23555433   2333333  5999999987

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.73  E-value=7e-06  Score=68.30  Aligned_cols=72  Identities=22%  Similarity=0.237  Sum_probs=48.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhcC-CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF-GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~-~~d~vi~~a~   74 (229)
                      +|||+|++|+||..+++.+...|+ +|+++++++++.+.+...-+.. ...|..+.+   .+.+... ++|+||+|+|
T Consensus       163 ~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYFDNVG  239 (357)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence            699999999999999999999999 9999999764433221100111 123555432   2333322 5899999987

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.72  E-value=4.4e-05  Score=62.63  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=71.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCC--------CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+  +|+++++++++.+.+..        .....+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            89999997 9999999999999998  99999998643222110        00112211   232    3468899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+++........-...+..|+.....+++.+.++.+...+|.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99875332212234567788888888888888775334555554

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.67  E-value=1.5e-05  Score=65.70  Aligned_cols=69  Identities=13%  Similarity=0.059  Sum_probs=58.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      ++++|.|. |.+|+.++++|.++|+ |+++++++++.+ +.. .++.++.+|.+|++.+.++ ++++|.||-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            47999995 9999999999999999 999999887665 432 3678999999999999887 77899988764

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.64  E-value=1.3e-05  Score=68.85  Aligned_cols=108  Identities=19%  Similarity=0.206  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC------CCeE-EE-----EccCCChhhHHhhcCCccE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LV-----YGDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~-~~-----~~D~~~~~~~~~~~~~~d~   68 (229)
                      |||.|.| +|.+|..++..|++.|++|++.+|++++.+.+...      +... .+     ...+.-..+..++++++|+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            6899998 59999999999999999999999987543322110      0000 00     0011112244556678999


Q ss_pred             EEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ||-+.+......      -..++.....+++.+.++.+.+.+|...|
T Consensus        82 ViiaVptp~~~~------~~~dl~~v~~v~~~i~~~l~~g~iVV~~S  122 (450)
T 3gg2_A           82 IFIAVGTPAGED------GSADMSYVLDAARSIGRAMSRYILIVTKS  122 (450)
T ss_dssp             EEECCCCCBCTT------SSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             EEEEcCCCcccC------CCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence            998875421111      12333344455555555544445544433

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.62  E-value=3.6e-05  Score=59.44  Aligned_cols=64  Identities=23%  Similarity=0.210  Sum_probs=47.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|+| +|.+|+++++.|.+.|++|++.+|++++.+.+... +++..        +..++++++|+||.+..
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcee--------cHHHHHhCCCEEEECCC
Confidence            6899999 89999999999999999999999986543332221 22221        34456788999998864

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.62  E-value=4.4e-05  Score=63.71  Aligned_cols=111  Identities=14%  Similarity=0.077  Sum_probs=72.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--e---EEEEEcCCCCC----C----CCCCC--CCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--S---VRALVRRTSDI----S----GLPSE--GALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~---V~~~~r~~~~~----~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      +||.|+||+|.||++++-.|+..+.  +   +.+.+.+.+..    +    ++...  +...-+.  +.+  +-.+.+++
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~~d  108 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVFED  108 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHhCC
Confidence            3799999999999999999998763  2   66655433221    0    01110  1111111  111  22456789


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhc-CCCceEEEEcc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSS  115 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~iv~~sS  115 (229)
                      +|+||-+||.....-.+....++.|..-...+.+.+.++ .+...++.+|.
T Consensus       109 aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          109 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            999999998754333456678999999999999999875 44446666653

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.62  E-value=5.1e-05  Score=55.64  Aligned_cols=67  Identities=18%  Similarity=0.092  Sum_probs=48.9

Q ss_pred             CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCCh--hhHHhhcC------CccEEEEe
Q 027007            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDY--RSLVDACF------GCHVIFHT   72 (229)
Q Consensus         9 ~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~--~~~~~~~~------~~d~vi~~   72 (229)
                      +|.++.++++.|++.|++|++..|+.......+        ....+..+.+|++++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            467899999999999999999888654432211        112456678999999  88766543      12999999


Q ss_pred             Ccc
Q 027007           73 AAL   75 (229)
Q Consensus        73 a~~   75 (229)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.61  E-value=1.2e-05  Score=65.42  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=50.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|+ |++|++++..|++.|+ +|++.+|+.++.+.+...-....  .++.+.+++.+.+.++|+||++.+.
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence            47999996 8899999999999997 99999998655432211000000  0222345677778889999999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.59  E-value=2.8e-05  Score=64.60  Aligned_cols=72  Identities=7%  Similarity=-0.036  Sum_probs=49.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|||+||+|.||..+++.+...|++|++++|++++.+.+... +.. ...|..+.+   .+.+...  ++|++|+++|.
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL-GAA-AGFNYKKEDFSEATLKFTKGAGVNLILDCIGG  241 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCc-EEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence            689999999999999999999999999999876543322111 111 123554433   3333332  58999999973

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.58  E-value=2.2e-06  Score=61.95  Aligned_cols=69  Identities=16%  Similarity=0.153  Sum_probs=48.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++.+.+...-+...     ...+++.++++++|+||.+.+.
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-----VLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-----EECSCHHHHHHTCSEEEECSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-----EeecCHHHHhcCCCEEEEeCCC
Confidence            58999995 999999999999999999999998665433221101111     1233455566789999998764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.58  E-value=4.6e-05  Score=62.15  Aligned_cols=106  Identities=19%  Similarity=0.182  Sum_probs=69.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCCCCC---------CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+| +|.+|..++..|+.+|  ++|++.+|++++.+.+..         ...++...   +|.    +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~----~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW----AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG----GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH----HHhCCCCEE
Confidence            6899999 7999999999999999  799999998654322110         00122222   222    356889999


Q ss_pred             EEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+++....    ........+..|+.....+++.+.++.+...++.++
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999875321    112233567888888888888887765333555543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.57  E-value=3.7e-05  Score=63.58  Aligned_cols=73  Identities=23%  Similarity=0.258  Sum_probs=49.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+...+.-..+..+ .+. +.+.++..  ++|++|+++|.
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCch
Confidence            699999999999999999999999999999977654322211112233333 232 23444433  59999999873

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.57  E-value=2.4e-06  Score=69.16  Aligned_cols=71  Identities=14%  Similarity=0.068  Sum_probs=47.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCC-C----eEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-A----LELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~----~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|++ ++|+++++.|++.| +|++.+|+.++.+.+...- .    ...+.+|+.+.   .+.+.++|+|||+++.
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn~ag~  203 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIINATPI  203 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEECSCT
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEECCCC
Confidence            368999985 99999999999999 9999999865433221100 0    00012244332   3456789999999986


Q ss_pred             c
Q 027007           76 V   76 (229)
Q Consensus        76 ~   76 (229)
                      .
T Consensus       204 ~  204 (287)
T 1nvt_A          204 G  204 (287)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.56  E-value=0.00015  Score=57.27  Aligned_cols=71  Identities=20%  Similarity=0.196  Sum_probs=49.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCC--------------------------CCCCCeEEEEccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDV   53 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~D~   53 (229)
                      ++|+|.| .|++|+++++.|+..|. ++++++++.-....+                          .+...++.+..++
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            3799999 58999999999999996 899999875111000                          0111244555556


Q ss_pred             CChhhHHhhcCCccEEEEeC
Q 027007           54 TDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        54 ~~~~~~~~~~~~~d~vi~~a   73 (229)
                      + .+.+.+.++++|+||.+.
T Consensus       111 ~-~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          111 D-DAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             C-HHHHHHHHHTSSEEEECC
T ss_pred             C-HhHHHHHHhCCCEEEEeC
Confidence            4 456677788999999885

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.54  E-value=5.5e-05  Score=61.36  Aligned_cols=70  Identities=20%  Similarity=0.181  Sum_probs=49.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+... +... ..|..+.+++.+.++++|++|+ +|
T Consensus       128 ~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~-~~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          128 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GAEE-AATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TCSE-EEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCCE-EEECCcchhHHHHhcCceEEEE-CC
Confidence            699999999999999999999999999999977654432211 1221 1244441344444478999999 86

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.54  E-value=5.8e-05  Score=62.11  Aligned_cols=71  Identities=20%  Similarity=0.259  Sum_probs=48.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-CCCCCeEEEEccCCChh---hHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~~~~---~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.||..+++.+...|++|+++++++++.+.+ ... +... ..|..+.+   .+.+.. .++|+||+++|
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-GFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CCSE-EEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            699999999999999999999999999999886554332 111 1111 12444432   233332 35999999987

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.53  E-value=0.00015  Score=59.18  Aligned_cols=107  Identities=15%  Similarity=0.217  Sum_probs=73.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCC----CC-----CCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~----~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      ||.|+|+ |.+|..++..|+..|. +|+++++++++++..    ..     ....++...  +|.    ++++++|+||-
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aD~Vi~   73 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMRGSDIVLV   73 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhCCCCEEEE
Confidence            6889998 9999999999988887 799999986543210    00     001111110  122    45789999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      +++.....-.+....+..|+.-...+++.+.++.+...++.+|.
T Consensus        74 ~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           74 TAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             CCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             eCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99874433234456788999999999999888764446666653

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.50  E-value=2.5e-05  Score=63.86  Aligned_cols=106  Identities=16%  Similarity=0.141  Sum_probs=68.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCC--CC--CC----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS--GL--PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~--~~--~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|..++..|+..|+  +|++++|++++.+  .+  ..    .........  ++.    +.++++|+||
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~Vi   80 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVV   80 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEEE
Confidence            79999997 9999999999999998  9999999754322  00  00    001121111  122    3457899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEE
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~  113 (229)
                      -+++.......+....+..|+.....+++.+.+......++.+
T Consensus        81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~  123 (319)
T 1lld_A           81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI  123 (319)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            9987543222334567788888888888888776422244443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.48  E-value=5.1e-05  Score=60.14  Aligned_cols=66  Identities=20%  Similarity=0.295  Sum_probs=50.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|. +|++.+|+.++.+.+...  +...     ..+++.+.++++|+||++.+.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~--~~~~-----~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP--VKIF-----SLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS--CEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH--cccC-----CHHHHHhhhcCCCEEEECCCC
Confidence            5889985 9999999999999998 899999998776665542  2211     234566667889999998753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.47  E-value=1.4e-05  Score=66.82  Aligned_cols=70  Identities=13%  Similarity=0.164  Sum_probs=51.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|+|+ |.+|+.+++.+...|++|++++|++++.+.+...  ..+   ..+..+.+++.+.+.++|+||++++.
T Consensus       169 ~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          169 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV---ELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS---EEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCcee---EeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            7999998 9999999999999999999999986554332110  011   11223456777777899999999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.47  E-value=3.5e-05  Score=63.79  Aligned_cols=72  Identities=14%  Similarity=0.158  Sum_probs=49.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|||+|++|.+|..+++.+... |++|+++++++++.+.+... +... ..|..+.+   .+.++.  .++|+||+++|.
T Consensus       173 ~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          173 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GADY-VINASMQDPLAEIRRITESKGVDAVIDLNNS  250 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred             EEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCCE-EecCCCccHHHHHHHHhcCCCceEEEECCCC
Confidence            6999999999999999999998 99999999876543322111 1111 12444432   244544  369999999873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.43  E-value=0.00013  Score=58.79  Aligned_cols=65  Identities=17%  Similarity=0.214  Sum_probs=46.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|+|++|.+|+++++.|.+.|++|++.+|++++.+.+... ++     +.++   ..++++++|+||-+..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-GI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-TC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-CC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            5899999889999999999999999999999876543322111 11     1222   2345678999998763

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.43  E-value=4.9e-05  Score=62.04  Aligned_cols=73  Identities=11%  Similarity=0.204  Sum_probs=50.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---CCCCCCCCC----CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +++|+|+ |++|++++..|++.|. +|+++.|+   .++.+.+..    .........+..+.+.+.+.+.++|+|||+.
T Consensus       150 ~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaT  228 (312)
T 3t4e_A          150 TMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGT  228 (312)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECC
Confidence            6899996 9999999999999997 89999998   333332211    0112233345555444455667899999987


Q ss_pred             cc
Q 027007           74 AL   75 (229)
Q Consensus        74 ~~   75 (229)
                      +.
T Consensus       229 p~  230 (312)
T 3t4e_A          229 KV  230 (312)
T ss_dssp             ST
T ss_pred             cC
Confidence            64

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.43  E-value=6.4e-05  Score=62.66  Aligned_cols=71  Identities=20%  Similarity=0.170  Sum_probs=47.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+...+.-..+  |..+.   +.+.+.. .++|+||+++|
T Consensus       166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (362)
T 2c0c_A          166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPI--NYKTEPVGTVLKQEYPEGVDVVYESVG  240 (362)
T ss_dssp             EEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEE--ecCChhHHHHHHHhcCCCCCEEEECCC
Confidence            699999999999999999999999999999876543322111111222  33322   2233322 35899999986

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.41  E-value=0.00011  Score=60.59  Aligned_cols=72  Identities=14%  Similarity=0.184  Sum_probs=49.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+...+.-..+  |..+.   +.+.+...  ++|+||+++|.
T Consensus       147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVI--DTSTAPLYETVMELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEE--eCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence            699999999999999999988999999999987664432211111222  33332   23344332  59999999873

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.40  E-value=6.8e-05  Score=61.94  Aligned_cols=72  Identities=11%  Similarity=-0.007  Sum_probs=49.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhcC--CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~--~~d~vi~~a~   74 (229)
                      .+|||+|++|.+|..+++.+...|++|+++++++++.+.+... +... ..|.++.+   .+.++..  ++|+||+++|
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  244 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHTG  244 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCCE-EEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence            3799999999999999999999999999999976543322111 1111 23555432   3444432  6899999997

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.39  E-value=8.6e-05  Score=61.08  Aligned_cols=72  Identities=19%  Similarity=0.229  Sum_probs=49.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC---hhhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD---YRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+...+.-..+  |..+   .+.+.+...  ++|+||+++|.
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~--~~~~~~~~~~~~~~~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLI--NASKEDILRQVLKFTNGKGVDASFDSVGK  227 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE--eCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence            699999999999999999999999999999976543322111111222  3333   233444432  59999999873

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.39  E-value=0.00044  Score=59.28  Aligned_cols=87  Identities=8%  Similarity=0.169  Sum_probs=58.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-C---eEEEEEcCCCCCCCCCCCCCeEEEEccCC--Chhh-HHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-H---SVRALVRRTSDISGLPSEGALELVYGDVT--DYRS-LVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~-~~~~~~~~d~vi~~a   73 (229)
                      |||+|.| .|.||+.+++.++++. .   +|++++...... ++....++.+...+++  |.++ +.+++++.|+|||++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s   91 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS   91 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence            5899999 7999999999998864 4   688887765432 2111113456655654  4433 556777779999865


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcC
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (229)
                      -+.                ....++++|.+++
T Consensus        92 ~~~----------------~~l~Im~acleaG  107 (480)
T 2ph5_A           92 IGI----------------SSLALIILCNQKG  107 (480)
T ss_dssp             SSS----------------CHHHHHHHHHHHT
T ss_pred             ccc----------------cCHHHHHHHHHcC
Confidence            221                1356788888875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.39  E-value=0.00019  Score=59.87  Aligned_cols=71  Identities=17%  Similarity=0.069  Sum_probs=52.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-CCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|..+++.+...|++|+++++++++.+.+. .. +... ..|..+.+.+.++..++|+||+++|.
T Consensus       190 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-Ga~~-v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          190 HIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-GADS-FLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-CCSE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-CCce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence            6899995 99999999999999999999998876543221 11 1221 23566667777776789999999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.38  E-value=6.1e-05  Score=62.55  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=48.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhc-CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC-FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~vi~~a~~   75 (229)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+...+.-..+  |..+.   +.+.++. .++|++|+++|.
T Consensus       170 ~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~--~~~~~~~~~~~~~~~~~g~Dvvid~~g~  245 (353)
T 4dup_A          170 SVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGI--NYRSEDFAAVIKAETGQGVDIILDMIGA  245 (353)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE--eCCchHHHHHHHHHhCCCceEEEECCCH
Confidence            699999999999999999999999999999876543322111111222  33332   2233322 369999999873

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.37  E-value=3.4e-05  Score=62.19  Aligned_cols=70  Identities=21%  Similarity=0.280  Sum_probs=49.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC-----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|. +|++++|+.++.+.+...     ..+.+...+   .+++.+.+.++|+|||+.+.
T Consensus       129 ~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEEEECCCC
Confidence            6899997 8999999999999998 799999987654432110     112222223   34555666789999999764

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.35  E-value=0.00073  Score=59.59  Aligned_cols=67  Identities=24%  Similarity=0.217  Sum_probs=57.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+++|.|+ |-+|+.+++.|.+.|++|+++++++++.+.+.     ..+.+|.+|.+.++++ ++++|.+|-+.
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-----~~i~gD~t~~~~L~~agi~~ad~vi~~~  416 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-----VVVYGDATVGQTLRQAGIDRASGIIVTT  416 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-----CEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-----CEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence            57899996 99999999999999999999999998877653     6899999999999876 46799888664

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.35  E-value=6.7e-05  Score=61.51  Aligned_cols=72  Identities=19%  Similarity=0.296  Sum_probs=49.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+...+.-..+  |..+.   +.+.+...  ++|+||+++|.
T Consensus       143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          143 IILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETI--DYSHEDVAKRVLELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE--eCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence            699999999999999999999999999999876543322111111222  33332   33444433  59999999873

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.35  E-value=0.001  Score=53.81  Aligned_cols=52  Identities=23%  Similarity=0.299  Sum_probs=42.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|+||.|.+|.+++..|.+.|++|++.+|++.                     .+..++++++|+||-+.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~---------------------~~~~~~~~~aDvVilav   73 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW---------------------AVAESILANADVVIVSV   73 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG---------------------GGHHHHHTTCSEEEECS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc---------------------cCHHHHhcCCCEEEEeC
Confidence            37999999999999999999999999999988642                     13345567788888775

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.34  E-value=0.00014  Score=62.26  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=32.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      |||.|.| +|.+|..++..|++.|++|++++|++++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~   36 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            8999998 79999999999999999999999986543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.33  E-value=0.00082  Score=54.66  Aligned_cols=26  Identities=35%  Similarity=0.370  Sum_probs=23.6

Q ss_pred             ChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007           10 GYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus        10 G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |-.|.+++++++.+|++|+++.++..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            77999999999999999999998643

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.30  E-value=2.3e-05  Score=62.79  Aligned_cols=67  Identities=16%  Similarity=0.200  Sum_probs=46.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|+|+ |++|++++..|++.|++|++.+|+.++.+.+...    ..+.  ..|+   +++.+  .++|+||++++.
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~~~--~~~DivIn~t~~  190 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSIPL--QTYDLVINATSA  190 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGCCC--SCCSEEEECCCC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHhcc--CCCCEEEECCCC
Confidence            47999997 8899999999999999999999987554332210    0121  1222   22111  379999999875

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.29  E-value=3e-05  Score=67.90  Aligned_cols=68  Identities=22%  Similarity=0.187  Sum_probs=43.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHh-hcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~~   75 (229)
                      +++|||| |++|++++.+|++.|++|++++|+.++.+.+...-....+  ++.|   +.+ ....+|+||||++.
T Consensus       366 ~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~--~~~d---l~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          366 TVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL--SLTD---LDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE--ETTT---TTTC--CCSEEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee--eHHH---hhhccccCceEEEECCCC
Confidence            5899998 6999999999999999999999986543322110001111  1222   222 12358999999986

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.28  E-value=0.00018  Score=58.48  Aligned_cols=104  Identities=21%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCC------CCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |||.|+|+ |.+|..++..|+.+|.  +|++.+.+++ .....      ....++. .   +|   . +.++++|+||-+
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~-t---~d---~-~~l~~aD~Vi~a   84 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEI-S---KD---L-SASAHSKVVIFT   84 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEE-E---SC---G-GGGTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEE-e---CC---H-HHHCCCCEEEEc
Confidence            58999995 9999999999999998  9999999864 22110      0012322 1   22   2 457899999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ++...+. .+...++..|+.-...+++.+.++.+...++++|.
T Consensus        85 ag~~~pG-~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           85 VNSLGSS-QSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             CCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            9874222 23446788888888889988888764345555554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.27  E-value=4.3e-05  Score=64.18  Aligned_cols=73  Identities=16%  Similarity=0.134  Sum_probs=52.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|+|+|+ |.||+.+++.+...|++|++.+|++++.+.+....+.. +..+..+.+++.++++++|+||++++.
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEECCCc
Confidence            37999997 99999999999999999999999865432211100000 112334566787888889999998864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.25  E-value=0.00015  Score=60.05  Aligned_cols=72  Identities=14%  Similarity=0.141  Sum_probs=48.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +++|+||+|.+|...++.+...|.+|+++++++++.+.+...+.-..+  |..+.   +.+.++.  .++|++|+++|.
T Consensus       167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVL--NEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEE--ETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE--ECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence            589999999999999999999999999999877654332211111222  33332   2233332  269999999873

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.24  E-value=7.9e-05  Score=64.48  Aligned_cols=37  Identities=30%  Similarity=0.361  Sum_probs=33.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||.|.| .|.+|..++..|++.|++|+++++++++.+
T Consensus         9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~   45 (478)
T 2y0c_A            9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKID   45 (478)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            8999998 699999999999999999999999865433

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.21  E-value=8.1e-05  Score=60.41  Aligned_cols=72  Identities=21%  Similarity=0.243  Sum_probs=47.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEE--------EccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV--------YGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--------~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |||.|.|+ |.+|+.++..|.+.|++|++.+|++++.+.+... ++...        ..+.++.++..++++++|+||-+
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            79999995 9999999999999999999999976543322211 12211        11222333333344578988877


Q ss_pred             Cc
Q 027007           73 AA   74 (229)
Q Consensus        73 a~   74 (229)
                      ..
T Consensus        82 v~   83 (316)
T 2ew2_A           82 TK   83 (316)
T ss_dssp             SC
T ss_pred             ec
Confidence            53

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.21  E-value=0.00053  Score=54.79  Aligned_cols=71  Identities=21%  Similarity=0.204  Sum_probs=43.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE-EcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||.|+|++|.+|+.+++.+.+. ++++++. +|+.+...  +....-+..  . ++.-.+++.+++.++|+||.++.
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--~-gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--T-GVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--C-SCBCBCCHHHHHHHCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--C-CceecCCHHHHhcCCCEEEEcCC
Confidence            48999999999999999998875 5787764 66533211  110000000  0 22223445555567899998864

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.20  E-value=0.00012  Score=58.76  Aligned_cols=67  Identities=28%  Similarity=0.276  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+++|.| +|.+|++++..|.+.|++|++.+|+.++.+.+...-++.     +.+  ++.++++++|+||++.+.
T Consensus       130 ~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-----~~~--~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          130 KSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-----VVN--SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-----ECS--CGGGTGGGCSEEEECSST
T ss_pred             CEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-----eeh--hHHhhhcCCCEEEEeCCC
Confidence            5899999 589999999999999999999999865544333211222     111  334556789999999865

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.18  E-value=0.00058  Score=55.21  Aligned_cols=63  Identities=17%  Similarity=0.191  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|+| .|.+|..+++.|++.|++|++.+|++++.+.+... +++       -..+..++++ +|+||-+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~-------~~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GAT-------LADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCE-------ECSSHHHHTT-SSEEEECC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCE-------EcCCHHHHHh-CCEEEEEC
Confidence            4799998 79999999999999999999999998765543321 111       1224455566 89888775

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.15  E-value=0.00013  Score=58.66  Aligned_cols=64  Identities=16%  Similarity=0.210  Sum_probs=47.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |+.|++++..|.+.|. +|+++.|+.++.+.+..  .+..+     ..+++.+ + ++|+|||+.+.
T Consensus       124 ~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~--~~~~~-----~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          124 ICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG--EFKVI-----SYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             EEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT--TSEEE-----EHHHHTT-C-CCSEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--hcCcc-----cHHHHHh-c-cCCEEEECCcc
Confidence            6899996 8999999999999997 89999998766554443  22221     2344545 4 89999999754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00029  Score=57.74  Aligned_cols=71  Identities=23%  Similarity=0.248  Sum_probs=46.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh--hhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|...++.+...|++|+++++++++.+.+...+.-+.+  |..+.  +.+.++. .++|++|+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i--~~~~~~~~~~~~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDVMAERIRPLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE--ECC---------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEE--ecCCcHHHHHHHhcCCcccEEEECCc
Confidence            689999999999999999989999999999987654432221111222  33332  1222222 25899999986

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.13  E-value=0.00055  Score=57.17  Aligned_cols=70  Identities=14%  Similarity=0.063  Sum_probs=45.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh--cCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--CFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|.+|+++++. ++.+.+... +... ..|..+.+..+++  ..++|++|+++|
T Consensus       186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~~~~~~~~l-Ga~~-v~~~~~~~~~~~~~~~~g~D~vid~~g  257 (375)
T 2vn8_A          186 RVLILGASGGVGTFAIQVMKAWDAHVTAVCSQ-DASELVRKL-GADD-VIDYKSGSVEEQLKSLKPFDFILDNVG  257 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECG-GGHHHHHHT-TCSE-EEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCh-HHHHHHHHc-CCCE-EEECCchHHHHHHhhcCCCCEEEECCC
Confidence            69999999999999999998999999988843 332222111 1221 1244332222222  246999999987

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.13  E-value=0.00014  Score=60.06  Aligned_cols=71  Identities=15%  Similarity=0.125  Sum_probs=47.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|++|+++++++++.+.+...+.-..+  |..+  .+.+.++. .++|+||+++|
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVL--NHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEE--CTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE--ECCccHHHHHHHhCCCCccEEEECCC
Confidence            699999999999999999999999999999876543322111111222  2222  23344432 25899999986

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.13  E-value=0.00023  Score=61.48  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CC-eEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~-~V~~~~r~~~   35 (229)
                      |||.|.| .|.+|..++..|++. |+ +|++.+++++
T Consensus        19 mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           19 KKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            7899998 699999999999999 99 9999999987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.11  E-value=0.00013  Score=58.77  Aligned_cols=64  Identities=23%  Similarity=0.306  Sum_probs=44.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.| .|.+|+.+++.|++.|++|++.+|++++.+.+... ++.       -..+..++++++|+||-+.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~-------~~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-GAE-------RAATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCE-------ECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCe-------ecCCHHHHHhcCCEEEEEc
Confidence            7999998 69999999999999999999999987654433221 111       1123334445567777654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.07  E-value=0.0078  Score=47.24  Aligned_cols=72  Identities=25%  Similarity=0.296  Sum_probs=46.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~   74 (229)
                      |||.|+|++|.+|+.+++.+.+. ++++++.....+.++.+.. .... +..|.+.++...+.+.     +.++|+-+.|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            89999999999999999998865 8998877654332221110 0122 4557777776654332     4566664443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.04  E-value=0.00044  Score=55.15  Aligned_cols=64  Identities=20%  Similarity=0.180  Sum_probs=46.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      .+++|+|+ |++|++++..|++.|.+|++.+|+.++.+.+. .-++...  ++.+.       .++|+|||+.+.
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~l-------~~~DiVInaTp~  182 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPPK-------SAFDLIINATSA  182 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCCS-------SCCSEEEECCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHHh-------ccCCEEEEcccC
Confidence            37899995 99999999999999999999999987755443 1112222  22221       278999998754

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.03  E-value=0.00075  Score=57.78  Aligned_cols=72  Identities=18%  Similarity=0.287  Sum_probs=49.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEE-------------ccCCChhhHHhhcCCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-------------GDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~D~~~~~~~~~~~~~~d~   68 (229)
                      ++.|.| .|++|..++..|++.|++|++.+|++++.+.+... ...++.             ..+.-..+..++++++|+
T Consensus        10 ~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A           10 RIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            677888 69999999999999999999999998876554331 000000             011112244556678999


Q ss_pred             EEEeCcc
Q 027007           69 IFHTAAL   75 (229)
Q Consensus        69 vi~~a~~   75 (229)
                      ||-+.+.
T Consensus        88 vii~Vpt   94 (446)
T 4a7p_A           88 VFIAVGT   94 (446)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9988643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.02  E-value=7e-05  Score=58.00  Aligned_cols=65  Identities=11%  Similarity=0.167  Sum_probs=44.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|+| +|.+|.++++.|.+.|++|++ .+|++++.+.+....++....   .+.    +.++++|+||-+.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilav   89 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAV   89 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEES
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeC
Confidence            5899999 799999999999999999998 788766544322110111111   112    2346789998875

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.01  E-value=0.00018  Score=59.47  Aligned_cols=73  Identities=21%  Similarity=0.096  Sum_probs=47.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEc------cC-CChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG------DV-TDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------D~-~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.|+ |.+|+.++..|.+.|++|++++|++++.+.+.....+.+...      .+ ....+..++++++|+||-+.
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence            68999995 999999999999999999999997654332211111111100      11 01223445567899999886


Q ss_pred             c
Q 027007           74 A   74 (229)
Q Consensus        74 ~   74 (229)
                      .
T Consensus        84 ~   84 (359)
T 1bg6_A           84 P   84 (359)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.00  E-value=0.00033  Score=57.74  Aligned_cols=71  Identities=17%  Similarity=0.085  Sum_probs=48.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~d~vi~~a~   74 (229)
                      .+|||+|+ |.+|..+++.+...|++|+++++++++.+.+... +... ..|..+.   +.+.++..++|+||+++|
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSE-EECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC-CCCE-EecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            37999999 7799999999999999999999876543322111 1221 2355432   233333357999999986

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.99  E-value=0.0057  Score=48.21  Aligned_cols=70  Identities=21%  Similarity=0.239  Sum_probs=46.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCC------------------------CCC--eEEEEccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS------------------------EGA--LELVYGDVT   54 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~------------------------~~~--~~~~~~D~~   54 (229)
                      +|+|.|+ |++|+++++.|+..|. ++++++++.-....+..                        ++.  ++.+..+++
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~  108 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLT  108 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            7999995 7899999999999995 78888775321111110                        112  334444443


Q ss_pred             ChhhHHhhcCCccEEEEeC
Q 027007           55 DYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a   73 (229)
                       .+.+.++++++|+||.+.
T Consensus       109 -~~~~~~~~~~~DvVi~~~  126 (251)
T 1zud_1          109 -GEALKDAVARADVVLDCT  126 (251)
T ss_dssp             -HHHHHHHHHHCSEEEECC
T ss_pred             -HHHHHHHHhcCCEEEECC
Confidence             456677778899999874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.97  E-value=0.0002  Score=61.32  Aligned_cols=36  Identities=28%  Similarity=0.273  Sum_probs=32.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      +|||+|++|.||...++.+...|.+|+++++++++.
T Consensus       223 ~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          223 IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            699999999999999999999999999999876543

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.97  E-value=0.00019  Score=58.90  Aligned_cols=73  Identities=19%  Similarity=0.236  Sum_probs=47.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc--CCCCCCCCCCCC-----CeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR--RTSDISGLPSEG-----ALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r--~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.|+ |.+|+.++..|.+.|++|++++|  ++++.+.+....     +........+++++..++++++|+||-+.
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            89999994 99999999999999999999999  654332221110     11000001223335556677899999876


Q ss_pred             c
Q 027007           74 A   74 (229)
Q Consensus        74 ~   74 (229)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.97  E-value=0.0012  Score=51.79  Aligned_cols=33  Identities=27%  Similarity=0.477  Sum_probs=27.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~-~~r~~   34 (229)
                      |||.|+|+ |.+|+.+++.+.+++.+++. ++|+.
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             eEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            58999999 99999999999988777666 45543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.94  E-value=0.00033  Score=60.17  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=32.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      +|||+|++|.+|...++.+...|.+|+++++++++.
T Consensus       231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~  266 (456)
T 3krt_A          231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA  266 (456)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            699999999999999999999999999999876543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.93  E-value=0.00023  Score=58.01  Aligned_cols=38  Identities=29%  Similarity=0.396  Sum_probs=33.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (229)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.+.
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~   59 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDE   59 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            6899998 6999999999999999999999998765443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.93  E-value=0.00062  Score=56.48  Aligned_cols=72  Identities=13%  Similarity=0.072  Sum_probs=50.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+...-+... ..|..+.+.+.++..++|+||.++|.
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD-YVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC-EEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce-eeccccHHHHHHhcCCCCEEEECCCC
Confidence            6899985 999999999888889999999998765432210101111 12444556666666679999999873

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.92  E-value=0.00044  Score=57.44  Aligned_cols=71  Identities=14%  Similarity=0.026  Sum_probs=48.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|...++.+...|++|+++++++++.+.+...+.-+.+  |..+. +...++..++|+||.+++.
T Consensus       182 ~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI--ATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE--EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEE--cCcCchHHHHHhhcCCCEEEECCCC
Confidence            7999999 9999999998888999999999987664432211111222  33333 2233333579999999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.91  E-value=0.00024  Score=58.20  Aligned_cols=64  Identities=16%  Similarity=0.189  Sum_probs=45.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|+| .|.+|+.+++.|++.|++|++.+|++++.+.+... +++       -..+..++++++|+||-+.
T Consensus        32 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~-------~~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           32 RKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GAT-------IHEQARAAARDADIVVSML   95 (320)
T ss_dssp             SEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCE-------EESSHHHHHTTCSEEEECC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCE-------eeCCHHHHHhcCCEEEEEC
Confidence            6899997 69999999999999999999999987654433221 111       1223445566778877665

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.90  E-value=0.0023  Score=48.97  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|.|.| +|.+|++++..|.+.|++|++.+|++
T Consensus        20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            6899999 79999999999999999999998874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.89  E-value=0.00038  Score=57.44  Aligned_cols=70  Identities=19%  Similarity=0.246  Sum_probs=46.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|..+++.+...|++|+++ +++++.+.+... +...+. +-.+. +.+.+..  .++|++|+++|
T Consensus       153 ~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l-Ga~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          153 TVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL-GATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH-TSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc-CCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            69999999999999999999999999998 654443322111 223332 22222 2233333  26999999986

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.89  E-value=0.00054  Score=56.62  Aligned_cols=66  Identities=23%  Similarity=0.237  Sum_probs=47.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+...+.-..+    .+.+.+.+   ++|+||+++|.
T Consensus       179 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~----~~~~~~~~---~~D~vid~~g~  244 (348)
T 3two_A          179 KVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY----TDPKQCKE---ELDFIISTIPT  244 (348)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE----SSGGGCCS---CEEEEEECCCS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec----CCHHHHhc---CCCEEEECCCc
Confidence            7999996 9999999999888999999999887765433222111223    34444332   89999999873

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.89  E-value=0.00039  Score=57.66  Aligned_cols=32  Identities=41%  Similarity=0.625  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC------CeEEEEEc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG------HSVRALVR   32 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g------~~V~~~~r   32 (229)
                      |||.|.||||.+|+.+++.|.+++      .+++.+.+
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s   47 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA   47 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence            489999999999999999999887      37777764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.88  E-value=0.00019  Score=59.76  Aligned_cols=69  Identities=22%  Similarity=0.271  Sum_probs=47.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC---CCCCCCCCCCCeEEEEccCCC--hhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---SDISGLPSEGALELVYGDVTD--YRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|..+++.+...|++|+++++++   ++.+.+.. -+...+  | .+  .+.+.+.-.++|+||+++|.
T Consensus       183 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          183 KVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-TKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             EEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-HTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-hCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence            6999999 9999999999999999999999986   44322111 123333  4 43  22333212469999999873

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.87  E-value=0.00069  Score=56.54  Aligned_cols=71  Identities=17%  Similarity=0.099  Sum_probs=49.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+... +... ..|..+.+.+.++..++|+||.++|.
T Consensus       197 ~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l-Ga~~-vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          197 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL-GADE-VVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcE-EeccccHHHHHHhhcCCCEEEECCCC
Confidence            6899997 8899999998888999999999887654322111 1111 13455555455555679999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.86  E-value=0.011  Score=47.51  Aligned_cols=71  Identities=10%  Similarity=0.168  Sum_probs=47.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC-------------------------CCCCCeEEEEccCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL-------------------------PSEGALELVYGDVTD   55 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~-------------------------~~~~~~~~~~~D~~~   55 (229)
                      +|+|.| .|++|+++++.|+..| -+++++|++.=....+                         .+.-.++.+..++++
T Consensus        38 ~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            799998 5999999999999999 5788888764111111                         111234556667776


Q ss_pred             hhhHHhhc-----------CCccEEEEeC
Q 027007           56 YRSLVDAC-----------FGCHVIFHTA   73 (229)
Q Consensus        56 ~~~~~~~~-----------~~~d~vi~~a   73 (229)
                      .+.+.+++           +++|+||.+.
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            55555543           5789999774

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.86  E-value=0.00016  Score=57.21  Aligned_cols=66  Identities=15%  Similarity=0.090  Sum_probs=45.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| +|.+|+.+++.|.+.|++|.+.+|++++.+.+....+       +....+..++++++|+||-+..
T Consensus         4 m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            4 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA-------LPYAMSHQDLIDQVDLVILGIK   69 (259)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT-------CCBCSSHHHHHHTCSEEEECSC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcC-------CEeeCCHHHHHhcCCEEEEEeC
Confidence            7899999 7999999999999999999999987654332211001       1112234445568899888764

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.85  E-value=0.00022  Score=56.06  Aligned_cols=35  Identities=37%  Similarity=0.503  Sum_probs=31.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |+|.|+| +|.+|.++++.|++.|++|++.+|++++
T Consensus        20 ~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           20 MKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            6899997 8999999999999999999999998654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.83  E-value=0.0002  Score=58.09  Aligned_cols=35  Identities=17%  Similarity=0.220  Sum_probs=31.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      |||.|+| .|.+|+.+++.|++.|++|++.+|++++
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            6899997 7999999999999999999999998653

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.82  E-value=0.00016  Score=58.38  Aligned_cols=65  Identities=25%  Similarity=0.318  Sum_probs=44.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|.| +|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..    ..+   ..++++++|+||-+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~---~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET----AST---AKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCee----cCC---HHHHHhCCCEEEEECC
Confidence            6899999 79999999999999999999999876543322111 1111    112   3334456788877754

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.82  E-value=0.001  Score=55.34  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=46.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.+.+... ++.    ...+.+++.+-.+.+|+||-+..
T Consensus        23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~----~~~s~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIA----GARSIEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCB----CCSSHHHHHHHSCSSCEEEECSC
T ss_pred             CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCE----EeCCHHHHHhcCCCCCEEEEeCC
Confidence            6899998 79999999999999999999999987654332221 111    12344454444445588887753

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.81  E-value=0.0038  Score=52.12  Aligned_cols=66  Identities=24%  Similarity=0.241  Sum_probs=51.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      ++|+|.| +|.+|+.+++.+.+.|++|++++.++.... ..    .-.++..|..|.+.+.++.+++|+|..
T Consensus        13 ~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~----ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           13 ATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV----AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG----SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh----CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            3799999 488999999999999999999987654211 11    124677899999999998888998754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.80  E-value=0.0022  Score=52.38  Aligned_cols=63  Identities=19%  Similarity=0.290  Sum_probs=48.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |++.|.| .|.||+++++.|...|++|++.+|++...+.      +....    ..+++.++++++|+|+.+..
T Consensus       140 ~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~~~~----~~~~l~ell~~aDiV~l~~P  202 (315)
T 3pp8_A          140 FSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWPG------VESYV----GREELRAFLNQTRVLINLLP  202 (315)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCTT------CEEEE----SHHHHHHHHHTCSEEEECCC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhhh------hhhhc----ccCCHHHHHhhCCEEEEecC
Confidence            5788998 6999999999999999999999998654322      11111    23678888999999987764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.79  E-value=0.0003  Score=56.25  Aligned_cols=66  Identities=17%  Similarity=0.223  Sum_probs=45.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC---CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|. +|++.+|+.++.+.+...   ..+..+  ++   +++..  .++|+|||+.+.
T Consensus       122 ~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~---~~l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          122 RVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RY---EALEG--QSFDIVVNATSA  191 (272)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CS---GGGTT--CCCSEEEECSSG
T ss_pred             EEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eH---HHhcc--cCCCEEEECCCC
Confidence            6899996 8999999999999995 999999987654332110   123322  22   22222  678999999754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.78  E-value=0.00024  Score=60.12  Aligned_cols=69  Identities=25%  Similarity=0.326  Sum_probs=49.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|+|+|+ |.+|+.+++.|...|. +|++++|+.++.+.+...-+..     ..+.+++.+++.++|+||.+.+.
T Consensus       168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-----AVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-----ECCGGGHHHHHHTCSEEEECCSS
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-----eecHHhHHHHhcCCCEEEEccCC
Confidence            47999996 9999999999999998 8999999865432221100112     12334566667889999999753

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.78  E-value=0.00081  Score=54.06  Aligned_cols=63  Identities=19%  Similarity=0.222  Sum_probs=44.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|+| +|.+|+.+++.|.+.|++|++.+ ++++.+.+... +       +....+..++++++|+||-+.
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~-g-------~~~~~~~~~~~~~~D~vi~~v   66 (295)
T 1yb4_A            4 MKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSL-G-------AVNVETARQVTEFADIIFIMV   66 (295)
T ss_dssp             CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTT-T-------CBCCSSHHHHHHTCSEEEECC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHc-C-------CcccCCHHHHHhcCCEEEEEC
Confidence            6899998 69999999999999999999888 66554433221 1       111223444456778888776

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.78  E-value=0.0017  Score=53.00  Aligned_cols=67  Identities=18%  Similarity=0.355  Sum_probs=45.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHh-hcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~   74 (229)
                      |||.|+| .|.+|..+++.|.+.|+  +|++.+|++++.+.....+......      .+..+ +++++|+||-+..
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~------~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT------TSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE------SCTTGGGGGCCSEEEECSC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc------CCHHHHhhccCCEEEEeCC
Confidence            5899999 79999999999999999  9999999865433211111110111      12234 5678999998763

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.77  E-value=0.00037  Score=56.48  Aligned_cols=68  Identities=15%  Similarity=0.199  Sum_probs=49.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++++|.|. |.+|+++++.|...|++|++.+|+.++.+.+.. .+++.+     +.+++.++++++|+|+.+...
T Consensus       158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~-----~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPF-----HTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence            47999994 999999999999999999999997643221111 022222     234677788899999988753

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.76  E-value=0.0038  Score=51.48  Aligned_cols=60  Identities=28%  Similarity=0.171  Sum_probs=45.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |++.|.| .|.||+++++.|...|++|++.+|++.+..      ...       ...++.++++++|+|+.+..
T Consensus       172 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~-------~~~sl~ell~~aDvVil~vP  231 (340)
T 4dgs_A          172 KRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSGV------DWI-------AHQSPVDLARDSDVLAVCVA  231 (340)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTTS------CCE-------ECSSHHHHHHTCSEEEECC-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCccccc------Cce-------ecCCHHHHHhcCCEEEEeCC
Confidence            5788998 699999999999999999999998764311      111       12356677889999997764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.76  E-value=0.00021  Score=58.54  Aligned_cols=71  Identities=25%  Similarity=0.265  Sum_probs=45.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh--hhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|||+|++|.+|...++.+...|++|+++++++++.+.+...+.-+.+  |..+.  +.+.++. .++|++|+++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~~~~~~~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI--SREDVYDGTLKALSKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE--EHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE--ECCCchHHHHHHhhcCCccEEEECCc
Confidence            699999999999999999888999999999987654332111111122  22111  1111111 25899999986

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=96.75  E-value=0.0047  Score=50.57  Aligned_cols=64  Identities=20%  Similarity=0.298  Sum_probs=48.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++.|.| .|-||+++++.|...|++|++.+|++.......     .     .....++.++++++|+|+.+...
T Consensus       141 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~-----~~~~~~l~ell~~aDvV~l~lPl  204 (324)
T 3hg7_A          141 RTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD-----Q-----VYQLPALNKMLAQADVIVSVLPA  204 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS-----E-----EECGGGHHHHHHTCSEEEECCCC
T ss_pred             ceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh-----c-----ccccCCHHHHHhhCCEEEEeCCC
Confidence            4788998 799999999999999999999998764332211     1     11355778888999999987653

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.00096  Score=55.17  Aligned_cols=70  Identities=21%  Similarity=0.121  Sum_probs=46.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC----hhhHHhhc-----CCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD----YRSLVDAC-----FGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~-----~~~d~vi~~   72 (229)
                      +|||+|+ |.+|...++.+...|++|+++++++++.+.+...+.-..+  |..+    .+.+.+..     .++|+||++
T Consensus       171 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~--~~~~~~~~~~~i~~~~~~~~g~g~D~vid~  247 (352)
T 1e3j_A          171 TVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTL--VVDPAKEEESSIIERIRSAIGDLPNVTIDC  247 (352)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE--ECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEE--cCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence            6999996 9999999998888999999998876543322111111222  3332    34455443     369999999


Q ss_pred             Cc
Q 027007           73 AA   74 (229)
Q Consensus        73 a~   74 (229)
                      +|
T Consensus       248 ~g  249 (352)
T 1e3j_A          248 SG  249 (352)
T ss_dssp             SC
T ss_pred             CC
Confidence            86

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.74  E-value=0.0012  Score=55.38  Aligned_cols=71  Identities=18%  Similarity=0.152  Sum_probs=48.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCC----------------------ChhhH
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT----------------------DYRSL   59 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~----------------------~~~~~   59 (229)
                      +|+|+| +|.+|..+++.+...|.+|++.+|++.+.+.... -+.+++..|..                      +.+.+
T Consensus       174 ~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l  251 (384)
T 1l7d_A          174 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV  251 (384)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence            789999 5999999999999999999999998765332111 12222211111                      12336


Q ss_pred             HhhcCCccEEEEeCc
Q 027007           60 VDACFGCHVIFHTAA   74 (229)
Q Consensus        60 ~~~~~~~d~vi~~a~   74 (229)
                      .+.++++|+||+++.
T Consensus       252 ~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          252 LKELVKTDIAITTAL  266 (384)
T ss_dssp             HHHHTTCSEEEECCC
T ss_pred             HHHhCCCCEEEECCc
Confidence            777889999998873

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.74  E-value=0.00082  Score=53.96  Aligned_cols=34  Identities=26%  Similarity=0.386  Sum_probs=30.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      ||.|.| +|.+|+.+++.|++.|++|++.+|++++
T Consensus         6 kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A            6 NVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            789998 5999999999999999999999998654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.73  E-value=0.00022  Score=57.42  Aligned_cols=38  Identities=21%  Similarity=0.360  Sum_probs=33.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (229)
                      |||.|.| .|.+|+.+++.|++.|++|++.+|++++.+.
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~   39 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAP   39 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHH
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            4799998 7999999999999999999999998765443

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.71  E-value=0.0016  Score=53.58  Aligned_cols=69  Identities=14%  Similarity=0.131  Sum_probs=46.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhh-cCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDA-CFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~-~~~~d~vi~~a~   74 (229)
                      +|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+... .-..  .|..+.   +.+.++ -.++|+||+++|
T Consensus       167 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v--~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (343)
T 2dq4_A          167 SVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRL--VNPLEEDLLEVVRRVTGSGVEVLLEFSG  240 (343)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEE--ECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhc--cCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence            6899999 9999999999888998 999999876543332221 1112  243332   223222 236899999986

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.70  E-value=0.00051  Score=57.41  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccC------------------CChhhHHhhc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV------------------TDYRSLVDAC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~------------------~~~~~~~~~~   63 (229)
                      +|+|+|+ |-+|...++.+...|.+|++.+|++.+.+.+... +.+++..|+                  .+.+++.+++
T Consensus       186 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l  263 (381)
T 3p2y_A          186 SALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI  263 (381)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence            7999996 9999999999999999999999987653332211 233332221                  1245677888


Q ss_pred             CCccEEEEeCcc
Q 027007           64 FGCHVIFHTAAL   75 (229)
Q Consensus        64 ~~~d~vi~~a~~   75 (229)
                      +++|+||.++..
T Consensus       264 ~~aDIVI~tv~i  275 (381)
T 3p2y_A          264 TKFDIVITTALV  275 (381)
T ss_dssp             TTCSEEEECCCC
T ss_pred             hcCCEEEECCCC
Confidence            999999988754

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.68  E-value=0.00054  Score=59.31  Aligned_cols=38  Identities=26%  Similarity=0.539  Sum_probs=32.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISG   39 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~   39 (229)
                      |||.|.| .|.+|..++..|++.  |++|++++|++++.+.
T Consensus        10 mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~   49 (481)
T 2o3j_A           10 SKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAE   49 (481)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH
Confidence            6899998 699999999999998  7999999998665443

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.67  E-value=0.0068  Score=50.49  Aligned_cols=67  Identities=22%  Similarity=0.179  Sum_probs=51.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      +||+|+|+ |.+|+.+++.+.+.|++|++++.++.... .+.    -..+..|..|.+.+.+++.++|.|+..
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA----DEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS----SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC----ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            26999996 78999999999999999999987643311 111    135678999999998888889988754

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.66  E-value=0.0023  Score=51.75  Aligned_cols=40  Identities=30%  Similarity=0.381  Sum_probs=29.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS   42 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~   42 (229)
                      ||-++| -|.+|+.+++.|+++||+|++.+|++++.+.+..
T Consensus         7 kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   46 (297)
T 4gbj_A            7 KIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK   46 (297)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT
T ss_pred             cEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            688888 7999999999999999999999999888776654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.66  E-value=0.00058  Score=55.75  Aligned_cols=70  Identities=11%  Similarity=0.104  Sum_probs=48.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|.+|++++++.. .+.+... +... ..|..+.+.+.+.++++|++|.+.|
T Consensus       155 ~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~l-Ga~~-~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          155 VVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKAL-GAEQ-CINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHH-TCSE-EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHc-CCCE-EEeCCCcchhhhhccCCCEEEECCC
Confidence            7999999999999999999999999998876432 1111110 1111 2244444436666688999999986

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.66  E-value=0.00058  Score=54.87  Aligned_cols=65  Identities=22%  Similarity=0.251  Sum_probs=44.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|+|+ |++|++++..|++.|. +|++.+|+.++.+.+...    ..+....     .++   +..++|+|||+.+.
T Consensus       128 ~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~-----~~~---l~~~aDiIInaTp~  197 (281)
T 3o8q_A          128 TILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA-----FEQ---LKQSYDVIINSTSA  197 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE-----GGG---CCSCEEEEEECSCC
T ss_pred             EEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee-----HHH---hcCCCCEEEEcCcC
Confidence            7899996 8999999999999995 999999987554332110    1123222     112   22679999998754

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.64  E-value=0.00035  Score=56.28  Aligned_cols=37  Identities=19%  Similarity=0.260  Sum_probs=32.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |+|.|.| .|.+|+++++.|.+.|++|++.+|++++.+
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~   37 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACK   37 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHH
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            8999998 699999999999999999999999875433

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.63  E-value=0.00017  Score=57.22  Aligned_cols=65  Identities=22%  Similarity=0.277  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|.|+ |.+|+.+++.|.+.|++ |.+.+|++++.+.+....++..       ..+..++++++|+||-+.
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~Dvvi~av   76 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-------TTDLAEVNPYAKLYIVSL   76 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-------ESCGGGSCSCCSEEEECC
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-------eCCHHHHhcCCCEEEEec
Confidence            68999995 99999999999999998 8888887654332211101221       112334567889998775

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.63  E-value=0.0042  Score=51.31  Aligned_cols=34  Identities=29%  Similarity=0.513  Sum_probs=28.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~   34 (229)
                      |||.|.|++|.+|+.+++.|.++. .+++.+.+..
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~   39 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR   39 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch
Confidence            379999999999999999998776 4877776643

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.62  E-value=0.00035  Score=56.42  Aligned_cols=64  Identities=20%  Similarity=0.319  Sum_probs=44.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|.| .|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..    ..+   ..++++++|+||-+.
T Consensus         5 ~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~---~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-GAQA----CEN---NQKVAAASDIIFTSL   68 (301)
T ss_dssp             CEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-TCEE----CSS---HHHHHHHCSEEEECC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCee----cCC---HHHHHhCCCEEEEEC
Confidence            6899998 69999999999999999999999876543332221 2221    112   333445678888775

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.61  E-value=0.00058  Score=55.17  Aligned_cols=67  Identities=15%  Similarity=0.194  Sum_probs=48.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ++++|.| .|.+|+++++.|...|++|++.+|+.++.+.+.. .+++.+     +.+++.++++++|+|+.+..
T Consensus       156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~-----~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF-----HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence            4799999 6999999999999999999999997643221111 122222     23567777889999998874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.60  E-value=0.0012  Score=55.57  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=51.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEcc----------------CCC------hhhH
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD----------------VTD------YRSL   59 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D----------------~~~------~~~~   59 (229)
                      ||+|+|+ |-+|...++.+...|++|++.++++.+.+.+... +.+++..+                +++      .+.+
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l  269 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV  269 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence            7999996 9999999999999999999999987643322111 22222221                223      2477


Q ss_pred             HhhcCCccEEEEeCcc
Q 027007           60 VDACFGCHVIFHTAAL   75 (229)
Q Consensus        60 ~~~~~~~d~vi~~a~~   75 (229)
                      .++++++|+||.++..
T Consensus       270 ~e~l~~aDVVI~tvli  285 (405)
T 4dio_A          270 AEHIAKQDIVITTALI  285 (405)
T ss_dssp             HHHHHTCSEEEECCCC
T ss_pred             HHHhcCCCEEEECCcC
Confidence            8888999999998754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.60  E-value=0.0049  Score=50.24  Aligned_cols=73  Identities=15%  Similarity=0.081  Sum_probs=51.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC----CCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----DISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|++.-+|+.+++.|++.|.+|++++|+..    +.+.+... .........++.+++.+.+.++|+||.+.+.
T Consensus       179 ~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~-~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~  255 (320)
T 1edz_A          179 KCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN-KHHVEDLGEYSEDLLKKCSLDSDVVITGVPS  255 (320)
T ss_dssp             EEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC-CCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             EEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh-cccccccccccHhHHHHHhccCCEEEECCCC
Confidence            7899998888999999999999999999988732    22222211 0111111113457888889999999988875

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.58  E-value=0.0047  Score=49.41  Aligned_cols=52  Identities=23%  Similarity=0.284  Sum_probs=44.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.|.++.+|+.++..|+++|..|+++.+..                      .++.+.++++|+||.+.+.
T Consensus       162 ~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------~~L~~~~~~ADIVI~Avg~  213 (285)
T 3p2o_A          162 DAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------KDLSLYTRQADLIIVAAGC  213 (285)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHTTCSEEEECSSC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHhhcCCEEEECCCC
Confidence            789999999999999999999999999887642                      2355667899999999874

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.58  E-value=0.00074  Score=59.55  Aligned_cols=70  Identities=20%  Similarity=0.244  Sum_probs=56.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~   71 (229)
                      ++++|+|. |-+|+.++++|.+.|++|++++.++++.+.+....++.++.+|.++++.++++ ++++|.||-
T Consensus       128 ~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~  198 (565)
T 4gx0_A          128 GHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA  198 (565)
T ss_dssp             SCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             CeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence            47899995 88999999999999999999999876544332222578999999999999886 457888874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.56  E-value=0.0021  Score=52.82  Aligned_cols=65  Identities=15%  Similarity=0.114  Sum_probs=45.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|.|.| .|.||+.+++.|...|++|++.+|+.++.+.... .++..     .   ++.++++++|+|+-+...
T Consensus       156 ~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~-----~---~l~e~l~~aDvVi~~vp~  220 (330)
T 2gcg_A          156 STVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQAEF-----V---STPELAAQSDFIVVACSL  220 (330)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TTCEE-----C---CHHHHHHHCSEEEECCCC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh-cCcee-----C---CHHHHHhhCCEEEEeCCC
Confidence            5899998 5999999999999999999999987653321111 11211     1   344556788999987643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.56  E-value=0.00071  Score=55.87  Aligned_cols=70  Identities=16%  Similarity=0.100  Sum_probs=46.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhcC--CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d~vi~~a~   74 (229)
                      +|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+... +... ..|..+.   +.+.++..  ++|+||++++
T Consensus       170 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~vid~~g  245 (348)
T 2d8a_A          170 SVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GADY-VINPFEEDVVKEVMDITDGNGVDVFLEFSG  245 (348)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCSE-EECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCCE-EECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence            6999999 9999999999999998 999999876543322111 1111 1243332   23333332  5899999986

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.56  E-value=0.00042  Score=59.02  Aligned_cols=72  Identities=21%  Similarity=0.221  Sum_probs=46.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCC------CeE-EE---EccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG------ALE-LV---YGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~-~~---~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|.| +|.+|..++..|++ |++|++.++++++.+.+....      .+. .+   ...+.-..+..++++++|+||
T Consensus        37 mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi  114 (432)
T 3pid_A           37 MKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVI  114 (432)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence            7899998 69999999999887 999999999876544322210      000 00   001111223445667899998


Q ss_pred             EeCc
Q 027007           71 HTAA   74 (229)
Q Consensus        71 ~~a~   74 (229)
                      -+..
T Consensus       115 iaVP  118 (432)
T 3pid_A          115 IATP  118 (432)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            7753

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.54  E-value=0.0021  Score=55.41  Aligned_cols=37  Identities=30%  Similarity=0.487  Sum_probs=32.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~   38 (229)
                      |||.|+| .|.+|..++..|++.  |++|++.+|++++.+
T Consensus         6 mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~   44 (467)
T 2q3e_A            6 KKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRIN   44 (467)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHH
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence            6899998 699999999999998  899999999865443

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.53  E-value=0.0037  Score=51.21  Aligned_cols=63  Identities=19%  Similarity=0.256  Sum_probs=47.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +++.|.| .|.||+++++.|...|++|++.+|+....+...     ..+.     .+++.++++++|+|+.+..
T Consensus       138 ktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~~~-----~~~l~ell~~aDvV~l~lP  200 (324)
T 3evt_A          138 QQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHFH-----ETVA-----FTATADALATANFIVNALP  200 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS-----EEEE-----GGGCHHHHHHCSEEEECCC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh-----hccc-----cCCHHHHHhhCCEEEEcCC
Confidence            4788998 699999999999999999999999865433221     1111     3456677788999987764

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.52  E-value=0.0015  Score=54.67  Aligned_cols=70  Identities=16%  Similarity=0.203  Sum_probs=46.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCC--Chhh----HHhhcC--CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVT--DYRS----LVDACF--GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~----~~~~~~--~~d~vi~~   72 (229)
                      +|||+| +|.+|...++.+...| .+|+++++++++.+.+...+.-..+  |..  +.++    +.++..  ++|+||++
T Consensus       198 ~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi--~~~~~~~~~~~~~v~~~~~g~g~Dvvid~  274 (380)
T 1vj0_A          198 TVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL--NRRETSVEERRKAIMDITHGRGADFILEA  274 (380)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred             EEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEE--eccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence            699999 8999999999888899 6999999876543322211111222  332  1223    333332  58999999


Q ss_pred             Cc
Q 027007           73 AA   74 (229)
Q Consensus        73 a~   74 (229)
                      +|
T Consensus       275 ~g  276 (380)
T 1vj0_A          275 TG  276 (380)
T ss_dssp             SS
T ss_pred             CC
Confidence            87

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.52  E-value=0.00027  Score=57.52  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=43.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |+|.|+| .|.+|+.+++.|++.|++|++.+|++++.+.+... ++.       ...+..++++++|+||-+.
T Consensus        10 ~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~-------~~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A           10 FDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GAH-------LCESVKAALSASPATIFVL   73 (306)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TCE-------ECSSHHHHHHHSSEEEECC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCe-------ecCCHHHHHhcCCEEEEEe
Confidence            5789997 79999999999999999999999987543332111 111       1123344455677777664

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.51  E-value=0.00047  Score=58.31  Aligned_cols=36  Identities=33%  Similarity=0.397  Sum_probs=31.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||.|.|. |.+|..++..|++ |++|++++|++++.+
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~~~~~   36 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILPSKVD   36 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCHHHHH
Confidence            89999985 9999999999998 999999999865433

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.48  E-value=0.0044  Score=49.92  Aligned_cols=61  Identities=21%  Similarity=0.169  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |+|.|.| .|.||+++++.|...|++|++.+|+....+.             ....+++.++++++|+|+.+...
T Consensus       123 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~~~~~l~ell~~aDiV~l~~P~  183 (290)
T 3gvx_A          123 KALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-------------DVISESPADLFRQSDFVLIAIPL  183 (290)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-------------SEECSSHHHHHHHCSEEEECCCC
T ss_pred             chheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc-------------ccccCChHHHhhccCeEEEEeec
Confidence            5788998 6999999999999999999999998654321             11123566677889999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	229
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-28
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-27
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-24
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-23
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-22
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-21
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-20
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-19
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-18
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-16
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-16
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	9e-16
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-15
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-15
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-14
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-13
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-12
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-12
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-12
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-11
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-10
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	7e-10
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	3e-08
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	4e-08
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-07
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-07
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	6e-06
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-06
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-05
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-05
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-05
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	9e-05
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-04
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-04
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-04
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-04
d1vm6a3	128	c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate red	3e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-04
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-04
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	6e-04
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	7e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	9e-04
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.001
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.002
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.002
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	0.003
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.003
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	0.003
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	0.004
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.004
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.004

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  107 bits (267), Expect = 4e-28
 Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 26/201 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           MKIL++G +G++G  +   ++K        + + +       +S +         + D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKET------ 104
           D   +      +    + H AA   V+  +  P+ F   N+ G   +++ A++       
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 105 --KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ 155
             K   +  + S+    G        EN V    +  T        Y  SKA +D +   
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 156 -AASEGLPIVPVYPGVIYGPG 175
              + GLP +       YGP 
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPY 201

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 3e-27
 Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPSEGALELVYGDVTDYR 57
           +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV +  
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-- 60

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                      I+H A+      ++ +P +    N  G  N++  AK      +++  S+
Sbjct: 61  ---PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAST 115

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIY 172
               G  + +   E+          +  Y+  K VA+ +       EG+ +        +
Sbjct: 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175

Query: 173 GPG 175
           GP 
Sbjct: 176 GPR 178

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 96.0 bits (238), Expect = 5e-24
 Identities = 33/191 (17%), Positives = 58/191 (30%), Gaps = 20/191 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYG 51
             L++G +G  G  L   LL++G+ V  + RR S  +                   L YG
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 52  DVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--K 105
           D++D  +L                  + V      P     V+  G   +++A +    +
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
              +    S+    G        E      +   + Y  +K  A  I +    S G+   
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPR---SPYAVAKLYAYWITVNYRESYGMYAC 179

Query: 165 PVYPGVIYGPG 175
                    P 
Sbjct: 180 NGILFNHESPR 190

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 94.5 bits (234), Expect = 1e-23
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 18/189 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-----------RTSDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H A  + V+  +   S F   NV+G + ++Q A +    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPV 166
            ++++ S+    GS D     E+   E     + Y  SKA +D +A     + GL +   
Sbjct: 120 GRVVHVSTNQVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 167 YPGVIYGPG 175
                YGP 
Sbjct: 177 RCCNNYGPY 185

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 91.1 bits (225), Expect = 2e-22
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 24/182 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++ ++G  G +G  +   L ++G     L  R                  ++ D R++ D
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHD 48

Query: 62  --ACFGCHVIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      ++  AA V         P+ F   N+    N++ AA +   V K+++  S 
Sbjct: 49  FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSS 107

Query: 117 FALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQAASE-GLPIVPVYPGVIYG 173
                       E+++ +     T   Y  +K    K+      + G     V P  +YG
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 174 PG 175
           P 
Sbjct: 168 PH 169

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 7e-21
 Identities = 39/193 (20%), Positives = 63/193 (32%), Gaps = 22/193 (11%)

Query: 2   KI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELV 49
            + L++G +G  G  L   LL++G+ V  +VRR+S  +               EG ++L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 50  YGDVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           YGD+TD   LV                 + V+           V+  G   ++ A K   
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121

Query: 106 --TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLP 162
                K    S+    G        E      +   + Y  +K  A  I +    +  L 
Sbjct: 122 LINSVKFYQASTSELYGKVQEIPQKETTPFYPR---SPYGAAKLYAYWIVVNFREAYNLF 178

Query: 163 IVPVYPGVIYGPG 175
            V         P 
Sbjct: 179 AVNGILFNHESPR 191

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 86.2 bits (212), Expect = 2e-20
 Identities = 38/184 (20%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L    +       +           V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           +   + +         + H A L  V   +  P  ++  NV G   ++ A +    V+  
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNF 119

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I++SS    G        E+             +         LQ A     I  +    
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 171 IYGP 174
             G 
Sbjct: 180 PVGA 183

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 81.6 bits (200), Expect = 7e-19
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 18/215 (8%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-------RTSDISGLPSEGALELVYGDV 53
             I+V+G +G++G    H +      V   V          +++  +  +  +ELV GD+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDR-VELVVGDI 61

Query: 54  TDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            D   +         I H A  +  +  L DPS F   N  G   +++AA++       +
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHV 121

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ-AASEGLPI 163
            T   +        +    +   EK+           Y  +KA +D I      S G+  
Sbjct: 122 STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKA 181

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIF 198
                   YGP +     +  ++      +   ++
Sbjct: 182 TISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY 216

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 80.0 bits (196), Expect = 2e-18
 Identities = 38/183 (20%), Positives = 64/183 (34%), Gaps = 13/183 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDY 56
             LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ D 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIY 112
            S+  A              + ++            V+  G+ ++++A ++     +   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
            S+    G       DEN      Y  + Y  +K     I +    S GL          
Sbjct: 122 ASTSEMFGLIQAERQDENTPF---YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 172 YGP 174
             P
Sbjct: 179 ESP 181

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.4 bits (184), Expect = 1e-16
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI ++GA G++   +   L  +GH V A   + ++          E    D+    + +
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE-HMTEDMFCDEFHLVDLRVMENCL 74

Query: 61  DACFGCHVIFHTAAL---VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
               G   +F+ AA    +     + S     N     N+++AA+    +++  Y SS  
Sbjct: 75  KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSAC 133

Query: 118 ALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPVYPGVIY 172
                         + E   +  +    +   K   +++      + G+         IY
Sbjct: 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIY 193

Query: 173 GPG 175
           GP 
Sbjct: 194 GPF 196

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 75.2 bits (183), Expect = 2e-16
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 9/142 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +           T ++  L S G  E V+GD+ + 
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 57  RSLVDACFGCH--VIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
             +            FH A    +   + +P   F +NV G  N+++A ++  +   IIY
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 113 TSSFFALGSTDGYIADENQVHE 134
           +S+    G  + Y  +E +   
Sbjct: 122 SSTNKVYGDLEQYKYNETETRY 143

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 72.8 bits (177), Expect = 9e-16
 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 12/144 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
            I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 64

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +D  F    +              +      +   K++  AAK      +    SS    
Sbjct: 65  MDTLFEGAHLAFIN---------TTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDH 114

Query: 120 GSTDGYIADENQVHEEKYFCTQYE 143
                + A      +        +
Sbjct: 115 SLYGPWPAVPMWAPKFTVENYVRQ 138

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 71.8 bits (174), Expect = 2e-15
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-------LVYGDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++ L      +        V  D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  D            A V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAY-DEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFA 118
           S  +
Sbjct: 132 STVS 135

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 70.8 bits (172), Expect = 4e-15
 Identities = 36/201 (17%), Positives = 71/201 (35%), Gaps = 20/201 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----------DISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L    +           +         + + G
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 52  DVTDYRSLVDACFG--CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G    +       V   + DP    A N++G  N++ AA++ K  + 
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QS 136

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYP 168
             Y +S    G   G    E+ + +     + Y  +K V +  A   +   G   + +  
Sbjct: 137 FTYAASSSTYGDHPGLPKVEDTIGKPL---SPYAVTKYVNELYADVFSRCYGFSTIGLRY 193

Query: 169 GVIY---GPGKLTTGNLVAKL 186
             ++            ++ K 
Sbjct: 194 FNVFGRRQDPNGAYAAVIPKW 214

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (162), Expect = 3e-14
 Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 7/176 (3%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +            +      V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLG-----TRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK 176
                      V ++     +  R   +     +       P+   Y   + G G 
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGP 172

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 67.2 bits (162), Expect = 8e-14
 Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 16/224 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL----ELVYGDVTDYR 57
           ++ V+G +G+ GG L   L   G +V+        +  L     +    +   GD+ D  
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 58  SLVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            L+++              +P +      P   ++ NV G   +++A +    V+ ++  
Sbjct: 70  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129

Query: 114 SSFFALGSTDGYIADENQVH--------EEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
           +S     + +                    K        S   +          G  +  
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189

Query: 166 VYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKF 209
           V  G + G G      +V  +          I          + 
Sbjct: 190 VRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH 233

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 65.9 bits (159), Expect = 2e-13
 Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA-------LELVYGDV 53
            ++L+ G +GY+G R+ +A +  GH    L R     +    +          +L+   +
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+                  + ++     +V+A KE   +++ + +
Sbjct: 64  DDHQRLVDALKQVDVVISAL---------AGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQY 142
                    +  +   +    +K    + 
Sbjct: 115 EFGMDPDIMEHALQPGSITFIDKRKVRRA 143

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.8 bits (151), Expect = 2e-12
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 20/192 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELVY 50
             L++G +G  G  L   LL +G+ V  L+RR+S+ +              ++  ++L Y
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 51  GDVTDYRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKT 106
            D+TD  SL                 +  +      P     V   G   +++A +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAA-SEGLPI 163
                    ++  GS++ + +      E   F   + Y  SK  A    +    + GL  
Sbjct: 123 DSGRTVK--YYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 180

Query: 164 VPVYPGVIYGPG 175
                     P 
Sbjct: 181 CNGILFNHESPR 192

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.8 bits (151), Expect = 3e-12
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 17/185 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLPSEGALELVYGDVTD 55
           +LV+G +GY+G      L++ G+        ++        +  L     +     D+ D
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHH-IPFYEVDLCD 62

Query: 56  YRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            + L      +    + H A    V      P R++  N+ G   +++  ++   V K +
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFV 121

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKI---ALQAASEGLPIVPVY 167
           ++SS    G    +        E     T  Y  +K   + I      +  +      + 
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

Query: 168 PGVIY 172
                
Sbjct: 182 YFNPI 186

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 62.7 bits (150), Expect = 4e-12
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
          M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1  MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60 VD 61
          ++
Sbjct: 61 IE 62

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (140), Expect = 7e-11
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 21/191 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA------------LELV 49
           K+LV+G +GY+G      LL+ G+    +    +   G  S               +E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA----ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             D+ D  +L         +          V   +  P  ++ VN+ G   +++  K   
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK--IALQAASEGLPI 163
               +  +S+       +      ++ H        Y +SK   ++    L  A +    
Sbjct: 124 VKNLVFSSSATV---YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180

Query: 164 VPVYPGVIYGP 174
           V +      G 
Sbjct: 181 VLLRYFNPTGA 191

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 57.5 bits (137), Expect = 1e-10
 Identities = 24/178 (13%), Positives = 45/178 (25%), Gaps = 3/178 (1%)

Query: 1   MK-ILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYR 57
           +  +LV+GASG  G  +   L +       + LVR       +  E  + +      D  
Sbjct: 3   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSI 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +         VI  +A        DP++                 +    +  I  +   
Sbjct: 63  NPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 122

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
            +       +      +                K     A  G P   +  G +    
Sbjct: 123 GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 57.9 bits (138), Expect = 1e-10
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL--------ELVYGD 52
           +IL+ GA+GY+G  +  A L  GH    LVR ++  S       L         +V+G 
Sbjct: 4  SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 53 VTDYRSLVDACFGCHVIFHTAALVEPW 79
          + D+ SLV+A     V+  T   ++  
Sbjct: 64 IDDHASLVEAVKNVDVVISTVGSLQIE 90

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 55.6 bits (132), Expect = 7e-10
 Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 22/195 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 2   MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 48

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +       +       V+         + +N  G KN+  AA         I T      
Sbjct: 49  NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV--- 105

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
                +  +  +   E               +      +       V    +YG G    
Sbjct: 106 -----FDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFV 160

Query: 180 GNLVAKLQWKKVDLV 194
             ++   +      V
Sbjct: 161 KTMINLGKTHDELKV 175

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 50.7 bits (119), Expect = 3e-08
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 13/62 (20%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
          M IL+ G +G +G  L  +L   G+ +   V                   GD ++ + + 
Sbjct: 1  MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------FCGDFSNPKGVA 47

Query: 61 DA 62
          + 
Sbjct: 48 ET 49

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.7 bits (119), Expect = 4e-08
 Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 22/89 (24%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGA------------ 45
           +++V G  GY G      L K+ + V     LVRR  D                     
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61

Query: 46 -------LELVYGDVTDYRSLVDACFGCH 67
                 +EL  GD+ D+  L ++     
Sbjct: 62 KALTGKSIELYVGDICDFEFLAESFKSFE 90

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           + LV+GA   +G     AL   G  V A+ R  SD+  L  E   +E V  D+ D+ +  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATE 66

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F+VN+  +  V Q          + 
Sbjct: 67  KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 126

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
            +    +         +       K   T   ++      +A++     + +  V P V+
Sbjct: 127 GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKA------MAMELGPHKIRVNSVNPTVV 180

Query: 172 YGP 174
              
Sbjct: 181 LTD 183

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.5 bits (111), Expect = 2e-07
 Identities = 7/37 (18%), Positives = 18/37 (48%)

Query: 2  KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS 38
          ++L++GA+G  G  L   +L +    + +      ++
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA 40

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           ++LV+GA   +G     AL   G  V A+ R  +D+  L  E   +E V  D+ D+ +  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATE 68

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F VN+  +  V Q          + 
Sbjct: 69  RALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
                 +   +   + + +     K       +       +AL+     + +  V P V+
Sbjct: 129 GAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKV------MALELGPHKIRVNAVNPTVV 182

Query: 172 YGP 174
              
Sbjct: 183 MTS 185

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 47.0 bits (111), Expect = 5e-07
 Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 32/190 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTD 55
            ++   A G +G      L+K+      ++ R  + + L        +  +     DVT 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 56  YRSLVDACF----------GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             +                   +                R  A+N  GL N   A  +  
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQI----ERTIAINFTGLVNTTTAILDFW 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
              K         + S  G+ A              Y  SKA      + +A  A   G+
Sbjct: 123 DKRKGGPGGIIANICSVTGFNAIHQVPV--------YSASKAAVVSFTNSLAKLAPITGV 174

Query: 162 PIVPVYPGVI 171
               + PG+ 
Sbjct: 175 TAYSINPGIT 184

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 29/190 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-- 59
            +LV+G +  +G  +  A  ++G  V AL     +   +           D+ D R    
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALV-ALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65

Query: 60  -----------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
                      VD       I    + +   LP+  R   VN+    ++   A       
Sbjct: 66  FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 125

Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIV 164
                     + S  G  A++            Y  SK     +   +AL  A   + + 
Sbjct: 126 GGGA---IVNVASVQGLFAEQENAA--------YNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 165 PVYPGVIYGP 174
            V PG I   
Sbjct: 175 AVAPGAIATE 184

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS 38
            + + GASG  G  L   +L+QG    V  + RR     
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD 54

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 45.6 bits (106), Expect = 2e-06
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 23/92 (25%)

Query: 1  MKILVSGASGYLGGRLCHALLKQ-GHSVRAL----------------------VRRTSDI 37
          M++LV G +GY+G     ALL+   HSV  +                      ++++   
Sbjct: 3  MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 38 SGLPSEGALELVYGDVTDYRSLVDACFGCHVI 69
              ++    L  GDV +   L         I
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPI 94

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 21/146 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYR 57
           +L++GA   +G    +   K    +         +    ++       +     D ++  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 69

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA--- 101
            +             V        + +T+ L     P   + F VNV       +A    
Sbjct: 70  DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129

Query: 102 KETKTVEKIIYTSSFFALGSTDGYIA 127
                   I+  +S     S    +A
Sbjct: 130 MTKNNHGHIVTVASAAGHVSVPFLLA 155

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTD 55
            LV+GASG +G  +  AL++QG  V    R   +I  L +E       G L     D+++
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 56  YRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
              +             VD C     +     L+          F VNV  L    + A 
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 132

Query: 102 ---KETKTVE-KIIYTSSFFAL 119
              KE    +  II  +S    
Sbjct: 133 QSMKERNVDDGHIININSMSGH 154

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 43.6 bits (102), Expect = 5e-06
 Identities = 36/187 (19%), Positives = 59/187 (31%), Gaps = 21/187 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            L++G++  +G     A +++G  V              +E   A   +  DVTD  S+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASID 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       +D       +F  A +VE       R FA+NV G   ++QA       
Sbjct: 68  RCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIA 127

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
                     A  +     A        K       +S        L     G+ +  + 
Sbjct: 128 GGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS------AGLNLIRHGINVNAIA 181

Query: 168 PGVIYGP 174
           PGV+ G 
Sbjct: 182 PGVVDGE 188

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 31/200 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  L---------------VDACFGCHVIFHT-AALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
           L               +        +  +     EP     +    VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 102 ------KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
                    ++ +++  + +     S+      +N     ++    Y  SKA        
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRT 185

Query: 152 IALQAASEGLPIVPVYPGVI 171
           +A+    + + +V   PG +
Sbjct: 186 LAVDLKDDNVLVVNFCPGWV 205

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 9e-06
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 16/182 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSV-------RALVRRTSDISGLPSEGALELVYGDVTD 55
            LV+GA+  +G     ALL +G  V        A V+  + +           +  DV D
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 56  YRSL------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            + L      V   FG   I    A V     +  +   +N+  + +      +  + + 
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILVNNAGVNNE-KNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                    + S  G +    Q                 +  +A    + G+ +  + PG
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV--YCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 182

Query: 170 VI 171
            +
Sbjct: 183 FV 184

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 15/195 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G +G +GG++   L ++G     LV R    SG  ++GA ELV            A
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSR----SGPDADGAGELVAELEALGARTTVA 67

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
                       L+     D       +     +       T    +    +      + 
Sbjct: 68  ACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNL 127

Query: 123 DGYIADENQVHEEKYFCTQ----------YERSKAVADKIALQAASEGLPIVPVYPGVIY 172
                + +      +              Y    A  D +A Q  S+GLP   V  G   
Sbjct: 128 HELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWA 187

Query: 173 GPGKLTTGNLVAKLQ 187
           G G +  G +  + +
Sbjct: 188 GSG-MAEGPVADRFR 201

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 35/193 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL-- 59
           ++V+G    +G  +  A +  G  V    +  S    L  E      +  DVT    +  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 68

Query: 60  -----------VDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKET--K 105
                      +D               E        +   +N+ G   + + A     K
Sbjct: 69  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
           +   +I  SS          +               Y  +K     +   +AL  +  G+
Sbjct: 129 SQGNVINISSLVGAIGQAQAVP--------------YVATKGAVTAMTKALALDESPYGV 174

Query: 162 PIVPVYPGVIYGP 174
            +  + PG I+ P
Sbjct: 175 RVNCISPGNIWTP 187

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 41.9 bits (96), Expect = 3e-05
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
          I+V+G +G++G  +  AL  +G +   +V    D  G      ++L   D  D    +  
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--GTKFVNLVDLNIADYMDKEDFLIQ 59

Query: 63 CFGCHVIFHTAA 74
                     A
Sbjct: 60 IMAGEEFGDVEA 71

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 22/147 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           +L++G +  LG  L    + +G  V  L +    ++ L ++    +  + GDV       
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQK 67

Query: 60  ------------VDACFGCHVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAK 102
                       +D       I+  +  +               F +NV+G  + V+A  
Sbjct: 68  QAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACL 127

Query: 103 ETKTVEK--IIYTSSFFALGSTDGYIA 127
                 +  +I+T S        G   
Sbjct: 128 PALVASRGNVIFTISNAGFYPNGGGPL 154

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 26/191 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY- 56
            LV+G S  +G  +   L   G SV    R   +++   ++       +E    D++   
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 70

Query: 57  --RSLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             + L++     F   +        I       +  + D S   ++N E   ++   A  
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                +     +   + S  G +A   +      +         +   +A + A + + +
Sbjct: 131 FLKASERG---NVVFISSVSGALAVPYE----AVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 164 VPVYPGVIYGP 174
             V PGVI   
Sbjct: 184 NGVGPGVIATS 194

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 40.0 bits (93), Expect = 9e-05
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 27/192 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYR 57
            +++G +G +G       ++ G  V  +     D      + + S   +  V+ DVT   
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKV-VIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE 67

Query: 58  SL-------------VDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
            +             +D  FG   +  T   +++E    D  R   +NV G   V + A 
Sbjct: 68  DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                 K        ++ S        +     K+       S      +  +    G+ 
Sbjct: 128 RVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS------LCTELGEYGIR 181

Query: 163 IVPVYPGVIYGP 174
           +  V P ++  P
Sbjct: 182 VNCVSPYIVASP 193

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 43/220 (19%), Positives = 63/220 (28%), Gaps = 36/220 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
            LV+G +  LG     AL  +G+ V  L  R            L  V GDVT    +  A
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLR-------REGEDLIYVEGDVTREEDVRRA 56

Query: 63  CFGCHVIFHTAALV----------------EPWLPDPSRFFAVNVEGLKNVVQAA---KE 103
                      A+V                   L    R   VN+ G  NV++ A     
Sbjct: 57  VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMR 116

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
               +            S   +     Q      +        A+    A + A  G+ +
Sbjct: 117 ENPPDAEGQRGVIVNTASVAAFEGQIGQAA----YAASKGGVVALTLPAARELAGWGIRV 172

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERM 203
           V V PG+        T  L    +  K  L   +    R+
Sbjct: 173 VTVAPGLF------DTPLLQGLPEKAKASLAAQVPFPPRL 206

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 38/200 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALV-------RRTSDISGLPSE-----GALELVY 50
           +L++GA   +G  +     +                R  +D+  +  E        + + 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 51  GDVTDYRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
            D++D   +             +D       +    AL +    D       N++G   +
Sbjct: 64  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 123

Query: 98  VQAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL 154
            QA       +    I + +S  A  +                +C      + + + + L
Sbjct: 124 TQALFALMERQHSGHIFFITSVAATKAFRHSSI----------YCMSKFGQRGLVETMRL 173

Query: 155 QAASEGLPIVPVYPGVIYGP 174
            A    + I  V PG +Y P
Sbjct: 174 YARKCNVRITDVQPGAVYTP 193

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 25/191 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDY 56
           ++++G+S  LG  +      +   V    R   D +    E      G    V GDVT  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 57  RSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             +             +D       + +  +  E  L D ++    N+ G     + A +
Sbjct: 70  SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                 I  T    +                 K        +      +AL+ A +G+ +
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET------LALEYAPKGIRV 183

Query: 164 VPVYPGVIYGP 174
             + PG I  P
Sbjct: 184 NNIGPGAINTP 194

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 25/189 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+G +  +G  +   LL +G  V       +    L +E       V  DV+      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       ++       I     +    L D SR   +N E +    Q        
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128

Query: 108 EK--IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
               II  +S  +    + Y          K   +   R+ A+    + +     + +  
Sbjct: 129 TGGSIINMASVSSWLPIEQYAG----YSASKAAVSALTRAAAL----SCRKQGYAIRVNS 180

Query: 166 VYPGVIYGP 174
           ++P  IY P
Sbjct: 181 IHPDGIYTP 189

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 16/117 (13%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYR 57
            +++G +  +G  +    +++G  V  +  R SD+       + +   ++    D +D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKV-MITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED 67

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                          V        I    ++ E    +  +  AVN++G+    +  
Sbjct: 68  GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 38.6 bits (89), Expect = 3e-04
 Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 30/191 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+GAS  +G  +   L  +G  V       +    +        + +  +VTD  S+ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 66

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       VD       I     L+     + +     N+  +  + +A       
Sbjct: 67  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK 126

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPI 163
           ++         +GS  G + +  Q +        Y  +KA     +  +A + AS G+ +
Sbjct: 127 KR---HGRIITIGSVVGTMGNGGQAN--------YAAAKAGLIGFSKSLAREVASRGITV 175

Query: 164 VPVYPGVIYGP 174
             V PG I   
Sbjct: 176 NVVAPGFIETD 186

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Length = 128

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 14/119 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK  + G SG +G  +     ++GH +   V           +  ++    +       +
Sbjct: 1   MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              +   ++  T AL E              E L+ + + +KE   V+    T      
Sbjct: 61  CKKYRAGLVLGTTALKE--------------EHLQMLRELSKEVPVVQAYSRTVFAIGA 105

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 38/214 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           ++++G +  LG       +  G  V        + +    E   A    + DVT      
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQ 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA----KE 103
                       VD       I     L    +    +   +N+ G+   ++      K+
Sbjct: 68  RVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD 127

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASE 159
                 I+  SS   L       +              Y  SK     ++   A++  ++
Sbjct: 128 AGGG-SIVNISSAAGLMGLALTSS--------------YGASKWGVRGLSKLAAVELGTD 172

Query: 160 GLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDL 193
            + +  V+PG+ Y P    TG    +  +    +
Sbjct: 173 RIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM 206

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 33/200 (16%), Positives = 54/200 (27%), Gaps = 45/200 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV------------- 49
           +LV+GA G LG     A  ++G  V                 A + V             
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 50  -YGDVTDYRSLV----------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVV 98
            Y  V     LV          D       I    +       D      V++ G   V 
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129

Query: 99  QAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
           +AA +    +    II T+S   +    G                 Y  +K     +A+ 
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQAN--------------YSAAKLGLLGLANT 175

Query: 152 IALQAASEGLPIVPVYPGVI 171
           + ++     +    + P   
Sbjct: 176 LVIEGRKNNIHCNTIAPNAG 195

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 28/190 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LVSG +  +G     A++ +G  V        +   + +E   A   V+ DVT      
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--- 104
                       +        I +   + +  L +  R   VN+ G+   ++A  +    
Sbjct: 69  AAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE 128

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
                II  SS   L  T             K+      +S       AL+    G+ + 
Sbjct: 129 AGRGSIINISSIEGLAGTVACHGY----TATKFAVRGLTKS------TALELGPSGIRVN 178

Query: 165 PVYPGVIYGP 174
            ++PG++  P
Sbjct: 179 SIHPGLVKTP 188

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 28/119 (23%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTD 55
           K+ V GASG +G  L   LLK    V  L     DI+  P      S             
Sbjct: 2   KVAVLGASGGIGQPLSL-LLKNSPLVSRLTLY--DIAHTPGVAADLSHIETRATVKGYLG 58

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              L D   GC V+   A +           F  N   +  +  A  +      I   S
Sbjct: 59  PEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (84), Expect = 7e-04
 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALEL------VYGDVT 54
           MK+ V GA+G +G  L   L  Q  S   L     DI+ +    A++L      V     
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSL--YDIAPVTPGVAVDLSHIPTAVKIKGF 58

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                  A  G  V+  +A +      D S  F VN   +KN+VQ   +T     I   +
Sbjct: 59  SGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.3 bits (86), Expect = 9e-04
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 26/192 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY 56
            +LV+G +  +G  +       G  +    R   +++   S+       +     D +  
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69

Query: 57  RSL--------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
                            +D          +   ++    D S   + N+E   ++ Q A 
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                          ++          +     K    Q  R+      +A + AS+G+ 
Sbjct: 130 PLLKASGCGNIIFMSSIAGVVSAS-VGSIYSATKGALNQLARN------LACEWASDGIR 182

Query: 163 IVPVYPGVIYGP 174
              V P VI  P
Sbjct: 183 ANAVAPAVIATP 194

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 35/214 (16%), Positives = 65/214 (30%), Gaps = 24/214 (11%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYRS 58
           LV+GA   +G  +   L+K G +V       +    + SE     G    V  DV+D   
Sbjct: 5   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 64

Query: 59  L-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           +              D       +  +  +         + + +NV+G+   +QAA E  
Sbjct: 65  VFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAF 124

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
             E            +      +       K+      ++       A   A  G+ +  
Sbjct: 125 KKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQT------AARDLAPLGITVNG 178

Query: 166 VYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFL 199
             PG++  P        V++   K +      F 
Sbjct: 179 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA 212

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 31/190 (16%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYRS 58
           LV+GA+  +G  +   L K+G  V    R    +     E        +    DV     
Sbjct: 6   LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 65

Query: 59  L-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA-KET 104
           +             VD            A  E            N+ G+  V +   K  
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAG 125

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
             +E+        A       +         K+    + ++      + L+ A  G+ + 
Sbjct: 126 GMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA------LGLELARTGITVN 179

Query: 165 PVYPGVIYGP 174
            V PG +  P
Sbjct: 180 AVCPGFVETP 189

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD------- 55
           I+++ A+  +G     A  ++G  V A     S +  L     ++    DVT        
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF 68

Query: 56  --YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                 +D  F      H   +++    D      +NV  +  +++A 
Sbjct: 69  ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAF 116

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-- 59
            +L++GA+  +G        K+G  + A       +           V  DV D  S+  
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVER 66

Query: 60  -----------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
                      +D       I       +  L D      VN+ G   V +AA E    +
Sbjct: 67  GFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126

Query: 109 KIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKIALQAASEGLPIVPV 166
                     L ++  Y+ +  Q +            R+      +AL+    G+ +  +
Sbjct: 127 N----PGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT------LALELGRWGIRVNTL 176

Query: 167 YPGVIYGP 174
            PG I   
Sbjct: 177 APGFIETR 184

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 25/192 (13%), Positives = 54/192 (28%), Gaps = 31/192 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYR 57
            +++G +  +G  +      +G  +       +      I  L     +  V  DV+   
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPG 65

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET 104
            +              D       I+      E       + F +NV+    + +A    
Sbjct: 66  DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEE--KYFCTQYERSKAVADKIALQAASEGLP 162
                         L ST  ++  E   H    K     + R+      +A     +G+ 
Sbjct: 126 MKRNG---WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRA------LASDLGKDGIT 176

Query: 163 IVPVYPGVIYGP 174
           +  + P ++   
Sbjct: 177 VNAIAPSLVRTA 188

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 27/191 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGA-LELVYGDVTDY 56
            L +GA   +G  +   L ++G SV      +S      ++ L   GA    +  D++  
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 68

Query: 57  RSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             +             +D       +      +E       + F +N  G   V Q   +
Sbjct: 69  SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK 128

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                  I  +S  A  +    I +       K     + R+       A+   ++G+ +
Sbjct: 129 HCRRGGRIILTSSIA--AVMTGIPNHALYAGSKAAVEGFCRA------FAVDCGAKGVTV 180

Query: 164 VPVYPGVIYGP 174
             + PG +   
Sbjct: 181 NCIAPGGVKTD 191

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 40/198 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVT 54
            +++G+S  +G        ++G  V    R    +            SE  +  V  DVT
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 55  DYRSL-------------VDACFGCHVIFHTAALVEPWLPDP----SRFFAVNVEGLKNV 97
                             +D            +  +               +N+  +  +
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 127

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIA 153
            + A    +  K              G  A  +  +        Y  +KA         A
Sbjct: 128 TKKAVPHLSSTKGEI---VNISSIASGLHATPDFPY--------YSIAKAAIDQYTRNTA 176

Query: 154 LQAASEGLPIVPVYPGVI 171
           +     G+ +  + PG++
Sbjct: 177 IDLIQHGIRVNSISPGLV 194

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 25/188 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL 59
            ILV+GA+  +G        ++G S+ A+ R    ++   +        V  DV+D +++
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAV 66

Query: 60  -------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
                        +        + H+A      L    +   VN+ G   V + A E   
Sbjct: 67  EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE 126

Query: 107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPV 166
               +  +   A     G           K       R+      +AL+ A +G+ +  +
Sbjct: 127 EGGSLVLTGSVAGLGAFGLAH----YAAGKLGVVGLART------LALELARKGVRVNVL 176

Query: 167 YPGVIYGP 174
            PG+I  P
Sbjct: 177 LPGLIQTP 184

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 12/92 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALEL------VYGDVTD 55
            I+V+G +  +G     A+   G +V  + R  +D   +  +   E          DV++
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 56  YRSL------VDACFGCHVIFHTAALVEPWLP 81
              +      +DA  G        A V    P
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKP 102

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 32/197 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVT 54
           ++++G+S  +G        ++G +V    R +  +            SE  +  V  DVT
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 55  DY---RSLVDAC---FGCHVIFHTAA-----------LVEPWLPDPSRFFAVNVEGLKNV 97
                  ++++    FG   +    A             +  +    +   +N++ +  +
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 127

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA 157
            +  K      K              G  A  + +    Y+              A+  A
Sbjct: 128 TKKVKPHLVASK---GEIVNVSSIVAGPQAQPDFL----YYAIAKAALDQYTRSTAIDLA 180

Query: 158 SEGLPIVPVYPGVIYGP 174
             G+ +  V PG++   
Sbjct: 181 KFGIRVNSVSPGMVETG 197

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.98
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.97
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.97
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.97
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.97
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.97
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.97
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.97
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.97
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.96
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.96
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.96
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.96
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.96
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.96
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.96
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.96
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.96
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.96
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.96
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.96
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.96
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.96
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.96
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.95
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.95
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.95
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.95
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.95
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.95
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.95
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.95
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.95
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.95
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.94
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.94
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.93
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.93
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.93
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.93
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.93
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.93
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.93
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.92
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.92
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.92
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.91
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.91
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.91
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.91
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.9
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.9
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.9
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.89
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.89
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.89
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.89
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.88
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.87
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.85
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.85
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.85
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.85
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.84
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.84
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.83
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.83
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.77
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.72
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.66
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.47
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.8
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.77
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.6
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.58
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.52
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.42
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.41
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.35
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.33
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.3
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.3
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.3
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.29
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.24
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.22
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.19
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	98.18
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	98.16
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.14
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.12
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.95
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.93
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.75
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.75
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.72
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.71
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.7
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.63
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.57
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.52
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.51
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.5
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.47
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.44
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.38
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.37
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.33
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.33
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.26
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.23
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.22
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.16
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.14
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.11
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.09
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.06
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.04
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.97
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.93
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.92
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.91
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.91
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.86
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.84
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.83
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.8
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.66
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.61
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.6
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.56
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.54
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.48
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.47
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.37
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.35
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.32
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.26
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.24
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.23
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.16
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.15
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.14
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.14
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.12
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.04
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.0
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.98
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.91
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.9
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.89
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.87
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.87
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.87
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.83
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.83
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.82
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.8
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.78
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.78
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.77
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	95.75
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.73
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.73
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.71
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.66
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.66
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.64
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.58
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.58
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.54
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.54
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.48
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.43
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.4
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.39
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.38
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.32
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.25
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.22
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.19
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.18
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.17
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.11
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.07
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.05
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.98
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.93
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.92
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.9
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.84
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.82
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	94.71
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.7
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.68
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.64
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.63
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.56
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.55
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.48
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.45
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.44
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.41
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.29
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.28
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.26
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.2
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.14
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.13
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.0
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.92
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.7
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.7
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.65
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.4
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	93.39
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	93.35
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	93.34
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.02
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.91
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.91
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.89
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.83
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.67
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.6
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.48
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	92.36
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.33
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.33
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.06
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.05
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.01
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.96
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.69
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	91.55
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.53
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.25
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.92
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.76
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.75
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	90.71
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	90.7
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.68
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	90.68
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.17
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.11
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	89.86
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.38
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.08
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	89.04
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	88.97
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.9
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.86
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.51
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	88.32
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.03
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.96
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.53
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.49
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.46
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.99
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	86.99
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	86.88
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	86.82
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	86.75
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.68
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	86.58
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.48
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	86.39
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	86.01
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.75
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.61
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	84.6
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	84.58
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.53
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.22
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	84.07
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.92
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.75
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.41
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.15
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.06
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.95
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.87
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.2
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	81.95
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	81.89
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.77
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	81.4
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.39
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.25
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.09
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	80.02

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2.9e-31  Score=221.15  Aligned_cols=172  Identities=19%  Similarity=0.196  Sum_probs=139.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-----CCCCC-----CCCCCeEEEEccCCChhhHHhhcCC--ccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-----DISGL-----PSEGALELVYGDVTDYRSLVDACFG--CHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-----~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~--~d~v   69 (229)
                      +|||||||||||++|+++|+++|++|++++|...     +.+.+     ....+++++++|++|.+++.+++++  +|+|
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEV   82 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEE
Confidence            5789999999999999999999999999999543     22221     1125789999999999999999984  6999


Q ss_pred             EEeCccc--CCCCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           70 FHTAALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        70 i~~a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ||+|+..  ..+..++.+.+++|+.||.+|+++|+....  ..+|||+||+.+||.....+.+|+.+..|   .+.|+.|
T Consensus        83 ~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P---~~~Y~~s  159 (357)
T d1db3a_          83 YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYAVA  159 (357)
T ss_dssp             EECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC---CSHHHHH
T ss_pred             EEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCC---CChHHHH
Confidence            9999874  335567888999999999999999987642  34899999999998766566667665443   5779999


Q ss_pred             HHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       146 K~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      |.++|.+++.+.+ ++++++++||+++|||..
T Consensus       160 K~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~  191 (357)
T d1db3a_         160 KLYAYWITVNYRESYGMYACNGILFNHESPRR  191 (357)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeccccCCCC
Confidence            9999999999875 489999999999999964

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=5.3e-31  Score=207.53  Aligned_cols=189  Identities=22%  Similarity=0.195  Sum_probs=147.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+++||++++++|+++|++|++++|+.+..+      .+..+++|++|+++++++++       ++|++|||||
T Consensus         9 ~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           9 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence            6899999999999999999999999999999876544      45678999999999877654       5899999999


Q ss_pred             ccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ...      .+.++|++.+++|+.+++.+.+.+.+.+   +.++||++||..+..+.++.              ..|+.|
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------------~~Y~as  148 (237)
T d1uzma1          83 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--------------ANYAAS  148 (237)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC--------------HHHHHH
T ss_pred             ccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc--------------HHHHHH
Confidence            732      2345788999999999999999887663   23599999998877554332              349999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+    +++.++.+++++||+||+|+||.+.+|..........+.. ....+++|++.|+|++.++.||-
T Consensus       149 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~-~~~~pl~R~~~pedvA~~v~fL~  217 (237)
T d1uzma1         149 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA-LQFIPAKRVGTPAEVAGVVSFLA  217 (237)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHH-GGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHh
Confidence            99    6667778888899999999999999986432223233222 23345788999999999888764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=3e-30  Score=215.30  Aligned_cols=178  Identities=20%  Similarity=0.265  Sum_probs=138.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEE-EEEcCCC-----CCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVR-ALVRRTS-----DISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~-~~~r~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      |||||||||||||++|+++|+++|++|+ ++++...     .+..+....+++++++|++|++++.++++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            9999999999999999999999999754 4554321     13334444689999999999999998876  58999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcC--------CCceEEEEccceeeecCCCcccCCCCc-------ccc
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALGSTDGYIADENQV-------HEE  135 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~~sS~~~~~~~~~~~~~~~~~-------~~~  135 (229)
                      |+....  +..++.+++++|+.++.+++++|.+..        ..++||++||..+|+.......++...       ..+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            986432  234678899999999999999997652        234899999999999765433333211       111


Q ss_pred             ccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCCc
Q 027007          136 KYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      ..+.+.|+.+|.++|.+++.+.+ ++++++++||+.+|||+...
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~  204 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP  204 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc
Confidence            23457799999999999999874 49999999999999998643

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=5.2e-31  Score=208.25  Aligned_cols=194  Identities=21%  Similarity=0.160  Sum_probs=150.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+++||++++++|+++|++|++++|+++++++..+..+.+++++|++|+++++++++       ++|++|||||
T Consensus         7 ~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG   86 (242)
T d1ulsa_           7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG   86 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCc
Confidence            489999999999999999999999999999987655544333467889999999999877654       5899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC---ceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.+++++.+++.+.+..   .+++++||.... +.++              ...|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~-~~~~--------------~~~Y~as  151 (242)
T d1ulsa_          87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-GNLG--------------QANYAAS  151 (242)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG-CCTT--------------CHHHHHH
T ss_pred             ccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc-CCCC--------------CcchHHH
Confidence            7422      33578899999999999999999887532   366776664322 2221              2459999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |.    +++.++++++++||+||+|+||.+.+|..........+..... .+++|++.|+|++.++.||-
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~-~pl~R~~~pedia~~v~fL~  220 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAA-TPLGRAGKPLEVAYAALFLL  220 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhc-CCCCCCCCHHHHHHHHHHHh
Confidence            98    6777788888999999999999999998655444333333333 35688999999999988874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.97  E-value=2.2e-30  Score=212.65  Aligned_cols=174  Identities=26%  Similarity=0.324  Sum_probs=141.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEE------EEEcCC--CC---CCCCCCCCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVR------ALVRRT--SD---ISGLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~------~~~r~~--~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||||||||||||++++++|+++|++|.      .+++..  .+   .........++++.+|+++..........+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            9999999999999999999999998654      444321  11   122223357899999999999999998999999


Q ss_pred             EEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      +|+|+....  ...++.+.+++|+.++.+++++|.+.. .+++||+||..+|+.....+.+|+.+..|   .+.|+.+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p---~~~Y~~sK~  156 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEP---NSPYAASKA  156 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCC---CSHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCC---CCHHHHHHH
Confidence            999976322  224567889999999999999999885 68999999999999877666666665543   467999999


Q ss_pred             HHHHHHHHHHh-cCCCeEEEecCceecCCCCc
Q 027007          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       148 ~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      ++|.+++.+.+ ++++++++||+.+|||++..
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~  188 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP  188 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc
Confidence            99999999874 49999999999999998643

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=2.8e-31  Score=210.90  Aligned_cols=195  Identities=19%  Similarity=0.197  Sum_probs=149.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      .+|||||+++||++++++|+++|++|++++|+.++++++    .. ..++..+++|++|++++.++++       ++|++
T Consensus        12 valITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   91 (251)
T d2c07a1          12 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDIL   91 (251)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceee
Confidence            479999999999999999999999999999986543321    11 2368899999999999877654       58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||+....      +.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.++.              .
T Consensus        92 vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~--------------~  157 (251)
T d2c07a1          92 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ--------------A  157 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------------H
T ss_pred             eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC--------------H
Confidence            999997322      335788999999999999999987764   24699999998877554332              3


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.||+    +++.++++++++||++|+|.||.+.+|+.........+.+... .+++|++.|+|++.++.||-
T Consensus       158 ~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~-~pl~R~~~pedvA~~v~fL~  231 (251)
T d2c07a1         158 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN-IPAGRMGTPEEVANLACFLS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT-CTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            4999998    6677778888899999999999999997544333333333333 45788999999999888874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.2e-31  Score=212.09  Aligned_cols=195  Identities=17%  Similarity=0.159  Sum_probs=151.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      +++||||+++||+++++.|+++|++|++.+|++++++++.+  ..+...+++|++|.++++++++       ++|++|||
T Consensus         6 ~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn   85 (243)
T d1q7ba_           6 IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNN   85 (243)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhh
Confidence            58999999999999999999999999999998765443322  1357889999999998877664       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.++.              ..|+
T Consensus        86 Ag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~--------------~~Y~  151 (243)
T d1q7ba_          86 AGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ--------------ANYA  151 (243)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--------------HHHH
T ss_pred             hhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC--------------HHHH
Confidence            987322      335788899999999999999998775   23599999998877554432              3499


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .||.    +++.++++++++||++|+|+||.+.+|............+. ...+++|++.|+|++.++.||-
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~-~~~pl~R~~~pedvA~~v~fL~  222 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGIL-AQVPAGRLGGAQEIANAVAFLA  222 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHH-TTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHH-hcCCCCCCCCHHHHHHHHHHHh
Confidence            9998    66777788889999999999999998854322222222222 2345788999999998887774

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2e-31  Score=212.23  Aligned_cols=194  Identities=17%  Similarity=0.175  Sum_probs=150.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+++||++++++|+++|++|++++|++++++++.     ....+.++++|++|+++++++++       ++|++
T Consensus        13 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDil   92 (255)
T d1fmca_          13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDIL   92 (255)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEe
Confidence            6899999999999999999999999999999865433321     12468889999999998877654       58999


Q ss_pred             EEeCcccCC-----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        70 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      |||||....     +.++|++.+++|+.+++++++.+.+++   +.++||++||..+..+.++.              ..
T Consensus        93 vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~--------------~~  158 (255)
T d1fmca_          93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM--------------TS  158 (255)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC--------------HH
T ss_pred             eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc--------------cc
Confidence            999997422     335688899999999999999987764   23489999998776554432              34


Q ss_pred             HHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc--hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          142 YERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+.+|.    +++.++++++++||+||+|.||.+.+|....  ....... + ....+++|++.|+|++.++.||-
T Consensus       159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~-~-~~~~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK-M-LQHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHH-H-HHTCSSCSCBCHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHH-H-HhcCCCCCCcCHHHHHHHHHHHh
Confidence            999998    6777788888999999999999999875321  1222222 2 23345789999999999888874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=3.6e-31  Score=209.17  Aligned_cols=190  Identities=21%  Similarity=0.185  Sum_probs=149.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++.+|++++++.+..  ...+.++++|++|+++++++++       .+|++|||
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinn   87 (244)
T d1nffa_           8 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN   87 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEEC
Confidence            58999999999999999999999999999998765443211  1367889999999999877664       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.+++++++.+.+.+   ..++||++||..+..+.++.              ..|+
T Consensus        88 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~--------------~~Y~  153 (244)
T d1nffa_          88 AGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC--------------HGYT  153 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------------HHHH
T ss_pred             CcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc--------------cchh
Confidence            997322      335688999999999999999887654   24589999999876554432              3499


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .+|+    +++.++++++++||++|+|.||.+.+|.......      .....++++++.|+|++.++.||-
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~pl~R~~~p~diA~~v~fL~  219 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------DIFQTALGRAAEPVEVSNLVVYLA  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------TCSCCSSSSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------HHHhccccCCCCHHHHHHHHHHHh
Confidence            9998    7777788888999999999999999986432211      112245678899999999888874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=9.4e-31  Score=208.74  Aligned_cols=196  Identities=17%  Similarity=0.114  Sum_probs=133.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC--------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~--------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+++++++..     ....+..+.+|+++.++++++++        .+|+
T Consensus        10 ~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idi   89 (259)
T d1xq1a_          10 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDI   89 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCccc
Confidence            6899999999999999999999999999999876543321     12468899999999988766542        4899


Q ss_pred             EEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||||...      .+.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.+..              
T Consensus        90 lvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------------  155 (259)
T d1xq1a_          90 LINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG--------------  155 (259)
T ss_dssp             EEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C--------------
T ss_pred             ccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc--------------
Confidence            999999732      2345788999999999999999998764   24599999998876544322              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|.    +++.++.+++++||+||+|.||.+.+|..................+++|++.|+|+++++.||-
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  231 (259)
T d1xq1a_         156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC  231 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHT
T ss_pred             ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence            45999998    6677788888899999999999999987533221111122233456788999999999888874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.97  E-value=1e-30  Score=207.16  Aligned_cols=196  Identities=13%  Similarity=0.157  Sum_probs=144.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC--C-CCCCCeEEEEccCCChhhHHhhcC-------CccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--L-PSEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~   71 (229)
                      .+|||||+++||+++++.|+++|++|++.+|++.+...  + ....++..+++|++|+++++++++       ++|++||
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVn   86 (247)
T d2ew8a1           7 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN   86 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            58999999999999999999999999999997642111  0 112468899999999999877654       5899999


Q ss_pred             eCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||....      +.++|++.+++|+.+++++++++.+.+   +.++||++||..+..+.+..              ..|
T Consensus        87 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------------~~Y  152 (247)
T d2ew8a1          87 NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY--------------THY  152 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC--------------HHH
T ss_pred             CCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc--------------ccc
Confidence            9997422      335788999999999999999998764   23599999998876554332              349


Q ss_pred             HHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +.||.    +++.++.+++++||+||+|+||.+.+|...... ....+.......++++++.|+|++.++.||-
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~  226 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHT
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHh
Confidence            99998    777888888899999999999999998653221 1112223344456778999999999888763

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.9e-30  Score=212.01  Aligned_cols=173  Identities=22%  Similarity=0.310  Sum_probs=138.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------CCCCCeEEEEccCCChhhHHhhcC--CccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~   72 (229)
                      ||||||||+||||++|+++|+++|++|++++|-.......      ....+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            9999999999999999999999999999998743322210      012378999999999999999987  79999999


Q ss_pred             CcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHH
Q 027007           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (229)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e  150 (229)
                      |+....  +..++.+.+++|+.||.+++++|++.+ ++++|++||..+|+........|....  ..+...|+.+|..+|
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~--~~p~~~Y~~sK~~~e  157 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCC--CCCSSHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEcccccccccccccc--CCCcchHHHHHhhhh
Confidence            986432  334677899999999999999999985 789999999999987654443333221  123567999999999


Q ss_pred             HHHHHHH-h-cCCCeEEEecCceecCCC
Q 027007          151 KIALQAA-S-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       151 ~~~~~~~-~-~gi~~~~irpg~i~g~~~  176 (229)
                      .++..+. . .+++++++||+++|||..
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         158 QILTDLQKAQPDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred             HHHHHHHhhccCCeEEEEeeccEEeccC
Confidence            9998765 3 379999999999999864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.8e-30  Score=209.49  Aligned_cols=171  Identities=20%  Similarity=0.306  Sum_probs=131.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCC---CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      .|||||||+||||++++++|+++|++|++++|... +.+.+   .....+++...|+     ++.++.++|+|||+|+..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECcccC
Confidence            37999999999999999999999999999987432 22221   1222444455554     445567899999999864


Q ss_pred             CC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccc--cccccCcHHHHHHHHHHH
Q 027007           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--EKYFCTQYERSKAVADKI  152 (229)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~~~e~~  152 (229)
                      ..  +..++.+.+++|+.++.+|++++++..  .++||+||.++|+.....+.+|....+  +..+.+.|+.+|.++|.+
T Consensus        77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            32  345778899999999999999999875  389999999999976555555543322  223456799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCCCc
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      ++.+.+ +|++++++||+.+|||+...
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~  181 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTFGPRMHM  181 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCT
T ss_pred             HHHHHHHhCCcEEEEEeeeEECCCCCC
Confidence            999864 59999999999999997643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.5e-31  Score=208.51  Aligned_cols=194  Identities=15%  Similarity=0.160  Sum_probs=150.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC-------CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a   73 (229)
                      ++|||||+++||+++++.|+++|++|++.+|++++++.+.. ...+.++++|++|+++++++++       ++|++||||
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnA   87 (250)
T d1ydea1           8 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA   87 (250)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecc
Confidence            58999999999999999999999999999998765443221 1367889999999999877764       589999999


Q ss_pred             cccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           74 ALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        74 ~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      |....       +.++|++.+++|+.+++++++++.+++.  .++||++||..+..+.+..              ..|+.
T Consensus        88 G~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~--------------~~Y~a  153 (250)
T d1ydea1          88 GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA--------------VPYVA  153 (250)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC--------------HHHHH
T ss_pred             cccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc--------------chhHH
Confidence            96321       2245888999999999999999987752  2599999999876554332              34999


Q ss_pred             HHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc-------hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +|.    +++.++++++++||+||+|+||++.+|+...       ......+..  ...+++|++.|+|++.++.||-
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~pl~R~g~p~eva~~v~fL~  229 (250)
T d1ydea1         154 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM--LAQPLGRMGQPAEVGAAAVFLA  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH--HTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHH--hcCCCCCCCCHHHHHHHHHHHh
Confidence            998    7778888888999999999999998874211       111122211  2235688999999999998874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=9.7e-31  Score=207.32  Aligned_cols=194  Identities=21%  Similarity=0.254  Sum_probs=148.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+++||++++++|+++|++|++.+|+++..+. .+.....++++|++|.++++++++       ++|++|||||
T Consensus         7 ~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG   85 (248)
T d2d1ya1           7 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAA   85 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCc
Confidence            68999999999999999999999999999998654221 111245788999999998877654       5899999999


Q ss_pred             ccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      ....      +.++|++.+++|+.+++++++++.+++.   .++||++||..++.+.+..              ..|+.+
T Consensus        86 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~--------------~~Y~as  151 (248)
T d2d1ya1          86 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN--------------AAYNAS  151 (248)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB--------------HHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc--------------chhHHH
Confidence            7322      3356888999999999999999988752   3599999999876554432              349999


Q ss_pred             HH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch------hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       146 K~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      |+    +++.++++++++||+||+|.||.+.+|+....      .....+. .....+++|++.|+|+++++.||-
T Consensus       152 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~pl~R~~~pedia~~v~fL~  226 (248)
T d2d1ya1         152 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRD-WEDLHALRRLGKPEEVAEAVLFLA  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHH-HHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            98    67777888889999999999999988742110      0111111 223345688999999998888774

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.96  E-value=1.3e-30  Score=207.06  Aligned_cols=196  Identities=15%  Similarity=0.158  Sum_probs=148.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      ++|||||+++||+++++.|+++|++|++.+|+.++++.    +.....+.++++|++|+++++++++       ++|++|
T Consensus         8 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   87 (251)
T d1zk4a1           8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLV   87 (251)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEE
Confidence            58999999999999999999999999999998654332    2223478899999999998877654       589999


Q ss_pred             EeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---C-ceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---V-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ||||....      +.++|++.+++|+.+++++++++.+.+.   . ++||++||..++.+.+..              .
T Consensus        88 nnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~--------------~  153 (251)
T d1zk4a1          88 NNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL--------------G  153 (251)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC--------------H
T ss_pred             eccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc--------------h
Confidence            99997322      3356888999999999999999987642   2 379999998776544332              3


Q ss_pred             cHHHHHH----HHHHHHHHH--HhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKA----VADKIALQA--ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~--~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|.    +++.+++++  .++||+||+|.||.+.+|..................+++|++.|+|++.++.||-
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~  230 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence            4999998    455666663  3679999999999999875322211111222233346788999999999988874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=2e-30  Score=205.90  Aligned_cols=194  Identities=19%  Similarity=0.128  Sum_probs=148.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC----C--CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++.++..    .  ...+.++++|++|+++++++++       ++|+
T Consensus         7 ~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_           7 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999865433211    1  1367889999999999877654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEcccee-eecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFA-LGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||||....      +.++|++.+++|+.+++++++++.+++.   .+++|++||..+ ..+.++              
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~--------------  152 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------------  152 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc--------------
Confidence            9999997322      3457889999999999999999988753   349999998654 222222              


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh---HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|.    +++.++++++++||++|+|.||.+.+|+.....   ..... . ....+++|++.|+|++.++.||-
T Consensus       153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~-~-~~~~pl~R~~~pedvA~~v~fL~  230 (251)
T d1vl8a_         153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY-M-LKRIPLGRTGVPEDLKGVAVFLA  230 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHH-H-HHTCTTSSCBCGGGGHHHHHHHH
T ss_pred             ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHH-H-HhcCCCCCCCCHHHHHHHHHHHh
Confidence            234999998    667777888889999999999999999753221   11111 2 22345688999999999888764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=205.89  Aligned_cols=195  Identities=22%  Similarity=0.208  Sum_probs=150.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC---CccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~~   77 (229)
                      ++|||||+++||++++++|+++|++|++++|++++++++.. ...++.+.+|++|.++++++++   ++|++||||+...
T Consensus         9 ~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~   88 (244)
T d1pr9a_           9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecccccc
Confidence            68999999999999999999999999999998765443221 1367889999999999988776   5899999999732


Q ss_pred             ------CCCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH
Q 027007           78 ------PWLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        78 ------~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                            .+.++|++.+++|+.+++++.+.+.+.+    ..++||++||.++..+.+..              ..|+.||.
T Consensus        89 ~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~--------------~~Y~asKa  154 (244)
T d1pr9a_          89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH--------------SVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB--------------HHHHHHHH
T ss_pred             ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch--------------hhhhhhHH
Confidence                  2345788999999999999999887642    34699999998876554432              34999998


Q ss_pred             ----HHHHHHHHHHhcCCCeEEEecCceecCCCCch--hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          148 ----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       148 ----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                          +++.++.+++++||++|+|+||.+.+|.....  .....+... ...+++|++.|+|+++++.||-
T Consensus       155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~-~~~pl~R~~~peevA~~v~fL~  223 (244)
T d1pr9a_         155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTML-NRIPLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHH-TTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHH-hcCCCCCCcCHHHHHHHHHHHh
Confidence                66777788888999999999999999853211  111122222 2345688999999999888774

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.96  E-value=1.4e-30  Score=207.66  Aligned_cols=196  Identities=15%  Similarity=0.185  Sum_probs=150.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++++..       ....++..+++|++|+++++++++       ++|
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   85 (258)
T d1iy8a_           6 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   85 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999987543321       122367889999999999877654       589


Q ss_pred             EEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      ++|||||....       +.++|++.+++|+.+++++++++.+.+   ..++||++||..+..+.+..            
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~------------  153 (258)
T d1iy8a_          86 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ------------  153 (258)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB------------
T ss_pred             EEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc------------
Confidence            99999996321       335688999999999999999987754   24599999998776544332            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch--------hHHHHHHhhcccceeeeehhhHhhhh
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                        ..|+.+|.    +++.++++++++||+||+|.||.+.+|+....        .....+ ......+++|++.|+|+++
T Consensus       154 --~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~pl~R~~~p~dvA~  230 (258)
T d1iy8a_         154 --SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE-EFIQVNPSKRYGEAPEIAA  230 (258)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH-HHHTTCTTCSCBCHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHH-HHHhcCCCCCCcCHHHHHH
Confidence              44999998    77788888889999999999999998752111        011111 1123345788999999999


Q ss_pred             hhHHHHH
Q 027007          206 SCKFLTW  212 (229)
Q Consensus       206 ~~~~l~~  212 (229)
                      ++.||-.
T Consensus       231 ~v~fL~S  237 (258)
T d1iy8a_         231 VVAFLLS  237 (258)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHhC
Confidence            8887753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=7.7e-31  Score=207.24  Aligned_cols=195  Identities=23%  Similarity=0.257  Sum_probs=150.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-CCCeEEEEccCCChhhHHhhcC---CccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   76 (229)
                      +++|||||+++||++++++|+++|++|++++|++++++++.. ..++..+.+|++|.++++++++   ++|++|||||..
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~   85 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   85 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccc
Confidence            368999999999999999999999999999998765433211 1367889999999999988876   489999999974


Q ss_pred             CC------CCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      ..      +.++|++.+++|+.+++++.+++.+.    ...+++|++||.....+.++.              ..|+.+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------------~~Y~asK  151 (242)
T d1cyda_          86 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL--------------ITYSSTK  151 (242)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB--------------HHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc--------------ccccchH
Confidence            22      34568889999999999999988664    234599999998766554433              3499999


Q ss_pred             H----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          147 A----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       147 ~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .    +++.++++++++||++|+|.||.+.+|.....   ..+... + ....+++|++.|+|++.++.||-
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~-~-~~~~pl~R~~~peeva~~v~fL~  221 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARK-L-KERHPLRKFAEVEDVVNSILFLL  221 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHH-H-HHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHH-H-HhcCCCCCCcCHHHHHHHHHHHh
Confidence            8    66777788888999999999999998753211   122222 1 22345688999999999888874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.96  E-value=5e-31  Score=208.60  Aligned_cols=194  Identities=21%  Similarity=0.195  Sum_probs=149.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC-CCCCCCCC-----CCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ||||||+++||++++++|+++|++|++.+++. +..+.+.+     ..++.++++|++|.++++++++       ++|++
T Consensus         4 ~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   83 (244)
T d1edoa_           4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVV   83 (244)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEE
T ss_pred             EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCcc
Confidence            69999999999999999999999999887643 22222111     1367889999999999877654       58999


Q ss_pred             EEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||...      .+.++|++.+++|+.+++++++++.+.+   +.++||++||..++.+.++.              .
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~--------------~  149 (244)
T d1edoa_          84 VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ--------------A  149 (244)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------------H
T ss_pred             ccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC--------------H
Confidence            99999742      2345788999999999999999998764   34699999998877554433              3


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      .|+.+|.    +++.++.+++++||++|+|.||.+.+|..........+.+. ...+++|++.|+|+++++.||-
T Consensus       150 ~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~-~~~pl~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKIL-GTIPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHH-TSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHH
Confidence            4999998    77778888888999999999999998864333322233232 2345788999999999988873

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=1.4e-28  Score=204.82  Aligned_cols=174  Identities=17%  Similarity=0.155  Sum_probs=140.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC--
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (229)
                      ||||||||+||||++|+++|+++|++|+++++........ .....++..+|+++.+.+.++++++|+|||+|+....  
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~   94 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG   94 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-hcccCcEEEeechhHHHHHHHhhcCCeEeeccccccccc
Confidence            8999999999999999999999999999998864332111 1125578899999999999999999999999976433  


Q ss_pred             -CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCc----cccccccCcHHHHHHHHHHHH
Q 027007           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV----HEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~----~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                       ....+...+..|+.++.++++++...+ ++++|++||..+|+.....+.++...    ..+..+.+.|+.+|.++|.++
T Consensus        95 ~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~  173 (363)
T d2c5aa1          95 FIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  173 (363)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence             235667889999999999999999985 78999999999998755444333321    112234567999999999999


Q ss_pred             HHHHhc-CCCeEEEecCceecCCC
Q 027007          154 LQAASE-GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       154 ~~~~~~-gi~~~~irpg~i~g~~~  176 (229)
                      +.+.+. |++++++||+.+|||.+
T Consensus       174 ~~~~~~~gl~~~ilR~~~vyG~~~  197 (363)
T d2c5aa1         174 KHYNKDFGIECRIGRFHNIYGPFG  197 (363)
T ss_dssp             HHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHhCCCEEEEEeeeEeccCC
Confidence            998754 99999999999999975

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.96  E-value=4.1e-31  Score=210.04  Aligned_cols=195  Identities=14%  Similarity=0.082  Sum_probs=147.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++.+|+.++++++..  ...+.++++|++|.++++++++       ++|++|||
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn   86 (254)
T d1hdca_           7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNN   86 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEec
Confidence            68999999999999999999999999999998755433211  1368899999999999877664       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      ||....      +.++|++.+++|+.+++++++++.+++   +.++||++||..++.+.++.              ..|+
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~--------------~~Y~  152 (254)
T d1hdca_          87 AGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------SSYG  152 (254)
T ss_dssp             CCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------------HHHH
T ss_pred             CccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch--------------hhHH
Confidence            997422      335688899999999999999998764   24699999998876554332              3499


Q ss_pred             HHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeeh-hhHhhhhhhHHHH
Q 027007          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIF-LLERMRHSCKFLT  211 (229)
Q Consensus       144 ~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~  211 (229)
                      .||.    +++.++.+++++||+|++|.||.+.+|............ .....+++|++ .|+|++.++.||-
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-~~~~~pl~R~g~~PedvA~~v~fL~  224 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG-NYPNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT-SCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH-HHhCCCCCCCCCCHHHHHHHHHHHh
Confidence            9998    677778888889999999999999887421100000000 11223456676 5899999888875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.96  E-value=2.1e-30  Score=206.35  Aligned_cols=197  Identities=22%  Similarity=0.228  Sum_probs=148.9

Q ss_pred             E-EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 K-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~-vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      | +|||||+++||++++++|+++|++|++.+|++++++++.     ....+..+++|++|+++++++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5 499999999999999999999999999999876543321     12467889999999999877654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||||....      +.++|++.+++|+.+++++++++.+++    ..++||++||..++.+.+..             
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-------------  148 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL-------------  148 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB-------------
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc-------------
Confidence            9999997322      345688999999999999999987642    23579999998776544432             


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHH----------HhhcccceeeeehhhHhhh
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAK----------LQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  204 (229)
                       ..|+.+|.    +++.++.+++++||++|+|.||.+.+|...........          .......+++|++.|+|++
T Consensus       149 -~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA  227 (255)
T d1gega_         149 -AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVA  227 (255)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             -ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHH
Confidence             34999998    77777888889999999999999988753211111100          0112234568899999999


Q ss_pred             hhhHHHHH
Q 027007          205 HSCKFLTW  212 (229)
Q Consensus       205 ~~~~~l~~  212 (229)
                      +++.||-.
T Consensus       228 ~~v~fL~S  235 (255)
T d1gega_         228 ACVSYLAS  235 (255)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhC
Confidence            98888753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.96  E-value=2.1e-30  Score=206.49  Aligned_cols=196  Identities=21%  Similarity=0.188  Sum_probs=149.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++.+|+.++++++..  ...+..+++|++|+++++++++       ++|++|||
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnn   86 (256)
T d1k2wa_           7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN   86 (256)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEee
Confidence            58999999999999999999999999999998655443211  2467889999999999877764       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ||....      +.++|++.+++|+.+++++++++.+.+    ..++||++||..+..+.+..              ..|
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------~~Y  152 (256)
T d1k2wa_          87 AALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV--------------GVY  152 (256)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC--------------HHH
T ss_pred             cccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc--------------cch
Confidence            997422      335688999999999999999876542    24699999998876554432              349


Q ss_pred             HHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHH----------HHHhhcccceeeeehhhHhhhhhhH
Q 027007          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV----------AKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      +.+|.    +++.++.+++++||+||+|.||.+-+|.........          .........+++|++.|+|++.++.
T Consensus       153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~  232 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAI  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99998    667777888889999999999999998632111100          0011122335688999999999988


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      ||-
T Consensus       233 fL~  235 (256)
T d1k2wa_         233 FLA  235 (256)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            863

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-28  Score=203.54  Aligned_cols=173  Identities=24%  Similarity=0.213  Sum_probs=138.6

Q ss_pred             CEE-EEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-----CCCCC------CCCeEEEEccCCChhhHHhhcC--Cc
Q 027007            1 MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPS------EGALELVYGDVTDYRSLVDACF--GC   66 (229)
Q Consensus         1 m~v-lItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~------~~~~~~~~~D~~~~~~~~~~~~--~~   66 (229)
                      .|| |||||+||||++|+++|+++|++|++++|..+..     +.+..      ...++++++|++|++.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            378 9999999999999999999999999999965421     11111      1468899999999999999886  47


Q ss_pred             cEEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      ++++|+++....  ...++..++++|+.+|.++++++.++..  ..++||+||+++||.....+.+|+.+..|   .+.|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P---~~~Y  157 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYP---RSPY  157 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC---CSHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCC---CCHH
Confidence            799999875321  2245566789999999999999988753  34899999999998766666666665543   5679


Q ss_pred             HHHHHHHHHHHHHHH-hcCCCeEEEecCceecCCC
Q 027007          143 ERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      +.||.++|.+++.+. .++++++++||+.+|||..
T Consensus       158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~  192 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR  192 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence            999999999999976 4589999999999999964

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.96  E-value=6e-30  Score=204.24  Aligned_cols=196  Identities=18%  Similarity=0.191  Sum_probs=149.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      ++|||||+++||+++++.|+++|++|++++|++++++++    . ....+..+++|++|.++++++++       .+|++
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   86 (260)
T d1zema1           7 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   86 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCee
Confidence            589999999999999999999999999999986543321    1 12468889999999998877664       58999


Q ss_pred             EEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      |||||....       +.++|++.+++|+.+++++++++.+.+   ..++||++||..++.+.++.              
T Consensus        87 VnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~--------------  152 (260)
T d1zema1          87 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM--------------  152 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------------
T ss_pred             hhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch--------------
Confidence            999996321       334688899999999999999998764   34599999998877554432              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc----------------hhHHHHHHhhcccceeeeehh
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT----------------TGNLVAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~----------------~~~~~~~~~~~~~~~~~~~~~  199 (229)
                      ..|+.+|.    +++.++.+++++||++|+|.||.+.+|....                ......+.+.. ..+++|++.
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pl~R~g~  231 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG-SVPMRRYGD  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH-TSTTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh-cCCCCCCcC
Confidence            34999998    6777778888899999999999999874211                11111122222 235688999


Q ss_pred             hHhhhhhhHHHHH
Q 027007          200 LERMRHSCKFLTW  212 (229)
Q Consensus       200 ~~~~~~~~~~l~~  212 (229)
                      |+|++.++.||-.
T Consensus       232 pedvA~~v~fL~S  244 (260)
T d1zema1         232 INEIPGVVAFLLG  244 (260)
T ss_dssp             GGGSHHHHHHHHS
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999888753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.96  E-value=3.4e-29  Score=200.72  Aligned_cols=198  Identities=17%  Similarity=0.232  Sum_probs=151.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC----CCCCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      .+|||||+++||++++++|+++|++|++++|+.+++++    +.....+.++++|++|+++++++++       ++|++|
T Consensus         8 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lV   87 (268)
T d2bgka1           8 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMF   87 (268)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceec
Confidence            58999999999999999999999999999998754332    2223467889999999999877764       589999


Q ss_pred             EeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||....        +.++|++.+++|+.+++++++++.+++   +.+++|++||..++....+.             .
T Consensus        88 nnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------------~  154 (268)
T d2bgka1          88 GNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------------S  154 (268)
T ss_dssp             ECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------------C
T ss_pred             cccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------------c
Confidence            99996321        123578889999999999999998765   23599999998765433211             1


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc----hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT----TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ..|+.+|.    +++.++.+++++||+||+|.||.+.+|....    ..............+.++++.|+|++.++.||-
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~  234 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA  234 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHh
Confidence            24999998    6777778888899999999999999986432    122223333333445678999999999988875


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       235 S  235 (268)
T d2bgka1         235 G  235 (268)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=3.2e-28  Score=201.54  Aligned_cols=176  Identities=22%  Similarity=0.243  Sum_probs=134.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC----CCCCC--CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----DISGL--PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~----~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||||||||||||++|+++|+++|++|.++.++..    ....+  ....+++++.+|++|.+.+.+++...|.|+|+|+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~   82 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence            79999999999999999999999987666655421    11111  1124789999999999999999999999999998


Q ss_pred             ccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCc----c-----cCCCCccccccccCcHH
Q 027007           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY----I-----ADENQVHEEKYFCTQYE  143 (229)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~-----~~~~~~~~~~~~~~~Y~  143 (229)
                      ....  +..++.+.+++|+.++.++++++....  .++|++||..+|+.....    .     .+......+..+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          83 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            6432  235678899999999999999998885  489999999999753210    0     00001111223357799


Q ss_pred             HHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCCc
Q 027007          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       144 ~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~~  178 (229)
                      .+|.++|.+++.+.+ .+++++++||+.+|||....
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~  196 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI  196 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc
Confidence            999999999999874 48999999999999997543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.96  E-value=3.9e-30  Score=205.18  Aligned_cols=194  Identities=18%  Similarity=0.142  Sum_probs=148.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC--------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~--------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++.+|++++++++.     ....+.++++|++|+++++++++        ++|+
T Consensus        10 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idi   89 (259)
T d2ae2a_          10 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   89 (259)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceE
Confidence            6899999999999999999999999999999876544321     12367889999999998866542        4899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      +|||||....      +.++|++.+++|+.+++++.+++.+.+   ..++||++||..+..+.++.              
T Consensus        90 lvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~--------------  155 (259)
T d2ae2a_          90 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--------------  155 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC--------------
T ss_pred             EEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc--------------
Confidence            9999997322      335788899999999999999988764   34599999998776544332              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch------hHHHHHHhhcccceeeeehhhHhhhhhhHH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLQWKKVDLVKDIFLLERMRHSCKF  209 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (229)
                      ..|+.+|.    +++.++++++++||+||+|.||.+.+|+....      .....+ + ....+++|++.|+|+++++.|
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~-~~~~pl~R~g~pedvA~~v~f  233 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNK-L-IDRCALRRMGEPKELAAMVAF  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHH-H-HHTSTTCSCBCHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHH-H-HhcCCCCCCcCHHHHHHHHHH
Confidence            34999998    66777778888899999999999998753111      111111 1 123456889999999998887


Q ss_pred             HH
Q 027007          210 LT  211 (229)
Q Consensus       210 l~  211 (229)
                      |-
T Consensus       234 L~  235 (259)
T d2ae2a_         234 LC  235 (259)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=2.8e-30  Score=205.88  Aligned_cols=193  Identities=16%  Similarity=0.120  Sum_probs=148.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEEE
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   70 (229)
                      +|||||+++||++++++|+++|++|++.+|+++++++..     ....+.++++|++|+++++++++       ++|++|
T Consensus         5 alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (257)
T d2rhca1           5 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLV   84 (257)
T ss_dssp             EEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            599999999999999999999999999999865443321     12368899999999999877654       589999


Q ss_pred             EeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC-----CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           71 HTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        71 ~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||...      .+.++|++.+++|+.+++++++++.+++     ..++||++||..++.+.++.              
T Consensus        85 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~--------------  150 (257)
T d2rhca1          85 NNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA--------------  150 (257)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC--------------
T ss_pred             ecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc--------------
Confidence            9999732      2345788999999999999999998753     23489999998776554433              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch------------hHHHHHHhhcccceeeeehhhHhh
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT------------GNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      ..|+.||+    +++.++++++++||+||+|.||.+.+|+....            .....+ + ....+++|++.|+|+
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~-~-~~~~PlgR~~~pedi  228 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR-I-TARVPIGRYVQPSEV  228 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHH-H-HTTSTTSSCBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHH-H-HhcCCCCCCcCHHHH
Confidence            34999998    66777777888899999999999988753111            111111 1 233457889999999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.||-
T Consensus       229 a~~v~fL~  236 (257)
T d2rhca1         229 AEMVAYLI  236 (257)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            98888764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=1.9e-29  Score=198.32  Aligned_cols=191  Identities=14%  Similarity=0.114  Sum_probs=147.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcCCccEEEEeCcccCC--
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVEP--   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi~~a~~~~~--   78 (229)
                      ++|||||+++||++++++|+++|++|++++|+++.+++.    ..+++.+|+++. +.+.+.+.++|++|||||....  
T Consensus         6 ~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~   81 (234)
T d1o5ia_           6 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGF   81 (234)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcc
Confidence            689999999999999999999999999999987554433    346788999873 4556667789999999996322  


Q ss_pred             ----CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----
Q 027007           79 ----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----  147 (229)
Q Consensus        79 ----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----  147 (229)
                          +.++|++.+++|+.+++++++++.+++   ..+++|+++|.....+.+..              ..|+.+|.    
T Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~--------------~~Y~asKaal~~  147 (234)
T d1o5ia_          82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL--------------YTSNSARMALTG  147 (234)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------------HHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc--------------ccchhHHHHHHH
Confidence                345688899999999999999997764   23589999998765544332              34999998    


Q ss_pred             HHHHHHHHHHhcCCCeEEEecCceecCCCCch-hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       148 ~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +++.++++++++||++|+|.||++.+|+.... .....+. ..+..+++|++.|+|++.++.||-
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~-~~~~~pl~R~~~pediA~~v~fL~  211 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ-VESQIPMRRMAKPEEIASVVAFLC  211 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHH-HHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            66788888889999999999999999864221 1122222 233456789999999999988774

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.96  E-value=3.3e-30  Score=205.83  Aligned_cols=196  Identities=16%  Similarity=0.149  Sum_probs=145.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-CCCCCC------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+++||++++++|+++|++|++++|+.. .++++.      ....+.++++|++|+++++++++       ++|
T Consensus         6 ~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1           6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            5899999999999999999999999999999742 222211      11367889999999999877764       589


Q ss_pred             EEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      ++|||||....      +.++|++.+++|+.+++++++++.+++.   .++||++||..+..+.++.             
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------------  152 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK-------------  152 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------------
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc-------------
Confidence            99999997422      3356889999999999999999987742   3599999999876554332             


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHH-----------HHHhhcccceeeeehhhHhh
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  203 (229)
                       ..|+.||.    +++.++++++++||+||+|+||++.+|+........           .........+++|++.|+|+
T Consensus       153 -~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi  231 (260)
T d1x1ta1         153 -SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL  231 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred             -chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence             34999998    667777888888999999999999998642211000           00111223356789999999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.||-
T Consensus       232 A~~v~fL~  239 (260)
T d1x1ta1         232 GGTAVFLA  239 (260)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=1.2e-29  Score=202.35  Aligned_cols=197  Identities=20%  Similarity=0.196  Sum_probs=149.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++.+|+.++ .+.    +. ....+..+++|++|+++++++++       ++|+
T Consensus         9 ~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_           9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999998542 221    11 12367889999999999877664       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---C-CceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||||....      +.++|++.+++|+.+++++++++.+++   + .++||++||..+..+.+..             
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~-------------  155 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF-------------  155 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC-------------
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc-------------
Confidence            9999997432      335788999999999999999987764   1 2359999998766544332             


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                       ..|+.+|.    +++.++.+++++||++|+|.||.+.+|....... ...........+++|++.|+|++.++.||-.
T Consensus       156 -~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S  233 (261)
T d1geea_         156 -VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS  233 (261)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             -cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence             34999998    6677788888899999999999999986422111 1111122334457889999999999888753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8.6e-28  Score=198.42  Aligned_cols=174  Identities=22%  Similarity=0.360  Sum_probs=139.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHh-hcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~~~~~   78 (229)
                      |||||||||||||++++++|+++| ++|+++++.......+....+++++++|+++.+++.+ +.+++|+|||+|+....
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            999999999999999999999999 5899999876555555455689999999999877655 66789999999997432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCc----cccccccCcHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV----HEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~----~~~~~~~~~Y~~sK~~~e~~  152 (229)
                        ...++.+.+++|+.++.++++++.+..  .+++++||+.+|+.......++...    .+...+...|+.+|.++|.+
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~  158 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cccccCCcccccccccccccccccccccc--ccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence              224566789999999999999998875  3778899999998765544443322    22233456799999999999


Q ss_pred             HHHHHh-cCCCeEEEecCceecCCC
Q 027007          153 ALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                      +..+.+ +|++++++||+.+|||..
T Consensus       159 ~~~~~~~~~~~~~i~r~~~~~g~~~  183 (342)
T d2blla1         159 IWAYGEKEGLQFTLFRPFNWMGPRL  183 (342)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSC
T ss_pred             hhhhhcccCceeEEeeccccccccc
Confidence            998875 499999999999999853

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1.8e-28  Score=202.63  Aligned_cols=172  Identities=24%  Similarity=0.360  Sum_probs=142.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-------CCC---CCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLP---SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-------~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      +|||||||||||++|+++|.++|++|++++|......       .+.   ....++++.+|+.|..........++.++|
T Consensus        18 ~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v~~   97 (341)
T d1sb8a_          18 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLH   97 (341)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccccccc
Confidence            7999999999999999999999999999997432110       000   114688999999999999988889999999


Q ss_pred             eCcccC--CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHH
Q 027007           72 TAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (229)
Q Consensus        72 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  149 (229)
                      +++...  .+..++...+++|+.|+.+|+++|...+ .+++||+||+.+|+..+..+.+|+.+..|   .+.|+.+|.++
T Consensus        98 ~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~  173 (341)
T d1sb8a_          98 QAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKP---LSPYAVTKYVN  173 (341)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCC---CSHHHHHHHHH
T ss_pred             ccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCC---CCcchHHHHHH
Confidence            997632  2345677899999999999999999885 68999999999999877666777766544   46799999999


Q ss_pred             HHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          150 DKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       150 e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      |.+++.+.+ .+++++++||+.+|||+..
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence            999998874 4899999999999999753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=6e-27  Score=191.51  Aligned_cols=173  Identities=23%  Similarity=0.203  Sum_probs=142.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-----CCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a   73 (229)
                      .+|||||||||||++++++|+++||+|++++|......     .+...++++++++|++|.+.+.+.+..  .++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            37999999999999999999999999999999754322     122335789999999999999887764  67888888


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      +....  ...++.+.++.|+.++.++++++......+++++.||...|+.......+|+.+..+   .+.|+.+|.++|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~  157 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYP---RSPYGVAKLYGHW  157 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccc---cChhHHHHHHHHH
Confidence            75322  335677889999999999999999987667899999998888776666666665543   4679999999999


Q ss_pred             HHHHHH-hcCCCeEEEecCceecCCC
Q 027007          152 IALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       152 ~~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      ++..+. .++++++++||+++|||..
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyGp~~  183 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHESPLR  183 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHhhcCCcEEEEEEecccCCCc
Confidence            999987 4589999999999999964

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.5e-28  Score=199.44  Aligned_cols=161  Identities=20%  Similarity=0.235  Sum_probs=130.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      +||||||||||||++|+++|+++|+.|+++++..               +.|++|.+.+.++++  .+|.|+|+|+....
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            4799999999999999999999999988775542               358999999988876  58999999976543


Q ss_pred             ---CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccc--cccccCcHHHHHHHHHHHH
Q 027007           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--EKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~~~e~~~  153 (229)
                         ...+..+.+++|+.+|.+++++|.+++ ++++||+||.++|+.....+.+|+.+..  +..+.+.|+.+|.++|.++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence               123456778999999999999999985 7899999999999986655555554332  2223456999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.+.+ +|++++++||+++|||++.
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCC
Confidence            99874 4999999999999999753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=1.5e-29  Score=201.06  Aligned_cols=196  Identities=21%  Similarity=0.239  Sum_probs=147.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++.+|++++++++..  .....++++|++|.++++++++       ++|++|||
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnn   87 (253)
T d1hxha_           8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNN   87 (253)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEec
Confidence            58999999999999999999999999999998655433221  1367889999999998876654       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||....      +.++|++.+++|+.+++++++++.++++  .++||++||..+..+.+..              ..|+.
T Consensus        88 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~--------------~~Y~a  153 (253)
T d1hxha_          88 AGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQY--------------AGYSA  153 (253)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTB--------------HHHHH
T ss_pred             ccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccc--------------ccccc
Confidence            997422      3356889999999999999999988753  3599999998876544332              34999


Q ss_pred             HHH----HHHHHHHHHHhc--CCCeEEEecCceecCCCCch--hHHHHHHhh--cccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKA----VADKIALQAASE--GLPIVPVYPGVIYGPGKLTT--GNLVAKLQW--KKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~--gi~~~~irpg~i~g~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +|.    +++.++++++++  +|++|+|.||.+.+|.....  .........  ....++++++.|+|+++++.||-
T Consensus       154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~  230 (253)
T d1hxha_         154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHh
Confidence            998    666777777764  59999999999988742110  000111111  12334567888999999988874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.95  E-value=5e-29  Score=198.55  Aligned_cols=194  Identities=18%  Similarity=0.153  Sum_probs=145.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEccCCChhhHHhhcC--------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF--------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~--------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+++++++..+     ...++++.+|+++.++++++++        .+|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idi   87 (258)
T d1ae1a_           8 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI   87 (258)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEE
Confidence            68999999999999999999999999999998754433211     1367889999999998866543        3799


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||||||....      +.++|++.+++|+.+++++.+++.+.+   ..+++|++||..+..+.+..              
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~--------------  153 (258)
T d1ae1a_          88 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--------------  153 (258)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC--------------
T ss_pred             EeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc--------------
Confidence            9999997432      335788999999999999999987654   34599999999876554433              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch-------hHHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT-------GNLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      ..|+.+|.    +++.++++++++||++++|+||.+.+|+....       ......+.  ...+++|.+.|+|++.++.
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~plgR~~~pediA~~v~  231 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI--VKTPMGRAGKPQEVSALIA  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH--HHSTTCSCBCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH--hcCCCCCCcCHHHHHHHHH
Confidence            34999998    66677777888899999999999999864221       11111111  2235678999999999888


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      ||-
T Consensus       232 fL~  234 (258)
T d1ae1a_         232 FLC  234 (258)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=4e-27  Score=198.01  Aligned_cols=176  Identities=20%  Similarity=0.213  Sum_probs=133.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc----------CCCCCCCCCC------------CCCeEEEEccCCChhh
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR----------RTSDISGLPS------------EGALELVYGDVTDYRS   58 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r----------~~~~~~~~~~------------~~~~~~~~~D~~~~~~   58 (229)
                      |||||||||||||++++++|+++||+|+++|.          ..........            ..+++++++|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            89999999999999999999999999999972          1111111111            1368999999999999


Q ss_pred             HHhhcC--CccEEEEeCcccCC--CC---CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCC--
Q 027007           59 LVDACF--GCHVIFHTAALVEP--WL---PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE--  129 (229)
Q Consensus        59 ~~~~~~--~~d~vi~~a~~~~~--~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~--  129 (229)
                      +.++++  ++|+|||+|+....  +.   ..+...+++|+.||.++++++.+....++++++||...|+....+..+.  
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~  161 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYI  161 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEE
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccccc
Confidence            999987  57999999986321  11   2244678999999999999999987666889999888887544222111  


Q ss_pred             ----CCc----cccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCC
Q 027007          130 ----NQV----HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       130 ----~~~----~~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~  176 (229)
                          ...    ..+..+.+.|+.+|.++|.+++.+.+ ++++++++||+.+|||..
T Consensus       162 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         162 TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCc
Confidence                100    11223456799999999999998874 599999999999999974

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.95  E-value=9.6e-29  Score=197.25  Aligned_cols=202  Identities=18%  Similarity=0.153  Sum_probs=149.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++.++...      ..++..+++|++|+++++++++       ++|+
T Consensus        11 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          11 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            58999999999999999999999999999999876443211      2367889999999999877664       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC----CCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +||||+....      +.++|++.+++|+.+++++.+++.+++    ..++++.++|............       ....
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~-------~~~~  163 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN-------GSLT  163 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT-------EECS
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc-------cCcc
Confidence            9999987322      335688899999999999999887653    2347777777654432211000       0011


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      ...|+.+|.    +++.++++++++||++|+|.||.+.+|.......-..+.... ..+++|++.|+|+++++.||-
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~-~~pl~R~g~pedvA~~v~fL~  239 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQAS-NIPLNRFAQPEEMTGQAILLL  239 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHH-TCTTSSCBCGGGGHHHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            245999998    667777888889999999999999998654333222222222 334688999999999988874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=1.1e-29  Score=201.94  Aligned_cols=193  Identities=15%  Similarity=0.120  Sum_probs=146.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-------CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~   74 (229)
                      ++|||||+++||++++++|+++|++|++.+|+.++.+++... ...+.++|+++.++++++++       ++|++|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            689999999999999999999999999999987654433211 12244678888877765543       6899999998


Q ss_pred             ccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ....       +.++|++.+++|+.+++++++++.+++   +.++||++||..++.+.+..              ..|+.
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~--------------~~Y~a  146 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL--------------STYTS  146 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC--------------HHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc--------------ccccc
Confidence            6321       224688899999999999999998764   23699999998876554432              34999


Q ss_pred             HHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---------hHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---------GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       145 sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                      +|.    +++.++++++++||+||+|+||.+.+++....         ......  ..+..+++|++.|+|+++++.||-
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~--~~~~~pl~R~g~pedvA~~v~fL~  224 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAH--VKKVTALQRLGTQKELGELVAFLA  224 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHH--HHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHH--HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            998    77777888889999999999999998864321         111111  123345788999999999988875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=7.4e-29  Score=198.32  Aligned_cols=197  Identities=16%  Similarity=0.184  Sum_probs=144.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      .+|||||+++||++++++|+++|++|++++|+.++++++.        ...++.++++|++|.++++++++       ++
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   86 (264)
T d1spxa_           7 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   86 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999876543221        11358899999999999877664       58


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccce-eeecCCCcccCCCCcc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFF-ALGSTDGYIADENQVH  133 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~-~~~~~~~~~~~~~~~~  133 (229)
                      |++|||||...+          +.++|++.+++|+.+++++++++.+++.  .+++|+++|.. ...+.+..        
T Consensus        87 DilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~--------  158 (264)
T d1spxa_          87 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--------  158 (264)
T ss_dssp             CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS--------
T ss_pred             CEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCc--------
Confidence            999999986311          2245888999999999999999988652  24777777754 33333222        


Q ss_pred             ccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-------HHHH-HHhhcccceeeeehhhH
Q 027007          134 EEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-------NLVA-KLQWKKVDLVKDIFLLE  201 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~  201 (229)
                            ..|+.+|.    +++.++++++++||+||+|.||.+.+|+.....       .+.. ........+++|++.|+
T Consensus       159 ------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  232 (264)
T d1spxa_         159 ------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ  232 (264)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH
T ss_pred             ------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH
Confidence                  34999998    677788888899999999999999998643211       0111 11112334578899999


Q ss_pred             hhhhhhHHHHH
Q 027007          202 RMRHSCKFLTW  212 (229)
Q Consensus       202 ~~~~~~~~l~~  212 (229)
                      |+++++.||-.
T Consensus       233 dvA~~v~fL~S  243 (264)
T d1spxa_         233 DIAEVIAFLAD  243 (264)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999888753

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.95  E-value=5.3e-29  Score=196.57  Aligned_cols=196  Identities=21%  Similarity=0.191  Sum_probs=145.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++++++..  ...+.++++|++++++++++++       ++|++|||
T Consensus         7 ~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinn   86 (241)
T d2a4ka1           7 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHF   86 (241)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccc
Confidence            68999999999999999999999999999998765432111  2367889999999999877654       58999999


Q ss_pred             CcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHH
Q 027007           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (229)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  146 (229)
                      |+....      +.++|++.+++|+.+++++.+++.+.+..++.++++|..+....++              ...|+.+|
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~--------------~~~Y~~sK  152 (241)
T d2a4ka1          87 AGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG--------------LAHYAAGK  152 (241)
T ss_dssp             GGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH--------------HHHHHHCS
T ss_pred             cccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccC--------------ccccchhh
Confidence            986322      3346888999999999999999998875554444444432221111              23499999


Q ss_pred             H----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          147 A----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       147 ~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                      +    +++.++++++++||++++|.||.+-+|..........+.... ..++++++.|+|++.++.||-.
T Consensus       153 ~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~-~~p~~r~~~p~dva~~v~fL~S  221 (241)
T d2a4ka1         153 LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG-ASPLGRAGRPEEVAQAALFLLS  221 (241)
T ss_dssp             SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH-TSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHh-CCCCCCCcCHHHHHHHHHHHhc
Confidence            8    566667777788999999999999988654332222222222 2457889999999999888753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.95  E-value=3.1e-29  Score=197.72  Aligned_cols=185  Identities=16%  Similarity=0.172  Sum_probs=143.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCe-------EEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC------
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHS-------VRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF------   64 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~-------V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~------   64 (229)
                      ||||||+++||++++++|+++|++       |++.+|+.++++++.     ....+.++++|++|.++++++++      
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY   83 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999987       889999876544321     12367889999999998877654      


Q ss_pred             -CccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                       ++|++|||||....      +.++|++.+++|+.+++++++++.+++   +.++||++||..++.+.++.         
T Consensus        84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~---------  154 (240)
T d2bd0a1          84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS---------  154 (240)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC---------
Confidence             58999999997422      345788999999999999999998875   23589999999877654432         


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                           ..|+.||.    +++.++.+++++||++++|.||.+.+|+......        ..  ..+...|+|++.+..|+
T Consensus       155 -----~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~--------~~--~~~~~~PedvA~~v~~l  219 (240)
T d2bd0a1         155 -----SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD--------EM--QALMMMPEDIAAPVVQA  219 (240)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS--------TT--GGGSBCHHHHHHHHHHH
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH--------hh--HhcCCCHHHHHHHHHHH
Confidence                 34999998    6777778888889999999999999997432211        01  12456788888877765


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       220 ~  220 (240)
T d2bd0a1         220 Y  220 (240)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=7.7e-29  Score=199.21  Aligned_cols=196  Identities=18%  Similarity=0.177  Sum_probs=147.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+++||++++++|+++|++|++.+|++++++++.        ...++..+.+|++|+++++++++       ++
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   85 (274)
T d1xhla_           6 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI   85 (274)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999865433211        11367899999999998877654       58


Q ss_pred             cEEEEeCccc--CC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           67 HVIFHTAALV--EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~--~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |++|||||..  ..      +.++|++.+++|+.+++++++++.+++   +.++++++||..+..+.++.          
T Consensus        86 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~----------  155 (274)
T d1xhla_          86 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY----------  155 (274)
T ss_dssp             CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS----------
T ss_pred             eEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC----------
Confidence            9999999863  11      223588899999999999999998764   23477877776655443332          


Q ss_pred             ccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc------hhHHHHHHhh--cccceeeeehhhHhh
Q 027007          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT------TGNLVAKLQW--KKVDLVKDIFLLERM  203 (229)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~  203 (229)
                          ..|+.+|.    +++.++.+++++||+||+|.||.+.+|....      ........+.  ....+++|++.|+|+
T Consensus       156 ----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi  231 (274)
T d1xhla_         156 ----PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI  231 (274)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred             ----ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence                34999998    6777788888999999999999999884211      1111122221  233467899999999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.||-
T Consensus       232 A~~v~fL~  239 (274)
T d1xhla_         232 ANIIVFLA  239 (274)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            99988875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-28  Score=193.71  Aligned_cols=195  Identities=17%  Similarity=0.096  Sum_probs=145.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-------CCCCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LPSEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++.++       .....++.++++|++|.++++++++       ++|
T Consensus         5 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (254)
T d2gdza1           5 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   84 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            58999999999999999999999999999998654221       1122468889999999999877664       589


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      ++||||+...  ..+|++.+++|+.+++++.+.+.+++.      .++||++||.+++.+.+..              ..
T Consensus        85 ilVnnAg~~~--~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~--------------~~  148 (254)
T d2gdza1          85 ILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ--------------PV  148 (254)
T ss_dssp             EEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC--------------HH
T ss_pred             eecccccccc--cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc--------------cc
Confidence            9999999754  367899999999999999999877642      2479999999876554432              34


Q ss_pred             HHHHHHHHHH------HHHHHHhcCCCeEEEecCceecCCCCchhH------HH-HHHhhcccceeeeehhhHhhhhhhH
Q 027007          142 YERSKAVADK------IALQAASEGLPIVPVYPGVIYGPGKLTTGN------LV-AKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       142 Y~~sK~~~e~------~~~~~~~~gi~~~~irpg~i~g~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      |+.||...+.      ++.+++++||+||+|+||.+.+|+......      .. .........++++++.|+|++.++.
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  228 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999984443      455778889999999999998875311110      00 0001112234567889999999988


Q ss_pred             HHHH
Q 027007          209 FLTW  212 (229)
Q Consensus       209 ~l~~  212 (229)
                      ||-.
T Consensus       229 fL~s  232 (254)
T d2gdza1         229 TLIE  232 (254)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            8754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=3.8e-29  Score=200.80  Aligned_cols=196  Identities=17%  Similarity=0.174  Sum_probs=145.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----C----CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P----SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      ++|||||+++||++++++|+++|++|++.+|++++++++    .    ....+..+++|++|+++++++++       ++
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   86 (272)
T d1xkqa_           7 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   86 (272)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            589999999999999999999999999999987543321    1    11368899999999999877664       58


Q ss_pred             cEEEEeCcccCC----------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccc-eeeecCCCcccCCCCcc
Q 027007           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSF-FALGSTDGYIADENQVH  133 (229)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~-~~~~~~~~~~~~~~~~~  133 (229)
                      |++|||||....          +.++|++.+++|+.+++++++++.+++.  .+++|+++|. ++..+.++.        
T Consensus        87 DilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~--------  158 (272)
T d1xkqa_          87 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF--------  158 (272)
T ss_dssp             CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS--------
T ss_pred             eEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc--------
Confidence            999999997422          1113778899999999999999988752  2466666664 444433332        


Q ss_pred             ccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCch---h---HHHHHH--hhcccceeeeehhhH
Q 027007          134 EEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---G---NLVAKL--QWKKVDLVKDIFLLE  201 (229)
Q Consensus       134 ~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~---~---~~~~~~--~~~~~~~~~~~~~~~  201 (229)
                            ..|+.+|+    +++.++++++++||+||+|.||.+.+|+....   .   ......  ......+++|++.|+
T Consensus       159 ------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe  232 (272)
T d1xkqa_         159 ------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  232 (272)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             ------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH
Confidence                  34999998    77788888889999999999999998853211   1   111111  123345678999999


Q ss_pred             hhhhhhHHHH
Q 027007          202 RMRHSCKFLT  211 (229)
Q Consensus       202 ~~~~~~~~l~  211 (229)
                      |++.++.||-
T Consensus       233 diA~~v~fL~  242 (272)
T d1xkqa_         233 HIANIILFLA  242 (272)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.95  E-value=3.2e-28  Score=195.74  Aligned_cols=194  Identities=19%  Similarity=0.213  Sum_probs=147.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      ++|||||+++||++++++|+++|++|++++|++++++++..  ...+..+.+|+++.++++++++       .+|++|||
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnn   86 (276)
T d1bdba_           7 AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPN   86 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccccccc
Confidence            58999999999999999999999999999998765443322  1367889999999998877654       58999999


Q ss_pred             CcccCC-------CCC----CchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCcccccccc
Q 027007           73 AALVEP-------WLP----DPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (229)
Q Consensus        73 a~~~~~-------~~~----~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
                      ||....       ..+    +|++.+++|+.+++++++++.+++.  .+++|+++|..+..+.++.              
T Consensus        87 AG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~--------------  152 (276)
T d1bdba_          87 AGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGG--------------  152 (276)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSC--------------
T ss_pred             ccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCC--------------
Confidence            996321       112    3788899999999999999987652  3589999998765443332              


Q ss_pred             CcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH----------HHHHHhhcccceeeeehhhHhhhh
Q 027007          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN----------LVAKLQWKKVDLVKDIFLLERMRH  205 (229)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  205 (229)
                      ..|+.+|+    +++.++.+++++ |+||+|+||.+.+|.......          ...+ ......+++|++.|+|++.
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~PlgR~g~peeva~  230 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLAD-MLKSVLPIGRMPEVEEYTG  230 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHH-HHTTTCTTSSCCCGGGGSH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHH-HHHhcCCCCCCcCHHHHHH
Confidence            34999998    666777777764 999999999999885422110          0111 2234456789999999999


Q ss_pred             hhHHHH
Q 027007          206 SCKFLT  211 (229)
Q Consensus       206 ~~~~l~  211 (229)
                      ++.||-
T Consensus       231 ~v~fL~  236 (276)
T d1bdba_         231 AYVFFA  236 (276)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            988874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=4.7e-28  Score=192.80  Aligned_cols=196  Identities=17%  Similarity=0.117  Sum_probs=142.1

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|  +||++++++|+++|++|++.+|+++..+..    ........+++|++|.++++++++       ++|+
T Consensus        10 ~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi   89 (256)
T d1ulua_          10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (256)
T ss_dssp             EEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceE
Confidence            589999987  899999999999999999998875322111    111356789999999999877654       5899


Q ss_pred             EEEeCcccC----------CCCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +||||+...          .+.++|+..+++|+.+++.+++++.+.++ .++||++||..+..+.++.            
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~------------  157 (256)
T d1ulua_          90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY------------  157 (256)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC------------
T ss_pred             EEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc------------
Confidence            999998621          12235777899999999999999988753 2489999998776544332            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        ..|+.+|.    +++.++++++++||+||+|+||.+.++......  ....+.. ....+++|++.|+|+++++.||-
T Consensus       158 --~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~-~~~~pl~R~~~pedvA~~v~fL~  234 (256)
T d1ulua_         158 --NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRV-AQTAPLRRNITQEEVGNLGLFLL  234 (256)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHH-HHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHH-HhcCCCCCCcCHHHHHHHHHHHh
Confidence              34999998    667777888889999999999999998653322  1112222 22335688999999999988875


Q ss_pred             H
Q 027007          212 W  212 (229)
Q Consensus       212 ~  212 (229)
                      .
T Consensus       235 S  235 (256)
T d1ulua_         235 S  235 (256)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=2.4e-27  Score=196.33  Aligned_cols=170  Identities=16%  Similarity=0.206  Sum_probs=134.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCC-----CCCCeEEEEccCCChhhHHhhcC--CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   73 (229)
                      .|||||||||||++|+++|+++|++|+++++.... .+...     ...+++++++|++|.+++.++++  ++|+|||+|
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            48999999999999999999999999999864321 11100     11368899999999999998876  799999999


Q ss_pred             cccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcc----cCCCCccccccccCcHHHHHH
Q 027007           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI----ADENQVHEEKYFCTQYERSKA  147 (229)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~----~~~~~~~~~~~~~~~Y~~sK~  147 (229)
                      +....  ..+++..+..+|+.++.+++++|++.+ ++++|++||..+|+.....+    .+|+.+.   .+.+.|+.+|.
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~---~p~~~Y~~sK~  158 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL---GPTNPYGHTKY  158 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC---CCCSHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCC---CCCChhHhHHH
Confidence            97432  234567789999999999999999885 78999999999998654322    3333322   23467999999


Q ss_pred             HHHHHHHHHHh---cCCCeEEEecCceecCC
Q 027007          148 VADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       148 ~~e~~~~~~~~---~gi~~~~irpg~i~g~~  175 (229)
                      ++|.+++++.+   .+++++++||+.+||+.
T Consensus       159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         159 AIENILNDLYNSDKKSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHhhccCCcEEEEeecceEeec
Confidence            99999998853   47899999999999974

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.1e-28  Score=195.45  Aligned_cols=196  Identities=15%  Similarity=0.114  Sum_probs=144.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC--------C--CCCCCeEEEEccCCChhhHHhhcC-------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------L--PSEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--------~--~~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++++.        .  ....++..+++|++|++++.++++       
T Consensus        14 valITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   93 (297)
T d1yxma1          14 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFG   93 (297)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999998654221        1  112468889999999999877654       


Q ss_pred             CccEEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcCC---CceEEEEccceeeecCCCcccCCCCcccc
Q 027007           65 GCHVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        65 ~~d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      ++|++||||+...      .+.++|++.+++|+.+++++++++.+.+.   .+++|++||... ...+.           
T Consensus        94 ~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~-----------  161 (297)
T d1yxma1          94 KINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPL-----------  161 (297)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTT-----------
T ss_pred             CeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccc-----------
Confidence            5899999998632      23357888999999999999999987752   247888766432 22221           


Q ss_pred             ccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh-HHHHHHhh--cccceeeeehhhHhhhhhhH
Q 027007          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG-NLVAKLQW--KKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  208 (229)
                         ...|+.+|.    +++.++++++++||+||+|.||.+.+|...... ........  ....+++|++.|+|+++++.
T Consensus       162 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~  238 (297)
T d1yxma1         162 ---AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC  238 (297)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHH
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               245999998    666777777788999999999999998642211 11111111  12235688999999999988


Q ss_pred             HHHH
Q 027007          209 FLTW  212 (229)
Q Consensus       209 ~l~~  212 (229)
                      ||-.
T Consensus       239 fL~S  242 (297)
T d1yxma1         239 FLLS  242 (297)
T ss_dssp             HHHS
T ss_pred             HHhC
Confidence            8764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-27  Score=189.49  Aligned_cols=196  Identities=19%  Similarity=0.179  Sum_probs=150.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc---CCccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~d~vi~~a~~~~~   78 (229)
                      ++|||||+++||+++++.|+++|++|++.+|++++++++.+...++...+|+.+.+.++...   ..+|++|||||....
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~   87 (245)
T d2ag5a1           8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHH   87 (245)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccccCC
Confidence            58999999999999999999999999999999877776666567888899998877665544   468999999997432


Q ss_pred             ------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceee-ecCCCcccCCCCccccccccCcHHHHHH-
Q 027007           79 ------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCTQYERSKA-  147 (229)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~-  147 (229)
                            +.++|++.+++|+.+++.+.+++.+.+   ..++||++||..+. .+...              ...|+.+|+ 
T Consensus        88 ~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~--------------~~~Y~~sKaa  153 (245)
T d2ag5a1          88 GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN--------------RCVYSTTKAA  153 (245)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT--------------BHHHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccc--------------hhHHHHHHHH
Confidence                  335688899999999999999988753   34599999987542 11111              245999999 


Q ss_pred             ---HHHHHHHHHHhcCCCeEEEecCceecCCCCch------hHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          148 ---VADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       148 ---~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                         +++.++++++++||++|+|.||.+.+|+....      .....+ ......+++|++.|+|++.++.||-.
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~~pl~R~~~pedva~~v~fL~s  226 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARN-DFLKRQKTGRFATAEEIAMLCVYLAS  226 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHH-HHHHTCTTSSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHH-HHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence               66777788888999999999999999863211      111111 12233457889999999999888643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.5e-25  Score=184.38  Aligned_cols=172  Identities=23%  Similarity=0.193  Sum_probs=133.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC-----CCCCCCC------CCCeEEEEccCCChhhHHhhcC--CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-----DISGLPS------EGALELVYGDVTDYRSLVDACF--GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~-----~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~--~~d~   68 (229)
                      ++||||||||||++|+++|+++||+|++++|..+     +...+..      ...++++.+|+++.+.+.+.++  ++|+
T Consensus         3 ~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~   82 (339)
T d1n7ha_           3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDE   82 (339)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccch
Confidence            6899999999999999999999999999999643     2222211      1367899999999999988875  5799


Q ss_pred             EEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCccccccccCcH
Q 027007           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (229)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y  142 (229)
                      |||+|+....  ..+++...++.|+.++.+++++++..    ....++++.||...++.... ..+|+.+..|   .+.|
T Consensus        83 Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~-~~~E~~~~~p---~~~Y  158 (339)
T d1n7ha_          83 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP---RSPY  158 (339)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC---CSHH
T ss_pred             hhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC-CCCCCCCCCC---cchh
Confidence            9999987432  22467788999999999999988653    12347788888777765543 3445444432   5779


Q ss_pred             HHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          143 ERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       143 ~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +.+|.++|.++..+.+ ++++++++||+++|||...
T Consensus       159 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         159 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  194 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence            9999999999999875 4999999999999999753

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-27  Score=190.22  Aligned_cols=197  Identities=19%  Similarity=0.195  Sum_probs=142.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   67 (229)
                      .+|||||+++||+++++.|+++|++|++.+|++++++++.       ....+.++++|++++++++++++       ++|
T Consensus        12 v~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD   91 (257)
T d1xg5a_          12 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD   91 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            4899999999999999999999999999999876544321       12367889999999998877654       589


Q ss_pred             EEEEeCcccC------CCCCCchhhhHhhHHHHHHHHHHHHhcC-----CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           68 VIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        68 ~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ++|||||...      .+.++|++.+++|+.+++++.+.+.+.+     ..++||++||.+++...+...          
T Consensus        92 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~----------  161 (257)
T d1xg5a_          92 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV----------  161 (257)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG----------
T ss_pred             EEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc----------
Confidence            9999999732      2334688899999999999998886542     236999999987654322111          


Q ss_pred             cccCcHHHHHH----HHHHHHHHH--HhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKA----VADKIALQA--ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~--~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.+|.    +++.+++++  +++||++++|.||.+-++..........+.. ....+..+++.|+|+++++.||
T Consensus       162 --~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~-~~~~~~~r~~~pedvA~~v~fL  238 (257)
T d1xg5a_         162 --THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA-AATYEQMKCLKPEDVAEAVIYV  238 (257)
T ss_dssp             --GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH-HHHHC---CBCHHHHHHHHHHH
T ss_pred             --cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHH-HhcCCCCCCcCHHHHHHHHHHH
Confidence              234999998    555666666  4679999999999998774311111111111 1223467888999999998887


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       239 ~  239 (257)
T d1xg5a_         239 L  239 (257)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.94  E-value=5.5e-26  Score=190.42  Aligned_cols=176  Identities=24%  Similarity=0.302  Sum_probs=132.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCC---CCCC-------------------CCCCCCCeEEEEccCCChh
Q 027007            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRT---SDIS-------------------GLPSEGALELVYGDVTDYR   57 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~---~~~~-------------------~~~~~~~~~~~~~D~~~~~   57 (229)
                      |||||||||||||++|+++|++ .|++|+++|+-.   ....                   .......+.++++|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            9999999999999999999986 689999998511   0000                   0011136789999999999


Q ss_pred             hHHhhcC---CccEEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCccc-CCCC
Q 027007           58 SLVDACF---GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIA-DENQ  131 (229)
Q Consensus        58 ~~~~~~~---~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-~~~~  131 (229)
                      .+.++++   ++|+|||+|+....  ...+....+++|+.++.++++++...+ .++++++||...|+....... ++..
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccccc
Confidence            9988875   57999999986432  223456778999999999999999885 679999999888875432211 1111


Q ss_pred             c---cccccccCcHHHHHHHHHHHHHHHHh-cCCCeEEEecCceecCCCC
Q 027007          132 V---HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       132 ~---~~~~~~~~~Y~~sK~~~e~~~~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      +   ..+..+.+.|+.+|..+|.+++++.+ +|++++++||+.+|||+..
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence            1   11223457799999999999999874 5999999999999999764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-25  Score=183.58  Aligned_cols=172  Identities=20%  Similarity=0.242  Sum_probs=134.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC------------CCCCeEEEEccCCChhhHHhhcC--Ccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------------SEGALELVYGDVTDYRSLVDACF--GCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~--~~d   67 (229)
                      ||||||||||||++|+++|+++|++|+++++.........            ...++.++++|++|.+.+.+++.  +++
T Consensus         4 KILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~   83 (346)
T d1ek6a_           4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM   83 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccc
Confidence            6999999999999999999999999999987432211100            12478999999999999988876  467


Q ss_pred             EEEEeCcccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHH
Q 027007           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (229)
Q Consensus        68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  145 (229)
                      +++|+|+....  +..++.+.+++|+.++.++++++...+ +++++++||..+|+.......++...  ...+.++|+.+
T Consensus        84 ~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~  160 (346)
T d1ek6a_          84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPYGKS  160 (346)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSC--CCCCSSHHHHH
T ss_pred             cccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeecccccccccccc--ccccCChHHHH
Confidence            89999987432  234677889999999999999999885 78999999999998755333222221  12234679999


Q ss_pred             HHHHHHHHHHHHh--cCCCeEEEecCceecCCC
Q 027007          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       146 K~~~e~~~~~~~~--~gi~~~~irpg~i~g~~~  176 (229)
                      |..+|..++++.+  .+++.+++||+.+|||..
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~  193 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHA  193 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCC
Confidence            9999999988754  489999999999999853

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.93  E-value=2.2e-26  Score=190.22  Aligned_cols=174  Identities=23%  Similarity=0.257  Sum_probs=132.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +||||||+||||++++++|+++|++|+++.|+.++...+       ........+.+|++|.+++.+++.++|+|+|+++
T Consensus        13 ~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~   92 (342)
T d1y1pa1          13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIAS   92 (342)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhcc
Confidence            799999999999999999999999999999975432211       1112345577999999999999999999999998


Q ss_pred             ccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeec-CC---CcccCCCCc-------------ccccc
Q 027007           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS-TD---GYIADENQV-------------HEEKY  137 (229)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~-~~---~~~~~~~~~-------------~~~~~  137 (229)
                      .... ..++...++.|+.+|.+++++|.+....+++|++||+.+... .+   ....+|..+             ..+..
T Consensus        93 ~~~~-~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          93 VVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             cccc-cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            7543 345677889999999999999999766789999999754432 11   222222211             11222


Q ss_pred             ccCcHHHHHHHHHHHHHHHHhc---CCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~~~---gi~~~~irpg~i~g~~~  176 (229)
                      +.+.|+.+|..+|.+++.+.+.   ++++++++|+.+|||..
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~  213 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCC
Confidence            3456999999999999888642   57789999999999853

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.93  E-value=5.3e-27  Score=186.97  Aligned_cols=195  Identities=18%  Similarity=0.145  Sum_probs=142.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++.+++.++ .+.    +. ....+..+++|++|.++++++++       .+|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_           8 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            58999999999999999999999999988775432 121    11 11367889999999999877664       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEcccee-eecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      +|||||....      +.++|++.+++|+.+++++++.+.++++. +++++++|..+ ..+.+..              .
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~--------------~  153 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH--------------A  153 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC--------------H
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc--------------h
Confidence            9999997422      33468889999999999999999987632 36777766543 3222222              3


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCC-------------chhHHHHHHhhcccceeeeehhhHhh
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKL-------------TTGNLVAKLQWKKVDLVKDIFLLERM  203 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (229)
                      .|+.+|.    +++.++++++++||++|+|+||++.+|...             .......+.+ ....+++|++.|+|+
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pl~R~g~p~eV  232 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL-ANMNPLKRIGYPADI  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH-HHTSTTSSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHH-HhCCCCCCCcCHHHH
Confidence            4999997    667777788888999999999999876310             0111122222 233456789999999


Q ss_pred             hhhhHHHH
Q 027007          204 RHSCKFLT  211 (229)
Q Consensus       204 ~~~~~~l~  211 (229)
                      +.++.||-
T Consensus       233 a~~v~fL~  240 (259)
T d1ja9a_         233 GRAVSALC  240 (259)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-26  Score=182.78  Aligned_cols=196  Identities=21%  Similarity=0.191  Sum_probs=143.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC-------CccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~   72 (229)
                      .+|||||+++||++++++|+++|++|++++|+.++++.+..  .........|+.+.+++++...       ..|.++++
T Consensus         7 valITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (248)
T d2o23a1           7 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC   86 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccc
Confidence            57999999999999999999999999999998776543221  1367788899999877655443       47888888


Q ss_pred             CcccCC------------CCCCchhhhHhhHHHHHHHHHHHHhcC---------CCceEEEEccceeeecCCCcccCCCC
Q 027007           73 AALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQ  131 (229)
Q Consensus        73 a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~iv~~sS~~~~~~~~~~~~~~~~  131 (229)
                      ++....            +.++|++.+++|+.+++++.+++.+++         ..++||++||..++.+.++.      
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~------  160 (248)
T d2o23a1          87 AGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ------  160 (248)
T ss_dssp             CCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC------
T ss_pred             cccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc------
Confidence            764211            123577889999999999999997652         12489999999877654433      


Q ss_pred             ccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhh
Q 027007          132 VHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSC  207 (229)
Q Consensus       132 ~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (229)
                              ..|+.+|.    +++.++++++++||++|+|.||.+.+++......-....+....+..+|++.|+|++.++
T Consensus       161 --------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         161 --------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence                    34999998    667777888889999999999999998754333222233334444447899999999988


Q ss_pred             HHHH
Q 027007          208 KFLT  211 (229)
Q Consensus       208 ~~l~  211 (229)
                      .||.
T Consensus       233 ~fL~  236 (248)
T d2o23a1         233 QAII  236 (248)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8774

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.93  E-value=1.9e-26  Score=184.98  Aligned_cols=196  Identities=17%  Similarity=0.172  Sum_probs=145.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCC----C-CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++ ++.    + .....+.++++|++|++++.++++       .+|+
T Consensus        20 ~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          20 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            68999999999999999999999999999987532 111    1 112468889999999998877654       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeec-CCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGS-TDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~-~~~~~~~~~~~~~~~~~~~  140 (229)
                      +||+++....      ..++|++.+++|+.+++.+++++.+++.. +++++++|..+... ...              ..
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~--------------~~  165 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK--------------HA  165 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS--------------CH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc--------------hh
Confidence            9999987322      33467888999999999999999988643 48888887654321 211              24


Q ss_pred             cHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC------------CchhHHHHHHhhcccceeeeehhhHhhh
Q 027007          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK------------LTTGNLVAKLQWKKVDLVKDIFLLERMR  204 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (229)
                      .|+.+|+    +++.++++++++||+||+|+||.+.+|..            ........+.......+++|++.|+|++
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA  245 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHH
Confidence            4999998    66777788888999999999999987641            0111112222233445568999999999


Q ss_pred             hhhHHHH
Q 027007          205 HSCKFLT  211 (229)
Q Consensus       205 ~~~~~l~  211 (229)
                      .++.||-
T Consensus       246 ~~v~fL~  252 (272)
T d1g0oa_         246 RVVCFLA  252 (272)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.5e-26  Score=185.74  Aligned_cols=185  Identities=16%  Similarity=0.089  Sum_probs=139.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-----------CCeEEEEccCCChhhHHhhc-------
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----------GALELVYGDVTDYRSLVDAC-------   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~-------   63 (229)
                      ++|||||+++||++++++|+++|++|++.+|+.+........           .......+|++|.+++++++       
T Consensus         9 valITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~   88 (302)
T d1gz6a_           9 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTF   88 (302)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999876533221110           12345678888887765544       


Q ss_pred             CCccEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccc
Q 027007           64 FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  134 (229)
                      .++|++|||||....      +.++|++.+++|+.+++++++++.+++   +.++||++||..+..+.++.         
T Consensus        89 G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~---------  159 (302)
T d1gz6a_          89 GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ---------  159 (302)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc---------
Confidence            368999999997422      335788999999999999999998875   23599999998876554432         


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                           ..|+.||.    +++.++.+++++||++|+|.||.+.++.......           ...+...|+|++.++.||
T Consensus       160 -----~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~-----------~~~~~~~PedvA~~v~fL  223 (302)
T d1gz6a_         160 -----ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE-----------DLVEALKPEYVAPLVLWL  223 (302)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH-----------HHHHHSCGGGTHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH-----------hhHhcCCHHHHHHHHHHH
Confidence                 34999998    6777778888899999999999886654322211           122345789999888876


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       224 ~  224 (302)
T d1gz6a_         224 C  224 (302)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.93  E-value=1.5e-24  Score=179.39  Aligned_cols=179  Identities=20%  Similarity=0.316  Sum_probs=136.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~   74 (229)
                      +||||||||||||++++++|+++|++|++++|+......+    .....++++.+|++|++.+.++++  .+|+|+|+|+
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa   88 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   88 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhc
Confidence            5899999999999999999999999999999987654431    112478999999999999988876  5799999998


Q ss_pred             ccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCC-CcccCCCCccccccccCcHHHHHHHHHH
Q 027007           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADK  151 (229)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  151 (229)
                      ....  +..++...+++|+.++.++++++........+++.||...+.... ....++..+..   +.+.|+.+|...|.
T Consensus        89 ~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---p~~~y~~~k~~~e~  165 (356)
T d1rkxa_          89 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG---GYDPYSNSKGCAEL  165 (356)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC---CSSHHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccC---CCCccccccccchh
Confidence            6432  234677889999999999999999876556777777766555433 22333333322   24679999998887


Q ss_pred             HHHHHH----------hcCCCeEEEecCceecCCCCchhHH
Q 027007          152 IALQAA----------SEGLPIVPVYPGVIYGPGKLTTGNL  182 (229)
Q Consensus       152 ~~~~~~----------~~gi~~~~irpg~i~g~~~~~~~~~  182 (229)
                      .+..+.          .+++.++++||+.+|||++.....+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~  206 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRI  206 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCH
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHH
Confidence            776543          3478899999999999987544333

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.93  E-value=1.2e-25  Score=178.53  Aligned_cols=158  Identities=19%  Similarity=0.210  Sum_probs=128.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------CCCCCeEEEEccCC-ChhhHHhhc-------CCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVT-DYRSLVDAC-------FGCH   67 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~D~~-~~~~~~~~~-------~~~d   67 (229)
                      +||||||+++||++++++|+++|++|++++|+.++.+.+      ....++.++.+|++ +.+++++++       .++|
T Consensus         7 ~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1           7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999887653322      22247888999998 445565544       3689


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCC------CceEEEEccceeeecCCCcccCCCCccccccccCc
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (229)
                      +||||||..+  .++|++.+++|+.+++++.+++.+.+.      .++||++||..++.+.++.              ..
T Consensus        87 ilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~--------------~~  150 (254)
T d1sbya1          87 ILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------------PV  150 (254)
T ss_dssp             EEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------------HH
T ss_pred             EEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC--------------HH
Confidence            9999999653  478999999999999999999987642      2479999999887654433              34


Q ss_pred             HHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          142 YERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      |+.||.    +++.++.++.++||+|+.|.||++.+|.
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence            999998    7777788888889999999999999974

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7e-26  Score=182.74  Aligned_cols=160  Identities=21%  Similarity=0.136  Sum_probs=123.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEc---CCCCCCC-------C-CCCCCeEEEEccCCChhhHHhhcC-----Cc
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISG-------L-PSEGALELVYGDVTDYRSLVDACF-----GC   66 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r---~~~~~~~-------~-~~~~~~~~~~~D~~~~~~~~~~~~-----~~   66 (229)
                      ||||||+++||++++++|+++|++|+.+.+   +.+..+.       + .....+..+++|++|.+++.++++     .+
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            589999999999999999999988665544   3222111       1 122478899999999999987764     48


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCcccccc
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      |+++|||+....      +.++|++.+++|+.|+.++++++.+++   +.++||++||..+..+.+..            
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~------------  152 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN------------  152 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC------------
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc------------
Confidence            999999987322      335688899999999999999998865   23699999999876554332            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                        ..|+.||.    +++.++.+++++||++++|+||++.++..
T Consensus       153 --~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~  193 (285)
T d1jtva_         153 --DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (285)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHH
Confidence              44999998    67777888888999999999999999864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=5.1e-26  Score=180.10  Aligned_cols=165  Identities=18%  Similarity=0.178  Sum_probs=127.3

Q ss_pred             CE-EEEEcCCChHHHHHHHHHH---HCCCeEEEEEcCCCCCCCCC----CCCCeEEEEccCCChhhHHhhcC--------
Q 027007            1 MK-ILVSGASGYLGGRLCHALL---KQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF--------   64 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~---~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~--------   64 (229)
                      || ||||||+++||++++++|+   ++|++|++.+|++++++++.    ...++.++.+|++|+++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            64 9999999999999999996   47899999999987765432    12578999999999998866543        


Q ss_pred             -CccEEEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcC--------------CCceEEEEccceeeecC
Q 027007           65 -GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--------------TVEKIIYTSSFFALGST  122 (229)
Q Consensus        65 -~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~iv~~sS~~~~~~~  122 (229)
                       ++|++|||||....       ..+++++.+++|+.+++.+++++.+.+              ..+++|++||..+.-..
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence             48999999997322       122477789999999999999987653              13589999998654321


Q ss_pred             CCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          123 DGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ...+           ....|+.||+    +++.++.++.++||++++|+||++.+++.
T Consensus       162 ~~~~-----------~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         162 NTDG-----------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             CCSC-----------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             CCCC-----------ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence            1100           1235999998    66677777878899999999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.7e-27  Score=184.51  Aligned_cols=161  Identities=14%  Similarity=0.085  Sum_probs=128.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------CccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   69 (229)
                      .+|||||+++||++++++|+++|++|++.+|+.++++++.     ...++..+.+|++|++++.++++       ++|++
T Consensus         9 v~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idil   88 (244)
T d1yb1a_           9 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL   88 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCcee
Confidence            5899999999999999999999999999999876544321     12468899999999999877654       58999


Q ss_pred             EEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |||||....      ..++|++.+++|+.++.++++++.+.+   +.++||++||..+..+.++.              .
T Consensus        89 innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~--------------~  154 (244)
T d1yb1a_          89 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL--------------L  154 (244)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHH--------------H
T ss_pred             EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCc--------------H
Confidence            999997432      123577899999999999999998764   24589999999877554332              3


Q ss_pred             cHHHHHH----HHHHHHHHHHh---cCCCeEEEecCceecCCC
Q 027007          141 QYERSKA----VADKIALQAAS---EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~---~gi~~~~irpg~i~g~~~  176 (229)
                      .|+.||+    +++.++.++++   +||++++|.||.+.++..
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~  197 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  197 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh
Confidence            4999999    56666667665   479999999999999864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.4e-24  Score=164.80  Aligned_cols=154  Identities=23%  Similarity=0.231  Sum_probs=123.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (229)
                      ||+||||||+||++++++|+++|++|++++|++++.+.... .+++++++|++|.+++.++++++|+|||++|.....  
T Consensus         5 kIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~--   81 (205)
T d1hdoa_           5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL--   81 (205)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC--
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccCCch--
Confidence            79999999999999999999999999999999877665433 378999999999999999999999999999864321  


Q ss_pred             CchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHhcCC
Q 027007           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGL  161 (229)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~gi  161 (229)
                         ...+++..++.++++++++++ .+|+|++||..++......+.          ....|...|..+|.+.+   ..++
T Consensus        82 ---~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~----------~~~~~~~~~~~~e~~l~---~~~~  144 (205)
T d1hdoa_          82 ---SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLR---ESGL  144 (205)
T ss_dssp             ---SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCG----------GGHHHHHHHHHHHHHHH---HTCS
T ss_pred             ---hhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccccc----------cccccchHHHHHHHHHH---hcCC
Confidence               223567889999999999885 789999999877654322111          11247777877777654   3689


Q ss_pred             CeEEEecCceecCC
Q 027007          162 PIVPVYPGVIYGPG  175 (229)
Q Consensus       162 ~~~~irpg~i~g~~  175 (229)
                      ++++|||+.+++..
T Consensus       145 ~~tiirp~~~~~~~  158 (205)
T d1hdoa_         145 KYVAVMPPHIGDQP  158 (205)
T ss_dssp             EEEEECCSEEECCC
T ss_pred             ceEEEecceecCCC
Confidence            99999999998753

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.92  E-value=1.6e-25  Score=181.48  Aligned_cols=194  Identities=14%  Similarity=0.128  Sum_probs=140.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++.++...      ...+..+++|+++.++++++++       ++|+
T Consensus        27 ~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          27 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            58999999999999999999999999999998654332111      1367889999999999876553       5899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhc----CCCceEEEEccceeeecCCCcccCCCCccccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  138 (229)
                      +|||||....      ...++.+.+.+|+.+...+...+...    .....++.++|..+....+..             
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------------  173 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------------  173 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------------
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------------
Confidence            9999997322      22356677899999988887765432    223477888777655444332             


Q ss_pred             cCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc----hhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT----TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                       ..|+.+|.    +++.++++++++||+||+|+||.+.+|....    ......  ......++++.+.|+|++.++.||
T Consensus       174 -~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~~~~~~pl~R~~~pediA~~v~fL  250 (294)
T d1w6ua_         174 -VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK--EMIGRIPCGRLGTVEELANLAAFL  250 (294)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHH--HHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHH--HHhhcCCCCCCCCHHHHHHHHHHH
Confidence             34999998    6667777888889999999999999986422    112222  222334578899999999988876


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       251 ~  251 (294)
T d1w6ua_         251 C  251 (294)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.1e-25  Score=179.24  Aligned_cols=194  Identities=16%  Similarity=0.148  Sum_probs=139.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcC-------
Q 027007            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~-------   64 (229)
                      .++||||+++||++++++|++   +|++|++++|+.++++++.       ...++.++++|++|++++.++++       
T Consensus         8 valITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~   87 (259)
T d1oaaa_           8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhh
Confidence            369999999999999999986   7999999999876544321       12367889999999999877652       


Q ss_pred             ----CccEEEEeCcccCC---------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-----ceEEEEccceeeecCCCcc
Q 027007           65 ----GCHVIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-----EKIIYTSSFFALGSTDGYI  126 (229)
Q Consensus        65 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~iv~~sS~~~~~~~~~~~  126 (229)
                          ..|++|||||....         +.++|++.+++|+.+++++++++.+++..     ++||++||..++.+.++. 
T Consensus        88 ~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~-  166 (259)
T d1oaaa_          88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGW-  166 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTC-
T ss_pred             hccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccc-
Confidence                36799999986321         11357788999999999999999988632     489999998776554432 


Q ss_pred             cCCCCccccccccCcHHHHHHHHHHHHHHHH--hcCCCeEEEecCceecCCCCchh-----HHHHHHhhcccceeeeehh
Q 027007          127 ADENQVHEEKYFCTQYERSKAVADKIALQAA--SEGLPIVPVYPGVIYGPGKLTTG-----NLVAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       127 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~~gi~~~~irpg~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~  199 (229)
                                   ..|+.||...+.+.+.++  .+||++++|+||.+.+++.....     ....+.+ ....+.++.+.
T Consensus       167 -------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~  232 (259)
T d1oaaa_         167 -------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL-QKLKSDGALVD  232 (259)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH-HHHHHTTCSBC
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHH-HhcCCCCCCCC
Confidence                         349999996666655554  45899999999999988532110     0011111 12223456677


Q ss_pred             hHhhhhhhHHH
Q 027007          200 LERMRHSCKFL  210 (229)
Q Consensus       200 ~~~~~~~~~~l  210 (229)
                      |++++..+.|+
T Consensus       233 p~evA~~i~~l  243 (259)
T d1oaaa_         233 CGTSAQKLLGL  243 (259)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88877665554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.5e-24  Score=167.13  Aligned_cols=155  Identities=19%  Similarity=0.149  Sum_probs=125.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      ++|||||||||||++++++|+++|.  +|++++|++.+..... ...+....+|+.+.+++.++++++|++||+++....
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~   93 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG   93 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccccccccccccccccccccccccc
Confidence            4799999999999999999999994  8999999875543321 136778889999999999999999999999985321


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHHh
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (229)
                       ..+..++.++|+.++.+++++|...+ .++||++||..++....                +.|+.+|..+|..+.+   
T Consensus        94 -~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~~----------------~~Y~~~K~~~E~~l~~---  152 (232)
T d2bkaa1          94 -KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSSN----------------FLYLQVKGEVEAKVEE---  152 (232)
T ss_dssp             -HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTCS----------------SHHHHHHHHHHHHHHT---
T ss_pred             -ccchhhhhhhcccccceeeecccccC-ccccccCCccccccCcc----------------chhHHHHHHhhhcccc---
Confidence             12345678999999999999998875 78999999987664322                4599999999987665   


Q ss_pred             cCCC-eEEEecCceecCCCC
Q 027007          159 EGLP-IVPVYPGVIYGPGKL  177 (229)
Q Consensus       159 ~gi~-~~~irpg~i~g~~~~  177 (229)
                      .+.+ ++++|||.+||++..
T Consensus       153 ~~~~~~~IlRP~~i~G~~~~  172 (232)
T d2bkaa1         153 LKFDRYSVFRPGVLLCDRQE  172 (232)
T ss_dssp             TCCSEEEEEECCEEECTTGG
T ss_pred             ccccceEEecCceeecCCCc
Confidence            3554 899999999999753

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=2.7e-24  Score=169.05  Aligned_cols=190  Identities=24%  Similarity=0.163  Sum_probs=140.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC------CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~   75 (229)
                      ++|||||+++||++++++|+++|++|++++|+++..       ....+++|+++......+..      ..+.++++++.
T Consensus         3 ~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (241)
T d1uaya_           3 SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   75 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------cceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence            689999999999999999999999999999986542       34567899999877655543      24555565553


Q ss_pred             cC----------CCCCCchhhhHhhHHHHHHHHHHHHhc------C---CCceEEEEccceeeecCCCcccCCCCccccc
Q 027007           76 VE----------PWLPDPSRFFAVNVEGLKNVVQAAKET------K---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        76 ~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~------~---~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      ..          ...+.+++.+++|+.++..+++.+.+.      +   +.++||++||..++.+.++.           
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~-----------  144 (241)
T d1uaya_          76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ-----------  144 (241)
T ss_dssp             CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC-----------
T ss_pred             cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc-----------
Confidence            11          112346678999999999998887554      1   23489999999877654433           


Q ss_pred             cccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                         ..|+.+|+    +++.++++++++||+||+|.||.+.++....................+|++.|+|++.+..||..
T Consensus       145 ---~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s  221 (241)
T d1uaya_         145 ---AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE  221 (241)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence               34999998    67777888889999999999999998754332333333344455555889999999999888753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.91  E-value=8.7e-24  Score=169.12  Aligned_cols=163  Identities=19%  Similarity=0.175  Sum_probs=128.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (229)
                      |||||||||||||++|+++|.++|++|++++|+                +.|++|.+++.++++  ++|+|||+|+....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~----------------~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech----------------hccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            999999999999999999999999999999986                348999999999887  57999999986432


Q ss_pred             --CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                        ....+......|+..+..+.+.+....  ..++++||..+|+.....+.+|..+..+   ...|+.+|..+|.++++ 
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~~~e~~~~~~---~~~~~~~k~~~e~~~~~-  139 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEPITEFDEVNP---QSAYGKTKLEGENFVKA-  139 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHH-
T ss_pred             ccccccchhhccccccccccccccccccc--ccccccccceeeeccccccccccccccc---hhhhhhhhhHHHHHHHH-
Confidence              223456678889999999988887764  4788888888887765555555544433   46699999998888765 


Q ss_pred             HhcCCCeEEEecCceecCCCCchhHHHHHHh
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQ  187 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~  187 (229)
                        .+.+.+++||+++|||+......++....
T Consensus       140 --~~~~~~i~R~~~vyG~~~~~~~~~~~~~~  168 (281)
T d1vl0a_         140 --LNPKYYIVRTAWLYGDGNNFVKTMINLGK  168 (281)
T ss_dssp             --HCSSEEEEEECSEESSSSCHHHHHHHHHH
T ss_pred             --hCCCccccceeEEeCCCcccccchhhhhc
Confidence              46789999999999998644444444433

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.90  E-value=4.3e-24  Score=175.00  Aligned_cols=175  Identities=27%  Similarity=0.389  Sum_probs=127.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-----CCCCCCCCCeEEEEccCCChhhHHhhcCC--ccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~   74 (229)
                      ||||||||||||++++++|+++|++|+++++-...     ...+....+++++++|++|.+++.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            89999999999999999999999999999753211     11112224789999999999999998874  699999998


Q ss_pred             ccCC--CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCC-------------cccccccc
Q 027007           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ-------------VHEEKYFC  139 (229)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~-------------~~~~~~~~  139 (229)
                      ....  ...++...+++|+.||.+|++++.+....+++++.||...++.......++..             ...+..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            7533  22366788999999999999999998644455555544444433221111100             00111234


Q ss_pred             CcHHHHHHHHHHHHHHHH-hcCCCeEEEecCceecCCC
Q 027007          140 TQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~-~~gi~~~~irpg~i~g~~~  176 (229)
                      +.|+.+|...|.++.... .++.....+++..+|++..
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ  199 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence            669999999999988875 4589999999999998754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=3.4e-24  Score=169.74  Aligned_cols=168  Identities=18%  Similarity=0.166  Sum_probs=120.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCC--CCCeEEEEccCCChhhHHhhcC---------CccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---------~~d~   68 (229)
                      +||||||+++||++++++|+++|+  .|++.+|+.++++++..  ..+++++++|++|.++++++++         .+|+
T Consensus         5 tilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idi   84 (250)
T d1yo6a1           5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEE
Confidence            699999999999999999999995  68888998876554322  2478999999999998866543         3899


Q ss_pred             EEEeCcccCC-------CCCCchhhhHhhHHHHHHHHHHHHhcCC--------------CceEEEEccceeeecCCCccc
Q 027007           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--------------VEKIIYTSSFFALGSTDGYIA  127 (229)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------------~~~iv~~sS~~~~~~~~~~~~  127 (229)
                      ||||||....       +.+++++.+++|+.+++++++.+.+.+.              ..+++++||........... 
T Consensus        85 linnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-  163 (250)
T d1yo6a1          85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSG-  163 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCST-
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCccc-
Confidence            9999997321       1234778899999999999999876531              23677777765443221100 


Q ss_pred             CCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          128 DENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       128 ~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                        ...    .+...|+.||+    +++.++.++.++||++++|+||++-+++.
T Consensus       164 --~~~----~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         164 --SAQ----FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             --TSS----SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             --ccc----hhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence              000    11235999999    56666677777899999999999998863

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.4e-25  Score=178.76  Aligned_cols=176  Identities=14%  Similarity=0.146  Sum_probs=126.8

Q ss_pred             CEE-EEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCC-----CCCCeEEEEccCCChhhHHhhcC-------Cc
Q 027007            1 MKI-LVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GC   66 (229)
Q Consensus         1 m~v-lItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~-------~~   66 (229)
                      |+| |||||+++||++++++|+++ |++|++.+|+.++.++..     ....+.++++|++|.++++++++       ++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            466 89999999999999999986 899999999876543311     12467899999999999876653       58


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCc-c----------cC
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGY-I----------AD  128 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~-~----------~~  128 (229)
                      |++|||||....      +.+++++.+++|+.+++++++.+.+.++. +++|++||..+....... +          ..
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            999999997422      11246678999999999999999988632 499999997654321100 0          00


Q ss_pred             ----------------CCCccccccccCcHHHHHH----HHHHHHHHHHh----cCCCeEEEecCceecCCC
Q 027007          129 ----------------ENQVHEEKYFCTQYERSKA----VADKIALQAAS----EGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       129 ----------------~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~----~gi~~~~irpg~i~g~~~  176 (229)
                                      .........+...|+.||.    +++.+++++++    .|+++++++||++.++..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                            0000011112356999998    45556666664    389999999999999864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.8e-24  Score=169.93  Aligned_cols=182  Identities=15%  Similarity=0.082  Sum_probs=128.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-------cC--CccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-------CF--GCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-------~~--~~d~vi~   71 (229)
                      .+||||||+++||++++++|+++|++|+++++...+...     ....+..|..+.++...+       +.  ++|++||
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence            479999999999999999999999999999987643221     233445666655544322       22  4899999


Q ss_pred             eCcccC---C----CCCCchhhhHhhHHHHHHHHHHHHhcCC-CceEEEEccceeeecCCCcccCCCCccccccccCcHH
Q 027007           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (229)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  143 (229)
                      |||...   .    ..++|++.+++|+.++.++.+++.++++ .++||++||.++..+.++.              ..|+
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~--------------~~Y~  143 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM--------------IGYG  143 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB--------------HHHH
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC--------------cccH
Confidence            998521   1    1234777899999999999999988753 2499999998876554433              3499


Q ss_pred             HHHHHHHHHHHHHH------hcCCCeEEEecCceecCCCCchhHHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          144 RSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       144 ~sK~~~e~~~~~~~------~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                      .||+..+.+.+.++      ++|+++++|.||.+.+|...       ...  ......+...|++++....|+
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-------~~~--~~~~~~~~~~pe~va~~~~~l  207 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-------KSM--PEADFSSWTPLEFLVETFHDW  207 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-------HHS--TTSCGGGSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-------hhC--ccchhhcCCCHHHHHHHHHHH
Confidence            99996666666554      35899999999999998531       111  111122345577777666554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=6.1e-24  Score=168.85  Aligned_cols=195  Identities=13%  Similarity=0.098  Sum_probs=140.0

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhcC-------CccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   68 (229)
                      ++|||||+|  +||+++++.|+++|++|++.+|++...+.+    ........++.|+++..++.+.+.       ..|+
T Consensus         7 ~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   86 (258)
T d1qsga_           7 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDG   86 (258)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEE
T ss_pred             EEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccce
Confidence            689999998  899999999999999999999985432211    112356778889999887765543       4799


Q ss_pred             EEEeCcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCccccc
Q 027007           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEK  136 (229)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  136 (229)
                      +||+|+....           ..+.+...+.+|+.+...+.+++.+.++. +.+|++||..+..+.+.            
T Consensus        87 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~------------  154 (258)
T d1qsga_          87 FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------------  154 (258)
T ss_dssp             EEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------------
T ss_pred             EEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC------------
Confidence            9999976321           11224556788899999999988877533 37888888765443322            


Q ss_pred             cccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhHHH
Q 027007          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCKFL  210 (229)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  210 (229)
                        ...|+.+|+    +++.++++++++||++|+|+||.+.++......  ........ ...+++|++.|+|+++++.||
T Consensus       155 --~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~~pl~R~~~peeia~~v~fL  231 (258)
T d1qsga_         155 --YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCE-AVTPIRRTVTIEDVGNSAAFL  231 (258)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHH-HHSTTSSCCCHHHHHHHHHHH
T ss_pred             --cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHH-hCCCCCCCcCHHHHHHHHHHH
Confidence              245999999    556677777888999999999999998754322  11122222 223467899999999888876


Q ss_pred             H
Q 027007          211 T  211 (229)
Q Consensus       211 ~  211 (229)
                      -
T Consensus       232 ~  232 (258)
T d1qsga_         232 C  232 (258)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.89  E-value=9.9e-23  Score=163.88  Aligned_cols=167  Identities=19%  Similarity=0.226  Sum_probs=123.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcccC-
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE-   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~~~-   77 (229)
                      ||||||||+||||++|+++|.++|+.| .++++...            +.+|++|.+.+.++++  ++|+|||+||... 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            999999999999999999999988654 45544321            2579999999999887  4799999998643 


Q ss_pred             -CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHH
Q 027007           78 -PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (229)
Q Consensus        78 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (229)
                       .+..++...++.|+.++.+|++++....  .+++++||..+|......+.+|..+..+   .+.|+.+|..+|...+..
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~~~~~E~~~~~p---~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGDIPWQETDATSP---LNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTTCCBCTTSCCCC---SSHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccccccccccccchhhhhccc--cccccccccccccCCCCCCCccccccCC---CchHhhhhhhhhhhHHhh
Confidence             2445677889999999999999998764  4788889888887666555556555433   467999999999887764


Q ss_pred             HhcCCCeEEEecCceecCCCCchhHHHHHHhh
Q 027007          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQW  188 (229)
Q Consensus       157 ~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~  188 (229)
                      ..   ...+++++..++........+....+.
T Consensus       143 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (298)
T d1n2sa_         143 CP---KHLIFRTSWVYAGKGNNFAKTMLRLAK  171 (298)
T ss_dssp             CS---SEEEEEECSEECSSSCCHHHHHHHHHH
T ss_pred             hc---ccccccccceeeccCCccchhhhhhhc
Confidence            33   356666666665443333344444343

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=1.7e-22  Score=162.36  Aligned_cols=193  Identities=21%  Similarity=0.174  Sum_probs=130.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCC-----------------------CCCCCeEEEEccCCChhh
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL-----------------------PSEGALELVYGDVTDYRS   58 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~-----------------------~~~~~~~~~~~D~~~~~~   58 (229)
                      +|||||+++||++++++|+++|++|++.+|+..+ .+.+                       .....+....+|+++.++
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~   84 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR   84 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHH
Confidence            5899999999999999999999999998876421 1000                       000123445678999888


Q ss_pred             HHhhc-------CCccEEEEeCcccCC------CCCCc--------------hhhhHhhHHHHHHHHHHHHhc-------
Q 027007           59 LVDAC-------FGCHVIFHTAALVEP------WLPDP--------------SRFFAVNVEGLKNVVQAAKET-------  104 (229)
Q Consensus        59 ~~~~~-------~~~d~vi~~a~~~~~------~~~~~--------------~~~~~~n~~~~~~l~~~~~~~-------  104 (229)
                      +++++       .++|++|||||....      +.+++              ...+.+|+.+++.+.+++.+.       
T Consensus        85 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  164 (284)
T d1e7wa_          85 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK  164 (284)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG
T ss_pred             HHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHH
Confidence            87765       368999999997422      11122              236889999999999887543       


Q ss_pred             --CCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCc
Q 027007          105 --KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT  178 (229)
Q Consensus       105 --~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~  178 (229)
                        ....++++++|.....+..+.              ..|+.+|.    +++.++++++++||++|+|.||.+.......
T Consensus       165 ~~~~~~~ii~~~s~~~~~~~~~~--------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~  230 (284)
T d1e7wa_         165 HRGTNYSIINMVDAMTNQPLLGY--------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP  230 (284)
T ss_dssp             GSCSCEEEEEECCTTTTSCCTTC--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSC
T ss_pred             hcCCCCcccccccccccCCccce--------------eeeccccccchhhhHHHHHHhCCccccccccccccccccccCC
Confidence              112378888877654443322              34999998    6777788888899999999999754443222


Q ss_pred             hhHHHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          179 TGNLVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        ....+......+..+|++.|+|+++++.||-
T Consensus       231 --~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~  261 (284)
T d1e7wa_         231 --PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC  261 (284)
T ss_dssp             --HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence              2222333344444578999999999998874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.89  E-value=3e-23  Score=164.98  Aligned_cols=159  Identities=26%  Similarity=0.337  Sum_probs=125.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcC------Cc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF------GC   66 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~------~~   66 (229)
                      ++|||||+|+||++++++|+++|+ +|+++.|+..+.+...        ....+.++.+|++|.+++.++++      .+
T Consensus        11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i   90 (259)
T d2fr1a1          11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPL   90 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccc
Confidence            689999999999999999999998 5888888643322211        12368899999999999888765      37


Q ss_pred             cEEEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      |.|||+++....      +.++++..+++|+.++.++.+++.+.. .++||++||..+..+.++.              .
T Consensus        91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~~--------------~  155 (259)
T d2fr1a1          91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPGL--------------G  155 (259)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTTC--------------T
T ss_pred             cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCccc--------------H
Confidence            899999997432      223466789999999999999887763 5799999998876554433              3


Q ss_pred             cHHHHHHHHHHHHHHHHhcCCCeEEEecCceecCC
Q 027007          141 QYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~  175 (229)
                      .|+.+|.+.+.+++++..+|++++.|+||.+.+++
T Consensus       156 ~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG  190 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred             HHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCc
Confidence            49999999999999999999999999999988775

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.88  E-value=2.6e-23  Score=163.11  Aligned_cols=155  Identities=17%  Similarity=0.155  Sum_probs=115.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-------c--CCccEEEEe
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-------C--FGCHVIFHT   72 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-------~--~~~d~vi~~   72 (229)
                      |||||||+++||++++++|+++|++|++++|++.+...     ....+.+|+.+.++....       +  .++|+||||
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn   78 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   78 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            79999999999999999999999999999998654221     223445676665443221       1  358999999


Q ss_pred             CcccC---CCC----CCchhhhHhhHHHHHHHHHHHHhcCCC-ceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           73 AALVE---PWL----PDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        73 a~~~~---~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                      ||...   ...    +.|+..+++|+.+++++++++.++++. ++||++||..+..+.++.              ..|+.
T Consensus        79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--------------~~Y~a  144 (235)
T d1ooea_          79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM--------------IGYGM  144 (235)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB--------------HHHHH
T ss_pred             CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc--------------cchHH
Confidence            99622   111    246677999999999999999887633 489999998776554432              34999


Q ss_pred             HHHHHHHHHHHHH------hcCCCeEEEecCceecCC
Q 027007          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       145 sK~~~e~~~~~~~------~~gi~~~~irpg~i~g~~  175 (229)
                      +|...+.+.+.++      ..+++++.|+||.+.+|.
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence            9997766666554      247899999999998774

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.6e-23  Score=166.30  Aligned_cols=160  Identities=18%  Similarity=0.137  Sum_probs=124.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhc-------CCccE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDAC-------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~-------~~~d~   68 (229)
                      ++|||||+++||++++++|+++|++|++++|+.++++++..      ...+..+.+|+++.++.....       ...|+
T Consensus        16 ~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          16 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            68999999999999999999999999999998765443211      135678889999887765543       35899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHHHHHHHHHHHHhcCC--CceEEEEccceeeecCCCcccCCCCccccccccC
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  140 (229)
                      ++|||+....      +.+++++.+++|+.++..+++.+.+++.  .+++|++||.+++.+.+..              .
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~--------------~  161 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV--------------A  161 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC--------------H
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc--------------h
Confidence            9999987322      2235667899999999999999987652  3599999998876554332              4


Q ss_pred             cHHHHHH----HHHHHHHHHHh--cCCCeEEEecCceecCC
Q 027007          141 QYERSKA----VADKIALQAAS--EGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~--~gi~~~~irpg~i~g~~  175 (229)
                      .|+.||+    +++.++.+++.  .||+|+.|.||.+.++.
T Consensus       162 ~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         162 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence            5999999    56666667654  36999999999998874

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.85  E-value=7.8e-22  Score=157.84  Aligned_cols=197  Identities=13%  Similarity=0.078  Sum_probs=127.3

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCCCCCCC----CCCCCeEEEEccCCChhhHHhhc-------CCccE
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDAC-------FGCHV   68 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~-------~~~d~   68 (229)
                      ++|||||+|  +||++++++|+++|++|++++|+++..+..    .......++++|+++.+++.+++       ..+|+
T Consensus         7 ~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~   86 (274)
T d2pd4a1           7 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDF   86 (274)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCe
Confidence            689999876  899999999999999999999985321111    11135567899999988876665       35899


Q ss_pred             EEEeCcccCC------CCCCchhhhHhhHH----HHHHHHHHHHhcCCCc-eEEEEccceeeecCCCcccCCCCcccccc
Q 027007           69 IFHTAALVEP------WLPDPSRFFAVNVE----GLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADENQVHEEKY  137 (229)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  137 (229)
                      +|||++....      ........+..+..    +...+.+...+..+.. .++++|+..........            
T Consensus        87 lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~------------  154 (274)
T d2pd4a1          87 IVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY------------  154 (274)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC------------
T ss_pred             EEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccc------------
Confidence            9999986321      11122222222322    3333333333333233 45555555444333222            


Q ss_pred             ccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhH-HHHHHhhcccceeeeehhhHhhhhhhHHHHH
Q 027007          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN-LVAKLQWKKVDLVKDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  212 (229)
                        ..|+.+|.    ++..++++++++||++|+|+||.+.++....... ...........++++++.|+|++.++.||-.
T Consensus       155 --~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S  232 (274)
T d2pd4a1         155 --NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS  232 (274)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             --hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhC
Confidence              34999998    4556677788899999999999999987533221 1111222233456789999999999888753

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=3.3e-21  Score=148.45  Aligned_cols=149  Identities=19%  Similarity=0.209  Sum_probs=111.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-CCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~~a~~~~   77 (229)
                      +||||||||||||++++++|+++|+  +|++..|++..  ..   ..   +..+..|..++.+.+ ..+|.|||++|...
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--~~---~~---~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--EH---PR---LDNPVGPLAELLPQLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--CC---TT---EECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--hc---cc---ccccccchhhhhhccccchheeeeeeeeec
Confidence            4899999999999999999999997  67777765422  11   12   244555666655544 45899999998642


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                      ........+.+.|+.++.+++++|.+. +.++++++||..++...                .+.|..+|..+|..+++  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~----------------~~~y~~~K~~~E~~l~~--  135 (212)
T d2a35a1          75 KEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS----------------SIFYNRVKGELEQALQE--  135 (212)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHTT--
T ss_pred             cccccccccccchhhhhhhcccccccc-ccccccccccccccccc----------------ccchhHHHHHHhhhccc--
Confidence            222334578999999999999999987 47899999998766432                24599999999987654  


Q ss_pred             hcCC-CeEEEecCceecCCCC
Q 027007          158 SEGL-PIVPVYPGVIYGPGKL  177 (229)
Q Consensus       158 ~~gi-~~~~irpg~i~g~~~~  177 (229)
                       .+. +++++||+.+|||...
T Consensus       136 -~~~~~~~I~Rp~~v~G~~~~  155 (212)
T d2a35a1         136 -QGWPQLTIARPSLLFGPREE  155 (212)
T ss_dssp             -SCCSEEEEEECCSEESTTSC
T ss_pred             -cccccceeeCCcceeCCccc
Confidence             355 4899999999999753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=2.5e-21  Score=158.85  Aligned_cols=159  Identities=11%  Similarity=0.078  Sum_probs=111.8

Q ss_pred             EEEEc--CCChHHHHHHHHHHHCCCeEEEEEcCCC-----------CCCC--CCC----CCCeEEEEc------------
Q 027007            3 ILVSG--ASGYLGGRLCHALLKQGHSVRALVRRTS-----------DISG--LPS----EGALELVYG------------   51 (229)
Q Consensus         3 vlItG--g~G~iG~~l~~~l~~~g~~V~~~~r~~~-----------~~~~--~~~----~~~~~~~~~------------   51 (229)
                      +||||  ++++||++++++|+++|++|++.++...           +...  ...    ........+            
T Consensus         5 AlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (329)
T d1uh5a_           5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDE   84 (329)
T ss_dssp             EEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCH
T ss_pred             EEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccch
Confidence            69999  5579999999999999999999887532           1110  000    011122333            


Q ss_pred             --------cCCChhhHHhh-------cCCccEEEEeCcccCC--------CCCCchhhhHhhHHHHHHHHHHHHhcCCC-
Q 027007           52 --------DVTDYRSLVDA-------CFGCHVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-  107 (229)
Q Consensus        52 --------D~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-  107 (229)
                              |+++.++++++       +.++|++|||||....        +.++|++.+++|+.++.++++++.++++. 
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~  164 (329)
T d1uh5a_          85 ETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ  164 (329)
T ss_dssp             HHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccc
Confidence                    44454444333       3579999999986321        23467888999999999999999998633 


Q ss_pred             ceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHh-cCCCeEEEecCceecC
Q 027007          108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGP  174 (229)
Q Consensus       108 ~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~gi~~~~irpg~i~g~  174 (229)
                      ++||++||..+....+++             ...|+.+|+    +++.++.++++ +|||||+|+||.+.++
T Consensus       165 GsIv~iss~~~~~~~p~y-------------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~  223 (329)
T d1uh5a_         165 SSIISLTYHASQKVVPGY-------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred             cccccceeehhccccccc-------------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence            489999987665443221             234999998    66677777875 6999999999999873

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.85  E-value=1.8e-21  Score=155.13  Aligned_cols=196  Identities=14%  Similarity=0.054  Sum_probs=129.6

Q ss_pred             EEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-C--CCCCCeEEEEccCCChhhHHhhcC----------Cc
Q 027007            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDISG-L--PSEGALELVYGDVTDYRSLVDACF----------GC   66 (229)
Q Consensus         2 ~vlItGg--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~--~~~~~~~~~~~D~~~~~~~~~~~~----------~~   66 (229)
                      ++|||||  +.+||++++++|+++|++|++++|+..+..+ +  ........+++|+++.+++.++++          .+
T Consensus         8 ~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~l   87 (268)
T d2h7ma1           8 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKL   87 (268)
T ss_dssp             EEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCc
Confidence            6899995  4579999999999999999999998654211 1  111356788999999876654432          47


Q ss_pred             cEEEEeCcccCC-----------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCcccc
Q 027007           67 HVIFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (229)
Q Consensus        67 d~vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  135 (229)
                      |+++||++..+.           +...+.+.+.+|+.......+...+....+.+++++|.......+.           
T Consensus        88 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~-----------  156 (268)
T d2h7ma1          88 DGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA-----------  156 (268)
T ss_dssp             EEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT-----------
T ss_pred             ceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc-----------
Confidence            999999986321           1123444577777777777777766543345555555444333322           


Q ss_pred             ccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCC-------c--hhH---HHHHHhhcccceeeeehh
Q 027007          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKL-------T--TGN---LVAKLQWKKVDLVKDIFL  199 (229)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~-------~--~~~---~~~~~~~~~~~~~~~~~~  199 (229)
                         ...|+.+|.    +++.++++++++||+||+|+||.+.++...       .  ...   ..........+..++++.
T Consensus       157 ---~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~  233 (268)
T d2h7ma1         157 ---YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD  233 (268)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred             ---cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCC
Confidence               234999998    556667777888999999999999886321       0  001   111111122222345889


Q ss_pred             hHhhhhhhHHHH
Q 027007          200 LERMRHSCKFLT  211 (229)
Q Consensus       200 ~~~~~~~~~~l~  211 (229)
                      |+|+++++.||-
T Consensus       234 p~dva~~v~fL~  245 (268)
T d2h7ma1         234 ATPVAKTVCALL  245 (268)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999988875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.84  E-value=2.3e-20  Score=150.77  Aligned_cols=196  Identities=9%  Similarity=0.049  Sum_probs=127.6

Q ss_pred             EEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCCC-----------CC--CC---CCCCC---CeEEEEccCC------
Q 027007            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS-----------DI--SG---LPSEG---ALELVYGDVT------   54 (229)
Q Consensus         2 ~vlItGg~G--~iG~~l~~~l~~~g~~V~~~~r~~~-----------~~--~~---~~~~~---~~~~~~~D~~------   54 (229)
                      ++|||||+|  +||++++++|+++|++|++.+|++.           ..  ..   .....   .+..+..++.      
T Consensus        10 ~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (297)
T d1d7oa_          10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccch
Confidence            689999876  9999999999999999999988531           00  00   00000   1222222222      


Q ss_pred             ------------Chhh-------HHhhcCCccEEEEeCcccC--------CCCCCchhhhHhhHHHHHHHHHHHHhcCCC
Q 027007           55 ------------DYRS-------LVDACFGCHVIFHTAALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (229)
Q Consensus        55 ------------~~~~-------~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (229)
                                  +..+       +.+.+.++|++|||||...        .+.++|++.+++|+.++.++++++.+.+..
T Consensus        90 ~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~  169 (297)
T d1d7oa_          90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc
Confidence                        2111       2223457999999998632        123457889999999999999999887533


Q ss_pred             c-eEEEEccceeeecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHH-hcCCCeEEEecCceecCCCCchhH
Q 027007          108 E-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGN  181 (229)
Q Consensus       108 ~-~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~-~~gi~~~~irpg~i~g~~~~~~~~  181 (229)
                      + +++.+++.........             ....|+.+|.    ++..++.+++ ++||++|+|+||.+.++.......
T Consensus       170 ~g~~~~~~~~~~~~~~~~-------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~  236 (297)
T d1d7oa_         170 GGASISLTYIASERIIPG-------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             EEEEEEEECGGGTSCCTT-------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             CCcceeeeehhhcccccc-------------cccceecccccccccccccchhccccceEEecccccccccchhhhhccC
Confidence            2 5555555433221110             0234999997    4555667775 579999999999999997654221


Q ss_pred             --HHHHHhhcccceeeeehhhHhhhhhhHHHH
Q 027007          182 --LVAKLQWKKVDLVKDIFLLERMRHSCKFLT  211 (229)
Q Consensus       182 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  211 (229)
                        -..+.. ....+++|++.|+|++.++.||-
T Consensus       237 ~~~~~~~~-~~~~PlgR~~~peevA~~v~fL~  267 (297)
T d1d7oa_         237 IDTMIEYS-YNNAPIQKTLTADEVGNAAAFLV  267 (297)
T ss_dssp             HHHHHHHH-HHHSSSCCCBCHHHHHHHHHHHT
T ss_pred             CHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHh
Confidence              111222 23345788999999999888875

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.8e-20  Score=150.92  Aligned_cols=165  Identities=21%  Similarity=0.249  Sum_probs=115.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHH------hhcCCccEEEEeC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLV------DACFGCHVIFHTA   73 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~------~~~~~~d~vi~~a   73 (229)
                      ||||||+||||++++++|+++|+ +|+++++-.....  .+..     ....|..+.++..      ..+..+++|+|+|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-----LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-----SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-----cchhhhccchHHHHHHhhhhcccchhhhhhhc
Confidence            79999999999999999999995 7888874321110  0100     0112222222221      2234578999999


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      +.......+.....+.|+.++.++++++.... + ++++.||..++........+++.+.   .+.+.|+.+|.++|.++
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~~~~~~~~---~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYE---KPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGC---CCSSHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccc-c-ccccccccccccccccccccccccc---ccccccccccchhhhhc
Confidence            87555555666788899999999999998875 3 5666677666655443333333332   23467999999999999


Q ss_pred             HHHHh-cCCCeEEEecCceecCCCC
Q 027007          154 LQAAS-EGLPIVPVYPGVIYGPGKL  177 (229)
Q Consensus       154 ~~~~~-~gi~~~~irpg~i~g~~~~  177 (229)
                      ..+.. .+++++++||+.+|||...
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~  176 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREG  176 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCG
T ss_pred             cccccccccccccccceeEeecccc
Confidence            99874 4899999999999999763

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.84  E-value=6.4e-21  Score=151.63  Aligned_cols=195  Identities=18%  Similarity=0.227  Sum_probs=127.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-CCCC------CCCCeEEEEccCCCh----hhHHh-------hc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLP------SEGALELVYGDVTDY----RSLVD-------AC   63 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~------~~~~~~~~~~D~~~~----~~~~~-------~~   63 (229)
                      .+|||||+++||++++++|+++|++|++++|+.++. +.+.      .......++.|+.+.    +.+.+       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            369999999999999999999999999999986432 1110      112455666666543    22322       23


Q ss_pred             CCccEEEEeCcccCCCC-----------------CCchhhhHhhHHHHHHHHHHHHhcC--------CCceEEEEcccee
Q 027007           64 FGCHVIFHTAALVEPWL-----------------PDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFA  118 (229)
Q Consensus        64 ~~~d~vi~~a~~~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~iv~~sS~~~  118 (229)
                      ..+|++|||||...+..                 ..+...+..|+.+...........+        ....+++++|...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            46999999999732210                 0123345666666666666554432        1235666776655


Q ss_pred             eecCCCcccCCCCccccccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchhHHHHHHhhccccee
Q 027007          119 LGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLQWKKVDLV  194 (229)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~~~~~~~~~~~~~~~  194 (229)
                      ....++.              ..|+.||+    +++.++++++++||++|.|+||.+.+|...+. . ..+.+....+..
T Consensus       163 ~~~~~~~--------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~-~-~~~~~~~~~pl~  226 (266)
T d1mxha_         163 DLPLPGF--------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ-E-TQEEYRRKVPLG  226 (266)
T ss_dssp             GSCCTTC--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH-H-HHHHHHTTCTTT
T ss_pred             cccCcch--------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH-H-HHHHHHhcCCCC
Confidence            4444332              34999999    56667777788899999999999998865432 2 223333333322


Q ss_pred             eeehhhHhhhhhhHHHHH
Q 027007          195 KDIFLLERMRHSCKFLTW  212 (229)
Q Consensus       195 ~~~~~~~~~~~~~~~l~~  212 (229)
                      ++.+.|+|+++++.||-.
T Consensus       227 r~~~~peeva~~v~fL~s  244 (266)
T d1mxha_         227 QSEASAAQIADAIAFLVS  244 (266)
T ss_dssp             SCCBCHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHhC
Confidence            445889999998877753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.83  E-value=2.9e-20  Score=147.12  Aligned_cols=198  Identities=19%  Similarity=0.100  Sum_probs=121.1

Q ss_pred             CEE-EEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc--------CCccEEEE
Q 027007            1 MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFH   71 (229)
Q Consensus         1 m~v-lItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--------~~~d~vi~   71 (229)
                      ||| |||||+++||++++++|+++|++|++++|+.++            ...|+.+.+......        +.+|+++|
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            875 899999999999999999999999999997542            245777765543332        24899999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcC---CCceEEEEccceeeecC-CCcccCC---C----------Cccc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGST-DGYIADE---N----------QVHE  134 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~iv~~sS~~~~~~~-~~~~~~~---~----------~~~~  134 (229)
                      +|+... ....+.....+|..+...+.+...+..   .......+.+....... ...+...   .          ....
T Consensus        69 ~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~  147 (257)
T d1fjha_          69 CAGLGP-QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAG  147 (257)
T ss_dssp             CCCCCT-TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCC
T ss_pred             cCCCCC-cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccC
Confidence            998643 235567788899998888877765431   12344444443211100 0000000   0          0000


Q ss_pred             cccccCcHHHHHH----HHHHHHHHHHhcCCCeEEEecCceecCCCCchh--HHHHHHhhcccceeeeehhhHhhhhhhH
Q 027007          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG--NLVAKLQWKKVDLVKDIFLLERMRHSCK  208 (229)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~gi~~~~irpg~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (229)
                      .......|+.||.    +++.++.+++++||+||+|+||.+.+|......  ....+.......+++|++.|+|+++++.
T Consensus       148 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~  227 (257)
T d1fjha_         148 EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIA  227 (257)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHH
T ss_pred             CCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            0011235999998    666777788899999999999999998643211  1111222333456788999999999988


Q ss_pred             HHH
Q 027007          209 FLT  211 (229)
Q Consensus       209 ~l~  211 (229)
                      ||-
T Consensus       228 fL~  230 (257)
T d1fjha_         228 FLM  230 (257)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            873

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=3.2e-20  Score=144.43  Aligned_cols=160  Identities=23%  Similarity=0.225  Sum_probs=115.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe--EEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC-
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP-   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-   78 (229)
                      +|||||||||||++++++|+++|++  |+.+.|++++...+..  .++++.+|+++.+++.++++++|+|||+|+.... 
T Consensus         5 tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~   82 (252)
T d2q46a1           5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSAVPKM   82 (252)
T ss_dssp             EEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEE
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEeecccc
Confidence            7999999999999999999999965  6667777654433332  6788999999999999999999999999985211 


Q ss_pred             --------------CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHH
Q 027007           79 --------------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (229)
Q Consensus        79 --------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  144 (229)
                                    ....+.....+|+.++.++++...... .+...+.|+...+.+.....         ......|..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~---------~~~~~~~~~  152 (252)
T d2q46a1          83 KPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLN---------KLGNGNILV  152 (252)
T ss_dssp             CTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGG---------GGGGCCHHH
T ss_pred             ccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccc---------cccccchhh
Confidence                          112355668889999999999888774 56777777655443221110         011233555


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEecCceecCCC
Q 027007          145 SKAVADKIALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       145 sK~~~e~~~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .+.+.+.+..   ..|++++++||+++|||..
T Consensus       153 ~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         153 WKRKAEQYLA---DSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             HHHHHHHHHH---HSSSCEEEEEECEEECSCT
T ss_pred             hhhhhhhhhh---cccccceeecceEEECCCc
Confidence            5544443322   3689999999999999975

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.77  E-value=2.9e-19  Score=144.04  Aligned_cols=154  Identities=19%  Similarity=0.141  Sum_probs=109.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +||||||||||||++++++|+++|++|++++|+.......       ....+++++++|++|.+++.+++.+.+.+++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~   83 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   83 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence            5899999999999999999999999999999976532210       012468999999999999999999999999998


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHH
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  153 (229)
                      +...         ...|..++.++++++.... ..++++.||...+......         +..+...|..+|..++...
T Consensus        84 ~~~~---------~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  144 (312)
T d1qyda_          84 AGGV---------LSHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDIMEH---------ALQPGSITFIDKRKVRRAI  144 (312)
T ss_dssp             CCSS---------SSTTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTSCCC---------CCSSTTHHHHHHHHHHHHH
T ss_pred             hhcc---------cccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCCccc---------ccchhhhhhHHHHHHHHhh
Confidence            6422         2345556778888888875 3566666765443221111         1111234566665555443


Q ss_pred             HHHHhcCCCeEEEecCceecCCC
Q 027007          154 LQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       154 ~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      .   ..+++++++||+.+||+..
T Consensus       145 ~---~~~~~~~i~r~~~~~g~~~  164 (312)
T d1qyda_         145 E---AASIPYTYVSSNMFAGYFA  164 (312)
T ss_dssp             H---HTTCCBCEEECCEEHHHHT
T ss_pred             c---ccccceEEeccceeecCCc
Confidence            2   3589999999999999643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.72  E-value=5.2e-18  Score=135.80  Aligned_cols=149  Identities=27%  Similarity=0.333  Sum_probs=103.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      +||||||||||||++++++|+++|++|++++|+........        ....++++.+|+.+.+...+.+++.+.++|+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            58999999999999999999999999999999865433211        0136789999999999999999999999999


Q ss_pred             CcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHH
Q 027007           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (229)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  152 (229)
                      ++..             +..++.++++++.... .+++++.||........       .....   ...+...+...+..
T Consensus        84 ~~~~-------------~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~-------~~~~~---~~~~~~~~~~~~~~  139 (307)
T d1qyca_          84 VGSL-------------QIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNV-------HAVEP---AKSVFEVKAKVRRA  139 (307)
T ss_dssp             CCGG-------------GSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSC-------CCCTT---HHHHHHHHHHHHHH
T ss_pred             cccc-------------ccchhhHHHHHHHHhc-cccceeeeccccccccc-------ccccc---ccccccccccccch
Confidence            8642             2223456677777764 56777776643221111       11000   11233333333333


Q ss_pred             HHHHHhcCCCeEEEecCceecCCC
Q 027007          153 ALQAASEGLPIVPVYPGVIYGPGK  176 (229)
Q Consensus       153 ~~~~~~~gi~~~~irpg~i~g~~~  176 (229)
                      ..   ..+++++++||+.+||+..
T Consensus       140 ~~---~~~~~~~i~r~~~v~g~~~  160 (307)
T d1qyca_         140 IE---AEGIPYTYVSSNCFAGYFL  160 (307)
T ss_dssp             HH---HHTCCBEEEECCEEHHHHT
T ss_pred             hh---ccCCCceecccceecCCCc
Confidence            32   3589999999999999753

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.66  E-value=4.6e-16  Score=127.82  Aligned_cols=149  Identities=22%  Similarity=0.200  Sum_probs=107.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhh-HHhhcCCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~a~~~~   77 (229)
                      ++|+|||||||||++++++|+++|++|+++.|++.+..  .+....+++.+++|+.|.++ +..+++.+|.++++.... 
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~-   82 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ-   82 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST-
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecccc-
Confidence            37999999999999999999999999999999876432  12223478999999999665 567788888888765321 


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccceeeecCCCcccCCCCccccccccCcHHHHHHHHHHHHHHHH
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (229)
                               ...++..+.++++++...+ ..++++.||...........            ...|..+|...+....+  
T Consensus        83 ---------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~~~------------~~~~~~~k~~~~~~~~~--  138 (350)
T d1xgka_          83 ---------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGPWP------------AVPMWAPKFTVENYVRQ--  138 (350)
T ss_dssp             ---------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSSCC------------CCTTTHHHHHHHHHHHT--
T ss_pred             ---------cchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCccc------------chhhhhhHHHHHHHHHh--
Confidence                     2346677889999998886 45666677754332221111            13366778766665443  


Q ss_pred             hcCCCeEEEecCceecCC
Q 027007          158 SEGLPIVPVYPGVIYGPG  175 (229)
Q Consensus       158 ~~gi~~~~irpg~i~g~~  175 (229)
                       .++++.++||+.+++..
T Consensus       139 -~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         139 -LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             -SSSCEEEEEECEEGGGC
T ss_pred             -hccCceeeeeceeeccc
Confidence             47899999999987753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.47  E-value=2.1e-16  Score=119.38  Aligned_cols=96  Identities=18%  Similarity=0.143  Sum_probs=73.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..    ...+....+|++|.+++.++++++|+||||||...
T Consensus        25 ~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~g~  104 (191)
T d1luaa1          25 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGL  104 (191)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCTTC
T ss_pred             EEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCcccc
Confidence            79999999999999999999999999999999765433211    12455678999999999999999999999998632


Q ss_pred             --CCCCCchhhhHhhHHHHHHH
Q 027007           78 --PWLPDPSRFFAVNVEGLKNV   97 (229)
Q Consensus        78 --~~~~~~~~~~~~n~~~~~~l   97 (229)
                        .+.++|...+++|+.+..+.
T Consensus       105 ~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1         105 ELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             CCBCHHHHHTCTTCCEEEECCC
T ss_pred             ccCCHHHHHhhhcceeehhHhh
Confidence              12234555566665554443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.80  E-value=1.2e-09  Score=76.59  Aligned_cols=72  Identities=22%  Similarity=0.312  Sum_probs=60.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      |+|+|+|+ |.+|+.+++.|.++|++|+++++++++.+.+....+...+.+|.+|++.+.++ ++++|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            99999997 99999999999999999999999887655443323567899999999999887 46788888653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.77  E-value=9.1e-09  Score=73.03  Aligned_cols=112  Identities=21%  Similarity=0.149  Sum_probs=78.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ||.|+||+|.+|++++..|+.+|  .++++++.++.+.+  ++...........-+ ...+..+.++++|+||.+||...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCCcCC
Confidence            79999999999999999999888  47899987653211  111100111111112 24455667789999999999754


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ....+..+.++.|......+++.+.++.+...++.+|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            4445667889999999999999999996444555554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.64  E-value=1.6e-07  Score=66.52  Aligned_cols=109  Identities=25%  Similarity=0.226  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-C--CeEEEEEcCCCC------CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-G--HSVRALVRRTSD------ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g--~~V~~~~r~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      |||.|+|++|.+|++++..|..+ +  .++.+++..+..      +........... ..+-.+.    +.+++.|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~----~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDAT----PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCH----HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCc----cccCCCCEEEE
Confidence            99999999999999999887643 3  789999875321      001111111111 2222222    24678999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +||.......+..+++..|..-...+.+.+.++.+...++.+|
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9997554445667889999999999999999987544566555

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.60  E-value=4.7e-07  Score=63.98  Aligned_cols=108  Identities=16%  Similarity=0.119  Sum_probs=75.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCC--CC----CC-----CCCCCeEEEEccCCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--IS----GL-----PSEGALELVYGDVTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~--~~----~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~d   67 (229)
                      |||.|+|++|.+|++++..|+.++  .++.+++++++.  .+    ++     .....++....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            999999999999999999999998  589999987531  11    00     0001222211111122    3467899


Q ss_pred             EEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEE
Q 027007           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (229)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~  113 (229)
                      +||-+||.......+..+.++.|..-...+++.+.++. .+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            99999997544445566789999999999999998886 3455434

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.58  E-value=7.2e-08  Score=68.16  Aligned_cols=107  Identities=21%  Similarity=0.157  Sum_probs=75.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|+.++..|+.++  .++.++++++++...    +..     ....++...+  |.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeEE
Confidence            99999995 999999999999988  589999988754221    000     0122232221  23    346789999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+||.......+-.+.++.|..-...+++.+.++.+...++.+|
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            999997554444566789999999999999999886444555443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.52  E-value=1.9e-07  Score=66.15  Aligned_cols=106  Identities=15%  Similarity=0.221  Sum_probs=69.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC--------CCCCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|+.++..|+.+|  .+++++|+++++.+.        ............|   ++    .++++|+||
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~----~~~~adivv   77 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YS----DCKDADLVV   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GG----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HH----HhccccEEE
Confidence            69999995 999999999999988  689999987643110        0111223344444   32    357899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .+||.......+..+.+..|+.-...+++.+.++.....++.+|
T Consensus        78 itag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99987544334556788999999999999999886433444443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.42  E-value=2.3e-07  Score=65.26  Aligned_cols=106  Identities=20%  Similarity=0.266  Sum_probs=74.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC--------CCCCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      |||.|+|+ |.+|+.++..|+.++  .++.++++++++.+.        ............|   .    +.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            89999996 999999999998887  589999987643211        0001123333322   3    3367899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+..+.+..|..-...+++.+.++.+...++.+|
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            99997554444556788999999999999999986444555444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.41  E-value=9.9e-08  Score=67.37  Aligned_cols=107  Identities=21%  Similarity=0.198  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CC-----CCCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP-----SEGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      |||.|+|+ |.+|++++..|+.+|  .++.++++++++.+.    +.     .....+....+  |.    +.++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence            99999995 999999999999887  579999987643211    00     00111222211  22    346889999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+||.......+..+.+..|..-...+.+.+.++.+...++.+|
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            999997554445667889999999999999999986444455444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.35  E-value=4.5e-06  Score=58.57  Aligned_cols=106  Identities=22%  Similarity=0.218  Sum_probs=70.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CC----CCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      .||.|+|+ |.+|+.++..|+.++  .++.++++++++.+.    +.    .........+   +.    +.++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence            37899996 999999999999988  489999988765331    11    1112222222   22    3467899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+..+.+..|..-...+++.+.++.+...++.+|
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99997544445566789999999999999999986444555544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.33  E-value=1.4e-07  Score=69.60  Aligned_cols=38  Identities=29%  Similarity=0.459  Sum_probs=35.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||.|+||+|.+|+++++.|++.|++|++.+|++++.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            99999999999999999999999999999999876543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.30  E-value=4.7e-08  Score=70.15  Aligned_cols=110  Identities=15%  Similarity=0.089  Sum_probs=69.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC----e-E--EEEEc--CCCCCCC------CCCCCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH----S-V--RALVR--RTSDISG------LPSEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~----~-V--~~~~r--~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||.|+||+|++|++++..|+..+.    . +  .++.-  ..++.+.      .......+.+...    .+..+.+++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   80 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFKD   80 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhccc
Confidence            6899999999999999999988752    1 1  11111  1111110      0000123333322    223456789


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCc-eEEEEc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~~s  114 (229)
                      +|+||-+||.......+..+.++.|+.-...+.+.+.++.+.. .++.+|
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999998655445667789999999999999998874333 444444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.30  E-value=1.6e-06  Score=61.36  Aligned_cols=105  Identities=17%  Similarity=0.290  Sum_probs=74.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC-------CCC--CCCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      ||.|+|+ |.+|+.++..|+.+|  .+++++++++++.+       ...  ....+.....|   .    +.++++|+||
T Consensus         8 KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~----~~l~daDvvv   79 (148)
T d1ldna1           8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---Y----DDCRDADLVV   79 (148)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---G----GGTTTCSEEE
T ss_pred             eEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---H----HHhccceeEE
Confidence            7999996 999999999999987  48999998764311       000  01122333333   3    3467899999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      .++|.......+..+.+..|..-...+++.+.++.+...++.+|
T Consensus        80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99997554445567789999999999999999986545566554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.30  E-value=4.6e-06  Score=60.61  Aligned_cols=108  Identities=15%  Similarity=0.051  Sum_probs=71.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCC---------CCCCCCCCCeEEEEccCCChhhHHhhcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD---------ISGLPSEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~---------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      ||.||||+|.||++++..|+..+.       ++.+++.+...         ++.... .....+..    ..+..+.+++
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~----~~~~~~~~~~  100 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI----GIDPYEVFED  100 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE----ESCHHHHTTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccc----cccchhhccC
Confidence            799999999999999999987531       44455543321         111111 12221111    1234466789


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCc-eEEEEc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~iv~~s  114 (229)
                      +|+||-++|.......+..+.++.|..-...+.+++.++.+.. +++.+|
T Consensus       101 aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            9999999998655556677899999999999999999874333 455544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.29  E-value=3.3e-07  Score=64.62  Aligned_cols=106  Identities=16%  Similarity=0.171  Sum_probs=74.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CC----CCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      ||.|+|+ |.+|++++..|+.+|  .+++++++++++.+.    +.    ..........+  +.    +.++++|+||-
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVVi   75 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVVI   75 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEEE
Confidence            7899996 999999999999998  489999987643211    10    00122222222  22    23578999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +||.......+..+.++.|..-...+++.+.++.....++.+|
T Consensus        76 taG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          76 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             ecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9998654445566889999999999999999886434455444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.28  E-value=2.7e-06  Score=59.68  Aligned_cols=106  Identities=17%  Similarity=0.140  Sum_probs=74.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCC--CCC----CC----CCCCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS--DIS----GL----PSEGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~--~~~----~~----~~~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      ||.|+|++|.+|++++..|..++  .++.+++.+..  ..+    ++    ......+....|   +++    ++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~----~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED----TAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG----GTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH----hhhcCEE
Confidence            79999999999999999999998  37888885321  111    01    011223333333   332    4789999


Q ss_pred             EEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+||.......+..+.++.|..-...+.+.+.++.....++.+|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            999997554445667889999999999999999986444555554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.24  E-value=4.5e-07  Score=65.88  Aligned_cols=71  Identities=17%  Similarity=0.194  Sum_probs=55.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|+|.|+ |.+|+.+++.|.++|++|++++|+.++.+.+... ........+..+.......+...|.++.+.
T Consensus         4 ~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           4 SVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             EEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence            7999985 9999999999999999999999998765554332 234455567777778888888888888654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.22  E-value=1.1e-06  Score=62.70  Aligned_cols=109  Identities=17%  Similarity=0.077  Sum_probs=72.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCC--------CCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      +||.|+|+ |.+|+.++..|...+ .++++++.++++.+....        ...-..+.+    ..+.++.++++|+||-
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~----~~~~~~~~~~adiVvi   82 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA----EYSYEAALTGADCVIV   82 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE----ECSHHHHHTTCSEEEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec----cCchhhhhcCCCeEEE
Confidence            48999996 999999999888888 589999887653221100        000000111    1223456688999999


Q ss_pred             eCcccCCCC-----CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           72 TAALVEPWL-----PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        72 ~a~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +++......     .+..+.+..|..-...+++.+.++.....++.+|
T Consensus        83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            998743221     2445689999999999999999986444455444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.19  E-value=8.3e-07  Score=61.67  Aligned_cols=70  Identities=21%  Similarity=0.305  Sum_probs=57.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +++|.|. |-+|+++++.|.++|++|++++.++++.+.+... ....+.+|.++++.+.++ ++++|.||-+.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~-~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT-CSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh-CCcceeeecccchhhhccCCccccEEEEEc
Confidence            5788875 9999999999999999999999988766655443 456788999999999887 67888887554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=98.18  E-value=1.4e-06  Score=61.28  Aligned_cols=107  Identities=19%  Similarity=0.156  Sum_probs=67.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCC----CCC-----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      +||.|+|+ |.+|++++..|+.++ .++++++.++++...    +..     .....+...  .|++    .+++.|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEEE
Confidence            48999995 999999999998887 589999887653211    000     001111111  1232    246889999


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+||.......+..+.+..|..-...+++.+.++.+...++.+|
T Consensus        75 itag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          75 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            99997543334456778999999999999999986444454443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.16  E-value=3.2e-06  Score=59.87  Aligned_cols=107  Identities=17%  Similarity=0.205  Sum_probs=70.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC----CC-----CCCeEEEEccCCChhhHHhhcCCccEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~----~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi   70 (229)
                      +||.|+|+ |.+|++++..|..++ .++.++++++++.+..    ..     .........+  +.    +.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence            58999995 999999998888877 6899999876532211    00     0111222211  22    3357899999


Q ss_pred             EeCcccCC---CC--CCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           71 HTAALVEP---WL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        71 ~~a~~~~~---~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      -+++....   +.  .+....+..|..-...+++.+.++.+...++.+|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99996322   11  1345678999999999999999986444455544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.14  E-value=5.6e-06  Score=58.92  Aligned_cols=110  Identities=15%  Similarity=0.059  Sum_probs=69.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCCCC--CCCC------CCCCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD--ISGL------PSEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||.|+||+|.+|++++..|+..+.       ++.+.+.+...  .+.+      ........+..    ..+..+.+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccCC
Confidence            7999999999999999999986541       34444443211  1100      00012221111    1123356789


Q ss_pred             ccEEEEeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCce-EEEEc
Q 027007           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTS  114 (229)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-iv~~s  114 (229)
                      +|+||-++|.......+..+.++.|..-...+.+.+.++.+..- ++.+|
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999975544445567799999999999999888643333 44444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.12  E-value=1.3e-06  Score=62.62  Aligned_cols=106  Identities=19%  Similarity=0.175  Sum_probs=73.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCCCCC----CC----CCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      ||.|+|+ |.+|+.++..|+.+|.  ++++++++++..+.    +.    .......+..  .|.+    .++++|+||.
T Consensus        22 KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~--~d~~----~~~~adiVVi   94 (160)
T d1i0za1          22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD--KDYS----VTANSKIVVV   94 (160)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC--SSGG----GGTTCSEEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec--cchh----hcccccEEEE
Confidence            7999995 9999999999999984  89999987543210    00    0011122221  1232    3578999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +||.......+..+.++.|..-...+++.+.+.....-++.+|
T Consensus        95 tAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          95 TAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9997554445566789999999999999999886444555555

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.98  E-value=6.1e-06  Score=59.23  Aligned_cols=65  Identities=23%  Similarity=0.287  Sum_probs=44.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.| .|.+|+.+++.|.++|++|++.+|+++..+.......+....       +-.+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-------QDLSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-------SCGGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceee-------eecccccccccccccC
Confidence            9999997 599999999999999999999999865433221111111111       1123567899988654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.95  E-value=1.5e-05  Score=56.75  Aligned_cols=106  Identities=21%  Similarity=0.233  Sum_probs=72.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCC-------CCC-CCCCeEEEEccCCChhhHHhhcCCccEEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------GLP-SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~-------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   71 (229)
                      ||.|+|+ |.+|+.++..|+.+|  .+++++++++++..       ... .......+..+  |.    +.++++|+||.
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~--d~----~~~~~adivvi   93 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK--DY----NVSANSKLVII   93 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES--SG----GGGTTEEEEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc--ch----hhhccccEEEE
Confidence            7999995 999999999999998  48999998754311       000 11111222221  23    23478999999


Q ss_pred             eCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +||.......+..+.++.|..-...+++.+.++.....++.+|
T Consensus        94 tag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          94 TAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             CCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9997554445556779999999999988888876444555554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.93  E-value=2.6e-06  Score=60.09  Aligned_cols=106  Identities=19%  Similarity=0.200  Sum_probs=68.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCCCCCC----CC-----CCCCeEEEEccCCChhhHHhhcCCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP-----SEGALELVYGDVTDYRSLVDACFGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d~v   69 (229)
                      .||.|+| +|.+|+.++..|+.+|  .+++++++++++.+.    +.     ..........   |.    +.++++|+|
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALADADVV   73 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTCSEE
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CH----HHhccccEE
Confidence            3789999 5999999999999887  589999987653211    00     0011222222   33    335789999


Q ss_pred             EEeCcccCC----CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        70 i~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |-+||....    ...+-.+.++.|..-...+.+.+.++.+...++.+|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            999996321    112334568899999999999998886444555544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=3.6e-05  Score=57.95  Aligned_cols=71  Identities=18%  Similarity=0.226  Sum_probs=51.4

Q ss_pred             CEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH----H
Q 027007            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (229)
Q Consensus         1 m~vlItGg----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~----~   60 (229)
                      |+||||+|                ||.+|.+|++++..+|++|+++.-.....  .+  ..+..+.  +...++.    .
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--~p--~~~~~~~--~~t~~~m~~~~~   80 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--TP--PFVKRVD--VMTALEMEAAVN   80 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--CC--TTEEEEE--CCSHHHHHHHHH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--cc--cccccce--ehhhHHHHHHHH
Confidence            58899988                78999999999999999999998754321  11  2445444  3344443    4


Q ss_pred             hhcCCccEEEEeCcccC
Q 027007           61 DACFGCHVIFHTAALVE   77 (229)
Q Consensus        61 ~~~~~~d~vi~~a~~~~   77 (229)
                      +.+++.|++|++|++.+
T Consensus        81 ~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          81 ASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHGGGCSEEEECCBCCS
T ss_pred             hhhccceeEeeeechhh
Confidence            44568999999999854

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=9.5e-06  Score=58.65  Aligned_cols=71  Identities=20%  Similarity=0.192  Sum_probs=49.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|++|+++++++++.+.+... +++.+ .|..+.....+..+++|+||++.|
T Consensus        30 ~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l-Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          30 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             EEEEEeccccchhhhhhhhccccccccccccccccccccccc-cccee-eehhhhhhhhhccccccccccccc
Confidence            699999999999999999989999999999887654433221 22211 133333333334467999999765

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.75  E-value=6.3e-06  Score=61.30  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=48.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEcc-------------CCChhhHHhhcCCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD-------------VTDYRSLVDACFGCH   67 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D-------------~~~~~~~~~~~~~~d   67 (229)
                      |||.|.| .|++|..++..|+++|++|++++.++++.+.+... ...+.+.+             +.-..+..++++++|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g-~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG-KSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc-CCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            9999996 79999999999999999999999876543322110 00000000             111123445566789


Q ss_pred             EEEEeCcc
Q 027007           68 VIFHTAAL   75 (229)
Q Consensus        68 ~vi~~a~~   75 (229)
                      +++-|.+.
T Consensus        79 ~i~i~VpT   86 (202)
T d1mv8a2          79 VSFICVGT   86 (202)
T ss_dssp             EEEECCCC
T ss_pred             EEEEecCc
Confidence            99988765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.72  E-value=1.2e-05  Score=58.38  Aligned_cols=97  Identities=15%  Similarity=0.036  Sum_probs=60.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC-------CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +||.|+|+ |.+|..++..|.++|++|++.+|++++.+.+...       +.............+..++++++|+||-+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            58999996 9999999999999999999999976433221110       011111111111234566778999999774


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      ..       +         ....+++.++++...+.+|.++
T Consensus        81 ~~-------~---------~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          81 PA-------I---------HHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             CG-------G---------GHHHHHHHHGGGCCTTCEEEES
T ss_pred             ch-------h---------HHHHHHHHhhhccCCCCEEEEe
Confidence            21       1         1345667777775445555543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.71  E-value=1.2e-05  Score=58.45  Aligned_cols=72  Identities=21%  Similarity=0.224  Sum_probs=46.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi~~a~   74 (229)
                      +|||+||+|++|...++.....|.+|+.+.+++++.+.......-+.+.-+-.+ ++..+..  +++|+||.+.|
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CCSCCEEEEEECST
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhH-HHHHHHhhccCcCEEEEcCC
Confidence            699999999999999998889999999999988765433222112222211111 2222222  35899999976

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.70  E-value=5.3e-05  Score=55.05  Aligned_cols=98  Identities=16%  Similarity=0.194  Sum_probs=61.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCC---CC--CCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLP---SE--GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.| +|-.|.+++..|++.|++|++..|..+.  .+.+.   .+  -.......++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            9999999 5999999999999999999999885321  11100   00  011111122334567888889999998765


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEcc
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS  115 (229)
                      ..                .+...+++.+.+....+.+|.++.
T Consensus        80 ps----------------~~~~~~~~~l~~~l~~~~ii~~tk  105 (180)
T d1txga2          80 ST----------------DGVLPVMSRILPYLKDQYIVLISK  105 (180)
T ss_dssp             CG----------------GGHHHHHHHHTTTCCSCEEEECCC
T ss_pred             ch----------------hhhHHHHHhhccccccceeccccc
Confidence            21                123455666666654445555443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=3.1e-05  Score=55.17  Aligned_cols=37  Identities=43%  Similarity=0.539  Sum_probs=33.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||+|.|+ |.+|+.++..|++.|++|++++|++.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            99999997 99999999999999999999999876433

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=1.7e-05  Score=49.30  Aligned_cols=36  Identities=39%  Similarity=0.430  Sum_probs=32.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      ++|||+||+|++|...++.+...|++|+++++++++
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            479999999999999999888999999999988654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1.4e-05  Score=57.84  Aligned_cols=71  Identities=21%  Similarity=0.268  Sum_probs=47.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChh---hHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~--~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|++|+++++++++.+.+.+.+.-+.+  |.++.+   .+.+..  +.+|+++.+.|
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi--~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVF--NHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEEeccccccccccccccccCcccccccccccccccccccCccccc--ccccccHHHHhhhhhccCCceEEeeccc
Confidence            699999999999999999999999999999876543322211112222  444433   223332  24899998875

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.52  E-value=2.7e-05  Score=56.65  Aligned_cols=73  Identities=19%  Similarity=0.206  Sum_probs=49.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEE-ccCCChhhHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~--~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.....|++|+++++++++.+.+...+.-+.+. -|-...+.+.+..  +++|+|+++.|
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            7999999999999999999999999999998866543322222222222 2332334443333  35999999876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=5.2e-05  Score=55.17  Aligned_cols=73  Identities=12%  Similarity=0.173  Sum_probs=56.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCC-------CCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|+|.|+ |+.|++++..|...|. +++++.|++++.+.+.       ..........|+.+.+++.+.+..+|+|||+.
T Consensus        20 ~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~T   98 (182)
T d1vi2a1          20 TMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGT   98 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceecccc
Confidence            6899995 8999999999999985 7889999876543211       11123345678889999988889999999998


Q ss_pred             cc
Q 027007           74 AL   75 (229)
Q Consensus        74 ~~   75 (229)
                      ..
T Consensus        99 p~  100 (182)
T d1vi2a1          99 KV  100 (182)
T ss_dssp             ST
T ss_pred             CC
Confidence            65

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=3.7e-05  Score=54.30  Aligned_cols=71  Identities=20%  Similarity=0.233  Sum_probs=54.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC---CCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL---PSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +++|.|. |-+|..++++|.++|++|++++.++++....   ....++.++.+|.+|++.++++ ++++|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            4788885 8999999999999999999999876431110   0113688999999999998776 46789888664

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.47  E-value=3.4e-05  Score=56.00  Aligned_cols=71  Identities=15%  Similarity=0.237  Sum_probs=49.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~--~~~d~vi~~a~   74 (229)
                      +|||+||+|.+|...++.+...|++|+++++++++.+.+...+.-+.+  |-.+.   +.+.+..  +++|+++.+.|
T Consensus        28 ~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi--~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          28 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVG--DSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEE--ETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCCcccccchhhccccccceeeecccccccccccccccccc--cCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            699999999999999999888999999999876544333222222222  33333   3444443  35999999876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.44  E-value=8.9e-06  Score=58.15  Aligned_cols=68  Identities=24%  Similarity=0.333  Sum_probs=51.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|||+|+ |.+|+.+++.|...|. +++++.|+.++.+.+...-+.     ...+.+++.+.+.++|+||.+.+.
T Consensus        26 ~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-----~~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          26 TVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-----EAVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-----EECCGGGHHHHHHTCSEEEECCSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-----ccccchhHHHHhccCCEEEEecCC
Confidence            7999996 9999999999999997 688999886654433221111     233466788888899999999764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=1.1e-05  Score=58.04  Aligned_cols=38  Identities=32%  Similarity=0.376  Sum_probs=33.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (229)
                      +|||+||+|++|...++.....|++|+++.+++++.+.
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence            59999999999999999888889999999998876544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.37  E-value=1.1e-05  Score=57.15  Aligned_cols=65  Identities=17%  Similarity=0.104  Sum_probs=46.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.+.| +|-+|+++++.|.+.|+++++.+|+.++.+.+....++       .-..+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~-------~~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLAL-------PYAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTC-------CBCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccce-------eeechhhhhhhccceeeeec
Confidence            9999997 79999999999999999999999986554433211011       11123445567899888664

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.33  E-value=1.1e-05  Score=57.66  Aligned_cols=64  Identities=25%  Similarity=0.306  Sum_probs=47.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||-|.| .|.+|+.+++.|+++|++|++.+|++++.+.+... ...  .     .++..++.+++|+||-+.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~--~-----~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAE--T-----ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCE--E-----CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh-hhh--h-----cccHHHHHhCCCeEEEEc
Confidence            9999998 69999999999999999999999987654433221 111  1     123445566789998775

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.33  E-value=0.00055  Score=47.70  Aligned_cols=69  Identities=10%  Similarity=0.093  Sum_probs=39.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      |||.|.||||++|+.+++.|+++.    .++..++.+...-+........ ....+..+.+    .++++|+++.+.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~-~~~~~~~~~~----~~~~~DvvF~alp   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDA-GMLHDAFDIE----SLKQLDAVITCQG   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCC-CBCEETTCHH----HHTTCSEEEECSC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcc-eeeecccchh----hhccccEEEEecC
Confidence            999999999999999999887643    3555554433211111100010 0111222332    2468899998864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=4.9e-05  Score=54.94  Aligned_cols=71  Identities=15%  Similarity=0.235  Sum_probs=49.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh---hhHHhhcC--CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d~vi~~a~   74 (229)
                      +|+|+||+|.+|...++.....|++|+++++++++.+.+...+.-+.+  |.++.   +.+.++-.  .+|+|+.+.+
T Consensus        31 ~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi--~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          31 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVI--NYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEE--ECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            699999999999999999888999999999987654432221122233  44443   33444332  4899999876

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.23  E-value=7.6e-05  Score=53.46  Aligned_cols=72  Identities=14%  Similarity=0.020  Sum_probs=48.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |.+|...++.+...|++|+++++++++.+...+.+.-+.+.- ..+.+..++..+.+|+++.+.+.
T Consensus        30 ~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~-~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          30 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIAT-LEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEG-GGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeec-cchHHHHHhhhcccceEEEEecC
Confidence            6899985 999999998888889999999998876554322111122321 11233444555679999998764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00016  Score=50.81  Aligned_cols=33  Identities=33%  Similarity=0.520  Sum_probs=31.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||.|+||.|.+|+.+++.|.++||+|.+.+|+.
T Consensus        11 kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2          11 KIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            799999999999999999999999999998864

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00015  Score=51.87  Aligned_cols=71  Identities=21%  Similarity=0.157  Sum_probs=51.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |.+|...++.+...|++++++++++++.+.....+.-+.  .|..+.+......+++|++|.+.+.
T Consensus        33 ~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~--i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          33 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV--VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE--EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEE--EECchhhHHHHhcCCCceeeeeeec
Confidence            6899985 999999999888899999999988765432211111122  3566676666667789999999863

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.00022  Score=49.74  Aligned_cols=34  Identities=26%  Similarity=0.437  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g---~~V~~~~r~~   34 (229)
                      |+|.|.||||++|+.+++.|.+++   .++..+..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            899999999999999999997665   4666665443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.00066  Score=46.18  Aligned_cols=68  Identities=21%  Similarity=0.228  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeCc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAA   74 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~   74 (229)
                      |||.|.|++|-+|+.+++.+.++|+++++. +++..  +.+.   ... +..|.+.|+.+.+.++     +.-+|+=+.|
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~~~---~~D-VvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EELD---SPD-VVIDFSSPEALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EECS---CCS-EEEECSCGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HHhc---cCC-EEEEecCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence            999999999999999999999999997755 33221  1111   112 3558999888766654     3456654444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=4.9e-05  Score=55.11  Aligned_cols=37  Identities=38%  Similarity=0.432  Sum_probs=33.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      +|||+||+|++|...++.....|++|+++++++++.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~   70 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH
Confidence            6899999999999999988899999999999876644

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00072  Score=47.09  Aligned_cols=68  Identities=10%  Similarity=0.062  Sum_probs=41.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      ||-|.||||++|+.+++.|+++.    .+++...++.......... .-.....++.+.++    ++++|++|.+++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-~~~~~~~~~~~~~~----~~~~DivF~a~~   74 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDLEA----LKALDIIVTCQG   74 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-CCceeeecccchhh----hhcCcEEEEecC
Confidence            68999999999999999877653    4667666554332221110 00111223334333    467899998874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.04  E-value=5.8e-05  Score=53.24  Aligned_cols=64  Identities=19%  Similarity=0.240  Sum_probs=43.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.+.| +|-+|+++++.|++.| ++|++.+|++++.+.+.....+... .|   .+    .+.++|+||-+.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~---~~----~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-AT---LP----ELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SS---CC----CCCTTSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cc---cc----cccccceEEEec
Confidence            9999998 5999999999998887 9999999987655443322122221 12   11    135678888653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.02  E-value=0.00018  Score=51.91  Aligned_cols=70  Identities=16%  Similarity=0.122  Sum_probs=49.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCC-CeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|-++| -|.+|+++++.|+++|++|++.+|++++.+++.... .... .......+++.+.+..+|.+|-+.
T Consensus         4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~-~~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTK-VLGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSS-CEECSSHHHHHHHBCSSCEEEECS
T ss_pred             cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccc-ccchhhhhhhhhhhcccceEEEec
Confidence            467888 699999999999999999999999886544321110 0000 012346778888888899888775

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.0016  Score=43.00  Aligned_cols=64  Identities=22%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCC-CCCCCCeEEEEccCCChhhHHhhcC--CccEEE
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi   70 (229)
                      ||.|.| +|.+|+-++.+..+-|+++++++.+++.... +    .-+++.+|..|.+.+.++..  ++|+|-
T Consensus        13 kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v----a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          13 RVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV----AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             EEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG----SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc----CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            789999 5999999999999999999999987653221 2    12678899999999988764  578874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00032  Score=50.16  Aligned_cols=72  Identities=18%  Similarity=0.109  Sum_probs=48.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-----CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-----FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~d~vi~~a~   74 (229)
                      +|+|.|+ |.+|...++.+...|+ +|+++++++.+++...+.+.-+.+..+-.++.+..+.+     .++|++|.+.|
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G  106 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG  106 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEeccC
Confidence            6889875 9999999999999998 79999988765443222112233444444555544433     25899999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.92  E-value=0.00018  Score=52.03  Aligned_cols=73  Identities=18%  Similarity=0.130  Sum_probs=46.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhH----Hhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----VDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~----~~~~--~~~d~vi~~a~   74 (229)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.+.-+.+.-.=.+..+.    .+..  .++|+||.+.|
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG  109 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG  109 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSS
T ss_pred             EEEEECC-CccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeecCC
Confidence            6899985 8999999999999997 7999999876543322111112332221232222    2222  24899999986


Q ss_pred             c
Q 027007           75 L   75 (229)
Q Consensus        75 ~   75 (229)
                      .
T Consensus       110 ~  110 (182)
T d1vj0a2         110 D  110 (182)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.91  E-value=0.00057  Score=48.65  Aligned_cols=35  Identities=23%  Similarity=0.583  Sum_probs=29.7

Q ss_pred             CE-EEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCCCC
Q 027007            1 MK-ILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD   36 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~~~g~--~V~~~~r~~~~   36 (229)
                      || |+|.| .|.+|..+++.|.+.|+  +|++.+++++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            65 99997 69999999999999985  78888887643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.91  E-value=0.0002  Score=48.77  Aligned_cols=68  Identities=18%  Similarity=0.161  Sum_probs=51.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhh-cCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a   73 (229)
                      +++|.| .|-+|+.+++.|.  +++|++++.++++.+.+.. .++.++.+|.++++.+.++ +.+++.+|-+.
T Consensus         2 HivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           2 HVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             EEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            678888 5889999999984  5678888887765443322 3688999999999998876 45788888553

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.86  E-value=9.8e-05  Score=52.58  Aligned_cols=64  Identities=27%  Similarity=0.355  Sum_probs=45.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +||-+.| .|-+|+++++.|+++|++|.+.+|+.++.+.+...        ......+..++++.+|+++-+.
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA--------GASAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT--------TCEECSSHHHHHTSCSEEEECC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh--------hccccchhhhhccccCeeeecc
Confidence            3788887 79999999999999999999999986543332211        1111224456667889888775

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.00013  Score=52.45  Aligned_cols=67  Identities=18%  Similarity=0.253  Sum_probs=45.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++|+|.| +|+.+++++..|.+.|.+|+++.|+.++.+.+..    ...+..  .+..+.     ...++|+|||+...
T Consensus        19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCSGGG-----TTCCCSEEEECCSC
T ss_pred             CEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--cccccc-----cccccceeeccccc
Confidence            3799999 5999999999999999999999998765443211    112222  222111     12468999999764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.83  E-value=0.00041  Score=49.39  Aligned_cols=73  Identities=19%  Similarity=0.103  Sum_probs=47.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccC--CChhhHHhhc-----CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV--TDYRSLVDAC-----FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~-----~~~d~vi~~a~   74 (229)
                      +|+|+| +|.+|...++.+...|.+|+++++++++.+.......-..+..|-  .+.+++.+.+     .++|++|.++|
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g  107 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSG  107 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSC
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeecCC
Confidence            689997 799999999999999999999999876544222111112222222  2233332322     35899999986


Q ss_pred             c
Q 027007           75 L   75 (229)
Q Consensus        75 ~   75 (229)
                      .
T Consensus       108 ~  108 (170)
T d1e3ja2         108 N  108 (170)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.80  E-value=0.002  Score=46.40  Aligned_cols=60  Identities=25%  Similarity=0.241  Sum_probs=46.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++.|.| .|.||+.+++.+..-|.+|++.+|.+....              ..-.++++++++.+|+|+.++..
T Consensus        43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~--------------~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP--------------WRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS--------------SCCBSCSHHHHTTCSEEEECCCC
T ss_pred             ceEEEec-cccccccceeeeeccccccccccccccccc--------------eeeeechhhhhhccchhhccccc
Confidence            3688998 688999999999999999999998753211              11223567888999999877654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.66  E-value=0.00041  Score=49.41  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|+|+|++|.+|...++.+...| .+|+++++++++.+.+...+.-+.+..+-.|. +.+.+..  +.+|++|.+++.
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~  107 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS  107 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred             EEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhccccc
Confidence            68999999999999999988888 58888888765433222111113333332232 2333332  348999999863

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.61  E-value=0.00018  Score=51.43  Aligned_cols=64  Identities=13%  Similarity=0.251  Sum_probs=42.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |+.+++++..|.+.|. ++.++.|+.++.+.+........+  +  +.     ...++|+|||+.+.
T Consensus        19 ~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~--~--~~-----~~~~~DliINaTpi   83 (167)
T d1npya1          19 KVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI--N--SL-----ENQQADILVNVTSI   83 (167)
T ss_dssp             CEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE--S--CC-----TTCCCSEEEECSST
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh--h--cc-----cccchhhheecccc
Confidence            6999985 9999999999999995 799999987654433211111111  1  10     01468999998654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.003  Score=40.10  Aligned_cols=66  Identities=20%  Similarity=0.353  Sum_probs=45.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC--CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ||+|.|. |--|.++++.|.++|++|++.+.+...  .+.+..  ...+..... +.+    .+.++|.||-+.|+
T Consensus         7 ~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~-~~~----~~~~~d~vi~SPGi   74 (93)
T d2jfga1           7 NVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSL-NDE----WLMAADLIVASPGI   74 (93)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBC-CHH----HHHHCSEEEECTTS
T ss_pred             EEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeeccc-chh----hhccCCEEEECCCC
Confidence            6899996 788999999999999999999986542  222222  333344332 222    23567999988775

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.56  E-value=5.3e-05  Score=55.53  Aligned_cols=70  Identities=20%  Similarity=0.239  Sum_probs=46.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      ||.|.| +|..|.+++..|.+.|++|++.+|+++..+.+..       .+.+. +.-++.-..++.++++++|+||-+.
T Consensus         9 KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~iiiav   85 (189)
T d1n1ea2           9 KAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEIILFVI   85 (189)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCEEECS
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEEEEcC
Confidence            599999 5999999999999999999999987542211100       00111 0112222345677788899998764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.54  E-value=0.00048  Score=49.49  Aligned_cols=70  Identities=14%  Similarity=0.130  Sum_probs=45.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC----CCeEEEEccCCChhhHHhhcCCccEEEEe
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   72 (229)
                      |||-|+| .|.+|+++++.|+++|++|++.+|++++.+.+.+.    ....... ...+.+++...+...+.++-+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALIL   75 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchh-hhhhhhHHHHhcccceEEEEe
Confidence            8999998 79999999999999999999999987653322110    0000111 123455666666666555544

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.002  Score=45.54  Aligned_cols=87  Identities=23%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEE-cCCCC-CC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSD-IS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~-r~~~~-~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |||.|.|++|-+|+++++.+.+. +.++++.. |.... .. .+.......  ..++.-..+...+++.+|++|....  
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~~~~~~~~~~DViIDFs~--   80 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTR--   80 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSC--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc--cCCceeeccHHHHhcccceEEEecc--
Confidence            68999999999999999988876 57765543 43221 11 110000000  0111112233455678899986542  


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcC
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (229)
                            +        .++...++.|.+++
T Consensus        81 ------p--------~~~~~~~~~a~~~~   95 (162)
T d1diha1          81 ------P--------EGTLNHLAFCRQHG   95 (162)
T ss_dssp             ------H--------HHHHHHHHHHHHTT
T ss_pred             ------H--------HHHHHHHHHHHhcc
Confidence                  1        24567778887774

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.47  E-value=0.0005  Score=49.24  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=46.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCC----CCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|+|.| +|+.+++++..|.+.+.+|+++.|+.++.+.+..    ...+..+..|-       ..+..+|+|||+.+.
T Consensus        20 ~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-------~~~~~~diiIN~tp~   89 (171)
T d1p77a1          20 HVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-------IPLQTYDLVINATSA   89 (171)
T ss_dssp             EEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-------CCCSCCSEEEECCCC
T ss_pred             EEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-------ccccccceeeecccc
Confidence            688888 5899999999999988999999998765443211    11233333331       124678999999764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.37  E-value=0.0033  Score=42.09  Aligned_cols=34  Identities=21%  Similarity=0.333  Sum_probs=30.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +++|.| +|++|.+++..|.++|.+|+++.+.+.-
T Consensus        32 ~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          32 RLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             eEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence            678888 5999999999999999999999998643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.35  E-value=0.0032  Score=41.74  Aligned_cols=33  Identities=30%  Similarity=0.431  Sum_probs=30.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        24 ~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          24 SLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             eEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            6889984 99999999999999999999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.32  E-value=0.0022  Score=44.64  Aligned_cols=64  Identities=16%  Similarity=0.219  Sum_probs=44.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||-|.| .|.+|+++++.|+++|++|++.++..++....... .     ..+  .++..++++++|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-~-----~~~--~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-T-----VGV--TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-H-----HTC--EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-c-----ccc--cccHHHHHhhcCeEEEEe
Confidence            9999997 79999999999999999999888765432211100 0     011  112345567899998775

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.26  E-value=0.0017  Score=45.83  Aligned_cols=71  Identities=23%  Similarity=0.168  Sum_probs=43.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC-hhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~d~vi~~a   73 (229)
                      +|+|.|+ |.+|...++.+...|++|+++++++++.+...+.+..+.+..+-.| .+.+.+...+.+.+|-++
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~  101 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTA  101 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECC
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCccccccc
Confidence            6889875 9999999998888999999999987654432222222333222122 233333334555555554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.24  E-value=0.00031  Score=51.05  Aligned_cols=73  Identities=25%  Similarity=0.212  Sum_probs=42.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCCCCCCCCCC-CCCeEEEEccCCC-hhhHHhhcC-CccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPS-EGALELVYGDVTD-YRSLVDACF-GCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~-~~~~~~~~~D~~~-~~~~~~~~~-~~d~vi~~a~   74 (229)
                      +|||+||+|.+|+..++.....|.++++ ++.++++...+.. ...-..+.-.-.+ .+.+.++.. ++|+|+.+.|
T Consensus        33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             EEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            5999999999999999988888976554 4544333221111 0111222222222 223333332 5999998875

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.23  E-value=0.00056  Score=49.58  Aligned_cols=32  Identities=28%  Similarity=0.557  Sum_probs=26.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVR   32 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r   32 (229)
                      +||.|.||||+.|..+++.|.++- .++..+..
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            489999999999999999998864 56665543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.16  E-value=0.0035  Score=41.68  Aligned_cols=33  Identities=24%  Similarity=0.413  Sum_probs=29.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.|| |++|.+++..|.+.|.+|+++.|...
T Consensus        24 ~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          24 KIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             EEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            6888884 99999999999999999999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0051  Score=40.69  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=29.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.| +|++|..++..|.+.|.+|+++.|.+.
T Consensus        23 ~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          23 RVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             EEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            688888 599999999999999999999998764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.14  E-value=0.0034  Score=41.96  Aligned_cols=32  Identities=25%  Similarity=0.515  Sum_probs=28.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      +++|.| +|++|..+|..|.+.|++|+++.|.+
T Consensus        34 ~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          34 EAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             EEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            578888 59999999999999999999998865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.14  E-value=0.005  Score=41.16  Aligned_cols=34  Identities=15%  Similarity=0.276  Sum_probs=30.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +++|.| +|+||..++..|.+.|.+|+++.|.+.-
T Consensus        25 ~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          25 RLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             eEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence            688999 4999999999999999999999987643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.12  E-value=0.0074  Score=40.32  Aligned_cols=33  Identities=30%  Similarity=0.480  Sum_probs=29.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +|+|.| +|++|..++..|.+.|.+|+++.+.+.
T Consensus        32 ~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          32 NVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            678887 599999999999999999999998754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.04  E-value=0.0012  Score=47.13  Aligned_cols=108  Identities=14%  Similarity=0.088  Sum_probs=63.6

Q ss_pred             CEEEEEcCCChHHHHH--HHHHHHC----CCeEEEEEcCCCCCCCCC---------CCCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGRL--CHALLKQ----GHSVRALVRRTSDISGLP---------SEGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~l--~~~l~~~----g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      |||.|.|| |.+|..+  ...|+..    +.+++++|.++++++...         .....++     ....+..+++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i-----~~~td~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKF-----EKTMNLDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEE-----EEESCHHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEE-----EEeCChhhcccC
Confidence            89999996 8888653  3344432    469999999865432100         0011222     222345667899


Q ss_pred             ccEEEEeCcccCC---------------------CCCC-----chhhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           66 CHVIFHTAALVEP---------------------WLPD-----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        66 ~d~vi~~a~~~~~---------------------~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      +|+|+++++....                     +..+     -......|+.-...+++.+.++.+...++++|
T Consensus        77 ad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          77 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999865210                     0000     00012357888888888888886544666655

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.00  E-value=0.0017  Score=46.18  Aligned_cols=73  Identities=18%  Similarity=0.143  Sum_probs=45.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|+|.| +|.+|...++.+...|. .|+++++++++.+........+.+..+=.+.+.+.+...  ++|++|.++|.
T Consensus        35 ~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          35 YVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             EEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            578887 59999999998888885 667777776544332222223344333222333444332  48999999863

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.98  E-value=0.0016  Score=46.49  Aligned_cols=73  Identities=18%  Similarity=0.145  Sum_probs=43.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeE-EEEEcCCCCCCCCCCCCCeEEEEccCCCh-hhHHhhcC-CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSV-RALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACF-GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~-~~d~vi~~a~~   75 (229)
                      +|+|.|+ |.+|...++.+...|+++ +++++++.+.+...+.+..+++..+-.|. +.+.++.. ++|++|.+.|.
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence            6899986 999999999888888765 45566554433222112223443332222 22333322 48999999863

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.91  E-value=0.0016  Score=46.18  Aligned_cols=72  Identities=15%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCC--CCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ||+|.|+ |-.|..-++...+-|.+|+++|.+.++++.+...  ..++.   -..+.+.+.+.++++|+||.++-+..
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~aalipG  107 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAVLVPG  107 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhccCcEEEEeeecCC
Confidence            7899994 9999999999999999999999987655433211  12222   34567888999999999999986543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.90  E-value=0.006  Score=40.20  Aligned_cols=33  Identities=33%  Similarity=0.496  Sum_probs=29.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.| +|++|..+|..|.+.|++|+++.|.+.
T Consensus        23 ~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          23 HLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            677887 599999999999999999999988754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.89  E-value=0.0026  Score=46.48  Aligned_cols=62  Identities=18%  Similarity=-0.001  Sum_probs=45.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|.|.| .|.||+.+++.|..-|.+|++.++......           ..+....+++.++++++|+|+.++..
T Consensus        45 ~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~-----------~~~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          45 VVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPEL-----------EKKGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHH-----------HHTTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             eEEEec-ccccchhHHHhHhhhcccccccCccccccc-----------ccceeeeccccccccccccccccCCc
Confidence            688888 799999999999999999999886542111           11122344677788889988877643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.87  E-value=0.019  Score=40.46  Aligned_cols=63  Identities=16%  Similarity=0.230  Sum_probs=40.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEEc-CCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      |||.|.| +|.+|+..++.|.+. +.+++++.. +.+.....      ...     ...+......++|+|+.+...
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~~------~~~-----~~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKT------PVF-----DVADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSS------CEE-----EGGGGGGTTTTCSEEEECSCT
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccccc------ccc-----cchhhhhhccccceEEEeCCC
Confidence            3688998 799999999998875 577765544 43322111      111     122444556789999887654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.87  E-value=0.0012  Score=47.36  Aligned_cols=73  Identities=12%  Similarity=0.086  Sum_probs=46.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCC-hhhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|+|.| +|.+|...++.+...|+ +|+++++++.+.+...+.+..+.+.-+-.+ .+.+.+...  ++|++|.++|.
T Consensus        30 ~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          30 SVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             EEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCC
Confidence            689997 59999999999888896 699998876553332211112333221112 333444443  48999999873

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0078  Score=40.29  Aligned_cols=33  Identities=21%  Similarity=0.466  Sum_probs=30.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        24 ~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          24 RSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             EEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            6889995 99999999999999999999999764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.87  E-value=0.0036  Score=47.45  Aligned_cols=33  Identities=27%  Similarity=0.393  Sum_probs=30.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+|+|| |.-|...|..|.++|++|+++.++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            89999995 9999999999999999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.01  Score=42.77  Aligned_cols=63  Identities=19%  Similarity=0.036  Sum_probs=45.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      +++.|.| .|.||+.+++.+..-|.+|+..++........            ....++++++++.+|+|+-++...
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~------------~~~~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGN------------ATQVQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTT------------CEECSCHHHHHHHCSEEEECCCSS
T ss_pred             eEEEEee-cccchhhhhhhcccccceEeeccccccchhhh------------hhhhhhHHHHHhhccceeecccCC
Confidence            3677886 89999999999999999999998764322111            111235667788899888776543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.83  E-value=0.004  Score=39.26  Aligned_cols=69  Identities=14%  Similarity=0.145  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC-CCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      |||-++|-+|-==++||+.|.++|+.|.+.|+...... .+.. .++.+..+.  +++.    ++++|.||.+.++.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-LGIPIFVPH--SADN----WYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTCCEESSC--CTTS----CCCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-CCCeEEeee--cccc----cCCCCEEEEecCcC
Confidence            89988986543334689999999999999998753211 1221 234444331  2222    35789999998863

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.82  E-value=0.0065  Score=45.17  Aligned_cols=32  Identities=31%  Similarity=0.486  Sum_probs=29.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||+|+|| |..|..+|..|.++|++|+++.|+.
T Consensus         8 kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           8 RVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            7999994 9999999999999999999999864

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.80  E-value=0.0045  Score=44.34  Aligned_cols=31  Identities=32%  Similarity=0.575  Sum_probs=26.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV   31 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~   31 (229)
                      |||.|.||||++|..+++.|.++ ..++..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            48999999999999999999987 56765543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.78  E-value=0.009  Score=39.19  Aligned_cols=66  Identities=21%  Similarity=0.297  Sum_probs=44.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|||.|| |-+|.+-++.|++.|++|++++..... ...+....++++++.+..+ ++    +.+++.|+.+.
T Consensus        14 ~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-~d----l~~~~lv~~at   80 (113)
T d1pjqa1          14 DCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-TL----LDSCWLAIAAT   80 (113)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-GG----GTTCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-HH----hCCCcEEeecC
Confidence            7999995 889999999999999999999875432 1112222456666655532 22    45677777553

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.78  E-value=0.0061  Score=40.72  Aligned_cols=31  Identities=32%  Similarity=0.404  Sum_probs=28.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      +++|.| +|+||.++|..|.+.|.+|+++.|+
T Consensus        22 ~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          22 KTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            578888 5999999999999999999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.77  E-value=0.012  Score=39.06  Aligned_cols=33  Identities=27%  Similarity=0.326  Sum_probs=30.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.| +|+||..++..|.+.|.+|+++.|...
T Consensus        24 ~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          24 KLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             eEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            688999 599999999999999999999998754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.75  E-value=0.0021  Score=45.73  Aligned_cols=111  Identities=8%  Similarity=-0.005  Sum_probs=59.9

Q ss_pred             CEEEEEcCC-ChHHHHHHHHHHHC----CCeEEEEEcCCCC--CCCCCC-------CCCeEEEEccCCChhhHHhhcCCc
Q 027007            1 MKILVSGAS-GYLGGRLCHALLKQ----GHSVRALVRRTSD--ISGLPS-------EGALELVYGDVTDYRSLVDACFGC   66 (229)
Q Consensus         1 m~vlItGg~-G~iG~~l~~~l~~~----g~~V~~~~r~~~~--~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   66 (229)
                      |||.|.||+ .+.+..++..+...    ..++++++.++++  .+.+..       ......   .+....+..++++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~---~~~~~td~~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPI---EIHLTLDRRRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCC---EEEEESCHHHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCc---eeeecCCchhhcCCC
Confidence            799999973 34556665555443    2489999987642  111000       001111   111122335567899


Q ss_pred             cEEEEeCcccCCCC------------------CCch--hhhHhhHHHHHHHHHHHHhcCCCceEEEEc
Q 027007           67 HVIFHTAALVEPWL------------------PDPS--RFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (229)
Q Consensus        67 d~vi~~a~~~~~~~------------------~~~~--~~~~~n~~~~~~l~~~~~~~~~~~~iv~~s  114 (229)
                      |+||.+|+......                  ..+.  .....|+.-...+++.+.++.+...++.+|
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            99999998632100                  0000  113457777777888888876444555544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.73  E-value=0.0094  Score=43.40  Aligned_cols=60  Identities=23%  Similarity=0.139  Sum_probs=44.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|.|.| .|.||+.+++.|..-|.+|++.++...+....    .+        +..++.++++.+|+|+.+..
T Consensus        47 tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----~~--------~~~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          47 TVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP----DF--------DYVSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT----TC--------EECCHHHHHHHCSEEEECCC
T ss_pred             eeeeee-cccccccccccccccceeeeccCCccchhhhc----ch--------hHHHHHHHHHhcccceeeec
Confidence            678888 79999999999999999999998865432111    11        22356677788898887654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.73  E-value=0.0048  Score=46.69  Aligned_cols=31  Identities=23%  Similarity=0.354  Sum_probs=28.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|.+|..+|.+|+++|.+|++++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            89999 49999999999999999999999864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.01  Score=41.83  Aligned_cols=55  Identities=20%  Similarity=0.234  Sum_probs=43.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ++|+|.|.+.-+|+.++..|.++|+.|+.+.....                      ++.+..+++|+||.++|..+
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------~l~~~~~~ADivI~a~G~p~   92 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------NLRHHVENADLLIVAVGKPG   92 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------CHHHHHHHCSEEEECSCCTT
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------hhHHHHhhhhHhhhhccCcc
Confidence            37899999999999999999999999987754321                      23344567899999998643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0066  Score=43.99  Aligned_cols=33  Identities=21%  Similarity=0.438  Sum_probs=30.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      ||.|.|+ |.+|+.++..++..|++|++.+++++
T Consensus         6 kvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           6 HVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            7899996 99999999999999999999999865

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.66  E-value=0.0083  Score=44.85  Aligned_cols=34  Identities=24%  Similarity=0.214  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +||+|+|| |..|..++..|+++|++|+++.|+++
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            58999995 99999999999999999999998754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.64  E-value=0.0044  Score=44.14  Aligned_cols=73  Identities=15%  Similarity=0.036  Sum_probs=46.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|+|.| +|.+|...++.+...|. +|+++++++++++...+.+..+.+...-.|  .++..+..  .++|++|.+.+.
T Consensus        30 ~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~  107 (174)
T d1p0fa2          30 TCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR  107 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCC
Confidence            689998 59999999999999985 788888887665433222222333211112  22333322  358999988763

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.58  E-value=0.0041  Score=45.22  Aligned_cols=64  Identities=17%  Similarity=0.089  Sum_probs=45.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++.|.| .|-||+.+++.|..-|.+|+..++........         ..++...++++++++.+|+|+.+...
T Consensus        51 tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~---------~~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          51 TLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER---------ALGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH---------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eEEEec-cccccccceeeeeccccceeeccCcccccchh---------hhccccccchhhccccCCEEEEeecc
Confidence            678887 79999999999999999999998864321100         01122234667778888988876644

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.063  Score=39.95  Aligned_cols=32  Identities=28%  Similarity=0.351  Sum_probs=27.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~   34 (229)
                      ||+|.| .|++|++++..|+..|. +++++|.+.
T Consensus        32 ~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          32 RVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            799999 69999999999999995 788887653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.54  E-value=0.0056  Score=44.45  Aligned_cols=71  Identities=10%  Similarity=0.053  Sum_probs=45.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCC--C-hhhHHhhcC--CccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVT--D-YRSLVDACF--GCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~--~~d~vi~~a~~   75 (229)
                      +|+|.| +|.+|...++.+...|. +|+++++++++++..... +...+. |-.  + .+.+.++..  ++|++|.+.|.
T Consensus        28 tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~-Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          28 TVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred             EEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhc-cccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECccc
Confidence            689997 59999888888777775 788888876654432222 222222 222  2 233444433  58999999874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.54  E-value=0.0076  Score=40.24  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=30.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   37 (229)
                      +++|.| +|+||..++..|.+.|.+|+++.|.+.-+
T Consensus        27 ~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          27 KLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             EEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             eEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            678888 59999999999999999999999986543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.48  E-value=0.0048  Score=44.20  Aligned_cols=74  Identities=18%  Similarity=0.165  Sum_probs=50.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEcc----------------------CCChhhH
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD----------------------VTDYRSL   59 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D----------------------~~~~~~~   59 (229)
                      +|+|.|+ |-.|..-++-...-|.+|+++|.++++.+.+... .-.++..+                      ....+.+
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l-~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l  108 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV  108 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh-hcceEEEeccccccccccccchhhcCHHHHHHHHHHH
Confidence            6899995 9999999999999999999999987754433211 11111111                      1124456


Q ss_pred             HhhcCCccEEEEeCcccC
Q 027007           60 VDACFGCHVIFHTAALVE   77 (229)
Q Consensus        60 ~~~~~~~d~vi~~a~~~~   77 (229)
                      .+.++++|+||-++-+..
T Consensus       109 ~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         109 LKELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHTTCSEEEECCCCTT
T ss_pred             HHHHHhhhhheeeeecCC
Confidence            677789999999886543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.43  E-value=0.0023  Score=45.47  Aligned_cols=69  Identities=9%  Similarity=0.118  Sum_probs=40.3

Q ss_pred             CEEEEEcCCChHHHH-HHHHHHHC-----CCeEEEEEcCCCCCCCCCC---------CCCeEEEEccCCChhhHHhhcCC
Q 027007            1 MKILVSGASGYLGGR-LCHALLKQ-----GHSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFG   65 (229)
Q Consensus         1 m~vlItGg~G~iG~~-l~~~l~~~-----g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   65 (229)
                      +||.|.||++ +|.. ++..++.+     +.+++++|.++++++....         ....+...     ..+..+++++
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~   77 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD   77 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCC
Confidence            3788999844 4543 33444432     2489999988765331100         01112221     2245566789


Q ss_pred             ccEEEEeCcc
Q 027007           66 CHVIFHTAAL   75 (229)
Q Consensus        66 ~d~vi~~a~~   75 (229)
                      +|+||.+++.
T Consensus        78 AD~Vvitag~   87 (167)
T d1u8xx1          78 VDFVMAHIRV   87 (167)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCc
Confidence            9999999986

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.40  E-value=0.015  Score=39.29  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=30.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +++|.| +|++|.+++..|.+.|.+|+++.+.+.-
T Consensus        37 ~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          37 RLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             EEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            688998 5999999999999999999999987643

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.39  E-value=0.0092  Score=40.02  Aligned_cols=33  Identities=18%  Similarity=0.318  Sum_probs=29.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +++|.| +|+||..++..|.+.|.+|+++.+.+.
T Consensus        28 ~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          28 KLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            688998 599999999999999999999998754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.38  E-value=0.005  Score=43.77  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=45.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEE-EccCCC-hhhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELV-YGDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~D~~~-~~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |++|...++.+...| .+|+++++++++.+........+.+ ..|-.+ .+...+..  .++|++|.+.|.
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCc
Confidence            6899998 779999999999988 5889898887764433222222222 122222 22222222  368999999864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.32  E-value=0.0087  Score=43.24  Aligned_cols=36  Identities=36%  Similarity=0.433  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      |||.|.| .|++|..++..| ++|++|+++|-++.+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~   36 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVD   36 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHH
Confidence            9999997 799999999766 57999999998765433

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.025  Score=39.96  Aligned_cols=53  Identities=17%  Similarity=0.203  Sum_probs=42.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   76 (229)
                      +|+|.|.+.-+|+.++..|.++|+.|+.+.....                      ++.+..++.|++|.++|..
T Consensus        41 ~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~----------------------~l~~~~~~aDivi~a~G~~   93 (170)
T d1a4ia1          41 HAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA----------------------HLDEEVNKGDILVVATGQP   93 (170)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------SHHHHHTTCSEEEECCCCT
T ss_pred             eEEEEecCCccchHHHHHHHhccCceEEEecccc----------------------cHHHHHhhccchhhccccc
Confidence            6899999999999999999999999998765421                      1234456889999888764

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.22  E-value=0.012  Score=42.42  Aligned_cols=33  Identities=21%  Similarity=0.263  Sum_probs=28.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~   34 (229)
                      |||+|.|| |++|..++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            99999995 89999999999886  46888888753

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.19  E-value=0.012  Score=41.91  Aligned_cols=33  Identities=27%  Similarity=0.412  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~   33 (229)
                      |||.|.||||++|..+++.|.++- .++..+..+
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            489999999999999999998864 566666443

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.18  E-value=0.14  Score=34.15  Aligned_cols=85  Identities=19%  Similarity=0.180  Sum_probs=53.9

Q ss_pred             EEEEEcCC---ChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccC
Q 027007            2 KILVSGAS---GYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         2 ~vlItGg~---G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      +|.|.|+|   +..|..+.+.|.+.| ++|+.+..+.+...             .+.-..++.++-..+|.++-+...  
T Consensus        10 sIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~-------------G~~~y~sl~dlp~~vDlvvi~vp~--   74 (129)
T d2csua1          10 GIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ-------------GVKAYKSVKDIPDEIDLAIIVVPK--   74 (129)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET-------------TEECBSSTTSCSSCCSEEEECSCH--
T ss_pred             eEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC-------------CeEeecchhhcCCCCceEEEecCh--
Confidence            68999998   889999999988766 68888865432211             111223333334568887755421  


Q ss_pred             CCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                                    ..+..+++.+.+.+ .+.++.+|+.
T Consensus        75 --------------~~~~~~~~~~~~~g-~~~~vi~s~G   98 (129)
T d2csua1          75 --------------RFVKDTLIQCGEKG-VKGVVIITAG   98 (129)
T ss_dssp             --------------HHHHHHHHHHHHHT-CCEEEECCCS
T ss_pred             --------------HHhHHHHHHHHHcC-CCEEEEeccc
Confidence                          22455677777775 5677777654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.074  Score=35.03  Aligned_cols=71  Identities=14%  Similarity=0.097  Sum_probs=50.5

Q ss_pred             EEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEE
Q 027007            2 KILVSGASG----------YLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G----------~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   69 (229)
                      ||||.|++.          +-+.+.+++|.+.|++++++..+++....-..  -..-+...-...+.+.++++  ++|.|
T Consensus         6 kvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E~p~~i   83 (121)
T d1a9xa4           6 KIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIEKPKGV   83 (121)
T ss_dssp             EEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHhCCCEE
Confidence            799999754          56888999999999999999988765443221  22234445556788877764  68988


Q ss_pred             EEeCc
Q 027007           70 FHTAA   74 (229)
Q Consensus        70 i~~a~   74 (229)
                      +-..|
T Consensus        84 i~~~G   88 (121)
T d1a9xa4          84 IVQYG   88 (121)
T ss_dssp             ECSSS
T ss_pred             Eeehh
Confidence            75544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.11  E-value=0.0064  Score=43.89  Aligned_cols=65  Identities=15%  Similarity=0.017  Sum_probs=45.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++.|.| .|.||+++++.|..-|.+|...++.........        ...+....++.++++++|+|+.+...
T Consensus        46 ~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          46 HVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK--------ELNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH--------HHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             ceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc--------cccccccCCHHHHHHhccchhhcccc
Confidence            677777 799999999999999999999998642211000        11123345667778899988766643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.07  E-value=0.0074  Score=42.95  Aligned_cols=73  Identities=15%  Similarity=0.109  Sum_probs=45.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEccCCC--hhhHHhh--cCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDA--CFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~--~~~~d~vi~~a~~   75 (229)
                      +|+|+| +|.||...++.+...|. +|++.++++++.+...+.+..+.+...-.|  .+...+.  -.++|++|.++|.
T Consensus        31 ~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~  108 (174)
T d1e3ia2          31 TCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT  108 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred             EEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEeccc
Confidence            689997 69999999999999997 677788876654322221222333222111  2222222  2369999999873

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.014  Score=47.49  Aligned_cols=33  Identities=36%  Similarity=0.468  Sum_probs=28.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~   34 (229)
                      +||||.|+ |++|+++++.|+..|. ++.++|.+.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            47999996 7899999999999995 788888763

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.98  E-value=0.027  Score=39.78  Aligned_cols=77  Identities=16%  Similarity=0.095  Sum_probs=49.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC-CCCCCCCCCeEEEEccC--CChhhHHhhcCCccEEEEeCcccC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDV--TDYRSLVDACFGCHVIFHTAALVE   77 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~d~vi~~a~~~~   77 (229)
                      ++++|.|-+.-+|+.++..|.++|..|+....+... ........-......|+  ...+.+++....+|+||..+|..+
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~p~  109 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSEN  109 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCCCc
Confidence            379999999999999999999999999877654211 00000000000011222  235667887788999998887643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.93  E-value=0.035  Score=37.07  Aligned_cols=71  Identities=21%  Similarity=0.305  Sum_probs=51.2

Q ss_pred             EEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC--CccEE
Q 027007            2 KILVSGASG----------YLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (229)
Q Consensus         2 ~vlItGg~G----------~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v   69 (229)
                      ||||.|++.          +-+.+.+++|.+.|++++++..+++....-..  -..-+...-.+.+++.++++  ++|.|
T Consensus         9 kvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lYfePlt~e~v~~Ii~~E~pd~i   86 (127)
T d1a9xa3           9 SILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--MADATYIEPIHWEVVRKIIEKERPDAV   86 (127)
T ss_dssp             EEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEECSCCCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceeeeecCCHHHHHHHHHHhCcCCe
Confidence            799999754          56888999999999999999888765322111  12234555667888888775  69998


Q ss_pred             EEeCc
Q 027007           70 FHTAA   74 (229)
Q Consensus        70 i~~a~   74 (229)
                      +-..|
T Consensus        87 l~~~G   91 (127)
T d1a9xa3          87 LPTMG   91 (127)
T ss_dssp             ECSSS
T ss_pred             EEEee
Confidence            86654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.92  E-value=0.0093  Score=42.88  Aligned_cols=33  Identities=21%  Similarity=0.298  Sum_probs=30.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      ||.|.|+ |.+|+.++..++..|++|++.+++++
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            6889996 99999999999999999999999864

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.90  E-value=0.017  Score=40.16  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=21.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH   25 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~   25 (229)
                      ||.|.||||++|.++++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            789999999999999999888753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.84  E-value=0.032  Score=36.70  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=29.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +++|.| +|++|..++..|.+.|.+|+++.|.+.-
T Consensus        24 ~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          24 TVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence            677887 5999999999999999999999997643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0052  Score=43.22  Aligned_cols=64  Identities=19%  Similarity=0.194  Sum_probs=45.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.| .|.+|+.+|+.+...|.+|++.+.++-+.  ++.       ..|--....+++++...|++|-+.|.
T Consensus        26 ~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a--l~A-------~~dG~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          26 VAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA--LQA-------AMEGYEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH--HHH-------HHTTCEECCHHHHTTTCSEEEECSSC
T ss_pred             EEEEec-cccccHHHHHHHHhCCCeeEeeecccchh--HHh-------hcCceEeeehhhhhhhccEEEecCCC
Confidence            577777 89999999999999999999998875321  100       11222233456777788988877763

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.70  E-value=0.0052  Score=43.54  Aligned_cols=72  Identities=15%  Similarity=0.105  Sum_probs=42.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCCCCCCCeEEEEc-cC-CChhhHHhhc--CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYG-DV-TDYRSLVDAC--FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-D~-~~~~~~~~~~--~~~d~vi~~a~   74 (229)
                      +|+|.|+ |++|...++.+...|. .|+++++++++.+...+.+.-+.+.. +- .+.+...+..  .++|++|.+.|
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G  107 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG  107 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence            6899986 6899999999988995 56666666655432221111223322 11 1122222221  35899999986

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.68  E-value=0.029  Score=38.05  Aligned_cols=70  Identities=24%  Similarity=0.290  Sum_probs=41.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC-----CccEEEEeC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a   73 (229)
                      ||.|.|++|-+|+.+++.+.+. ++++.+..-..+....... .... +..|.+.|+.+.+.++     +.-.|+=+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~-~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT-TTCS-EEEECCCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc-ccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEecc
Confidence            7899999999999999987765 5776654322211111110 1122 3458888877655443     345565333

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.64  E-value=0.0027  Score=47.01  Aligned_cols=27  Identities=33%  Similarity=0.490  Sum_probs=24.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVR   28 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~   28 (229)
                      |||+|.|| |-+|..+|.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            99999994 9999999999999997654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.63  E-value=0.01  Score=42.24  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=46.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEE-ccCCC-hhhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVY-GDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~D~~~-~~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|+|+| +|++|...++.+...| .+|+++++++++++...+.+..+.+. -|-.+ .+.+.+..  .++|++|.+.+.
T Consensus        32 tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          32 TCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGH  109 (176)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCC
T ss_pred             EEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCCc
Confidence            588997 5999999999999999 58999999887654322211222222 22222 23333322  369999998763

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.13  Score=39.27  Aligned_cols=26  Identities=35%  Similarity=0.370  Sum_probs=24.0

Q ss_pred             CChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            9 SGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         9 ~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||-.|.++++++..+|++|+++.+..
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecCC
Confidence            78999999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.55  E-value=0.0094  Score=42.82  Aligned_cols=63  Identities=19%  Similarity=0.071  Sum_probs=43.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++.|.| .|.||+.+++.+..-|.+|+..++...+....         ..+ ....+++++++++|+|+-+...
T Consensus        46 ~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~---------~~~-~~~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          46 TVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA---------QLG-IELLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH---------HHT-CEECCHHHHHHHCSEEEECCCC
T ss_pred             eeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHh---------hcC-ceeccHHHHHhhCCEEEEcCCC
Confidence            566666 79999999999999999999998764321100         001 1233566778889988876644

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.48  E-value=0.029  Score=41.96  Aligned_cols=34  Identities=32%  Similarity=0.398  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~   35 (229)
                      |+|+|+|| |..|..++..|.+.|. +|+++.|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            78999995 9999999999999995 8999988753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.45  E-value=0.024  Score=40.29  Aligned_cols=33  Identities=21%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~   35 (229)
                      ||+|.|| |..|...|..|.++|+ +|+++.|...
T Consensus         6 kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           6 KIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             EEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            7999995 9999999999999998 5999998753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.44  E-value=0.026  Score=43.91  Aligned_cols=33  Identities=33%  Similarity=0.638  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      +||+|+| +|.-|..+|..|+++|++|.++.++.
T Consensus         3 KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           3 KKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            4799999 59999999999999999999998865

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.41  E-value=0.011  Score=41.43  Aligned_cols=70  Identities=19%  Similarity=0.125  Sum_probs=43.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCC---hhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD---YRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|.| +|.+|...++.+...|++|+++++++++.+..... +.+.+. |-.+   .+.+.+..++.+.+|-+++
T Consensus        30 ~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~-Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          30 WVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GADLVV-NPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSEEE-CTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             EEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc-Ccceec-ccccchhhhhcccccCCCceEEeecC
Confidence            688886 59999999999989999999999877654332221 222222 2222   2234444456666665553

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.29  E-value=0.0097  Score=43.04  Aligned_cols=65  Identities=14%  Similarity=-0.012  Sum_probs=44.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      ++.|.| .|.||+.+++.+..-|.+|+..++.........        .......+++.++++.+|+|+.++..
T Consensus        49 tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          49 TLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA--------SYQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH--------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceEEee-cccchHHHHHHHHhhccccccccccccccchhh--------cccccccCCHHHHHhhCCeEEecCCC
Confidence            577887 799999999999999999999887543211100        00112234677788889988766644

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.034  Score=39.56  Aligned_cols=32  Identities=22%  Similarity=0.319  Sum_probs=29.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||+|.| +|..|...+..|+++||+|+++.+.+
T Consensus        45 ~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          45 NLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             EEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            799999 59999999999999999999999875

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.26  E-value=0.019  Score=43.65  Aligned_cols=33  Identities=39%  Similarity=0.394  Sum_probs=30.0

Q ss_pred             CE--EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MK--ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~--vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||  |+|.|| |-.|..++..|.+.|++|+++.+++
T Consensus         1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            65  999995 7999999999999999999999875

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.20  E-value=0.019  Score=36.55  Aligned_cols=66  Identities=18%  Similarity=0.271  Sum_probs=43.3

Q ss_pred             EEEEEcCCChHH-HHHHHHHHHCCCeEEEEEcCCCCC-CCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLG-GRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG-~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +|.+.|- |++| ++||+.|.++|++|.+.|+..... +.+.. .++.+..++  +++.    +++.|.||.+.++
T Consensus        10 ~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v~~g~--~~~~----i~~~d~vV~S~AI   77 (96)
T d1p3da1          10 QIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKIYIGH--AEEH----IEGASVVVVSSAI   77 (96)
T ss_dssp             EEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEEEESC--CGGG----GTTCSEEEECTTS
T ss_pred             EEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeEEECC--cccc----CCCCCEEEECCCc
Confidence            6777774 4455 778999999999999999874321 11111 245555544  2322    3578999988876

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.14  E-value=0.038  Score=38.02  Aligned_cols=32  Identities=16%  Similarity=0.315  Sum_probs=27.3

Q ss_pred             EEEE-cCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVS-GASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlIt-Gg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ++|. .|+|++|..++..|++.|++|+++.+.+
T Consensus        42 vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          42 VVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             EEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             eEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4444 3569999999999999999999999875

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.13  E-value=0.022  Score=34.67  Aligned_cols=33  Identities=27%  Similarity=0.255  Sum_probs=28.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      +|.|.| +|.+|+-++.+-.+-|++|.+++-+++
T Consensus         3 ~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           3 QVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            588998 599999999999999999999987654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.00  E-value=0.027  Score=42.47  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=28.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|..|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 59999999999999999999999864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.95  E-value=0.029  Score=40.76  Aligned_cols=31  Identities=23%  Similarity=0.314  Sum_probs=28.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|.-|...|..|+++|++|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78898 69999999999999999999998874

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.92  E-value=0.033  Score=41.77  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=29.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      .||+|+| +|.-|...|.+|+++|++|+++.+++
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4799999 59999999999999999999998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.70  E-value=0.035  Score=38.07  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=28.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      ++||+|| |.+|.+-++.|++.|.+|++++..
T Consensus        15 rvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          15 RILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            7999997 889999999999999999999654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.70  E-value=0.031  Score=42.67  Aligned_cols=32  Identities=28%  Similarity=0.584  Sum_probs=28.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~   34 (229)
                      +|+|+|| |-+|..+|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5899994 9999999999999995 699999874

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.65  E-value=0.033  Score=42.81  Aligned_cols=32  Identities=25%  Similarity=0.440  Sum_probs=28.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      .|+|+| +|.-|..+|+.|++.|++|.++.++.
T Consensus         3 dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            489999 59999999999999999999998764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.40  E-value=0.053  Score=37.93  Aligned_cols=33  Identities=15%  Similarity=0.255  Sum_probs=27.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      .+|+|.| +|++|..++..|.+.|.+|.++.+..
T Consensus         4 ~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           4 DNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            3688888 59999999999999998877766554

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.11  Score=37.42  Aligned_cols=72  Identities=21%  Similarity=0.165  Sum_probs=43.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCC-CCC-CC-------CCCeEEEE-ccCCChhhHHhhc-CCccEE
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGL-PS-------EGALELVY-GDVTDYRSLVDAC-FGCHVI   69 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~-~~-------~~~~~~~~-~D~~~~~~~~~~~-~~~d~v   69 (229)
                      |||++.| ++..|..+.+.|.+.|++|.++.-.+++. ... ..       ..++.++. .++.+.+.++.+- .++|++
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            9999996 57789999999999999997765433221 110 00       12344443 4555554443332 268888


Q ss_pred             EEeC
Q 027007           70 FHTA   73 (229)
Q Consensus        70 i~~a   73 (229)
                      +...
T Consensus        80 i~~g   83 (203)
T d2blna2          80 FSFY   83 (203)
T ss_dssp             EEES
T ss_pred             eeee
Confidence            7664

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=93.35  E-value=0.041  Score=39.29  Aligned_cols=35  Identities=9%  Similarity=0.161  Sum_probs=29.8

Q ss_pred             EEEE-EcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            2 KILV-SGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlI-tGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +++| +||+|.+|...++.....|.+|+++.|+.++
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            4666 6899999999999888889999999987654

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=93.34  E-value=0.069  Score=42.43  Aligned_cols=33  Identities=33%  Similarity=0.456  Sum_probs=27.1

Q ss_pred             CEEEEEcC------CChHH---HHHHHHHHHCCCeEEEEEcC
Q 027007            1 MKILVSGA------SGYLG---GRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg------~G~iG---~~l~~~l~~~g~~V~~~~r~   33 (229)
                      ||||+.+.      +|++|   .+|+++|+++||+|+++...
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            99999875      57777   55789999999999998743

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.02  E-value=0.043  Score=41.83  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=29.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||+|+| +|..|...|..|+++|++|+++.++.
T Consensus        32 kV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          32 HVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999 59999999999999999999998764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.91  E-value=0.22  Score=38.04  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=27.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      +|+|-| .|-+|+++++.|.+.|.+|+.++-.
T Consensus        38 tvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          38 TFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            577776 7999999999999999999988754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.91  E-value=0.059  Score=37.13  Aligned_cols=31  Identities=26%  Similarity=0.326  Sum_probs=26.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||+|.|| |++|.+++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7899995 899999999985 578999998754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.89  E-value=0.032  Score=39.22  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=44.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCCCCCCCeEEEEc-cCCC-hhhHHhhc--CCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYG-DVTD-YRSLVDAC--FGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~-D~~~-~~~~~~~~--~~~d~vi~~a~~   75 (229)
                      +|+|.|+ |.+|...+.++...| .+|+++++++++++...+.+..+.+.. +-.+ .+.+.+..  .++|++|.+.|.
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCC
Confidence            6889985 678888777777777 478888888776554332222334432 2111 22333332  369999999863

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.1  Score=43.45  Aligned_cols=31  Identities=16%  Similarity=0.186  Sum_probs=26.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~   33 (229)
                      +|+|.|+ |++|+++++.|+..| .+++++|.+
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            7999985 899999999999999 478888764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.67  E-value=0.076  Score=38.98  Aligned_cols=32  Identities=22%  Similarity=0.393  Sum_probs=29.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      +|+|.| +|..|...|..|+++|++|+++.++.
T Consensus        51 ~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          51 SVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             eEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            689999 49999999999999999999998765

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.60  E-value=0.11  Score=32.36  Aligned_cols=32  Identities=25%  Similarity=0.270  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      |||||.| +|+=-.+|+..|.++..++++.--+
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence            9999999 5777788999999888998887443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.48  E-value=0.067  Score=37.00  Aligned_cols=32  Identities=22%  Similarity=0.250  Sum_probs=27.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~   34 (229)
                      ||+|.|| |++|-.++..|.+.+  .+|+++.+++
T Consensus         4 rivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           4 KVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             cEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            7999995 999999999999987  4788887765

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.33  E-value=0.12  Score=33.68  Aligned_cols=33  Identities=15%  Similarity=0.290  Sum_probs=26.2

Q ss_pred             EEEEEcCCChHHHHHHHHHH---HCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALL---KQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~---~~g~~V~~~~r~~~   35 (229)
                      +++|.|| |++|..++..|.   .+|.+|+++.|.+.
T Consensus        22 ~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          22 RVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             EEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             eEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            6889996 999999996554   45678999998754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.33  E-value=0.0053  Score=43.22  Aligned_cols=69  Identities=13%  Similarity=0.061  Sum_probs=40.6

Q ss_pred             CEEEEEcCCChHHHHHHHH-HHH-C----CCeEEEEEcCCCCCCCCCC------CCCeEEEEccCCChhhHHhhcCCccE
Q 027007            1 MKILVSGASGYLGGRLCHA-LLK-Q----GHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFGCHV   68 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~-l~~-~----g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~   68 (229)
                      |||.|.|| |.+|..++-. |+. .    ..++.++|.++++......      ........   +  .+..+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~---t--~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---S--DTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---C--SSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE---e--cCcccccCCCCE
Confidence            99999998 4466665532 222 1    3689999987654321100      01122221   1  123456789999


Q ss_pred             EEEeCcc
Q 027007           69 IFHTAAL   75 (229)
Q Consensus        69 vi~~a~~   75 (229)
                      ||.+|+.
T Consensus        75 VVita~~   81 (162)
T d1up7a1          75 VIFQFRP   81 (162)
T ss_dssp             EEECCCT
T ss_pred             EEEeccc
Confidence            9999986

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.06  E-value=0.017  Score=42.98  Aligned_cols=65  Identities=18%  Similarity=0.282  Sum_probs=41.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   74 (229)
                      +|+|-| .|-+|+++++.|.+.|.+|++.+.+...+..+....+.     +..+++++.  -.++|+++-||-
T Consensus        41 ~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~-----~~~~~~~~~--~~~cDIl~PcA~  105 (230)
T d1leha1          41 AVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGA-----DAVAPNAIY--GVTCDIFAPCAL  105 (230)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCC-----EECCGGGTT--TCCCSEEEECSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCC-----cccCCcccc--cccccEeccccc
Confidence            566666 89999999999999999999887654332211110011     122233322  136899999985

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.05  E-value=0.074  Score=38.74  Aligned_cols=32  Identities=22%  Similarity=0.336  Sum_probs=28.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~   34 (229)
                      +|+|+| +|.-|...|..|.++|+ +|+++.++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            689999 49999999999999995 799998764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.96  E-value=0.09  Score=39.88  Aligned_cols=32  Identities=31%  Similarity=0.395  Sum_probs=28.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      ||+|+| +|.-|...|.+|.++|++|+++-.+.
T Consensus         7 kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           7 KVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            699999 59999999999999999999997653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.69  E-value=0.098  Score=38.41  Aligned_cols=31  Identities=23%  Similarity=0.266  Sum_probs=28.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+|| |..|...+..|+++|++|+++.++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889994 8999999999999999999998864

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=91.55  E-value=0.37  Score=34.58  Aligned_cols=32  Identities=28%  Similarity=0.534  Sum_probs=27.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      |||++.| ++.++..+.+.|.+.|+++.++.-.
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~   35 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQ   35 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeC
Confidence            8999998 5788999999999999998776543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.53  E-value=0.19  Score=32.52  Aligned_cols=34  Identities=21%  Similarity=0.290  Sum_probs=27.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~---~g~~V~~~~r~~~~   36 (229)
                      +++|.|| |++|.+++..|.+   .|.+|+++.|.+.-
T Consensus        20 ~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          20 RALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             EEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             eEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            6889995 9999999976554   48899999987543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.25  E-value=0.62  Score=34.35  Aligned_cols=31  Identities=26%  Similarity=0.278  Sum_probs=26.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      +|+|-| .|-+|+++++.|.+.|.+|+.++-.
T Consensus        33 ~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          33 TVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            577776 8999999999999999999888754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=0.13  Score=39.28  Aligned_cols=31  Identities=29%  Similarity=0.382  Sum_probs=28.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|.-|...|..|+++|++|+++.++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            68888 59999999999999999999998764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.75  E-value=0.2  Score=33.52  Aligned_cols=34  Identities=32%  Similarity=0.532  Sum_probs=27.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSD   36 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~----~g~~V~~~~r~~~~   36 (229)
                      +++|.|| |++|..++..|.+    .|.+|+++.+.+.-
T Consensus        39 ~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~   76 (137)
T d1m6ia2          39 SITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGN   76 (137)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred             EEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence            6888884 9999999988853    58999999887543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.71  E-value=0.12  Score=40.05  Aligned_cols=33  Identities=21%  Similarity=0.187  Sum_probs=24.9

Q ss_pred             CEEEE-EcCCC-hH--HHHHHHHHHHCCCeEEEEEcC
Q 027007            1 MKILV-SGASG-YL--GGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         1 m~vlI-tGg~G-~i--G~~l~~~l~~~g~~V~~~~r~   33 (229)
                      ||||+ ++||+ -|  =.+|+++|.++||+|+.++..
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~   37 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPP   37 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEECh
Confidence            99987 55553 23  456899999999999998743

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=90.70  E-value=0.13  Score=40.10  Aligned_cols=30  Identities=23%  Similarity=0.196  Sum_probs=27.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      |+|+| +|+-|..+|.+|+++|++|.++-+.
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            68888 6999999999999999999999885

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.68  E-value=0.15  Score=39.14  Aligned_cols=33  Identities=30%  Similarity=0.384  Sum_probs=29.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      .|+|+|| |..|..++.+|.++|.+|+++.+.++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4889995 99999999999999999999988653

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.19  Score=36.19  Aligned_cols=33  Identities=33%  Similarity=0.481  Sum_probs=28.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |||++.| ++..|..+.+.|.++|++|.++.-.+
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            9999997 67889999999999999998766443

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.17  E-value=0.15  Score=35.76  Aligned_cols=35  Identities=17%  Similarity=0.262  Sum_probs=29.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (229)
                      +|+|.| +|+.+++++.+|.+.| +|+++.|+.++.+
T Consensus        20 ~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~   54 (177)
T d1nvta1          20 NIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAE   54 (177)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             EEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence            689998 5889999999997766 9999999876544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.11  E-value=0.22  Score=34.09  Aligned_cols=34  Identities=26%  Similarity=0.371  Sum_probs=27.8

Q ss_pred             CE-EEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCC
Q 027007            1 MK-ILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~   34 (229)
                      || |.|.|+||.||.....-+.+.  .++|++++-+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            65 999999999999999877765  47888886553

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.86  E-value=0.28  Score=31.86  Aligned_cols=59  Identities=27%  Similarity=0.348  Sum_probs=39.4

Q ss_pred             EEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vlItGg~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      +|.|.|++   +-.|..+.+.|.+.|++|+.+..+.+...             .+.-..++.++-..+|.++-+.
T Consensus         3 sIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~-------------G~~~y~sl~~lp~~~D~vvi~v   64 (116)
T d1y81a1           3 KIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE-------------GLKCYRSVRELPKDVDVIVFVV   64 (116)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-------------TEECBSSGGGSCTTCCEEEECS
T ss_pred             EEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc-------------CccccccchhccccceEEEEEe
Confidence            68899987   56899999999999999887754322111             2222334444445678776553

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.38  E-value=0.31  Score=32.81  Aligned_cols=81  Identities=19%  Similarity=0.138  Sum_probs=51.2

Q ss_pred             EEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcccCC
Q 027007            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (229)
                      +|.|.|++   +-.|..+++.|.+.|++|+.+..+.....             ...-..++.++-..+|.++-+..    
T Consensus        21 sIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~-------------G~~~~~sl~dlp~~iD~v~i~vp----   83 (139)
T d2d59a1          21 KIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL-------------GRKCYPSVLDIPDKIEVVDLFVK----   83 (139)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-------------TEECBSSGGGCSSCCSEEEECSC----
T ss_pred             eEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccC-------------CCcccccccccCccceEEEEEeC----
Confidence            68999998   67999999999999999988864432111             11123334444456787765532    


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEE
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~  112 (229)
                                  -..+..+++.+...+ .+.+++
T Consensus        84 ------------~~~~~~~~~e~~~~g-~k~v~~  104 (139)
T d2d59a1          84 ------------PKLTMEYVEQAIKKG-AKVVWF  104 (139)
T ss_dssp             ------------HHHHHHHHHHHHHHT-CSEEEE
T ss_pred             ------------HHHHHHHHHHHHHhC-CCEEEE
Confidence                        123456666666664 555554

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.08  E-value=0.12  Score=36.22  Aligned_cols=31  Identities=19%  Similarity=0.188  Sum_probs=25.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      +|+|.| +|++|..++..|.+.|.++.++.+.
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence            489999 5999999999999999776655543

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.04  E-value=0.24  Score=40.10  Aligned_cols=31  Identities=35%  Similarity=0.498  Sum_probs=25.4

Q ss_pred             CEEEEEcC-------CChHH---HHHHHHHHHCCCeEEEEE
Q 027007            1 MKILVSGA-------SGYLG---GRLCHALLKQGHSVRALV   31 (229)
Q Consensus         1 m~vlItGg-------~G~iG---~~l~~~l~~~g~~V~~~~   31 (229)
                      |||+....       +|++|   .+|+++|+++||+|.++.
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            89987654       48877   567899999999999885

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=88.97  E-value=0.29  Score=35.16  Aligned_cols=63  Identities=19%  Similarity=0.236  Sum_probs=41.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhc-CCccEEEEeCc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~~a~   74 (229)
                      +|+|-| .|-+|+++++.|.+.|.+|++.+.+..+...... .+.+     ..+.++   ++ .++|+++-||.
T Consensus        29 ~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~-----~~~~~~---~~~~~~DI~iPcA~   92 (201)
T d1c1da1          29 TVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHT-----AVALED---VLSTPCDVFAPCAM   92 (201)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-----ECCGGG---GGGCCCSEEEECSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccc-----ccCccc---cccccceeeecccc
Confidence            677877 8999999999999999999988776433221110 0111     112233   33 37899998874

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.90  E-value=0.11  Score=40.22  Aligned_cols=108  Identities=14%  Similarity=0.026  Sum_probs=60.3

Q ss_pred             EEE-EEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCC------CCCCCeEEEEccCCChhh-HHhhcCCccEEEEeC
Q 027007            2 KIL-VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRS-LVDACFGCHVIFHTA   73 (229)
Q Consensus         2 ~vl-ItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~a   73 (229)
                      +|| +.-|+|+++.+++    ..+.+|+.++.++..++..      ..-..++++.+|..+... +.+.-+.+|.||...
T Consensus       148 rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~Dp  223 (318)
T d1wxxa2         148 RALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP  223 (318)
T ss_dssp             EEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred             eeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcC
Confidence            344 4556777765543    3467899999986532221      111367889999766432 333334699999776


Q ss_pred             cccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                      .......    .....-......+++.+.+..+++-++.++|+.
T Consensus       224 P~~~~~~----~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         224 PAFAKGK----KDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             CCSCCST----TSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             Cccccch----HHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            4322221    122333444556666666654445555556653

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.86  E-value=0.22  Score=37.78  Aligned_cols=31  Identities=23%  Similarity=0.269  Sum_probs=28.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|..|...+.+|+++|.+|+++.+.+
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            78999 59999999999999999999998764

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.51  E-value=0.25  Score=37.85  Aligned_cols=32  Identities=31%  Similarity=0.436  Sum_probs=27.5

Q ss_pred             EEEEcCCChHHHHHHHHHH-----HCCCeEEEEEcCCC
Q 027007            3 ILVSGASGYLGGRLCHALL-----KQGHSVRALVRRTS   35 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~-----~~g~~V~~~~r~~~   35 (229)
                      |+|.|| |-.|..+|..|+     .+|++|+++.|++.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            788885 999999999996     47999999998754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=88.32  E-value=0.75  Score=30.12  Aligned_cols=91  Identities=11%  Similarity=0.082  Sum_probs=52.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCC-CCCCCCCCCCCeEEEEccCCChhhHHhhcC-CccEEEEeCcccCC
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALVEP   78 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~~~~~   78 (229)
                      +|+|.| +|.+|+++++.+.. .+++++++--+. .+....-  .++..+.     ++++.+..+ .++..+-+...   
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I--~Gi~V~~-----~~~l~~~~~~~i~iai~~i~~---   73 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPV--RGGVIEH-----VDLLPQRVPGRIEIALLTVPR---   73 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE--TTEEEEE-----GGGHHHHSTTTCCEEEECSCH---
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE--CCEEEec-----HHHHHHHHhhcccEEEEeCCH---
Confidence            688999 59999999987753 468887775543 2222111  2444443     344555544 35555544321   


Q ss_pred             CCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                                   .....+++.|.+++ .+.+..++...
T Consensus        74 -------------~~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          74 -------------EAAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             -------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             -------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence                         12345667777764 66777765543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.03  E-value=0.29  Score=36.08  Aligned_cols=32  Identities=28%  Similarity=0.275  Sum_probs=28.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      |+|+|| |-.|...|..|+++|.+|.++.+.+.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            889994 99999999999999999999998753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.96  E-value=0.26  Score=36.81  Aligned_cols=34  Identities=15%  Similarity=0.187  Sum_probs=29.5

Q ss_pred             EEEEEcCCChHHHHH-----HHHHHHCCCeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRL-----CHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l-----~~~l~~~g~~V~~~~r~~~   35 (229)
                      +|+|+.|-|++|+..     +..|+++|++|.+++-++.
T Consensus        21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            688888899999875     6888899999999999864

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.53  E-value=0.26  Score=36.67  Aligned_cols=34  Identities=18%  Similarity=0.326  Sum_probs=27.6

Q ss_pred             CE-EEEEcCCChHHHHH-----HHHHHHCCCeEEEEEcCCC
Q 027007            1 MK-ILVSGASGYLGGRL-----CHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~-vlItGg~G~iG~~l-----~~~l~~~g~~V~~~~r~~~   35 (229)
                      || |.|+| -|++|+..     +..|++.|++|.++|-+++
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            75 66887 89988864     4588889999999999864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.49  E-value=0.13  Score=35.60  Aligned_cols=65  Identities=14%  Similarity=0.135  Sum_probs=37.1

Q ss_pred             CEEEEEcCCChHHHH-HHHHHHHC-CCeEEEEE-cCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeC
Q 027007            1 MKILVSGASGYLGGR-LCHALLKQ-GHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (229)
Q Consensus         1 m~vlItGg~G~iG~~-l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   73 (229)
                      |||.|.| +|.+|+. ....|... +.+++++. +++++.......-+     .+.  .++++++.+++|+|+-+.
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~-----~~~--~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR-----IPY--ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT-----CCB--CSSHHHHHTTCSEEEECS
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc-----ccc--cccchhhhhhcccccccc
Confidence            6899999 6899975 45666553 67776554 55544322211001     112  223444557899987664

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.46  E-value=0.32  Score=37.39  Aligned_cols=33  Identities=36%  Similarity=0.407  Sum_probs=28.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS   35 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g--~~V~~~~r~~~   35 (229)
                      ||+|+| +|.-|..++..|+++|  ++|+++.|+..
T Consensus         6 rVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           6 KIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            699999 4999999999998876  69999998753

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.99  E-value=0.33  Score=35.02  Aligned_cols=32  Identities=31%  Similarity=0.318  Sum_probs=27.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~   34 (229)
                      ||.|+| +|-.|...|..|.+.  |++|+++.+.+
T Consensus         3 kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             eEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            789999 599999999999765  78999998764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=86.99  E-value=0.34  Score=37.42  Aligned_cols=30  Identities=23%  Similarity=0.383  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      ++|.| +|.-|..+|.+|++.|++|+++-+.
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            68888 6999999999999999999999764

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=86.88  E-value=0.44  Score=36.69  Aligned_cols=32  Identities=25%  Similarity=0.258  Sum_probs=24.9

Q ss_pred             CEEEEEc-CC-ChH--HHHHHHHHHHCCCeEEEEEc
Q 027007            1 MKILVSG-AS-GYL--GGRLCHALLKQGHSVRALVR   32 (229)
Q Consensus         1 m~vlItG-g~-G~i--G~~l~~~l~~~g~~V~~~~r   32 (229)
                      |||||++ || |-+  ..+|+++|.++||+|+.++.
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            9998874 33 223  56699999999999998874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=86.82  E-value=0.11  Score=36.03  Aligned_cols=64  Identities=9%  Similarity=0.032  Sum_probs=44.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCcc
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   75 (229)
                      +++|.| =|.+|+-+|+.|...|.+|+++..+|-+.  ++.       ..|=-.-..+.++++..|++|-+.|-
T Consensus        25 ~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lqA-------~mdGf~v~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          25 IVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA--IQA-------VMEGFNVVTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH--HHH-------HTTTCEECCHHHHTTTCSEEEECCSS
T ss_pred             EEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh--HHH-------HhcCCccCchhHccccCcEEEEcCCC
Confidence            577777 79999999999999999999998875221  100       01111223445677888888877764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.75  E-value=0.36  Score=34.78  Aligned_cols=35  Identities=29%  Similarity=0.369  Sum_probs=28.3

Q ss_pred             CE-EEEEcCCChHHHH-----HHHHHHHCCCeEEEEEcCCC
Q 027007            1 MK-ILVSGASGYLGGR-----LCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~-vlItGg~G~iG~~-----l~~~l~~~g~~V~~~~r~~~   35 (229)
                      || |.|+++-|++|+.     ++..|+++|.+|.+++-++.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            77 4699899998875     56678888999999988754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.68  E-value=0.41  Score=32.61  Aligned_cols=33  Identities=24%  Similarity=0.303  Sum_probs=27.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~--g~~V~~~~r~~   34 (229)
                      +|.|.|+||.||.....-+.+.  .++|++++-+.
T Consensus         4 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           4 TVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            6999999999999999887664  48888887653

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=86.58  E-value=0.32  Score=37.86  Aligned_cols=30  Identities=30%  Similarity=0.359  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      |+|+| +|+-|..+|.+|+++|.+|.++-+.
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            67888 6999999999999999999999874

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.48  E-value=0.45  Score=33.89  Aligned_cols=30  Identities=13%  Similarity=0.117  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~   33 (229)
                      ++|+|| |..|...+..+++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            688885 999999999999999999999874

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=86.39  E-value=0.43  Score=35.64  Aligned_cols=31  Identities=23%  Similarity=0.284  Sum_probs=27.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQ-GHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~-g~~V~~~~r~~   34 (229)
                      |+|+|| |.-|...+..|+++ |++|+++.+.+
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            789996 99999999999875 99999999875

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=86.01  E-value=0.077  Score=36.87  Aligned_cols=99  Identities=18%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             CEEEEEcCCChHHHH-HHHHHHHC-CCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcCCccEEEEeCccc--
Q 027007            1 MKILVSGASGYLGGR-LCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--   76 (229)
Q Consensus         1 m~vlItGg~G~iG~~-l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~--   76 (229)
                      |||.|.| +|.+|+. ..+.|... +.+++++++++++.+.....-++..+   .+|.+++.+  .++|+|+-+....  
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~ll~--~~iD~V~I~tp~~~H   75 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSAT---CTDYRDVLQ--YGVDAVMIHAATDVH   75 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCC---CSSTTGGGG--GCCSEEEECSCGGGH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccc---cccHHHhcc--cccceeccccccccc
Confidence            7899999 5888865 56666555 46777777665432221110011101   123333322  3689887665431  


Q ss_pred             --------CCCCC-CchhhhHhhHHHHHHHHHHHHhcC
Q 027007           77 --------EPWLP-DPSRFFAVNVEGLKNVVQAAKETK  105 (229)
Q Consensus        77 --------~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~  105 (229)
                              ..... -.++-+..|+.....|.+++.+++
T Consensus        76 ~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~  113 (167)
T d1xeaa1          76 STLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH  113 (167)
T ss_dssp             HHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCcCCHHHHHHHHHHHHHcC
Confidence                    00000 011224567777888888887764

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.75  E-value=0.38  Score=36.72  Aligned_cols=31  Identities=23%  Similarity=0.263  Sum_probs=28.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|..|...+..|+++|.+|+++.+.+
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78898 59999999999999999999998764

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.61  E-value=1.9  Score=31.36  Aligned_cols=31  Identities=23%  Similarity=0.283  Sum_probs=25.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~   33 (229)
                      +|+|-| .|-+|+++++.|.+ .|.+|+.++-+
T Consensus        33 ~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          33 TVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             EEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            566666 89999999999975 59999887643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.60  E-value=0.26  Score=38.15  Aligned_cols=103  Identities=13%  Similarity=0.073  Sum_probs=56.9

Q ss_pred             EcCCChHHHHHHHHHHHCC-CeEEEEEcCCCCCCCC------C-CCCCeEEEEccCCChhh-HHhhcCCccEEEEeCccc
Q 027007            6 SGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALV   76 (229)
Q Consensus         6 tGg~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~------~-~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi~~a~~~   76 (229)
                      ..|+|.++.+++    ..| .+|+.++.++..++..      . -...++++.+|+.+.-. +.+.-..+|.||......
T Consensus       153 ~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         153 FTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             cCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCchhcCCccc
Confidence            345666665543    445 4799999986532211      1 11367888999754322 222234689999775432


Q ss_pred             CCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccc
Q 027007           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (229)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~  116 (229)
                      .    ........-......+++.+.+..+++.++.++|+
T Consensus       229 ~----~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         229 V----QHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             C----SSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             c----CCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            1    11223334455566777777765444555555554

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.58  E-value=0.4  Score=37.83  Aligned_cols=53  Identities=17%  Similarity=0.149  Sum_probs=36.9

Q ss_pred             EEEEcCCChHHHHHHHHHHH------CCCeEEEEEcCCCCCCCCCCCCCeEEEEccCCChhhHHhhcC
Q 027007            3 ILVSGASGYLGGRLCHALLK------QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF   64 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   64 (229)
                      |+|.|| |--|+..|..|++      +|.+|.++.|....-..        ...+.+.++..+.+++.
T Consensus        35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k--------~~~Ggvl~~~~l~~l~p   93 (380)
T d2gmha1          35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH--------TLSGACLDPRAFEELFP   93 (380)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT--------CCCCCEECTHHHHHHCT
T ss_pred             EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCCCCCC--------ccccccccHHHHHHHcc
Confidence            789995 9999999999986      89999999987542221        12234445556655543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.53  E-value=0.68  Score=31.46  Aligned_cols=32  Identities=25%  Similarity=0.304  Sum_probs=26.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~-V~~~~r~~   34 (229)
                      ||+|.|| |..|...+..+.+.|.+ |+++.|..
T Consensus        47 kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          47 AVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             EEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             EEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            6889884 99999999999999865 77777753

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.22  E-value=0.36  Score=34.76  Aligned_cols=33  Identities=27%  Similarity=0.169  Sum_probs=28.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRT   34 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g-------~~V~~~~r~~   34 (229)
                      +||+|+| +|--|.+.|.+|+++|       ++|++..+.+
T Consensus         3 ~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            3799999 5999999999999988       4799998865

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=84.07  E-value=0.35  Score=32.63  Aligned_cols=31  Identities=19%  Similarity=0.128  Sum_probs=20.4

Q ss_pred             EEcCCChHHHHHHHHHHHCCCeEEEEEcCCCC
Q 027007            5 VSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (229)
Q Consensus         5 ItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~~   36 (229)
                      +.| +|.+|+++++.|.+.++.+.+.+|++++
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~   34 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDR   34 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHH
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence            455 7999999999886654444678887653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.92  E-value=2.3  Score=31.11  Aligned_cols=31  Identities=26%  Similarity=0.311  Sum_probs=24.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~-~g~~V~~~~r~   33 (229)
                      +|+|-| .|-+|+++++.|.+ .|.+|+.+.-.
T Consensus        34 ~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          34 TIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            577777 69999999999976 48998877644

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.75  E-value=0.43  Score=36.76  Aligned_cols=108  Identities=11%  Similarity=0.050  Sum_probs=57.8

Q ss_pred             EEE-EEcCCChHHHHHHHHHHHCCC-eEEEEEcCCCCCCCC------C--CCCCeEEEEccCCCh-hhHHhhcCCccEEE
Q 027007            2 KIL-VSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL------P--SEGALELVYGDVTDY-RSLVDACFGCHVIF   70 (229)
Q Consensus         2 ~vl-ItGg~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~------~--~~~~~~~~~~D~~~~-~~~~~~~~~~d~vi   70 (229)
                      +|| +..++|.++.+    ++..|. +|+.++.++..++..      +  ...+++++++|+.+. ....+--+.+|+||
T Consensus       147 ~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD~Ii  222 (317)
T d2b78a2         147 TVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII  222 (317)
T ss_dssp             EEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCCEEE
Confidence            444 55667776644    334564 799999887532211      1  113688999997543 12222234689998


Q ss_pred             EeCcccCCCCCCchhhhHhhHHHHHHHHHHHHhcCCCceEEEEccce
Q 027007           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (229)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~iv~~sS~~  117 (229)
                      -.......+...    ...-......|++.+.+...++.++.++|+.
T Consensus       223 ~DPP~f~~~~~~----~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         223 IDPPSFARNKKE----VFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             ECCCCC-----C----CCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EcChhhccchhH----HHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            764322111111    1122334556777777665455677677653

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.41  E-value=0.66  Score=32.92  Aligned_cols=31  Identities=16%  Similarity=0.231  Sum_probs=27.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+|| |..|...+..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            688885 8999999999999999999998753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.15  E-value=0.62  Score=35.30  Aligned_cols=33  Identities=30%  Similarity=0.468  Sum_probs=23.4

Q ss_pred             CEEEEEcC-C-ChH--HHHHHHHHHHCCCeEEEEEcC
Q 027007            1 MKILVSGA-S-GYL--GGRLCHALLKQGHSVRALVRR   33 (229)
Q Consensus         1 m~vlItGg-~-G~i--G~~l~~~l~~~g~~V~~~~r~   33 (229)
                      .||+|++| | |-+  ..+|+++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            37877764 3 233  446889999999999887643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=83.06  E-value=0.96  Score=31.61  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=26.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcC
Q 027007            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g-~~V~~~~r~   33 (229)
                      ||.|.| .|.||+.+++.+.+++ .+|+.+...
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            789998 8999999999999875 788877543

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.95  E-value=0.52  Score=35.86  Aligned_cols=31  Identities=29%  Similarity=0.314  Sum_probs=28.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|..|...+.+++++|.+|+++.+.+
T Consensus        22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVG-AGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78998 59999999999999999999998754

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.87  E-value=0.7  Score=31.74  Aligned_cols=31  Identities=23%  Similarity=0.292  Sum_probs=27.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|.| +|..|...+..+.+.|.+|.++.++.
T Consensus         4 ViIIG-gGpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           4 VLIVG-SGPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCeEEEEEEec
Confidence            78888 49999999999999999999998653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.20  E-value=0.75  Score=32.14  Aligned_cols=32  Identities=6%  Similarity=-0.007  Sum_probs=28.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      +|+|.|| |..|...+..+++.|.+|+++.+..
T Consensus         7 ~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           7 RLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            6899995 8999999999999999999997653

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=81.95  E-value=0.7  Score=35.15  Aligned_cols=31  Identities=32%  Similarity=0.281  Sum_probs=27.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+| +|.-|...|..++++|.+|+++.+.+
T Consensus         8 VvVIG-~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIG-GGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            78998 59999999999999999999997753

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=81.89  E-value=0.86  Score=32.07  Aligned_cols=32  Identities=31%  Similarity=0.491  Sum_probs=24.0

Q ss_pred             CEEE--EEcCCCh-HHHHHHHHHHHC-CCeEEEEEc
Q 027007            1 MKIL--VSGASGY-LGGRLCHALLKQ-GHSVRALVR   32 (229)
Q Consensus         1 m~vl--ItGg~G~-iG~~l~~~l~~~-g~~V~~~~r   32 (229)
                      |||+  |||++|. .+..+++.|.+. |++|.++.-
T Consensus         1 MrIllgITGas~a~~a~~ll~~L~~~~g~~V~vv~T   36 (186)
T d1sbza_           1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMS   36 (186)
T ss_dssp             CEEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             CEEEEEEccHHHHHHHHHHHHHHHHhcCCEEEEEEC
Confidence            8864  7888774 488889999884 788866644

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.77  E-value=1  Score=32.01  Aligned_cols=31  Identities=16%  Similarity=0.259  Sum_probs=27.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         3 vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      |+|+|| |-.|...+..+++.|.+|.++.++.
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            788885 9999999999999999999998653

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.40  E-value=0.85  Score=35.08  Aligned_cols=32  Identities=25%  Similarity=0.309  Sum_probs=24.2

Q ss_pred             CEEEEE-cCCC-hH--HHHHHHHHHHCCCeEEEEEc
Q 027007            1 MKILVS-GASG-YL--GGRLCHALLKQGHSVRALVR   32 (229)
Q Consensus         1 m~vlIt-Gg~G-~i--G~~l~~~l~~~g~~V~~~~r   32 (229)
                      ||||++ +||+ -+  -.+|+++|.++||+|+.++.
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            998766 5543 12  34688999999999999874

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.39  E-value=0.82  Score=28.82  Aligned_cols=34  Identities=15%  Similarity=0.031  Sum_probs=27.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCCC
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~~   35 (229)
                      ++|+|.| +|.-|..++.+|++...+|+...|+..
T Consensus        33 K~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          33 ESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            4799999 479999999999988878777777543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.25  E-value=0.78  Score=31.89  Aligned_cols=32  Identities=16%  Similarity=0.130  Sum_probs=28.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCC
Q 027007            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (229)
Q Consensus         2 ~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r~~   34 (229)
                      +|+|+|| |..|...+..+.+.|.+|+++.|..
T Consensus         7 dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           7 KLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4889995 8999999999999999999998754

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=81.09  E-value=1  Score=31.21  Aligned_cols=31  Identities=26%  Similarity=0.430  Sum_probs=27.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEEc
Q 027007            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (229)
Q Consensus         1 m~vlItGg~G~iG~~l~~~l~~~g~~V~~~~r   32 (229)
                      |||.|-| -|-||+.+.|.|.+++.+|+.+.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence            8999998 799999999999999999888764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=80.02  E-value=0.68  Score=32.70  Aligned_cols=31  Identities=19%  Similarity=0.255  Sum_probs=24.9

Q ss_pred             EEEEEcCCChHHHH-----HHHHHHHCCCeEEEEEc
Q 027007            2 KILVSGASGYLGGR-----LCHALLKQGHSVRALVR   32 (229)
Q Consensus         2 ~vlItGg~G~iG~~-----l~~~l~~~g~~V~~~~r   32 (229)
                      |++|||-+.++|+.     |++.|+++|++|.+++-
T Consensus         3 ~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            67899855588875     67888899999999864