Citrus Sinensis ID: 027076


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGTEDKSDSGVTAAVIARSAGVGENYKKICACDGTIIWESSSNDFVASKV
cccccccHHHHHHHHHHccccccEEEEEEccccEEEEEEcccHHHHHHHHHHHcccEEEEccccccHHcEEEEEEEEccccCEEEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccEEEccccEEEEEEEEccccccccccEEEEEcccccccccccccccccccccccccccEEEEECcCEEEEccccccccccc
*VDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEG****PLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGTEDKSDSGVTAAVIARSAGVGENYKKICACDGTIIWESSS********
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MVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAKEPLGDLGTVVADEKGEAFFSGVKEMLRVADLIGRSIVVYGTEDKSDSGVTAAVIARSAGVGENYKKICACDGTIIWESSSNDFVASKV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Superoxide dismutase 1 copper chaperone Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1.probableQ6FU61
Superoxide dismutase 1 copper chaperone Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1.probableQ6BK66
Superoxide dismutase 1 copper chaperone Copper chaperone for superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to SOD1.probableQ75DD6

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DO5, chain A
Confidence level:very confident
Coverage over the Query: 70-201
View the alignment between query and template
View the model in PyMOL
Template: 1JK9, chain B
Confidence level:very confident
Coverage over the Query: 3-223
View the alignment between query and template
View the model in PyMOL