Citrus Sinensis ID: 027106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE
Secondary Structure (PSIPRED)
ccccccccccccHHHHccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcccccccHHHHHHHHcccccEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEHHHccccHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccEcccccccHHHHHHHcccccHHHHHEHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHEcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHcccEEEEHHEEccccccccccccHHHHHHHHEEEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mlrkfdpmgfplsYQVGILGFSGLTAYAGLfeigkpkkgeKVFVSAASGSVGHLVGQYAKLFGCYvvgsagskeKVTLLKDklgfddafnYKEETDLKAALKRyfpdgidiyfDNVGAEMQEAAIANMNTYGRVAVCGViseytdgkkraaPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCnhlrsgaiypledisdgvesipsaftglfqggnigkkvVRITEE
Flexible Loop (DISEMBL)
mlrkfdpmgFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAftglfqggnigkkvVRITEE
Low Complexity Region (SEG)
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE
Disordered region (IsUnstruct)
*******MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR****
Disordered Region (DISOPRED)
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT**
Disordered Region (DISEMBL)
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE
Disordered Region (DISPRO)
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	228	2.2.26 [Sep-21-2011]
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.956	0.637	0.587	3e-72
Q39172	345	NADP-dependent alkenal do	yes	no	0.956	0.631	0.577	2e-71
Q39173	343	NADP-dependent alkenal do	no	no	0.956	0.635	0.577	1e-70
O34812	339	Putative NADP-dependent o	yes	no	0.986	0.663	0.439	1e-47
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.942	0.653	0.463	1e-46
P97584	329	Prostaglandin reductase 1	yes	no	0.973	0.674	0.456	4e-46
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.969	0.633	0.450	1e-45
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.942	0.653	0.450	2e-43
Q29073	329	Prostaglandin reductase 1	yes	no	0.951	0.659	0.445	6e-43
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.947	0.656	0.429	3e-42

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  271 bits (692), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 128/218 (58%), Positives = 165/218 (75%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY VGILG  G+TAYAG FEI  PKKGE VFV+AA+GSVG LVGQ+AK+FGCYVVGSA
Sbjct: 125 PLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSA 184

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GSKEKV LLK+K GFDDAFNYKEE+D   ALKR+FP+GIDIYFDNVG +M EA I NM  
Sbjct: 185 GSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRV 244

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           +GR+AVCG++S+Y+  +      +L +I K+I+ QGF+  D+ +LY  F+      ++ G
Sbjct: 245 HGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEG 304

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            +  +EDIS+G+ES PSA  G++ G N+G +VV ++ E
Sbjct: 305 KVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 8EC: 1

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  268 bits (686), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/218 (57%), Positives = 161/218 (73%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY  G+LG  G+TAYAG +E+  PK+GE V+VSAASG+VG LVGQ AK+ GCYVVGSA
Sbjct: 128 PLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 187

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GSKEKV LLK K GFDDAFNYKEE+DL AALKR FP+GIDIYF+NVG +M +A + NMN 
Sbjct: 188 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 247

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           +GR+AVCG+IS+Y    +     + ++IYKRI+ QGF+ +D  + Y  F+     H+R G
Sbjct: 248 HGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREG 307

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            I  +ED++DG+E  P A  GLF G N+GK+VV +  E
Sbjct: 308 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  266 bits (679), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 126/218 (57%), Positives = 160/218 (73%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY  G+LG  G+TAYAG +E+  PKKGE V+VSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct: 126 PLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSA 185

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GSKEKV LLK K GFDDAFNYKEE+DL AALKR FP GID+YF+NVG +M +A + NMN 
Sbjct: 186 GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNP 245

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           +GR+AVCG+IS+Y    +     + ++IYKRI+ QGF+ AD  + Y  F+      ++ G
Sbjct: 246 HGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEG 305

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            I  +ED++DG+E  P A  GLF G N+GK+VV I  E
Sbjct: 306 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/230 (43%), Positives = 146/230 (63%), Gaps = 5/230 (2%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
           LRK D    P S  +GILG +GLTAY GL +IG+PK+GE V VS A+G+VG  VGQ AK+
Sbjct: 109 LRKIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKI 168

Query: 62  FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
            G  VVG AGS EK+  LK +L FD+A NYK   D++ AL+   PDG+D+YFDNVG  + 
Sbjct: 169 KGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPIS 228

Query: 122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIK----FQGFLAADHLNLYQ 177
           +A +  +N + R+ VCG IS Y + +  A      V  K IK     QGF+ +D+ + + 
Sbjct: 229 DAVMNLLNEFARIPVCGAISSY-NAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFS 287

Query: 178 DFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
           +        L++G ++  E I++G E+IP AF GLF+G N GK+++++++
Sbjct: 288 EGAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVSD 337

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 7/222 (3%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL +I   K GE V VSAA+G+VG +VGQ AKL GC V
Sbjct: 110 PDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKV 169

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EKV  LK KLGFD AFNYK    L+ AL+   PDG D YFDNVG E   A I 
Sbjct: 170 VGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVIL 228

Query: 127 NMNTYGRVAVCGVISEYTDG---KKRAAPEMLDVIYKRIKFQGFLAADHL-NLYQDFIST 182
            M T+GR+A+CG IS+Y       +  APE+  VIY++++ +GF+       + Q  ++ 
Sbjct: 229 QMKTFGRIAICGAISQYNRTGPCPQGPAPEV--VIYQQLRMEGFIVNRWQGEVRQKALTE 286

Query: 183 TCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
             N +  G +   E +++G E +P+AF G+ +G N+GK +V+
Sbjct: 287 LMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  184 bits (468), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/228 (45%), Positives = 138/228 (60%), Gaps = 6/228 (2%)

Query: 2   LRKFD---PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQY 58
           LRK     P   PLS  +G +G  GLTAY GL +I   K GE V V+AA+G+VG +VGQ 
Sbjct: 102 LRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQI 161

Query: 59  AKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA 118
           AKL GC VVG+AGS EKV  LK KLGFD AFNYK    L+ AL+   PDG D YFDNVG 
Sbjct: 162 AKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGG 220

Query: 119 EMQEAAIANMNTYGRVAVCGVISEYT-DGKKRAAPEMLDVIYKRIKFQGFLAADHL-NLY 176
           E     I  M T+GR+A+CG IS+Y   G     P    +IY++++ +GF+       + 
Sbjct: 221 EFSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVR 280

Query: 177 QDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
           Q  ++   N +  G I   E I++G E +P+AF G+ +G N+GK +V+
Sbjct: 281 QKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  182 bits (463), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/224 (45%), Positives = 132/224 (58%), Gaps = 3/224 (1%)

Query: 6   DPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY 65
           +P   PL   VG LG    TAY GL  IGKPK GE +++SAASG+VG + GQ AK  G +
Sbjct: 128 NPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLH 187

Query: 66  VVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAI 125
           VVGS GS EK  +  D  G+D  FNYK+E+  K AL R  P GIDIYF+NVG E  +A +
Sbjct: 188 VVGSVGSDEKFKICLDS-GYDSVFNYKKESPFK-ALPRLCPKGIDIYFENVGGETMDAVL 245

Query: 126 ANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQD-FISTTC 184
            NMN  GR+  CG IS+Y +        +  V+ K +  QGF+ A+ L  YQ+ +     
Sbjct: 246 ENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQYFEEMP 305

Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
             +  G I    D+ DG+ES P AF G+ QG N GK +V+I +E
Sbjct: 306 KLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/222 (45%), Positives = 132/222 (59%), Gaps = 7/222 (3%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL +I   K GE V VSAA+G+VG +VGQ AKL GC V
Sbjct: 110 PDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKV 169

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EKV  LK K GFD A NYK    L+ ALK   P+G D YFDNVG E    AI 
Sbjct: 170 VGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAIT 228

Query: 127 NMNTYGRVAVCGVISEYTDGKKRA---APEMLDVIYKRIKFQGFLAADHL-NLYQDFIST 182
            M  +GR+A+CG IS Y      +   +PE+  +I+K +  QGF+       + Q  +  
Sbjct: 229 QMKKFGRIAICGAISVYNRTSPLSPGPSPEI--IIFKELHLQGFVVYRWQGEVRQKALRD 286

Query: 183 TCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
               +  G I   E +++G E++P+AF GL +G N+GK +V+
Sbjct: 287 LLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1

 Score =  174 bits (440), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 129/220 (58%), Gaps = 3/220 (1%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL +I   K GE V V+AA+G+VG +VGQ AKL GC V
Sbjct: 110 PDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 169

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EKV  LK K GFD AFNYK    L+  LK+  P+G D YFDNVG E   A  +
Sbjct: 170 VGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTS 228

Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEMLD-VIYKRIKFQGFLAADHL-NLYQDFISTTC 184
            M  +GR+A+CG IS Y            + VIY  + FQGF+       + Q  +    
Sbjct: 229 QMKKFGRIAICGAISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKALRDLL 288

Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
             +  G I   E I++G E++P+AF G+ +G N+GK +V+
Sbjct: 289 KWVSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIVK 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  171 bits (433), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 3/219 (1%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL E+   K GE V VSAA+G+VG +VGQ AKL GC V
Sbjct: 110 PDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKV 169

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EK+  LK ++GFD AFNYK    L+ ALK+  PDG D YFDNVG E     ++
Sbjct: 170 VGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLS 228

Query: 127 NMNTYGRVAVCGVISEYTDGKK-RAAPEMLDVIYKRIKFQGFLAADHL-NLYQDFISTTC 184
            M  +G++A+CG IS Y    +    P    +IYK+++ +GF+      ++ +  +    
Sbjct: 229 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM 288

Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
             +  G I   E ++ G E++P+AF  +  G N+GK VV
Sbjct: 289 KWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
255567007	346	alcohol dehydrogenase, putative [Ricinus	1.0	0.658	0.793	1e-104
225445486	346	PREDICTED: NADP-dependent alkenal double	1.0	0.658	0.780	1e-100
147810325	805	hypothetical protein VITISV_026273 [Viti	0.973	0.275	0.783	5e-98
359485040	347	PREDICTED: LOW QUALITY PROTEIN: NADP-dep	1.0	0.657	0.719	2e-93
225445965	347	PREDICTED: NADP-dependent alkenal double	0.995	0.654	0.713	3e-92
297735439	359	unnamed protein product [Vitis vinifera]	0.969	0.615	0.728	2e-91
224087152	347	predicted protein [Populus trichocarpa]	1.0	0.657	0.724	6e-91
356517014	346	PREDICTED: NADP-dependent alkenal double	1.0	0.658	0.684	4e-90
388508546	346	unknown [Medicago truncatula]	1.0	0.658	0.684	4e-88
147783962	338	hypothetical protein VITISV_003098 [Viti	0.956	0.644	0.700	8e-88

>gi|255567007|ref|XP_002524486.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223536274|gb|EEF37926.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/228 (79%), Positives = 207/228 (90%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           MLRKFDPM FP+S+ VGILGFSGLTAYAGLFE+ KPKKGEKVFVSAASGSVG+LVGQYAK
Sbjct: 119 MLRKFDPMRFPMSHHVGILGFSGLTAYAGLFEVCKPKKGEKVFVSAASGSVGNLVGQYAK 178

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           LFGCYVVG AGSKEK+ +LK+KLGFDDAFNYKEETDLKA LKRYFPDGIDIYFDNVGAEM
Sbjct: 179 LFGCYVVGCAGSKEKIAMLKEKLGFDDAFNYKEETDLKATLKRYFPDGIDIYFDNVGAEM 238

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
           QEAAIANM  +GRVAVCGVISEYTD  ++AAPEM+DV+Y+RIK QGFLAAD +N+Y DFI
Sbjct: 239 QEAAIANMKIFGRVAVCGVISEYTDSGRKAAPEMIDVVYRRIKIQGFLAADFMNVYADFI 298

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           STTC++LR+G ++ LEDIS GVESIP++  GLF+G NIGKK+V++  E
Sbjct: 299 STTCDYLRAGKMHVLEDISTGVESIPTSLIGLFRGHNIGKKMVQLAAE 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445486|ref|XP_002285167.1| PREDICTED: NADP-dependent alkenal double bond reductase P1 [Vitis vinifera] gi|297738946|emb|CBI28191.3| unnamed protein product [Vitis vinifera]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/228 (78%), Positives = 200/228 (87%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           MLRK DPMGFPLS  VGILGFSGLTA+ G F++ KPKKGEKVFVSAASGSVG+LVGQYAK
Sbjct: 119 MLRKLDPMGFPLSNHVGILGFSGLTAHGGFFQVCKPKKGEKVFVSAASGSVGNLVGQYAK 178

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           LFGCYVVG AGSK+KV LLK+KLGFDDAFNYKEETDLK+ LKRYFPDGIDIYFDNVGAEM
Sbjct: 179 LFGCYVVGCAGSKQKVNLLKEKLGFDDAFNYKEETDLKSTLKRYFPDGIDIYFDNVGAEM 238

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EAA+ANMN +GRVAVCGVIS+YTD  KRAAP+MLD++YKRI  QGFLAAD +N Y DFI
Sbjct: 239 LEAAVANMNIFGRVAVCGVISQYTDSGKRAAPDMLDIVYKRITMQGFLAADLMNGYTDFI 298

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           STT ++L  G I  +EDIS GVESIPSAF GLF+G N+GKK+V+I +E
Sbjct: 299 STTQDYLNDGKIQVIEDISQGVESIPSAFVGLFRGDNVGKKIVKIADE 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 174/222 (78%), Positives = 195/222 (87%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           MLRK DPMGFPLS  VGILGFSGLTA+ G F++ KPKKGEKVFVSAASGSVG+LVGQYAK
Sbjct: 121 MLRKLDPMGFPLSNHVGILGFSGLTAHGGFFQVCKPKKGEKVFVSAASGSVGNLVGQYAK 180

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           LFGCYVVG AG+K+KV LLK+KLGFDDAFNYKEETDLK+ LKRYFPDGIDIYFDNVGAEM
Sbjct: 181 LFGCYVVGCAGNKQKVNLLKEKLGFDDAFNYKEETDLKSTLKRYFPDGIDIYFDNVGAEM 240

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EAA+ANMN +GRVAVCGVIS+YTD  KRAAP+MLD++YKRI  QGFLAAD +N Y DFI
Sbjct: 241 LEAAVANMNIFGRVAVCGVISQYTDSGKRAAPDMLDIVYKRITIQGFLAADLMNGYTDFI 300

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKV 222
           STT ++L  G I  +EDIS GVESIPSAF GLF+G N+GKK+
Sbjct: 301 STTQDYLNDGKIQVIEDISQGVESIPSAFVGLFRGDNVGKKI 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485040|ref|XP_003633205.1| PREDICTED: LOW QUALITY PROTEIN: NADP-dependent alkenal double bond reductase P2-like [Vitis vinifera]

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 164/228 (71%), Positives = 193/228 (84%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           +LRK DPMGFPLSY +G+LG SGLTAYAG  E+ KPKKGEKVFVSAA GSVG+LVGQYAK
Sbjct: 120 ILRKLDPMGFPLSYHLGVLGLSGLTAYAGFVEVCKPKKGEKVFVSAACGSVGNLVGQYAK 179

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           LFGC+VVG AG+K+KV LLK KLGFDDAFNYKEETDLK+ LKRYFPDG+DIYFDNVG +M
Sbjct: 180 LFGCHVVGCAGTKQKVELLKGKLGFDDAFNYKEETDLKSTLKRYFPDGMDIYFDNVGGKM 239

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EA++ANMN +GR+AVCG+ISEYT   +RAAP+M+D++YKR+K QGFL  D+L    DFI
Sbjct: 240 LEASVANMNPFGRIAVCGIISEYTGIGERAAPDMIDIVYKRLKIQGFLVIDYLKGMDDFI 299

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           ST  NHL +G I+ LEDIS GVESI SAF GLFQG N+GK VV++ +E
Sbjct: 300 STMSNHLSTGKIHVLEDISQGVESISSAFVGLFQGDNVGKXVVKVADE 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445965|ref|XP_002265626.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|297735440|emb|CBI17880.3| unnamed protein product [Vitis vinifera]

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 162/227 (71%), Positives = 190/227 (83%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
            RK DPMGFPLSY +G+LG SGLTAY G FE+ KPKKGEKVFVSAA GSVG+LVGQYAKL
Sbjct: 121 FRKLDPMGFPLSYHLGVLGLSGLTAYGGFFEVCKPKKGEKVFVSAACGSVGNLVGQYAKL 180

Query: 62  FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
           FGC+VVG AG+K+KV LLK KLGFDDAFNYKEE DLK+ LKRYFPDGIDIYFDNVG +M 
Sbjct: 181 FGCHVVGCAGTKQKVELLKGKLGFDDAFNYKEEADLKSTLKRYFPDGIDIYFDNVGGKML 240

Query: 122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIS 181
           EA++ANMN +GR+AVCG+ISEYT   +R AP+M+D++YKR+K QGFL  D+L    DFIS
Sbjct: 241 EASVANMNPFGRIAVCGIISEYTGIGERVAPDMIDIVYKRLKVQGFLVIDYLKGMDDFIS 300

Query: 182 TTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           T  NHL +  I+ LEDIS GVESIPSAF GLF+G N+GKKVV++ +E
Sbjct: 301 TMSNHLSTDKIHVLEDISQGVESIPSAFVGLFRGDNVGKKVVKVADE 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735439|emb|CBI17879.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/221 (72%), Positives = 188/221 (85%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           +LRK DPMGFPLSY +G+LG SGLTAYAG  E+ KPKKGEKVFVSAA GSVG+LVGQYAK
Sbjct: 120 ILRKLDPMGFPLSYHLGVLGLSGLTAYAGFVEVCKPKKGEKVFVSAACGSVGNLVGQYAK 179

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           LFGC+VVG AG+K+KV LLK KLGFDDAFNYKEETDLK+ LKRYFPDG+DIYFDNVG +M
Sbjct: 180 LFGCHVVGCAGTKQKVELLKGKLGFDDAFNYKEETDLKSTLKRYFPDGMDIYFDNVGGKM 239

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EA++ANMN +GR+AVCG+ISEYT   +RAAP+M+D++YKR+K QGFL  D+L    DFI
Sbjct: 240 LEASVANMNPFGRIAVCGIISEYTGIGERAAPDMIDIVYKRLKIQGFLVIDYLKGMDDFI 299

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKK 221
           ST  NHL +G I+ LEDIS GVESI SAF GLFQG N+GK+
Sbjct: 300 STMSNHLSTGKIHVLEDISQGVESISSAFVGLFQGDNVGKR 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087152|ref|XP_002308086.1| predicted protein [Populus trichocarpa] gi|222854062|gb|EEE91609.1| predicted protein [Populus trichocarpa]

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 166/229 (72%), Positives = 191/229 (83%), Gaps = 1/229 (0%)

Query: 1   MLRKFDP-MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYA 59
           MLRK DP    PLSY  G LG SGLTAYAGLFEI KPKKG+KVFVSAA GSVG+LVGQYA
Sbjct: 119 MLRKVDPKTELPLSYHAGSLGLSGLTAYAGLFEICKPKKGDKVFVSAACGSVGNLVGQYA 178

Query: 60  KLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE 119
           KL GCYVVG AGS++KV LLK+KLGFDDAFNYKEETDL +AL RYFPDGIDIYFDNVGA+
Sbjct: 179 KLSGCYVVGCAGSRDKVALLKEKLGFDDAFNYKEETDLNSALTRYFPDGIDIYFDNVGAD 238

Query: 120 MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDF 179
           M EAA+ANMN +GRVA CG I+EY++  KRAAP M+DVIYKRIK QGFLA DH +L+ DF
Sbjct: 239 MLEAAVANMNPFGRVAACGTIAEYSETAKRAAPNMIDVIYKRIKIQGFLAMDHKSLHSDF 298

Query: 180 ISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           +STT  ++++G I   EDIS GVESIP AF GLF+G N+GKK+V+I +E
Sbjct: 299 LSTTTEYIQNGKIKVQEDISIGVESIPLAFIGLFRGDNVGKKIVKIADE 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517014|ref|XP_003527185.1| PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max]

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 156/228 (68%), Positives = 193/228 (84%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           +++K +   FPLSY +G+LGF+GL+AYAG FE+ KP KGEKVFVS ASG+VG+LVGQYAK
Sbjct: 119 IIKKLESSEFPLSYHLGVLGFNGLSAYAGFFELCKPLKGEKVFVSTASGAVGNLVGQYAK 178

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           L GCYVVG AGS++KV LLK+KLGFDDAFNYKEETDL + LKRYFPDGID+YFDNVG EM
Sbjct: 179 LLGCYVVGCAGSQKKVALLKEKLGFDDAFNYKEETDLNSTLKRYFPDGIDVYFDNVGGEM 238

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EAA+ANM  +GRVA+CGVISEYT   KRA+P MLDV+YKRI  +GFLAAD LN+++DF 
Sbjct: 239 LEAAVANMKAFGRVAICGVISEYTSAGKRASPNMLDVVYKRINIRGFLAADFLNVFEDFS 298

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           + T +++R+G +  +ED+S GVESIPSAF GLF+G NIGKK++ +TEE
Sbjct: 299 TKTSDYIRTGKLKVIEDLSLGVESIPSAFVGLFKGDNIGKKIISLTEE 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508546|gb|AFK42339.1| unknown [Medicago truncatula]

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 156/228 (68%), Positives = 191/228 (83%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           +++K +   FPL+Y +GILGFSGL+AY G FEI KP+KGE VFVSAASGSVG++VGQYAK
Sbjct: 119 IIKKLESFEFPLTYHLGILGFSGLSAYGGFFEICKPRKGETVFVSAASGSVGNIVGQYAK 178

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           L GCYVVG AGS++KVTLLK++LGFDDAFNYKEETDL +  KRYFPDGIDIYFDNVG EM
Sbjct: 179 LLGCYVVGCAGSQKKVTLLKEELGFDDAFNYKEETDLNSTFKRYFPDGIDIYFDNVGGEM 238

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            EAA+ANM  +GRV+VCGVISEYTD  KRA+P M+DV+YKRI  +GFLAAD++N++ DF 
Sbjct: 239 LEAAVANMKAFGRVSVCGVISEYTDIGKRASPHMMDVVYKRITIRGFLAADYMNVFGDFS 298

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           + T ++LR+G +  +ED S GVESIPSAF GLF G N+GKKVV + +E
Sbjct: 299 AKTLDYLRNGQLRVIEDRSLGVESIPSAFVGLFNGDNVGKKVVVLADE 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147783962|emb|CAN63564.1| hypothetical protein VITISV_003098 [Vitis vinifera]

 Score =  328 bits (842), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 159/227 (70%), Positives = 184/227 (81%), Gaps = 9/227 (3%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
           LRK DPMGFPLSY +G+LG SGLTAYAG  E+ KPKKGEKVFVSAA GSVG+LVGQYAKL
Sbjct: 121 LRKLDPMGFPLSYHLGVLGLSGLTAYAGFVEVCKPKKGEKVFVSAACGSVGNLVGQYAKL 180

Query: 62  FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
           FGC+VV          LLK KLGFDDAFNYKEETDLK+ LKRYFPDG+DIYFDNVG +M 
Sbjct: 181 FGCHVV---------ELLKGKLGFDDAFNYKEETDLKSTLKRYFPDGMDIYFDNVGGKML 231

Query: 122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIS 181
           EA++ANMN +GR+AVCG+ISEYT   +RAAP+M+D++YKR+K QGFL  D+L    DFIS
Sbjct: 232 EASVANMNPFGRIAVCGIISEYTGIGERAAPDMIDIVYKRLKIQGFLVIDYLKGMDDFIS 291

Query: 182 TTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           T  NHL  G I+ LEDIS GVESI SAF GLFQG N+GKKVV++ +E
Sbjct: 292 TMSNHLSXGKIHVLEDISQGVESISSAFVGLFQGDNVGKKVVKVADE 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	228
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.995	0.663	0.572	1.9e-67
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.956	0.631	0.577	8.2e-67
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.956	0.635	0.577	2.2e-66
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.986	0.652	0.56	4.1e-65
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.986	0.641	0.568	5.2e-65
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.956	0.622	0.559	2.9e-64
TAIR|locus:2034109	350	AT1G65560 [Arabidopsis thalian	0.956	0.622	0.552	2.6e-63
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.956	0.617	0.559	2.6e-63
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.942	0.609	0.572	2.6e-63
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.978	0.644	0.547	6.9e-63

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 130/227 (57%), Positives = 167/227 (73%)

Query:     2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
             L K      PLSY VGILG  G+TAYAG FEI  PKKGE VFV+AA+GSVG LVGQ+AK+
Sbjct:   116 LFKIQDKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKM 175

Query:    62 FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
             FGCYVVGSAGSKEKV LLK+K GFDDAFNYKEE+D   ALKR+FP+GIDIYFDNVG +M 
Sbjct:   176 FGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKML 235

Query:   122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIS 181
             EA I NM  +GR+AVCG++S+Y+  +      +L +I K+I+ QGF+  D+ +LY  F+ 
Sbjct:   236 EAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLE 295

Query:   182 TTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
                  ++ G +  +EDIS+G+ES PSA  G++ G N+G +VV ++ E
Sbjct:   296 MVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 126/218 (57%), Positives = 161/218 (73%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLSY  G+LG  G+TAYAG +E+  PK+GE V+VSAASG+VG LVGQ AK+ GCYVVGSA
Sbjct:   128 PLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 187

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
             GSKEKV LLK K GFDDAFNYKEE+DL AALKR FP+GIDIYF+NVG +M +A + NMN 
Sbjct:   188 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 247

Query:   131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
             +GR+AVCG+IS+Y    +     + ++IYKRI+ QGF+ +D  + Y  F+     H+R G
Sbjct:   248 HGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREG 307

Query:   191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
              I  +ED++DG+E  P A  GLF G N+GK+VV +  E
Sbjct:   308 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
 Identities = 126/218 (57%), Positives = 160/218 (73%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLSY  G+LG  G+TAYAG +E+  PKKGE V+VSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct:   126 PLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSA 185

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
             GSKEKV LLK K GFDDAFNYKEE+DL AALKR FP GID+YF+NVG +M +A + NMN 
Sbjct:   186 GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNP 245

Query:   131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
             +GR+AVCG+IS+Y    +     + ++IYKRI+ QGF+ AD  + Y  F+      ++ G
Sbjct:   246 HGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEG 305

Query:   191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
              I  +ED++DG+E  P A  GLF G N+GK+VV I  E
Sbjct:   306 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 126/225 (56%), Positives = 157/225 (69%)

Query:     4 KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG 63
             K      PLSY  G+LG  G+TAYAG +E+  PK+GE V+VSAASG+VG LVGQ+AK+ G
Sbjct:   121 KIQHTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMG 180

Query:    64 CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
             CYVVGSAGS EKV LLK K GFDDAFNYKEE DL AALKR FP GIDIYF+NVG +M +A
Sbjct:   181 CYVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDA 240

Query:   124 AIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTT 183
              + NMN +GR+AVCG+IS+Y    +     + ++IYKRI+ QGF   D    Y  F+   
Sbjct:   241 VLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFV 300

Query:   184 CNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
               H++ G I  +ED++DG+E  P A  GLF G N+GK+VV I  E
Sbjct:   301 LPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 128/225 (56%), Positives = 159/225 (70%)

Query:     4 KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG 63
             K +    PLSY  G+LG  G+TAYAG +E+  PKKGE VFVSAASG+VG LVGQ+AKL G
Sbjct:   127 KIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLMG 186

Query:    64 CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
             CYVVGSAGSKEKV LLK K GFDDAFNYKEE D  AALKRYFP+GIDIYF+NVG +M +A
Sbjct:   187 CYVVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLDA 246

Query:   124 AIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTT 183
              + NM  +GRVAVCG+IS+Y          +  ++YKRI+ QGF   D  + Y  F+   
Sbjct:   247 VLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDFV 306

Query:   184 CNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
               ++R G I  +EDI++G ES PSA  GLF+G N+GK++  +  E
Sbjct:   307 LPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 122/218 (55%), Positives = 161/218 (73%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLSY  G+LG  G+TAYAG +EI  PKKGE VFVSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct:   133 PLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCYVVGSA 192

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
             GS EKV LLK+K GFDDAFNYK E DL AALKR FP+GIDIYF+NVG +M +A + NM  
Sbjct:   193 GSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDAVLLNMKL 252

Query:   131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
             +GR+AVCG+IS+Y    +     + +VIYKRI+ +GF+ +D+ + +  F+     ++R G
Sbjct:   253 HGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLPYIREG 312

Query:   191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
              I  +ED+ +G+E+ PSA  GLF G N+GK+++ +  E
Sbjct:   313 KITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2034109 AT1G65560 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 121/219 (55%), Positives = 161/219 (73%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLSY +G+LG +G TAYAG  EI  PKKG+ VFVSAA G+VG LVGQ AKL GCYVVGSA
Sbjct:   132 PLSYHLGLLGMAGFTAYAGFNEICCPKKGDSVFVSAACGAVGQLVGQLAKLHGCYVVGSA 191

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
             GSK+KV +LK++LG+D+AFNYKEE DL  ALKRYFP+GIDIYFDNVG  M +AA+ NM  
Sbjct:   192 GSKQKVEILKNELGYDEAFNYKEEADLDTALKRYFPEGIDIYFDNVGGSMLDAALLNMKV 251

Query:   131 YGRVAVCGVIS-EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS 189
              GR+A+CG++S +      +    +   IYKR++ +GFL +D+L+++  F+     + + 
Sbjct:   252 RGRIALCGMVSLQSLSTSSQGIKNLYSAIYKRLRLEGFLQSDYLHIFPQFLENVKRYYKE 311

Query:   190 GAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
             G I  +EDIS+G++  P+A  GLF G NIGK+VVR+ +E
Sbjct:   312 GKIVYVEDISEGLDLAPAALVGLFSGKNIGKQVVRVAKE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 122/218 (55%), Positives = 157/218 (72%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLS+  G+LG  GLTAY G +EI  PKKGE VFVSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct:   136 PLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSA 195

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
              SKEKV LLK K G+D+AFNYKEE DL AALKR FP+GIDIYF+NVG +M +A + NM T
Sbjct:   196 SSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAVLENMRT 255

Query:   131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
             +GR+A CG+IS+Y   +      +  ++YKRI+ QGF A +  + Y  F+     ++R G
Sbjct:   256 HGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFILPYVREG 315

Query:   191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
              I  +EDI+ G+E+ PSA  GLF G N+GK++V +  E
Sbjct:   316 KITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 123/215 (57%), Positives = 155/215 (72%)

Query:    11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
             PLS+  G+LG  GLTAY G +EI  PKKGE VFVSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct:   136 PLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSA 195

Query:    71 GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
              S+EKV LLK K G+DDAFNYKEE DL AALKR FP+GIDIYF+NVG +M EA + NM T
Sbjct:   196 SSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAVLENMRT 255

Query:   131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
             +GR+A CG+IS+Y   K         +++KRI+ QGF A +  + Y  F+     H+R G
Sbjct:   256 HGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFILPHVREG 315

Query:   191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
              +  +EDIS G+E+ PSA  GLF G N+GK++V +
Sbjct:   316 KLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEV 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 122/223 (54%), Positives = 159/223 (71%)

Query:     4 KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG 63
             K     FPLSY  G+LG  G+TAY G +EI  PKKG+ VFVSAASG+VG LVGQ+AKL G
Sbjct:   122 KIHHTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMG 181

Query:    64 CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
             CYVVGSAGSKEKV LLK+K GFDDAFNYKEE +L  ALKR FP+GIDIYF+NVG +M +A
Sbjct:   182 CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDA 241

Query:   124 AIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTT 183
              I NM  +GR+A CG+IS+Y          +  + YKRI+ +GF   D+ + Y +F+   
Sbjct:   242 VILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFV 301

Query:   184 CNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT 226
               +++ G I  +ED++DG+ES P+A  GLF G N+GK++V ++
Sbjct:   302 VPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39172	P1_ARATH	1, ., 3, ., 1, ., 7, 4	0.5779	0.9561	0.6318	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.81	LOW CONFIDENCE prediction!
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.48	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	228
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-127
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-100
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	4e-98
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-80
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	5e-79
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-57
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	9e-51
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-44
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-25
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-25
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-24
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	4e-23
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-22
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-20
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-19
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-19
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	4e-18
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-17
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	6e-17
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-16
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-16
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	8e-16
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	8e-15
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	7e-13
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-12
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	8e-12
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	9e-12
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-10
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-10
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-10
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	6e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-08
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	3e-08
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-07
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-07
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	4e-07
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	4e-07
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	5e-07
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-07
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	5e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-06
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	7e-06
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-05
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-04
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	5e-04
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	7e-04
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	0.003
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	0.003

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  362 bits (930), Expect = e-127
 Identities = 139/225 (61%), Positives = 171/225 (76%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
            LRK D    PLSY +G+LG  GLTAYAG +E+ KPKKGE VFVSAASG+VG LVGQ AK
Sbjct: 114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK 173

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           L GCYVVGSAGS EKV LLK+KLGFDDAFNYKEE DL AALKRYFP+GIDIYFDNVG +M
Sbjct: 174 LKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKM 233

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            +A + NMN +GR+A CG+IS+Y          +L++IYKR+K QGFL  D+L+ Y +F+
Sbjct: 234 LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFL 293

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
                +++ G +  +EDI+DG+ES P AF GLF G NIGK+VV++
Sbjct: 294 EEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  294 bits (755), Expect = e-100
 Identities = 112/224 (50%), Positives = 147/224 (65%), Gaps = 2/224 (0%)

Query: 1   MLRKFDP-MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYA 59
            LRK DP +G PLS  +G+LG +GLTAY GL EIGKPK GE V VSAA+G+VG +VGQ A
Sbjct: 107 GLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIA 166

Query: 60  KLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE 119
           KL G  VVG AGS EK   L ++LGFD A NYK   DL  ALK   PDGID+YFDNVG E
Sbjct: 167 KLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGE 225

Query: 120 MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDF 179
           + +AA+  +N  GR+A+CG IS+Y   +      + ++I KR+  QGF+ +D+ + + + 
Sbjct: 226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEA 285

Query: 180 ISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
           ++     L  G +   ED+ +G+E+ P AF GLF G N GK VV
Sbjct: 286 LAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  289 bits (741), Expect = 4e-98
 Identities = 126/218 (57%), Positives = 167/218 (76%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY +G+LG +G TAYAG +E+  PKKG+ VFVSAASG+VG LVGQ AKL GCYVVGSA
Sbjct: 131 PLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSA 190

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GS +KV LLK+KLGFD+AFNYKEE DL AALKRYFP+GIDIYFDNVG +M +AA+ NM  
Sbjct: 191 GSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKI 250

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           +GR+AVCG++S  +    +    + ++I KRI+ QGFL +D+L+L+  F+     + + G
Sbjct: 251 HGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQG 310

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            I  +ED+S+G+ES P+A  GLF G N+GK+V+R+ +E
Sbjct: 311 KIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  244 bits (625), Expect = 1e-80
 Identities = 104/228 (45%), Positives = 139/228 (60%), Gaps = 3/228 (1%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
           LRK DP   PLS  +G+LG  GLTAY GL +IG+PK GE V VSAA+G+VG +VGQ AKL
Sbjct: 114 LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKL 173

Query: 62  FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
            GC VVG AG  EK   L ++LGFD   +YK E D   ALK   P GID+YF+NVG E+ 
Sbjct: 174 KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVL 232

Query: 122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLD-VIYKRIKFQGFLAADHLNLYQ-DF 179
           +A +  +N + R+ VCG IS+Y   +    P  L  ++ KR++ QGF+ A   +    + 
Sbjct: 233 DAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEA 292

Query: 180 ISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
           +      ++ G I   E I DG+E+ P AF GL  G N GK VV++ +
Sbjct: 293 LRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  239 bits (613), Expect = 5e-79
 Identities = 99/220 (45%), Positives = 139/220 (63%), Gaps = 3/220 (1%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   P S  +G+LG  GLTAY GL EI KPK GE V V+ A+G+VG LVGQ AK+ GC V
Sbjct: 112 PDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKV 171

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           +G AGS +KV  LK+ LGFD  FNYK    L+ ALK   PDGID YFDNVG E     ++
Sbjct: 172 IGCAGSDDKVAWLKE-LGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLS 229

Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEM-LDVIYKRIKFQGFLAADHLNLYQDFISTTCN 185
           +MN +GRVAVCG IS Y D + +  P +   +I+K++K +GF+     + + + +     
Sbjct: 230 HMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLK 289

Query: 186 HLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            ++ G +   E +++G E++P AF G+ +G N GK +V++
Sbjct: 290 WIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  184 bits (468), Expect = 2e-57
 Identities = 100/220 (45%), Positives = 130/220 (59%), Gaps = 3/220 (1%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL EI   K GE V V+AA+G+VG +VGQ AKL GC V
Sbjct: 107 PDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 166

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EKV  LK KLGFD AFNYK    L+  LK+  PDG D YFDNVG E     I 
Sbjct: 167 VGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIG 225

Query: 127 NMNTYGRVAVCGVISEY-TDGKKRAAPEMLDVIYKRIKFQGFLAAD-HLNLYQDFISTTC 184
            M  +GR+A+CG IS Y   G     P    VIY+ ++ +GF+       + Q  +    
Sbjct: 226 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELL 285

Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
             +  G I   E + +G E++P+AF G+ +G N+GK +V+
Sbjct: 286 KWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  167 bits (426), Expect = 9e-51
 Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 10/233 (4%)

Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGK--PKKGEKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLTA  G+ E G   P   + + VS A+G+ G L GQ
Sbjct: 114 LEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQ 173

Query: 58  YAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
             +L GC  VVG  GS EK  LLK +LGFD A NYK + ++   L+   P+G+D+YFDNV
Sbjct: 174 IGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNV 232

Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP---EMLDVIYKR-IKFQGFLAADH 172
           G E+ +  I+ MN    + +CG IS+Y        P       ++ +R I  + FL  ++
Sbjct: 233 GGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNY 292

Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            + +++ I+     ++ G +   E + +G+E+   AF  +  GGNIGK++V++
Sbjct: 293 KDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  151 bits (384), Expect = 1e-44
 Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           SGLTA   L E+G+ K GE V V+AA+G  G    Q AKL GC+V+G+  S EK   LK 
Sbjct: 123 SGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS 182

Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG D   NYK E DL   LK+ +P G+D+ +++VG EM +  + N+   GR+ V G IS
Sbjct: 183 -LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFIS 240

Query: 142 EYTDGK----KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED 197
            Y  G      + A     ++ K    +GF    +  L    +       + G +    D
Sbjct: 241 GYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVD 300

Query: 198 ISD--GVESIPSAFTGLFQGGNIGKKVVR 224
            +   G+ES+  A   L+ G NIGK VV 
Sbjct: 301 PTRFRGLESVADAVDYLYSGKNIGKVVVE 329

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  100 bits (251), Expect = 3e-25
 Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 21/217 (9%)

Query: 18  ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT 77
            L  +GLTA+  LF+    K GE V V  A+G VG    Q AK  G  VV    S EK+ 
Sbjct: 122 ALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181

Query: 78  LLKDKLGFDDAFNYKEETDLKAALKR-YFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAV 136
           LLK +LG D   NY+EE D    ++      G+D+  D VG +   A++A +   GR+  
Sbjct: 182 LLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVS 239

Query: 137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQG-FLAADHLNLYQDFISTTCNHLRSGAI--- 192
            G +S    G       +L ++ KR+  +G  L +       + ++   + L SG +   
Sbjct: 240 IGALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV 295

Query: 193 ----YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
               YPL +       +        +    GK V+++
Sbjct: 296 IDRVYPLAEAPAAAAHLLL------ERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 98.9 bits (247), Expect = 4e-25
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 9/155 (5%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L     TAY  L   G  K G+ V V  A G VG L  Q AK  G  V+ +  S EK+ L
Sbjct: 115 LPEPLATAYHALRRAGVLKPGDTVLVLGA-GGVGLLAAQLAKAAGARVIVTDRSDEKLEL 173

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVC 137
            K +LG D   +YKEE DL+  L+     G D+  D VG       A+  +   GR+ V 
Sbjct: 174 AK-ELGADHVIDYKEE-DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH 172
           G  S           ++  +++K +   G      
Sbjct: 232 GGTSGGP-----PLDDLRRLLFKELTIIGSTGGTR 261

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 98.3 bits (246), Expect = 1e-24
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 27/213 (12%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
            TA+  LF++G  K GE V +   +  VG    Q AK  G  V+ +AGS+EK+   +  L
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 84  GFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           G D A NY+ E D    +K      G+D+  D VG +     +  +   GR+ + G++  
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG- 241

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFL-----AADHLNLYQDFISTTCNHLRSGAI----- 192
              G K A  ++  ++ KR+   G         +   L   F         SG I     
Sbjct: 242 ---GAK-AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVID 297

Query: 193 --YPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
             +PLE+ ++       A   +    +IGK V+
Sbjct: 298 KVFPLEEAAE-------AHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 94.2 bits (235), Expect = 4e-23
 Identities = 56/213 (26%), Positives = 83/213 (38%), Gaps = 42/213 (19%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           +GLTA+  LFE+G  K G+ V +  A+G VG    Q AK  G  V+ +A S      L+ 
Sbjct: 128 AGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADFLRS 186

Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVA-VCGVI 140
            LG D+  +Y +    +AA     P G+D   D VG E    ++A +   GR+  + G  
Sbjct: 187 -LGADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPP 241

Query: 141 SEYTDGKKRAA----------PEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
                 K+R             E L  +         + A  L                 
Sbjct: 242 PAEQAAKRRGVRAGFVFVEPDGEQLAEL------AELVEAGKL------------RPVVD 283

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
            ++PLED ++       A   L  G   GK V+
Sbjct: 284 RVFPLEDAAE-------AHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 92.3 bits (230), Expect = 3e-22
 Identities = 63/228 (27%), Positives = 90/228 (39%), Gaps = 33/228 (14%)

Query: 12  LSYQVGI-LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           +S++ G  LG   LTAY  LF     K GE V V   SG+VGH   Q A+  G  V+ +A
Sbjct: 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATA 176

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMN 129
            S E   L++   G D  FNY+ E DL   +       G+D+  +         A  N+ 
Sbjct: 177 SSAEGAELVRQ-AGADAVFNYRAE-DLADRILAATAGQGVDVIIEV-------LANVNLA 227

Query: 130 TY-GRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL-----------AADHLNLYQ 177
                +A  G I  Y  G  R    +  ++ K    +G L           AA+ +    
Sbjct: 228 KDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA--A 285

Query: 178 DFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
                          YPLE+ +   E++ S       GG IGK V+  
Sbjct: 286 GLADGALRP-VIAREYPLEEAAAAHEAVES-------GGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 9/101 (8%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  +GLTA   L + GK K G++V ++ ASG VG    Q AK  G +V G   ++    L
Sbjct: 124 LPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAEL 182

Query: 79  LKDKLGFDDAFNYKEE--TDLKAALKRYFPDGIDIYFDNVG 117
           ++  LG D+  +Y  E    L A  ++Y     D+ FD VG
Sbjct: 183 VRS-LGADEVIDYTTEDFVALTAGGEKY-----DVIFDAVG 217

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 13/208 (6%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
            T ++ LF+ G  K GE V +   +  +G    Q AK FG  V  +AGS EK     + L
Sbjct: 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEAL 183

Query: 84  GFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           G D A NY+EE D    +K      G+D+  D VG       I  +   GR+   G    
Sbjct: 184 GADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ-- 240

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFL-----AADHLNLYQDFISTTCNHLRSGAIYPLED 197
              G ++A  ++  ++ KR+   G        A+   +  +        L SG + P+ D
Sbjct: 241 ---GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVID 297

Query: 198 ISDGVESIPSAFTGLFQGGNIGKKVVRI 225
               +E    A   +  G +IGK V+ +
Sbjct: 298 KVFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA+  L    + + GE V V  A   VG    Q AKLFG  V+ +AGS++K+   K +L
Sbjct: 152 LTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL 210

Query: 84  GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEY 143
           G D   +Y++E  ++   +     G+D+  ++VGA   E ++ ++   GR+  CG  + Y
Sbjct: 211 GADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY 270

Query: 144 TDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVE 203
                 A  ++  V ++++   G        L +         +  G + P+ D    +E
Sbjct: 271 -----EAPIDLRHVFWRQLSILGSTMGTKAELDEAL-----RLVFRGKLKPVIDSVFPLE 320

Query: 204 SIPSAFTGLFQGGNIGKKVVRI 225
               A   L      GK V+  
Sbjct: 321 EAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 81.0 bits (201), Expect = 4e-18
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 21/221 (9%)

Query: 9   GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG 68
             P++Y          TAY  L    + + GE V V  A+G VG    Q AK  G  V+ 
Sbjct: 119 ALPVTYG---------TAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIA 169

Query: 69  SAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALK-RYFPDGIDIYFDNVGAEMQEAAIAN 127
           +A S+EK+ L +  LG D   +Y++  DL+  +K      G+D+ +D VG ++ EA++ +
Sbjct: 170 AASSEEKLALARA-LGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227

Query: 128 MNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF----LAADHLNLYQDFISTT 183
           +   GR+ V G    +  G+    P  L ++ K I   G      A     L +  ++  
Sbjct: 228 LAWGGRLLVIG----FASGEIPQIPANL-LLLKNISVVGVYWGAYARREPELLRANLAEL 282

Query: 184 CNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
            + L  G I P       +E    A   L      GK V+ 
Sbjct: 283 FDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 74.7 bits (184), Expect = 3e-17
 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 51  VGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-G 108
           VG    Q AK  G   V+    S+EK+ L K +LG D   NY++E D    ++      G
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGRG 59

Query: 109 IDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF 167
           +D+  D VGA    E A+  +   GRV V G+              + D++ K +   G 
Sbjct: 60  VDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVP-----FPLRDLLLKELTILGS 114

Query: 168 LAADHLNLYQDF 179
           L        +  
Sbjct: 115 LGGGREEFEEAL 126

Length = 131

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 77.2 bits (191), Expect = 6e-17
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 10/205 (4%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTAY  L ++ + +KGE V + AA+G VG    Q A+  G  V  + GS+EK   L++  
Sbjct: 94  LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELG 153

Query: 84  GFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           G  D      +      + R     G+D+  +++  E+  A+   +  +GR    G    
Sbjct: 154 GPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDI 213

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGF----LAADHLNLYQDFISTTCNHLRSGAIYPLEDI 198
            ++ K    P       + + F       LA +   L ++ +      L +G + PL   
Sbjct: 214 LSNSKLGMRP-----FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPT 268

Query: 199 SDGVESIPSAFTGLFQGGNIGKKVV 223
                S   AF  +  G +IGK V+
Sbjct: 269 VVPSASEIDAFRLMQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L    LTAY  L E+   + G+ V ++AAS SVG    Q A   G  V+ +  + EK   
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRY-FPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137
           L   LG        EE DL A + R     G+D+ FD VG          +   G + V 
Sbjct: 185 LLA-LGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLN---LYQDFISTTCNHLRSGAIYP 194
           G +S            +   + K + F+G+   +        +  I+   + L SGA+ P
Sbjct: 243 GALSGEP-----TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP 297

Query: 195 LEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
           + D     + I  A   L  G  IGK VV  
Sbjct: 298 VVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 21/202 (10%)

Query: 25  TAYAGLFEIGKPKKGEKVFVSAASGSVG-HLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           TA   L   G  KKG+ V V+ A G VG H + Q AK  G  V+    S EK+ +LK +L
Sbjct: 150 TAVHALKRAG-VKKGDTVLVTGAGGGVGIHAI-QLAKALGARVIAVTRSPEKLKILK-EL 206

Query: 84  GFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           G D   +  +   D+K         G D+  + VG+   E ++ ++N  GR+ + G    
Sbjct: 207 GADYVIDGSKFSEDVKKLG------GADVVIELVGSPTIEESLRSLNKGGRLVLIG---- 256

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGV 202
                         +I K I+  G ++A         +      ++ G I P+ D    +
Sbjct: 257 NVTPDPAPLR-PGLLILKEIRIIGSISA---TKAD--VEEALKLVKEGKIKPVIDRVVSL 310

Query: 203 ESIPSAFTGLFQGGNIGKKVVR 224
           E I  A   L  G  +G+ V++
Sbjct: 311 EDINEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.7 bits (187), Expect = 4e-16
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+TA+ GL +    + G+ V +   +G VGH+  Q AK  G  V  +A S EK    +  
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-S 186

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137
           LG D    Y+E    +   +     G D+ FD VG E  +A+   +  YGRV   
Sbjct: 187 LGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSI 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.5 bits (184), Expect = 8e-16
 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 14/142 (9%)

Query: 9   GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK-LFGCYVV 67
            FP++Y         LTAY  LFE+G  + G+ V V +A+G VG   GQ  K +    VV
Sbjct: 118 AFPVNY---------LTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVV 168

Query: 68  GSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIAN 127
           G+A S  K   LK+  G     +Y+ + D    +K+  P+G+DI  D +G E    +   
Sbjct: 169 GTA-SASKHEALKE-NGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDL 225

Query: 128 MNTYGRVAVCGVISEYTDGKKR 149
           +   GR+ V G  +    G+KR
Sbjct: 226 LKPMGRLVVYGA-ANLVTGEKR 246

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 72.1 bits (178), Expect = 5e-15
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 21  FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80
             GLTA+  L E    K G+ V V AA+G VG L+ Q+AK  G  V+G+  S+EK  L +
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 81  DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIA 126
              G D   NY++E D    ++      G+D+ +D VG +  E ++ 
Sbjct: 179 -AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLD 223

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.9 bits (177), Expect = 8e-15
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           +GLTAY  LF+  + + G  + ++  +G VG    Q AK  G  V+ +  SK     +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
            LG D   +Y +E   +   +     G+D   D VG E   A
Sbjct: 183 SLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAA 224

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 7e-13
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA+  L + G  KKG+ V + A +  VG    Q A+ +G   + +  S+EKV   K KL
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KL 184

Query: 84  GFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVI 140
                  Y +E      +K+     G+++  D VG     + A +  ++  G+  V G +
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVD--GKWIVYGFM 242

Query: 141 SEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ-----DFISTTCNHLRSGAIYPL 195
                G K     +L ++ KR            + Y+      F      ++  G I P+
Sbjct: 243 G----GAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI 298

Query: 196 EDISDGVESIPSAFTGLFQGGNIGKKVV 223
            D +  +E +  A T L Q  NIGK V+
Sbjct: 299 VDRTYPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 23/209 (11%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           GLTA+  LF +G  K G+ V V    G V     Q+AK  G  V+ ++ S EK+   K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 83  LGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
           LG D   NY+   D    + +     G+D   +  G      +I  +   G +++ G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLA---ADHLNLYQDFISTTCNHLRS--GAIYPLE 196
                   A   +L ++ K    +G      A    + +  I    + +R     ++P E
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNR-AIEA--HRIRPVIDRVFPFE 314

Query: 197 DISDGVESIPSAFTGLFQGGNIGKKVVRI 225
           +          A+  L  G + GK V+R+
Sbjct: 315 E-------AKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 62.8 bits (153), Expect = 8e-12
 Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 27/213 (12%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LT     F      KGE + +  A+G  G +  Q A+L G  +  +A S +K+  LK +
Sbjct: 106 FLTVIDA-FARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-Q 163

Query: 83  LGFDDAFNYKEETDLKAALKRYFP-DGIDIYFDNVGAEMQEAAIANMNTYGR---VAVCG 138
           LG     NY EE D +  + R     G+D+  + +  E  +  +  +   GR   +A+  
Sbjct: 164 LGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTA 222

Query: 139 VISEYTDGKKRAAPEMLDVIYKRIKFQ-------GFLAADHLNLYQ-DFISTTCNHLRSG 190
           +        K A    L V+     F          L  + +  YQ + +S        G
Sbjct: 223 L--------KSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLV----EEG 270

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
            + P        + I  A+  L    NIGK VV
Sbjct: 271 ELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 63.0 bits (154), Expect = 9e-12
 Identities = 55/204 (26%), Positives = 81/204 (39%), Gaps = 23/204 (11%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+T Y  L +    K G+ V V  A G +GH+  QYAK  G  V+    S+EK+ L K K
Sbjct: 152 GITTYRALKKANV-KPGKWVAVVGAGG-LGHMAVQYAKAMGAEVIAITRSEEKLELAK-K 208

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           LG D   N  +   L+A  +       D   D VG    E ++  +   G + + G    
Sbjct: 209 LGADHVINSSDSDALEAVKEIA-----DAIIDTVGPATLEPSLKALRRGGTLVLVG---- 259

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFL---AADHLNLYQDFISTTCNHLRSGAIYPLEDIS 199
              G          +I K I   G L    AD      DF +        G I P    +
Sbjct: 260 LPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEAL-DFAA-------EGKIKPEILET 311

Query: 200 DGVESIPSAFTGLFQGGNIGKKVV 223
             ++ I  A+  + +G   G+ V+
Sbjct: 312 IPLDEINEAYERMEKGKVRGRAVI 335

Length = 339

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 19  LGFSGLTAYAGLFEIG----KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           L ++GLTA++ L  +G    K   G++V +   SG VG    Q  K +G +V  +  S +
Sbjct: 139 LPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STD 197

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE 119
            + L+K  LG DD  +Y  E   +   +R      D+  D VG +
Sbjct: 198 AIPLVK-SLGADDVIDYNNEDFEEELTER---GKFDVILDTVGGD 238

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G TA  GL ++     G+ V V+AA+G +G L+ Q AK  G  VVG+AG   K  L++  
Sbjct: 128 GRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-A 185

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
           LG D A +Y          +     G+ +  D VG  +  AA+A +   GR    G
Sbjct: 186 LGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYG 241

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 58.2 bits (142), Expect = 3e-10
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTAY  L ++ + + GE V + AA+G VG    Q A+  G  V  +AGS EK   L   L
Sbjct: 89  LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFL-RAL 147

Query: 84  GFDDA 88
           G  D 
Sbjct: 148 GIPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 25  TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLKDKL 83
           TAY G  E    + G  V V  A G +G L    AKL G   V+    S E++ L K+  
Sbjct: 155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG 213

Query: 84  GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISE 142
           G D   N  E+      L+     G D+  + VG+    + A+  +   G V V GV   
Sbjct: 214 GADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGV--- 270

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISD-- 200
              G +        V+ K +  +G L       ++       + L SG I P + I+   
Sbjct: 271 --YGGEDIPLPAGLVVSKELTLRGSLRPSGREDFER----ALDLLASGKIDPEKLITHRL 324

Query: 201 GVESIPSAFTGLFQGGNIGKKVV 223
            ++    A+           KVV
Sbjct: 325 PLDDAAEAYELFADRKEEAIKVV 347

Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 30/211 (14%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
            TA+  LF     + G+ + +   + SVG    + AK  G  V  +  S E+  LLK +L
Sbjct: 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-EL 186

Query: 84  GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEY 143
           G D+     ++  +   L+   P G D   + VG    + ++ ++   G V + G++   
Sbjct: 187 GADEVV--IDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGG- 242

Query: 144 TDGKKRAAPEM-----LDVIYKRIK------FQGFLAADHLNLYQDFISTTCNHLRSGAI 192
                     +     +D I   +         G +    L    DF++     +    +
Sbjct: 243 -------QWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKV 295

Query: 193 YPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
           +  ++I +    + S           GK VV
Sbjct: 296 FTFDEIVEAHAYMES-------NRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 52.9 bits (128), Expect = 3e-08
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG--SAGSKEKVTLL 79
           +G+T Y  L + G  K G+ V +S A G +GHL  QYAK  G  V+       K ++   
Sbjct: 150 AGVTVYKALKKAG-LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK- 207

Query: 80  KDKLGFDDAFNYKEETDLKAALK 102
             +LG D   ++K+  D++A  +
Sbjct: 208 --ELGADAFVDFKKSDDVEAVKE 228

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 25/207 (12%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           S  TA   + E      GE V V+ ASG VG  + Q AK  G  V+  AG   K   ++ 
Sbjct: 162 SYSTAE-NMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVRA 219

Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG  D    ++   L  A K    + +D+  D VG  +    +  +   GR    G I 
Sbjct: 220 -LG-ADTVILRDAPLLADA-KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI- 275

Query: 142 EYTDGKKRAAP----EMLDVIYKRIKFQGF-LAADHLNLYQDFISTTCNHLRSGAIYPLE 196
                   A P    ++  +  K +   G  L      +++  +     ++  G I P+ 
Sbjct: 276 --------AGPVVELDLRTLYLKDLTLFGSTLGTRE--VFRRLVR----YIEEGEIRPVV 321

Query: 197 DISDGVESIPSAFTGLFQGGNIGKKVV 223
             +  +  I  A     +  ++GK V+
Sbjct: 322 AKTFPLSEIREAQAEFLEKRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 18  ILGFSGLTAYAGLFEI----GKPKKGEKVFVSAASGSVGHL-VGQYAKLFGCYVVGSAGS 72
           ILG +G TA   +  +      P+ G  V V+ A+G VG + V   AKL G  VV   G 
Sbjct: 123 ILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKL-GYTVVALTGK 180

Query: 73  KEKVTLLKDKLGFDDAFNYKE--ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           +E+   LK  LG  +  + ++  +   K  LK  +   ID     VG ++    +     
Sbjct: 181 EEQADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID----TVGGDVLANLLKQTKY 235

Query: 131 YGRVAVCG 138
            G VA CG
Sbjct: 236 GGVVASCG 243

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 14/148 (9%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           + LT Y  +   G+ K GE V V    G   + V Q AK  G  V+     +EK+ L K 
Sbjct: 149 AVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAV-QIAKAMGAAVIAVDIKEEKLELAK- 206

Query: 82  KLGFDDAFNYKEET--DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG 138
           +LG D+  N  +++  D KAA       G D+ FD VG     E A   +   GR+ V G
Sbjct: 207 ELGADEVLNSLDDSPKDKKAAGL---GGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVG 263

Query: 139 VISEYTDGKKRAAPEMLDVIYKRIKFQG 166
           +      G+ +   ++ D+I + ++  G
Sbjct: 264 L------GRDKLTVDLSDLIARELRIIG 285

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 19/218 (8%)

Query: 19  LGFSGLTAYAGLF----------EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG 68
           L    +TA   LF          +     KG+ V +   S SVG L  Q AKL G  V+ 
Sbjct: 125 LPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVIT 184

Query: 69  SAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIAN- 127
           +A S +   L+K  LG D  F+Y  + D+   ++      +    D +         A  
Sbjct: 185 TA-SPKNFDLVK-SLGADAVFDYH-DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241

Query: 128 MNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHL 187
           +   G   +  ++    + + R   ++  V+   +  +     +   ++  ++      L
Sbjct: 242 LGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPEL---L 298

Query: 188 RSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
             G +   P+  +  G+E +      L +G   G+K+V
Sbjct: 299 EEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLV 336

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 28/219 (12%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            +TAY  L    K   G++V +  ASG VG  + + A L G  V G+A S+     L++ 
Sbjct: 124 YVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALREL 182

Query: 83  LG--FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI 140
                D                   P G+D+ FD VG E  E + A +   G +   G  
Sbjct: 183 GATPID-------YRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235

Query: 141 SEYTDGKKRAAP--EMLDVIY--------KRIKFQGFLAAD---HLNLYQDFISTTCNHL 187
           S    G++  A    +L  +         +R  F  ++  D      L++  ++   + L
Sbjct: 236 SSLLQGRRSLAALGSLLARLAKLKLLPTGRRATF-YYVWRDRAEDPKLFRQDLTELLDLL 294

Query: 188 RSGAIYPLEDISDGV--ESIPSAFTGLFQGGNIGKKVVR 224
             G I P   I+  +    +  A   L  G  +GK V+ 
Sbjct: 295 AKGKIRPK--IAKRLPLSEVAEAHRLLESGKVVGKIVLL 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+T Y+ L + G P+ GE+V V    G  GHL  QYA+  G   V    S +K  L + K
Sbjct: 148 GITVYSALRDAG-PRPGERVAVLGIGGL-GHLAVQYARAMGFETVAITRSPDKRELAR-K 204

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           LG D+  +   E D +AA      D I +     GA   EAA+  +   GR+ + G+   
Sbjct: 205 LGADEVVDSGAELDEQAAAGGA--DVI-LVTVVSGAAA-EAALGGLRRGGRIVLVGL--- 257

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQG 166
                   +P++  +I KR    G
Sbjct: 258 --PESPPFSPDIFPLIMKRQSIAG 279

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 27/206 (13%)

Query: 25  TAYAGLFEIGKPKKGEKVFVSAASGSVG-HLVGQYAKLFGCYVVGSAGSKEKVTLLK--- 80
             Y GL   G  KKGE V V+ A G VG H + Q AK  G  V+    S+ K  ++    
Sbjct: 150 MVYRGLRRAGV-KKGETVLVTGAGGGVGIHAI-QVAKALGAKVIAVTSSESKAKIVSKYA 207

Query: 81  DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI 140
           D +     F+  EE      +K+    G DI  + VG    E ++ ++N  G++   G +
Sbjct: 208 DYVIVGSKFS--EE------VKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNV 257

Query: 141 SEYTDGKKRAAPEMLD-VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDIS 199
                         L  +I K I+  G ++A   ++           +  G I P+    
Sbjct: 258 D-----PSPTYSLRLGYIILKDIEIIGHISATKRDV-----EEALKLVAEGKIKPVIGAE 307

Query: 200 DGVESIPSAFTGLFQGGNIGKKVVRI 225
             +  I  A   L     IGK +V+ 
Sbjct: 308 VSLSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 12/194 (6%)

Query: 35  KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE 93
               G+ V V  A G++G L  Q+ K+ G   V+      EK+ + + +LG DD  N KE
Sbjct: 156 GITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKE 213

Query: 94  ETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGV-ISEYTDGKKRAA 151
           E D++   +     G D+  +  G+    E A+A     G+V + G+   + T  ++   
Sbjct: 214 E-DVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEE--- 269

Query: 152 PEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISD--GVESIPSAF 209
                ++ K +  QG   +       D   T  + L SG I     I+    +E  P+AF
Sbjct: 270 -AFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAF 328

Query: 210 TGLFQGGNIGKKVV 223
             L        KV+
Sbjct: 329 ERLADREEFSGKVL 342

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 24/203 (11%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA+  L E  K   G+ V  +AA+ +VG ++ Q AKL G   +      E+V  LK  L
Sbjct: 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-L 182

Query: 84  GFDDAFNYKEET---DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI 140
           G D+  +   E     +K A       G  +  D VG E       ++   G +   G++
Sbjct: 183 GADEVIDSSPEDLAQRVKEATGG---AGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239

Query: 141 SEYTDGKKRAAPEMLDVIYKRIKFQGF-----LAADHLNLYQDFISTTCNHLRSG----- 190
           S    G+    P  +  I+K I  +GF     L +      Q+  +     + +G     
Sbjct: 240 S----GEPVPFPRSV-FIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP 294

Query: 191 --AIYPLEDISDGVESIPSAFTG 211
             A +PLED  + V +      G
Sbjct: 295 VGAKFPLEDFEEAVAAAEQPGRG 317

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           GLT Y  L +  + K  E+    AA+G VG +  Q+AK  G  ++G+ GS +K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAI 125
            G     NY+EE  ++   +      + + +D+VG +  EA++
Sbjct: 185 -GAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASL 226

Length = 327

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 14  YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-S 72
            +  +LG +G TAY  L      + GE V V    G VG    Q AK FG   + +    
Sbjct: 163 TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV-GGVGSSAIQLAKAFGASPIIAVDVR 221

Query: 73  KEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ-EAAIANMNTY 131
            EK+   K +LG     N  +E  + A  +     G+D+  + +G     + A+  +   
Sbjct: 222 DEKLAKAK-ELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG 280

Query: 132 GRVAVCG 138
           GR  V G
Sbjct: 281 GRAVVVG 287

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           Q   L  +G+TA   L   G P  G +V V+ ASG VG    Q A L G +VV   GS  
Sbjct: 110 QAATLPVAGVTALRALRRGG-PLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPA 168

Query: 75  KVTLLKDKLG 84
           +   L++   
Sbjct: 169 RAEGLRELGA 178

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 47/212 (22%), Positives = 73/212 (34%), Gaps = 46/212 (21%)

Query: 16  VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE 74
             +LG    T    +    K + G+ V V    G VG    Q AK  G   ++    + E
Sbjct: 163 ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPE 221

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGR 133
           K+ L K K G     N KE  D+  A+      G D  F+ VG  E+   A+   +  G 
Sbjct: 222 KLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGT 280

Query: 134 VAVCGVI---------------------SEYTDGKKRA-APEMLDVIYKRIKFQGFLAAD 171
             + GV                      S +   + R+  P ++D +Y   K        
Sbjct: 281 SVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVD-LYMAGKLP------ 333

Query: 172 HLNLYQDFISTTCNHLRSGAIYPLEDISDGVE 203
                   ++ T          PLEDI++  +
Sbjct: 334 ----LDRLVTHT---------IPLEDINEAFD 352

Length = 366

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 13/127 (10%)

Query: 18  ILGFSGLTAYAGLFEIGK----PKKGEKVFVSAASGSVGHL-VGQYAKLFGCYVVGSAGS 72
            LG +G TA   +  + +    P+ G  V V+ A+G VG L V   +KL G  VV S G 
Sbjct: 122 ALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTGK 179

Query: 73  KEKVTLLKDKLGFDDAFNYKEETD-LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTY 131
            E+   LK +LG  +  + ++ +   K   K  +   +D     VG       +A +   
Sbjct: 180 AEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAVD----TVGGHTLANVLAQLKYG 234

Query: 132 GRVAVCG 138
           G VA CG
Sbjct: 235 GAVAACG 241

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  + LTAY  L   G    GE V V  ASG+ G    Q AK+ G  V+  +        
Sbjct: 144 LPVAALTAYHALKTAGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRKD----W 198

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
           LK+  G D+  +Y E  +    + +      D+  +++G+   + +++ +   GR+   G
Sbjct: 199 LKE-FGADEVVDYDEVEEKVKEITKMA----DVVINSLGSSFWDLSLSVLGRGGRLVTFG 253

Query: 139 VIS 141
            ++
Sbjct: 254 TLT 256

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD-- 81
            TAY  L +  K + G+ V  + A+ +VG  V Q AKL G   +     +  +  LK+  
Sbjct: 132 CTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL 191

Query: 82  -KLGFDDAFNYKEETDLKAA--LKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVC- 137
             LG D     +E   L A   LK        +  + VG    ++A              
Sbjct: 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG---KSATELARLLSPGGTMV 248

Query: 138 --GVISEYTDGKKRAAPEMLDVIYKRIKFQGF 167
             G +S    G+    P  L +I+K I  +GF
Sbjct: 249 TYGGMS----GQPVTVPTSL-LIFKDITLRGF 275

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 12/129 (9%)

Query: 12  LSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSA 70
           L  +   L     TA  G+    +P+ GE+V V    G VG L  Q AK  G   VVG  
Sbjct: 72  LPPERAALTALAATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVG-- 127

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMN 129
                V     +    +A    +              G D+  +  G     E A+  + 
Sbjct: 128 -----VDPDAARRELAEALGPADPV-AADTADEIGGRGADVVIEASGSPSALETALRLLR 181

Query: 130 TYGRVAVCG 138
             GRV + G
Sbjct: 182 DRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA  G+ E  + +  + V  +AA+ ++G ++ +  K  G  V+     KE+V LLK  +
Sbjct: 130 LTAL-GMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I 187

Query: 84  GFDDAFNYKEET---DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI 140
           G +   N  +     DLK  + +       I+FD VG  +    +  M     + V G +
Sbjct: 188 GAEYVLNSSDPDFLEDLKELIAKL---NATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244

Query: 141 SEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
           S    GK     + +D+I+K    +GF 
Sbjct: 245 S----GKLDEPIDPVDLIFKNKSIEGFW 268

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	228
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.97
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.97
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.97
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.97
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.97
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.97
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.97
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.96
PLN02827	378	Alcohol dehydrogenase-like	99.96
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.96
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.96
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.96
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.96
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.96
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.96
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.96
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.96
PLN02740	381	Alcohol dehydrogenase-like	99.96
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.96
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	99.96
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.95
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.95
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.95
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.95
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.95
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.95
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.95
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.95
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.95
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.95
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.95
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.95
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.94
PTZ00354	334	alcohol dehydrogenase; Provisional	99.94
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.94
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.94
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.94
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.94
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.94
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.94
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.94
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.94
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.94
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.94
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.94
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.94
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.94
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.94
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.93
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.93
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.93
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.93
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.93
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.93
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.93
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.93
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.93
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.93
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.93
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.93
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.92
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.92
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.92
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.92
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.92
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.92
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.92
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.92
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.92
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.92
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.92
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.92
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.92
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.92
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.92
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.92
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.92
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.92
PRK10083	339	putative oxidoreductase; Provisional	99.92
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.91
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.91
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.91
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.91
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.91
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.91
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.91
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.91
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.91
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.91
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.91
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.9
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.9
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.9
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.9
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.9
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.9
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.9
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.89
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.89
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.89
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.89
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.89
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.89
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.89
PLN02702	364	L-idonate 5-dehydrogenase	99.89
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.89
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.88
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.87
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.87
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.87
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.86
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.86
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.84
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.67
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.57
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.57
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.97
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.94
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.78
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.71
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.63
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.62
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.6
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.56
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.52
PLN02494	477	adenosylhomocysteinase	98.5
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.45
PRK05693	274	short chain dehydrogenase; Provisional	98.45
PRK08324	681	short chain dehydrogenase; Validated	98.44
PRK05993	277	short chain dehydrogenase; Provisional	98.43
PRK12742	237	oxidoreductase; Provisional	98.43
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.43
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.39
PRK06182	273	short chain dehydrogenase; Validated	98.38
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.36
PRK08265	261	short chain dehydrogenase; Provisional	98.35
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.32
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	98.3
PRK08339	263	short chain dehydrogenase; Provisional	98.28
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.27
PRK05872	296	short chain dehydrogenase; Provisional	98.27
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.25
PRK07109	334	short chain dehydrogenase; Provisional	98.23
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	98.2
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.18
PRK06500	249	short chain dehydrogenase; Provisional	98.18
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.17
PRK12829	264	short chain dehydrogenase; Provisional	98.16
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.16
PRK06057	255	short chain dehydrogenase; Provisional	98.16
PRK06484	520	short chain dehydrogenase; Validated	98.16
PRK09186	256	flagellin modification protein A; Provisional	98.15
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.14
PRK06484	520	short chain dehydrogenase; Validated	98.12
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	98.11
PRK07326	237	short chain dehydrogenase; Provisional	98.11
PRK06139	330	short chain dehydrogenase; Provisional	98.11
PRK07806	248	short chain dehydrogenase; Provisional	98.11
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.11
PRK07825	273	short chain dehydrogenase; Provisional	98.11
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.11
PRK08267	260	short chain dehydrogenase; Provisional	98.1
PRK07060	245	short chain dehydrogenase; Provisional	98.09
PLN03209	576	translocon at the inner envelope of chloroplast su	98.08
PRK12939	250	short chain dehydrogenase; Provisional	98.08
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.08
PRK12828	239	short chain dehydrogenase; Provisional	98.08
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	98.06
PRK08017	256	oxidoreductase; Provisional	98.05
PRK07576	264	short chain dehydrogenase; Provisional	98.05
PRK06196	315	oxidoreductase; Provisional	98.05
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	98.05
PRK07832	272	short chain dehydrogenase; Provisional	98.04
PRK07062	265	short chain dehydrogenase; Provisional	98.04
PLN02780	320	ketoreductase/ oxidoreductase	98.03
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.03
PRK07063	260	short chain dehydrogenase; Provisional	98.03
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	98.02
PRK05854	313	short chain dehydrogenase; Provisional	98.01
PRK05867	253	short chain dehydrogenase; Provisional	98.01
PRK08177	225	short chain dehydrogenase; Provisional	98.01
PRK05866	293	short chain dehydrogenase; Provisional	98.0
PRK06180	277	short chain dehydrogenase; Provisional	97.99
PRK07831	262	short chain dehydrogenase; Provisional	97.98
PRK07814	263	short chain dehydrogenase; Provisional	97.98
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.98
PRK06128	300	oxidoreductase; Provisional	97.98
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.98
PRK06841	255	short chain dehydrogenase; Provisional	97.98
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.97
PRK07890	258	short chain dehydrogenase; Provisional	97.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.96
PRK05876	275	short chain dehydrogenase; Provisional	97.96
PRK05717	255	oxidoreductase; Validated	97.95
PRK06949	258	short chain dehydrogenase; Provisional	97.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.95
PRK07478	254	short chain dehydrogenase; Provisional	97.94
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.94
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	97.94
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.93
PRK06194	287	hypothetical protein; Provisional	97.92
PRK07024	257	short chain dehydrogenase; Provisional	97.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.91
COG4122	219	Predicted O-methyltransferase [General function pr	97.91
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.91
PRK07677	252	short chain dehydrogenase; Provisional	97.89
PLN02253	280	xanthoxin dehydrogenase	97.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.89
PRK06197	306	short chain dehydrogenase; Provisional	97.89
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.89
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.88
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.88
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.87
KOG0725	270	consensus Reductases with broad range of substrate	97.86
PRK06953	222	short chain dehydrogenase; Provisional	97.86
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.86
PRK05884	223	short chain dehydrogenase; Provisional	97.86
PRK08643	256	acetoin reductase; Validated	97.86
PRK08862	227	short chain dehydrogenase; Provisional	97.85
PRK08589	272	short chain dehydrogenase; Validated	97.85
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.85
PRK07774	250	short chain dehydrogenase; Provisional	97.85
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.85
PRK09242	257	tropinone reductase; Provisional	97.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.84
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.83
PRK07067	257	sorbitol dehydrogenase; Provisional	97.83
PRK09291	257	short chain dehydrogenase; Provisional	97.83
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.82
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.82
PRK09072	263	short chain dehydrogenase; Provisional	97.82
PRK06482	276	short chain dehydrogenase; Provisional	97.82
PRK10538	248	malonic semialdehyde reductase; Provisional	97.82
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.81
PRK07904	253	short chain dehydrogenase; Provisional	97.8
PRK08251	248	short chain dehydrogenase; Provisional	97.8
PRK06138	252	short chain dehydrogenase; Provisional	97.79
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.79
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.79
PRK06483	236	dihydromonapterin reductase; Provisional	97.79
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.79
PRK07985	294	oxidoreductase; Provisional	97.79
PRK06179	270	short chain dehydrogenase; Provisional	97.79
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.79
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.78
PRK06914	280	short chain dehydrogenase; Provisional	97.78
PRK06172	253	short chain dehydrogenase; Provisional	97.78
PRK08263	275	short chain dehydrogenase; Provisional	97.78
PRK07035	252	short chain dehydrogenase; Provisional	97.77
PRK06720	169	hypothetical protein; Provisional	97.77
PRK07454	241	short chain dehydrogenase; Provisional	97.76
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.76
PRK05875	276	short chain dehydrogenase; Provisional	97.76
PRK08703	239	short chain dehydrogenase; Provisional	97.76
PRK07074	257	short chain dehydrogenase; Provisional	97.75
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.75
PRK06181	263	short chain dehydrogenase; Provisional	97.75
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.73
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.73
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.73
PRK12937	245	short chain dehydrogenase; Provisional	97.73
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.72
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.72
PRK06398	258	aldose dehydrogenase; Validated	97.72
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.72
PRK06125	259	short chain dehydrogenase; Provisional	97.71
PRK06198	260	short chain dehydrogenase; Provisional	97.71
PRK08628	258	short chain dehydrogenase; Provisional	97.71
PRK07791	286	short chain dehydrogenase; Provisional	97.7
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.69
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.69
PLN02476	278	O-methyltransferase	97.69
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	97.69
KOG1208	314	consensus Dehydrogenases with different specificit	97.69
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.68
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.68
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.67
PRK07856	252	short chain dehydrogenase; Provisional	97.67
PRK06114	254	short chain dehydrogenase; Provisional	97.66
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.65
PRK12367	245	short chain dehydrogenase; Provisional	97.65
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.65
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.65
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.65
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.65
PRK12747	252	short chain dehydrogenase; Provisional	97.65
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.64
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	97.64
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.64
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.64
PRK08226	263	short chain dehydrogenase; Provisional	97.64
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.64
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.63
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.63
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.63
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.62
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.62
TIGR00438	188	rrmJ cell division protein FtsJ.	97.62
PRK08303	305	short chain dehydrogenase; Provisional	97.61
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.6
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.6
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.6
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.59
PRK06940	275	short chain dehydrogenase; Provisional	97.59
PRK06101	240	short chain dehydrogenase; Provisional	97.58
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.57
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.57
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.56
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.56
PRK05650	270	short chain dehydrogenase; Provisional	97.55
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	97.55
PRK07402	196	precorrin-6B methylase; Provisional	97.55
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.54
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.54
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.54
CHL00194	317	ycf39 Ycf39; Provisional	97.54
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	97.53
PRK07577	234	short chain dehydrogenase; Provisional	97.53
PRK04148	134	hypothetical protein; Provisional	97.53
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.52
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.52
PRK00811	283	spermidine synthase; Provisional	97.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.52
PRK07775	274	short chain dehydrogenase; Provisional	97.52
PRK12743	256	oxidoreductase; Provisional	97.51
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.5
PLN02366	308	spermidine synthase	97.5
PLN02589	247	caffeoyl-CoA O-methyltransferase	97.49
PRK07069	251	short chain dehydrogenase; Validated	97.48
PRK11207	197	tellurite resistance protein TehB; Provisional	97.48
PRK06523	260	short chain dehydrogenase; Provisional	97.47
PRK09135	249	pteridine reductase; Provisional	97.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.47
PRK05599	246	hypothetical protein; Provisional	97.46
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.46
PRK08278	273	short chain dehydrogenase; Provisional	97.46
PRK09134	258	short chain dehydrogenase; Provisional	97.45
PRK05855	582	short chain dehydrogenase; Validated	97.44
PLN02244	340	tocopherol O-methyltransferase	97.44
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.44
PLN00203	519	glutamyl-tRNA reductase	97.43
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.43
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	97.42
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.42
PLN00015	308	protochlorophyllide reductase	97.42
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.42
PRK07201	657	short chain dehydrogenase; Provisional	97.42
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.42
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.41
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	97.41
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	97.41
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.41
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PRK08264	238	short chain dehydrogenase; Validated	97.4
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.39
PRK12746	254	short chain dehydrogenase; Provisional	97.38
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.38
PRK07102	243	short chain dehydrogenase; Provisional	97.36
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.35
COG2910	211	Putative NADH-flavin reductase [General function p	97.35
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	97.33
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	97.32
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.31
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.3
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	97.3
PRK01581	374	speE spermidine synthase; Validated	97.3
PLN03075	296	nicotianamine synthase; Provisional	97.3
PRK06701	290	short chain dehydrogenase; Provisional	97.29
PRK04457	262	spermidine synthase; Provisional	97.29
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	97.25
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.24
PRK10258	251	biotin biosynthesis protein BioC; Provisional	97.24
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.24
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.24
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	97.23
PRK08219	227	short chain dehydrogenase; Provisional	97.22
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.22
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.21
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	97.2
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.2
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.2
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.19
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.17
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.17
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.16
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.16
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.16
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.16
PRK12744	257	short chain dehydrogenase; Provisional	97.16
PRK08317	241	hypothetical protein; Provisional	97.16
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	97.14
PRK06123	248	short chain dehydrogenase; Provisional	97.14
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.13
PRK07041	230	short chain dehydrogenase; Provisional	97.13
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.12
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.12
PLN02233	261	ubiquinone biosynthesis methyltransferase	97.12
PRK07578	199	short chain dehydrogenase; Provisional	97.12
PRK08309	177	short chain dehydrogenase; Provisional	97.12
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	97.11
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.1
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.1
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.09
PRK08618	325	ornithine cyclodeaminase; Validated	97.09
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.09
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	97.07
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	97.06
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.06
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	97.06
PRK13255	218	thiopurine S-methyltransferase; Reviewed	97.06
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.06
PRK07023	243	short chain dehydrogenase; Provisional	97.04
PRK00536	262	speE spermidine synthase; Provisional	97.04
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	97.04
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.03
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	97.03
PRK14967	223	putative methyltransferase; Provisional	97.02
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	97.01
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	97.01
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.99
PRK12827	249	short chain dehydrogenase; Provisional	96.99
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.97
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.94
PLN02653	340	GDP-mannose 4,6-dehydratase	96.94
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.93
PRK08655	437	prephenate dehydrogenase; Provisional	96.93
COG1028	251	FabG Dehydrogenases with different specificities (	96.92
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.92
PLN02686	367	cinnamoyl-CoA reductase	96.91
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	96.91
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	96.91
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.91
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.9
PRK07340	304	ornithine cyclodeaminase; Validated	96.89
PLN00016	378	RNA-binding protein; Provisional	96.89
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	96.85
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	96.85
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.85
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.84
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.84
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.83
PRK04266	226	fibrillarin; Provisional	96.83
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.83
PRK07574	385	formate dehydrogenase; Provisional	96.82
PRK06924	251	short chain dehydrogenase; Provisional	96.82
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.82
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.82
PLN03139	386	formate dehydrogenase; Provisional	96.81
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.81
PRK13243	333	glyoxylate reductase; Reviewed	96.81
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	96.8
PLN02336	475	phosphoethanolamine N-methyltransferase	96.8
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.79
PLN02823	336	spermine synthase	96.77
PLN02928	347	oxidoreductase family protein	96.76
PRK14982	340	acyl-ACP reductase; Provisional	96.75
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.75
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	96.75
PRK14968	188	putative methyltransferase; Provisional	96.74
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.74
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	96.72
PRK14903	431	16S rRNA methyltransferase B; Provisional	96.71
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.7
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.69
PRK14902	444	16S rRNA methyltransferase B; Provisional	96.68
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.67
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	96.67
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	96.66
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	96.65
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.64
PRK14901	434	16S rRNA methyltransferase B; Provisional	96.63
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	96.61
PRK06849	389	hypothetical protein; Provisional	96.61
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.6
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.6
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.58
PRK10901	427	16S rRNA methyltransferase B; Provisional	96.57
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.57
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.56
PLN02214	342	cinnamoyl-CoA reductase	96.56

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4.2e-35  Score=233.23  Aligned_cols=216  Identities=30%  Similarity=0.477  Sum_probs=186.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +.++ |+++++. ++|++++.++|||++|....++++|++|||+||+|++|.+++|+||.+|+.+++++.++++.++++ 
T Consensus       108 ~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-  184 (326)
T COG0604         108 LVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-  184 (326)
T ss_pred             ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-
Confidence            5678 9999999 999999999999999999899999999999999999999999999999987777777888878888 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|+++++++.+. ++.+++++++++ ++|+|+|+.|++.+..++++|+++|+++.+|..++    ......+...++.+
T Consensus       185 ~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~  259 (326)
T COG0604         185 ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGK  259 (326)
T ss_pred             hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhc
Confidence            9999999999987 899999999998 99999999999999999999999999999998774    11223456777778


Q ss_pred             hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHc-CCCcceEEEEe
Q 027106          161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQ-GGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvl~~  225 (228)
                      .+...++..... ++...+.++++.+++.+|.+++.+..+||+++...|...... ++..||+||++
T Consensus       260 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         260 RLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            888888776642 355568899999999999999999999999996555544433 57889999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=215.91  Aligned_cols=218  Identities=23%  Similarity=0.306  Sum_probs=193.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +.++ |+.+++. ++|++...++|||..+++..++++|++||+|.|+||+|+++.|+++..|+.++++.++.++++.++ 
T Consensus       112 v~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-  188 (336)
T KOG1197|consen  112 VFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-  188 (336)
T ss_pred             eccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-
Confidence            4678 9999999 888999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      +.|+++.++++.+ |+.+++.+++.+ |+|+++|.+|.+.+..++.+|++.|.+|.+|+.++.     ..++++..+-.+
T Consensus       189 enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k  262 (336)
T KOG1197|consen  189 ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPK  262 (336)
T ss_pred             hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChh
Confidence            9999999999987 999999999987 999999999999999999999999999999987653     235556666666


Q ss_pred             hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106          161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE  228 (228)
Q Consensus       161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~  228 (228)
                      ++++.-..+..+   ++.......++..++.+|.+++.+.++|||+++.+|+..+++....||+++.+.++
T Consensus       263 ~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  263 ALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             hhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            666654443333   44445577888889999999999999999999999999999999999999998764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-34  Score=231.06  Aligned_cols=224  Identities=56%  Similarity=0.994  Sum_probs=187.2

Q ss_pred             cCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 027106            4 KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus         4 ~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~   83 (228)
                      ++ |++++++.++|+++++++|||+++...+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++
T Consensus       125 ~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l  203 (348)
T PLN03154        125 QL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL  203 (348)
T ss_pred             cC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc
Confidence            45 88888764588999999999999988899999999999999999999999999999999999999999999886469


Q ss_pred             CCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhce
Q 027106           84 GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIK  163 (228)
Q Consensus        84 g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  163 (228)
                      |++.++++.+..++.+.+++.+++++|++|||+|+..+..++++++++|+++.+|..++..........+...++.++++
T Consensus       204 Ga~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~  283 (348)
T PLN03154        204 GFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR  283 (348)
T ss_pred             CCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccce
Confidence            99999988642267777777776689999999999999999999999999999997654321100012245667788999


Q ss_pred             eeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106          164 FQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE  228 (228)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~  228 (228)
                      +.|++...+.....+.++++++++++|++++.+..+++|+++++|++.+++++..||+||++.+|
T Consensus       284 i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        284 MQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             EEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            99987665433345678999999999999988877899999999999999999999999998764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.2e-34  Score=224.73  Aligned_cols=206  Identities=27%  Similarity=0.384  Sum_probs=186.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +++| |+++++. ++|.+.|++.|.|++| +..+++||++|+|+|+ ||+|++++|+|+.+|++|+++++++++.+.++ 
T Consensus       133 ~~~i-P~~~d~~-~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-  207 (339)
T COG1064         133 VVKI-PEGLDLA-EAAPLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-  207 (339)
T ss_pred             eEEC-CCCCChh-hhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-
Confidence            5789 9999988 9999999999999999 5599999999999996 89999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|++++++.++. +..+.+++.    +|+++|+++...+..+++.|+++|+++++|....    ......+...++.++
T Consensus       208 ~lGAd~~i~~~~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~  278 (339)
T COG1064         208 KLGADHVINSSDS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKE  278 (339)
T ss_pred             HhCCcEEEEcCCc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcC
Confidence            9999999997754 776676653    9999999997799999999999999999998741    123356788899999


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      +++.|+...+     +..+++++++..+|+++|.+...++++|+++|++.|.+++..|+.||.++
T Consensus       279 ~~i~GS~~g~-----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         279 ISIVGSLVGT-----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             eEEEEEecCC-----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999998     78999999999999999999877899999999999999999999999874

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.1e-33  Score=211.74  Aligned_cols=225  Identities=46%  Similarity=0.788  Sum_probs=202.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +.|++|...++++....|..++.|||.+|.+++++++|++|+|.+|+|++|..+.|+||..|++|+.++.++++..++.+
T Consensus       114 l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~  193 (340)
T COG2130         114 LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTE  193 (340)
T ss_pred             ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHH
Confidence            56787777788877999999999999999999999999999999999999999999999999999999999999999996


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~  160 (228)
                      ++|.+.++|+..+ ++...+.+..+.|+|+.||++|++.++..+..|+..+|+..+|..+..|-+ .+..+.....++.+
T Consensus       194 ~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~k  272 (340)
T COG2130         194 ELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAK  272 (340)
T ss_pred             hcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhh
Confidence            6999999999998 999999999999999999999999999999999999999999998877643 22234445667778


Q ss_pred             hceeeceecc-cchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          161 RIKFQGFLAA-DHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++++.|+... ++.....+..+++..|+++|+|+...+.+-+|+++++||..+.+++..||.|+++.+
T Consensus       273 r~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         273 RLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            9999999984 445555699999999999999998887766999999999999999999999999864

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.5e-31  Score=215.71  Aligned_cols=224  Identities=62%  Similarity=1.044  Sum_probs=182.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +++++|+++++.+++++++++++|||+++...+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++
T Consensus       115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            45673456777546899999999999999888999999999999999999999999999999999999999999999993


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|+++++++.+..++.+.+++.+++++|++||++|+..+..++++++++|+++.+|...+..........+......++
T Consensus       195 ~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~  274 (338)
T cd08295         195 KLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKR  274 (338)
T ss_pred             hcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhcc
Confidence            39999988865422677777777656899999999999999999999999999999865432110000112345666778


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++.++....+.....+.++++++++.+|++++.+...++++++.+|++.+.+++..||+|+++
T Consensus       275 ~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         275 VKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             ceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            8888866655433345678999999999999988777789999999999999998889999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.2e-31  Score=211.96  Aligned_cols=219  Identities=45%  Similarity=0.766  Sum_probs=178.0

Q ss_pred             ccCCCCCCCcchhh-hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            3 RKFDPMGFPLSYQV-GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         3 ~~v~P~~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      .++ |+++++. ++ ++++++++|||+++...+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus       104 ~~~-p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-  180 (325)
T TIGR02825       104 TEW-PDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-  180 (325)
T ss_pred             ccc-cCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            455 8888887 55 6799999999999988899999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~  160 (228)
                      ++|++.++++.+..++.+.++..+++++|++||++|++.+..++++++++|+++.+|...+.... .............+
T Consensus       181 ~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~  260 (325)
T TIGR02825       181 KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQ  260 (325)
T ss_pred             HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhh
Confidence            89999988887532556666666555899999999998889999999999999999865421100 00111224456667


Q ss_pred             hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.++....+ .....+.++++++++.+|++++.+..+++++++++|++.+.+++..||+|++
T Consensus       261 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       261 ELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             cceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            888888765433 2233567899999999999998877788999999999999999988999873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-30  Score=209.80  Aligned_cols=221  Identities=45%  Similarity=0.814  Sum_probs=181.5

Q ss_pred             cccCCCCCCCc--c--hhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106            2 LRKFDPMGFPL--S--YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~--~--~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~   77 (228)
                      ++++ |++++.  .  ..+++++++++|||+++....++++|++|||+|++|++|.+++|+|+.+|++|+++++++++.+
T Consensus       104 ~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~  182 (329)
T cd08294         104 LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA  182 (329)
T ss_pred             eEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4677 888872  1  1245788999999999988899999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCC-CccchHH
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKR-AAPEMLD  156 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~  156 (228)
                      .++ ++|+++++++.+. ++.+.+++.+++++|++||++|++.+..++++++++|+++.+|........... .......
T Consensus       183 ~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  260 (329)
T cd08294         183 WLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQET  260 (329)
T ss_pred             HHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHH
Confidence            999 8999999998876 888888877766899999999999999999999999999999864321110000 1223445


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ...+++++.++....+.....+.++++++++++|++++.+..+++++++++|++.+.+++..||+++++
T Consensus       261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         261 IIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            677888888876544323345678899999999999987777789999999999999999889999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.5e-31  Score=211.92  Aligned_cols=220  Identities=27%  Similarity=0.367  Sum_probs=173.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhc------CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG------KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      ++++ |+++++. ++|+++++++|||.++....      +.++|++|||+||+|++|++++|+|++.++..++++.++++
T Consensus       117 ~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~  194 (347)
T KOG1198|consen  117 LVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK  194 (347)
T ss_pred             ccCC-CCccChh-hhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch
Confidence            5678 9999999 99999999999999999989      89999999999999999999999999999655555558899


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                      .++++ ++|+++++|+++. ++.+.+.+.++++||+||||.|+........++..+|+...++...+.....+. ...+.
T Consensus       195 ~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~-~~~~~  271 (347)
T KOG1198|consen  195 LELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKL-DDLWQ  271 (347)
T ss_pred             HHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEecccccccccc-ccchh
Confidence            99999 9999999999997 999999998844999999999998888888999888765444433321110100 10011


Q ss_pred             HHHhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          156 DVIYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ..........+....++    .....+.++.+.++++.|+++|.+.+.||++++.+||+.+.++...||++++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  272 SANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             hhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            11111111111111111    333468999999999999999999999999999999999999999999999875

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2e-30  Score=197.48  Aligned_cols=209  Identities=24%  Similarity=0.249  Sum_probs=180.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      .+|+ |+++|++  .++|..++.+++++. .++++++|++|||+|| |++|+.+...|+.+|+ +|++++-.+.|++.++
T Consensus       137 c~KL-Pd~vs~e--eGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak  211 (354)
T KOG0024|consen  137 CYKL-PDNVSFE--EGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK  211 (354)
T ss_pred             eeeC-CCCCchh--hcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH
Confidence            6899 9999999  889999999999999 7899999999999996 9999999999999999 9999999999999999


Q ss_pred             HHhCCCceeeccCh---hhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           81 DKLGFDDAFNYKEE---TDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        81 ~~~g~~~~~~~~~~---~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                       ++|++.+.+....   +++.+.+.+..+. .+|+.|||+|. ..++.++.+++.+|.++++|..+.      ..+++..
T Consensus       212 -~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~  284 (354)
T KOG0024|consen  212 -KFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPII  284 (354)
T ss_pred             -HhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChh
Confidence             8999887665542   2455566655554 69999999997 599999999999999999987543      3478889


Q ss_pred             HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEEEecC
Q 027106          156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVVRITE  227 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~~~  227 (228)
                      ....+++++.|+..+.     +..+..+++++.+|++...  ++..|+++++.+||+.+.+++. .-|++|..++
T Consensus       285 ~v~~kE~~~~g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  285 DVALKEVDLRGSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             hhhhheeeeeeeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            9999999999998876     4689999999999998765  5556699999999999998884 4499998754

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.97  E-value=1.6e-30  Score=195.58  Aligned_cols=222  Identities=60%  Similarity=1.017  Sum_probs=203.7

Q ss_pred             CCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 027106            7 PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD   86 (228)
Q Consensus         7 P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~   86 (228)
                      |.++|+++....+..+++|||..+.+++.+++|++|+|-||+|++|..+.|+|+.+||+|+..+.++++...++.++|.+
T Consensus       122 ~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d  201 (343)
T KOG1196|consen  122 PTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD  201 (343)
T ss_pred             CCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCc
Confidence            57889998889999999999999999999999999999999999999999999999999999999999999999889999


Q ss_pred             ceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeec
Q 027106           87 DAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG  166 (228)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (228)
                      ..+|+.++.+..+.+++..+.|+|+.||++|+...+..+..|+..||++.+|..+..|++.+..-.+....+.+++++.|
T Consensus       202 ~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqg  281 (343)
T KOG1196|consen  202 DAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQG  281 (343)
T ss_pred             cceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeee
Confidence            99999986688888998888899999999999999999999999999999999998887665555667888899999999


Q ss_pred             eecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106          167 FLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE  228 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~  228 (228)
                      +...++.+...+.+..+..++++|+|+-.-+..-.|+..++||.-+.+++..||.++.+..|
T Consensus       282 flv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  282 FLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             EEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            98888877778999999999999999877666669999999999999999999999998654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.97  E-value=5.7e-30  Score=208.81  Aligned_cols=211  Identities=19%  Similarity=0.228  Sum_probs=179.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+.++++|||+++....++++|++|||+|+ |++|++++|+|+..|+ +|++++.+++++++++
T Consensus       157 ~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~  233 (371)
T cd08281         157 VVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR  233 (371)
T ss_pred             eEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence            5788 9999998 788888999999999878889999999999985 9999999999999999 6999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|...+.    .....+...++.
T Consensus       234 -~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~  307 (371)
T cd08281         234 -ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVA  307 (371)
T ss_pred             -HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhh
Confidence             9999998888775 78888888776689999999986 6889999999999999999975421    122455667888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +++++.|++...+.  .++.+..+++++.+|++++  .++.+|+++|+++||+.+.+++..+|+|+
T Consensus       308 ~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         308 EERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             cCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            99999998765431  1356788999999999976  35677899999999999999988878764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.97  E-value=3.5e-29  Score=201.95  Aligned_cols=205  Identities=24%  Similarity=0.280  Sum_probs=173.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+++++.|||+++ ...++++|++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++
T Consensus       130 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~  205 (339)
T cd08239         130 LIPL-PDDLSFA-DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK  205 (339)
T ss_pred             eEEC-CCCCCHH-HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 9999998 7888999999999999 5678999999999985 99999999999999997 999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++++. + .+.+.+.+++ ++|++|||+|+. .+..++++++++|+++.+|......      ......++
T Consensus       206 -~~ga~~~i~~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~  276 (339)
T cd08239         206 -ALGADFVINSGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT------IEVSNDLI  276 (339)
T ss_pred             -HhCCCEEEcCCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc------cCcHHHHH
Confidence             9999988888765 5 6677777766 899999999985 5688999999999999999754211      11234567


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.+++...     .+.++++++++.+|++.+  .++.+++++++++||+.+.++. .||+||+|
T Consensus       277 ~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         277 RKQRTLIGSWYFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             hCCCEEEEEecCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            7899999987765     467889999999999875  4667789999999999998875 68999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.97  E-value=9.1e-29  Score=199.99  Aligned_cols=221  Identities=35%  Similarity=0.650  Sum_probs=171.4

Q ss_pred             cccCCCCCCCcc---hhhhccchhHHHHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLS---YQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~---~~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~   75 (228)
                      ++++ |++++..   +.+++++.+++|||+++.+.+++++|  ++|||+|++|++|++++|+|+.+|+ +|+++++++++
T Consensus       114 ~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~  192 (345)
T cd08293         114 LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEK  192 (345)
T ss_pred             eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            4678 8775432   12567788999999999888889877  9999999999999999999999999 89999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccC--CCcCCCccc
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYT--DGKKRAAPE  153 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~  153 (228)
                      .+.+++++|+++++++.+. ++.+.+++.+++++|++||++|+..+..++++++++|+++.+|......  .... ....
T Consensus       193 ~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~  270 (345)
T cd08293         193 CQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYP-PPLP  270 (345)
T ss_pred             HHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCcc-cccc
Confidence            9998845999999988876 8888888877668999999999988899999999999999998643211  0000 0111


Q ss_pred             --hHH-HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          154 --MLD-VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       154 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                        ... ...+++++.++....+....++.++++++++.+|++++....+++++++.+|++.+.+++..||+|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         271 EATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             chhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence              111 123444444443323233345678889999999999987666679999999999999998889999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.97  E-value=1.4e-29  Score=194.50  Aligned_cols=211  Identities=24%  Similarity=0.267  Sum_probs=183.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      +.|| +++.|+. .++.+.|..+|.+-+..+.+++++|++|.|+| .|++|++++|-|+..|+ +|++++.+++++++++
T Consensus       151 ~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~  227 (366)
T COG1062         151 LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK  227 (366)
T ss_pred             eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence            5789 8888998 88899999999999999999999999999999 69999999999999999 9999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       +||+++++|.++..++.+.+.++|++|+|++|||+|. ..++.++.+..++|+.+.+|.....    ...+.++..+..
T Consensus       228 -~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~lv~  302 (366)
T COG1062         228 -KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQLVT  302 (366)
T ss_pred             -hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHHeec
Confidence             9999999999875358999999999899999999998 6999999999999999999986642    233455666665


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      . .+++|+++...  ..+..+..++++..+|++...  ++..++|+|++|||+.+.+++.. |-||+
T Consensus       303 g-r~~~Gs~~G~~--~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         303 G-RVWKGSAFGGA--RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             c-ceEEEEeecCC--ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            5 88999988754  115779999999999999875  55567999999999999999976 55554

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-29  Score=201.38  Aligned_cols=203  Identities=19%  Similarity=0.224  Sum_probs=167.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++.  ++++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       137 ~~~~-P~~l~~~--~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~  211 (343)
T PRK09880        137 CIPY-PEKADEK--VMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR  211 (343)
T ss_pred             eEEC-CCCCCHH--HHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH
Confidence            5788 9998877  56677888999999944 56678999999995 9999999999999999 7999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++++++. ++.+.. +. .+++|++|||+|+ ..+..++++++++|+++.+|....      ...+++..++.
T Consensus       212 -~lGa~~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~  281 (343)
T PRK09880        212 -EMGADKLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIV  281 (343)
T ss_pred             -HcCCcEEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHh
Confidence             8999999888765 544322 21 2369999999997 588999999999999999996432      22456677788


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++++.++....      +.++++++++++|++++  .++.+++++|+++||+.+.++...||++|.+
T Consensus       282 k~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        282 KEISLKGSFRFT------EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             CCcEEEEEeecc------ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            999998876532      56889999999999986  4567789999999999999888789999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.3e-29  Score=190.47  Aligned_cols=209  Identities=21%  Similarity=0.283  Sum_probs=183.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +++| |+++++. .||++.|++.|.|..| ...++.||++|-|.|+ ||+|.+++|+|+++|.+|++++++..+.+.+.+
T Consensus       148 a~kI-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~  223 (360)
T KOG0023|consen  148 AIKI-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIK  223 (360)
T ss_pred             EEEC-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHH
Confidence            5789 9999999 9999999999999999 6789999999999996 779999999999999999999988755555554


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      .+|++.+++..+..+..+.+...+++++|-+.+. ....+..++.+++++|++|++|.+..      ....+...+..+.
T Consensus       224 ~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~  296 (360)
T KOG0023|consen  224 SLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGR  296 (360)
T ss_pred             hcCcceeEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhccc
Confidence            8999998888744499999998888788888776 44588889999999999999998763      3467778888999


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+.|+..++     +...++++++..++.+++.+... +++++++||++++++...+|.|+++..
T Consensus       297 ~~I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE~v-~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  297 KSIKGSIVGS-----RKETQEALDFVARGLIKSPIELV-KLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             EEEEeecccc-----HHHHHHHHHHHHcCCCcCceEEE-ehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            9999999998     78899999999999999887764 999999999999999999999998764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=1.4e-29  Score=217.48  Aligned_cols=218  Identities=24%  Similarity=0.381  Sum_probs=188.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +-.| |.+..++ +|++.|+.|.|+||+|..++..++|++||||+|+||+|++||.+|.+.|++|+.++.+.++.+++.+
T Consensus      1518 lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~ 1595 (2376)
T KOG1202|consen 1518 LWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLK 1595 (2376)
T ss_pred             hhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHH
Confidence            3457 9999999 9999999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             HhCC---CceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           82 KLGF---DDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        82 ~~g~---~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      .|..   .++-|.++. +|..-+.+.|.| |+|+|+|....+.++.+++||+.+|||..+|--.-.     .........
T Consensus      1596 rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLS-----qNspLGMav 1669 (2376)
T KOG1202|consen 1596 RFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLS-----QNSPLGMAV 1669 (2376)
T ss_pred             hchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecc-----cCCcchhhh
Confidence            5553   566777776 999999999988 999999999999999999999999999999854311     123445677


Q ss_pred             Hhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          158 IYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+|.+|+|..+..+    .++.++.+.-+.+-+++|.++|.+..+|+-.++++||+.|.+++..||+|+++..
T Consensus      1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred             hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence            889999999988766    3344455555555666788999999999999999999999999999999999854

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.97  E-value=1.3e-28  Score=197.53  Aligned_cols=212  Identities=23%  Similarity=0.280  Sum_probs=175.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVS-AASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++++++.++|||.++ ...+. ++++++|+ +++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus       110 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~  185 (324)
T cd08291         110 CLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK  185 (324)
T ss_pred             eEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5688 9999988 7888888899998655 55555 56666666 78899999999999999999999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++++... ++.+.+++.+++ ++|++||++|+......+++++++|+++.+|...+.+    ....+....+.
T Consensus       186 -~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~  259 (324)
T cd08291         186 -KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIF  259 (324)
T ss_pred             -HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhh
Confidence             8999999988776 888888888876 8999999999988888999999999999999754321    11244556778


Q ss_pred             hhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +++++.++....+ .....+.++.++++++ +.+++.+..+|+++|+.+||+.+.++...||++|.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         260 KNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             cCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            8999998887654 2223567888899988 99999888999999999999999999888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.96  E-value=1.7e-28  Score=199.25  Aligned_cols=211  Identities=20%  Similarity=0.256  Sum_probs=176.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+++.++++|+++...+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++
T Consensus       142 ~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~  218 (358)
T TIGR03451       142 CTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR  218 (358)
T ss_pred             eEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5678 8898887 788888999999999878889999999999985 9999999999999999 5999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|...+.    .....+...++
T Consensus       219 -~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~  292 (358)
T TIGR03451       219 -EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVF  292 (358)
T ss_pred             -HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHh
Confidence             9999988888765 778888888876 89999999997 5889999999999999999975421    11234556777


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .+++++.+++.....  .++.++++++++.+|++++  .++.+||++|+.+||+.+.+++.. |+++.
T Consensus       293 ~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       293 GRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             hcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            889998887643211  1466888999999999976  367788999999999999888765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=99.96  E-value=5e-28  Score=197.62  Aligned_cols=212  Identities=20%  Similarity=0.241  Sum_probs=175.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+.+.++++|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++++.+.++
T Consensus       159 ~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~  235 (378)
T PLN02827        159 AVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK  235 (378)
T ss_pred             eEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            5788 9999988 788888899999998877789999999999985 9999999999999999 5788888999999998


Q ss_pred             HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccC-cEEEEEeeecccCCCcCCCccch-HH
Q 027106           81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEM-LD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~  156 (228)
                       ++|++.++++.+. +++.+.+++.+++++|++||++|.. .+..+++.++++ |+++.+|.....      ..... ..
T Consensus       236 -~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~~~~~~  308 (378)
T PLN02827        236 -TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEVSAHYG  308 (378)
T ss_pred             -HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccccccHH
Confidence             9999888887642 2667777777766899999999974 789999999998 999999975421      12222 35


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ++.+++++.|+....+.  ....++.+++++.+|++++  .++.+|+|+++.+|++.+.+++. .|+||.+.
T Consensus       309 ~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        309 LFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             HHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            67789999998765431  1346788999999999998  57778899999999999998876 59999874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.96  E-value=4.7e-28  Score=196.60  Aligned_cols=204  Identities=18%  Similarity=0.224  Sum_probs=167.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT-LLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-~~~   80 (228)
                      ++++ |+++++. +++++.+.+.|+|+++.....+++|++|||.|+ |++|++++|+|+.+|++|++++.++++.. .++
T Consensus       149 ~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~  225 (360)
T PLN02586        149 VLRF-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN  225 (360)
T ss_pred             eeeC-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH
Confidence            5788 9999998 888999999999999976677889999999885 99999999999999999988877666544 445


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++++++..+.    +.+++.++ ++|++||++|. ..++.++++++++|+++.+|...+      ....+...++.
T Consensus       226 -~~Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~  293 (360)
T PLN02586        226 -RLGADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVL  293 (360)
T ss_pred             -hCCCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHh
Confidence             8999888876543    23444443 69999999997 478999999999999999986432      12445566677


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ++..+.++....     ...++++++++.+|++++.+ .+|+|+|+++||+.+.+++..||+|+++.
T Consensus       294 ~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        294 GRKLVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             CCeEEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            788887777655     35688999999999999766 46899999999999999988899999873

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.96  E-value=1.3e-27  Score=193.44  Aligned_cols=208  Identities=22%  Similarity=0.267  Sum_probs=171.6

Q ss_pred             cccCCCC------CCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106            2 LRKFDPM------GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~------~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      ++++ |+      ++++. +++++++++.|+|+++. ..++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++
T Consensus       127 ~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~  202 (349)
T TIGR03201       127 LCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEK  202 (349)
T ss_pred             eEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            3567 76      77777 78888899999999995 588999999999998 999999999999999999999999999


Q ss_pred             HHHHHHHhCCCceeeccCh--hhHHHHHHHHCCC-Ccc----EEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCc
Q 027106           76 VTLLKDKLGFDDAFNYKEE--TDLKAALKRYFPD-GID----IYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGK  147 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~-~~d----~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  147 (228)
                      ++.++ ++|+++++++.+.  +++.+.+++.+++ |+|    ++|||+|+ ..++.++++++++|+++.+|...+.    
T Consensus       203 ~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----  277 (349)
T TIGR03201       203 LEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK----  277 (349)
T ss_pred             HHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC----
Confidence            99998 8999888876543  2566777778776 786    89999997 4778889999999999999976421    


Q ss_pred             CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc-cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          148 KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL-EDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                        ..++...++.++.++.+.+...     .+.++.+++++++|++++. ....++|+++++||+.+.++...+|+++++
T Consensus       278 --~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       278 --TEYRLSNLMAFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             --cccCHHHHhhcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence              2344556667778888876544     4678899999999999763 234679999999999999998889999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.96  E-value=8.8e-28  Score=192.82  Aligned_cols=196  Identities=16%  Similarity=0.138  Sum_probs=164.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++++++.+.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ 
T Consensus       132 ~~~l-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-  206 (329)
T TIGR02822       132 AYRL-PTGYDDV-ELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-  206 (329)
T ss_pred             EEEC-CCCCCHH-HhHHHhccchHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-
Confidence            5788 9999988 7888999999999999 4689999999999996 99999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++++++..+. .         .+++|+++++.+. ..+..++++++++|+++.+|...+.     ...++...++.+
T Consensus       207 ~~Ga~~vi~~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~  271 (329)
T TIGR02822       207 ALGAASAGGAYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFY  271 (329)
T ss_pred             HhCCceecccccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhC
Confidence            9999988875421 1         1368988887764 6899999999999999999974321     123455666778


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      ++++.++....     ++.+.++++++++|++++ ++.+|+|+|+++||+.+.+++..||+||
T Consensus       272 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       272 ERQIRSVTSNT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             CcEEEEeecCC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            88888876554     456788899999999975 4577899999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=1.2e-27  Score=194.96  Aligned_cols=203  Identities=19%  Similarity=0.225  Sum_probs=168.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~   79 (228)
                      ++++ |+++++. +++++++.+.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.+
T Consensus       143 ~~~l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a  219 (375)
T PLN02178        143 VLSI-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI  219 (375)
T ss_pred             eEEC-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH
Confidence            5788 9999998 888999999999999855433 368999999985 999999999999999999998876554 6777


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      + ++|+++++++.+.    +.+.+.++ ++|++|||+|.+ .+..++++++++|+++.+|...+      ...++...++
T Consensus       220 ~-~lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~  287 (375)
T PLN02178        220 D-RLGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLV  287 (375)
T ss_pred             H-hCCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHH
Confidence            7 8999888876542    23444443 699999999985 78999999999999999986532      1245567777


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.|+....     .+.+.++++++.+|++++.+ .+|||+|+++||+.+.+++..||+|+++
T Consensus       288 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        288 LGRKMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             hCCeEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            8999999887765     46788999999999999876 4689999999999999998889999987

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=193.68  Aligned_cols=213  Identities=19%  Similarity=0.251  Sum_probs=168.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ .+++++++++ ...++++|++|||+| +|++|++++|+|+.+|++ |+++++++++.+.++
T Consensus       128 ~~~l-P~~~s~~-~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~  202 (347)
T PRK10309        128 LFAL-PTDMPIE-DGAFI-EPITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK  202 (347)
T ss_pred             eEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            5678 9999887 55544 3566788886 668899999999998 599999999999999996 788988999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-Ccc-EEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GID-IYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d-~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++++++. + ...+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. .  .........+
T Consensus       203 -~~Ga~~~i~~~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~  276 (347)
T PRK10309        203 -SLGAMQTFNSREM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKI  276 (347)
T ss_pred             -HcCCceEecCccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHH
Confidence             9999888887764 4 4556666665 898 99999997 5889999999999999999975431 1  0111123356


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.+++++.|++........++.++++++++++|++.  +.++.+++|+|+++|++.+.++...||+|+++
T Consensus       277 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        277 LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            778999999776422111246688899999999985  55777889999999999999988889999976

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=2.8e-27  Score=192.02  Aligned_cols=206  Identities=20%  Similarity=0.214  Sum_probs=171.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++++++.+.|||+++......++|++|+|+| +|++|++++|+|+.+|++|+++++++++.+.+.+
T Consensus       146 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~  222 (357)
T PLN02514        146 VVKI-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALE  222 (357)
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            5788 9999998 88899999999999997767778999999997 5999999999999999999988888877766654


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++..+.    ..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|...+      ...++...++.+
T Consensus       223 ~~Ga~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~  291 (357)
T PLN02514        223 HLGADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLG  291 (357)
T ss_pred             hcCCcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhC
Confidence            7999877665432    23444333 69999999996 588899999999999999997642      124556667788


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++++.|++...     ...++++++++.+|++++.+ .+|+++|+.+||+.+.+++..||+++.++.
T Consensus       292 ~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        292 RKVITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             CcEEEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            99999988766     45788999999999998766 468999999999999999988999999864

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.96  E-value=2.9e-27  Score=189.53  Aligned_cols=213  Identities=20%  Similarity=0.246  Sum_probs=180.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++.+.+||+++ ...++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.++ 
T Consensus       106 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-  181 (324)
T cd08292         106 LVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-  181 (324)
T ss_pred             eEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-
Confidence            5688 9999988 7888888899999998 5589999999999999999999999999999999999998999889998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++++++..+. ++.+.+.+.+++ ++|++||++|+.....++++++++|+++.+|...+.     .........+.+
T Consensus       182 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  255 (324)
T cd08292         182 ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGE-----PMQISSGDLIFK  255 (324)
T ss_pred             hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCC-----CCcCCHHHHhhC
Confidence            7899888888765 788888888887 999999999998889999999999999999865321     123344556678


Q ss_pred             hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.++....+     +....+.++.+++++.+|.+.+.+...++++++.+|++.+.++...+|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         256 QATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             CCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            999998876543     2334568899999999999987667778999999999999888778899874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.96  E-value=3.7e-27  Score=192.02  Aligned_cols=212  Identities=20%  Similarity=0.266  Sum_probs=168.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.++++++.++
T Consensus       151 ~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~  227 (368)
T TIGR02818       151 LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK  227 (368)
T ss_pred             eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5788 9999998 888899999999999978889999999999985 9999999999999999 8999999999999998


Q ss_pred             HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|++++++..+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|.....    .........+
T Consensus       228 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~  302 (368)
T TIGR02818       228 -KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQL  302 (368)
T ss_pred             -HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHH
Confidence             9999888887641 256677777776689999999996 5888999999886 999999975421    0112223333


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      . ++..+.++.....  ..+..+.++++++.+|++++  .++.+|+|+|+++||+.+.+++. .|++|++
T Consensus       303 ~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       303 V-TGRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             h-ccceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            3 2344566544321  11356888999999999864  46778899999999999988765 5999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=99.96  E-value=2.5e-27  Score=193.88  Aligned_cols=211  Identities=18%  Similarity=0.250  Sum_probs=171.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.+.+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       164 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~  240 (381)
T PLN02740        164 VVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK  240 (381)
T ss_pred             eEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH
Confidence            5688 9999988 788889999999999878899999999999995 9999999999999999 6999999999999998


Q ss_pred             HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|++.+++..+. +++.+.+++.+++++|++||++|. ..+..++++++++ |+++.+|.....    ....+....+
T Consensus       241 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~~  315 (381)
T PLN02740        241 -EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPMEL  315 (381)
T ss_pred             -HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHHH
Confidence             9999888887653 147777877776689999999997 6889999999996 999999975421    0112222223


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                       .+++++.|+....+..  ...++.+++++.+|++++  .++.+|+|+|+++|++.+.+++. .|++|+
T Consensus       316 -~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~  380 (381)
T PLN02740        316 -FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH  380 (381)
T ss_pred             -hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence             3678888877654321  246788999999999865  46678899999999999988875 499886

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.96  E-value=5.8e-27  Score=190.95  Aligned_cols=211  Identities=23%  Similarity=0.303  Sum_probs=168.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+++++.|||+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       152 ~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~  228 (368)
T cd08300         152 VAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK  228 (368)
T ss_pred             eEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5788 9999998 788889999999999877889999999999985 9999999999999999 7999999999999998


Q ss_pred             HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++++.+.+ ++.+.+.+.+++++|+|||++|+ ..+..++++++++ |+++.+|...+.    .........+
T Consensus       229 -~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~  303 (368)
T cd08300         229 -KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQL  303 (368)
T ss_pred             -HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHH
Confidence             99999888876531 47777887776689999999997 5889999999986 999999975321    0112222222


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      . ++..+.++....+.  .++.+.++++++.+|++++.  ++.+++|+|+++||+.+.+++. .|++|+
T Consensus       304 ~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         304 V-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             h-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            2 33455555543321  14667889999999999864  6678899999999999987765 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2.4e-27  Score=179.70  Aligned_cols=211  Identities=21%  Similarity=0.269  Sum_probs=181.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      +.|| ++..|++ .++.|.|...|+|.+..+.+++++|+++.|+| .|++|+++++-||..|+ +||.++-++++++.++
T Consensus       158 v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak  234 (375)
T KOG0022|consen  158 VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK  234 (375)
T ss_pred             eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH
Confidence            5688 7788999 89999999999999999999999999999999 69999999999999999 9999999999999999


Q ss_pred             HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++|+.+.. .+.+.+++.|++|+|+-|||+|. +.+.+++.+...| |+-+.+|.....    ...+..+..+
T Consensus       235 -~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~i~~~p~~l  309 (375)
T KOG0022|consen  235 -EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QEISTRPFQL  309 (375)
T ss_pred             -hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----cccccchhhh
Confidence             99999999987533 37888999999999999999998 6888999999887 999999987642    2334555555


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      + ++.++.|+..+.+..  ++.+..+++...++++...  ++.++||+++.+||+.|.+++.. |.||.
T Consensus       310 ~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  310 V-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             c-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            5 477888888777632  6788999999999987765  56666999999999999999976 77765

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.95  E-value=1.1e-26  Score=189.42  Aligned_cols=210  Identities=19%  Similarity=0.242  Sum_probs=170.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+++.++|||+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       153 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~  229 (369)
T cd08301         153 VAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK  229 (369)
T ss_pred             EEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5678 9999988 788888999999999878899999999999985 9999999999999999 8999999999999998


Q ss_pred             HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|++.++++.+. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.....    .....+...+
T Consensus       230 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~  304 (369)
T cd08301         230 -KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNL  304 (369)
T ss_pred             -HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHH
Confidence             9999888877642 156677777776689999999987 4788899999996 999999976531    1122333334


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      + +++++.|+....+.  .+..++.+++++.+|+++..  +..++||+|+++||+.+.+++.. |++|
T Consensus       305 ~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         305 L-NGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             h-cCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            4 68899888765431  13568889999999988653  56778999999999999998864 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.95  E-value=1.6e-26  Score=187.29  Aligned_cols=204  Identities=22%  Similarity=0.278  Sum_probs=173.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++. ..++.|||+++ ...++++|++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.++++
T Consensus       140 ~~~l-P~~~~~~-~aa~-~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~  214 (351)
T cd08233         140 VHKL-PDNVPLE-EAAL-VEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE  214 (351)
T ss_pred             eEEC-cCCCCHH-Hhhh-ccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5678 9998887 5544 47888999999 7789999999999985 9999999999999999 8999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++.+. ++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.+|....      ...++...++
T Consensus       215 -~~ga~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~  286 (351)
T cd08233         215 -ELGATIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLV  286 (351)
T ss_pred             -HhCCCEEECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHH
Confidence             8999998888876 788888888776 79999999985 688999999999999999997542      2245667778


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcH-HHHHHHhHcCCC-cceEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESI-PSAFTGLFQGGN-IGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~-~~A~~~~~~~~~-~gkvvl  223 (228)
                      .+++++.++....     ++.++++++++++|++++  .+..+++++|+ ++|++.+.+++. .+|+||
T Consensus       287 ~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         287 LKEKTLTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             hhCcEEEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            8999999887654     467899999999999964  45677899996 799999999886 489987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.95  E-value=2.1e-26  Score=187.53  Aligned_cols=210  Identities=20%  Similarity=0.248  Sum_probs=169.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.++++++|||+++...+++++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       150 ~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~  226 (365)
T cd08277         150 VAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK  226 (365)
T ss_pred             eEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5788 9999988 88888999999999987888999999999998 59999999999999999 7999999999999998


Q ss_pred             HHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|++++++..+. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...+.     ....+...+
T Consensus       227 -~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~  300 (365)
T cd08277         227 -EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQL  300 (365)
T ss_pred             -HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHH
Confidence             9999888877642 145667777766689999999996 6888999999885 999999975421     112334444


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +. ++++.+++...+.  .+..+.++++++.++.++  +.++.+|+|+|+++||+.+.+++ ..|+++.
T Consensus       301 ~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         301 IL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             hh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence            43 7888887765431  134678899999998765  45677889999999999998887 4588863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.95  E-value=4.3e-26  Score=182.72  Aligned_cols=214  Identities=26%  Similarity=0.372  Sum_probs=179.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++++++.++||| ++....+++++++|+|+|++|++|.+++++|+.+|++|+++++++++.+.++ 
T Consensus       109 ~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-  184 (324)
T cd08244         109 LHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-  184 (324)
T ss_pred             eEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence            5678 9999888 7888999999995 4557789999999999999999999999999999999999999999999997 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++..+. ++...+.+.+++ ++|+++|++|+.....++++++++|+++.+|.....     ....+....+.+
T Consensus       185 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  258 (324)
T cd08244         185 ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRR  258 (324)
T ss_pred             HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhC
Confidence            8999888887765 777777777776 899999999998789999999999999999875432     113344555788


Q ss_pred             hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.++..... +....+.+.++++++.++.+.+.+...++++++.+|++.+.++...||+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         259 GVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             CcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            888888776543 33445788889999999999877777889999999999999988889999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.95  E-value=2.6e-26  Score=188.71  Aligned_cols=210  Identities=21%  Similarity=0.273  Sum_probs=174.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. +++.+++++.|||+++...  +++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.+
T Consensus       157 l~~i-P~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         157 LMPK-PKHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             eEEC-CCCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            5788 9999988 7888999999999998655  7899999999999889999999999999999999999999999999


Q ss_pred             HHHhCCCceeeccCh---------------------hhHHHHHHHHCCC--CccEEEcCcchhHHHHHHHccccCcEEEE
Q 027106           80 KDKLGFDDAFNYKEE---------------------TDLKAALKRYFPD--GIDIYFDNVGAEMQEAAIANMNTYGRVAV  136 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~---------------------~~~~~~~~~~~~~--~~d~vld~~g~~~~~~~~~~l~~~G~~v~  136 (228)
                      + ++|++.+++.++.                     ..+.+.+.+++++  ++|++||++|+..+..++++++++|+++.
T Consensus       235 ~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~  313 (393)
T cd08246         235 R-ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVI  313 (393)
T ss_pred             H-HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEE
Confidence            8 8999888876331                     0245667777765  79999999998888999999999999999


Q ss_pred             EeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcC-
Q 027106          137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQG-  215 (228)
Q Consensus       137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~-  215 (228)
                      +|.....     ....+...+..++.++.+.+...     .+.+..++++++++.+.+.+..+++++++++|++.+.++ 
T Consensus       314 ~g~~~~~-----~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~  383 (393)
T cd08246         314 CAGTTGY-----NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQ  383 (393)
T ss_pred             EcccCCC-----CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCc
Confidence            9865432     12344556667788888876655     356788999999999987777788999999999999998 


Q ss_pred             CCcceEEEE
Q 027106          216 GNIGKKVVR  224 (228)
Q Consensus       216 ~~~gkvvl~  224 (228)
                      +..||+++-
T Consensus       384 ~~~gkvvv~  392 (393)
T cd08246         384 HHVGNMAVL  392 (393)
T ss_pred             cccceEEEe
Confidence            788898874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.95  E-value=1.1e-26  Score=174.07  Aligned_cols=216  Identities=20%  Similarity=0.261  Sum_probs=177.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +++| ++++++. +||++..+.+|||+.|.+.-++++||+|+-.||++++|.+.+|+|+++|.+-+-+.|+....+.+++
T Consensus       126 Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~  203 (354)
T KOG0025|consen  126 LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKK  203 (354)
T ss_pred             eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHH
Confidence            5788 8889988 9999999999999999999999999999999999999999999999999988888887766655543


Q ss_pred             ---HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           82 ---KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        82 ---~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                         .+|+++++..++. .-.+........ ++...|||+|+.....+.+.|.+||.++.+|..+.     .+...+...+
T Consensus       204 ~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~l  277 (354)
T KOG0025|consen  204 QLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLL  277 (354)
T ss_pred             HHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchh
Confidence               5899998765432 111122121223 78999999999988899999999999999999874     4567788899


Q ss_pred             Hhhhceeeceecccc------hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCC-CcceEEEEe
Q 027106          158 IYKRIKFQGFLAADH------LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGG-NIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~  225 (228)
                      +.+++.++|+++..|      ++...+.+.++.+|+++|+++.+.....+|++...|++...... ..||-++.+
T Consensus       278 IFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  278 IFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             eeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            999999999999887      44556889999999999999988877779999999998666554 446666654

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.95  E-value=6.5e-26  Score=187.13  Aligned_cols=212  Identities=19%  Similarity=0.162  Sum_probs=164.1

Q ss_pred             cccCCCCCCCcchhhhccchhHH---HHHHHH--------HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEE
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGL---TAYAGL--------FEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC---YVV   67 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~---ta~~~l--------~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~   67 (228)
                      ++++ |+++++. +++ +..++.   +++.++        ....++++|++|+|+|++|++|++++|+|+.+|+   +|+
T Consensus       131 ~~~l-P~~l~~~-~aa-l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi  207 (410)
T cd08238         131 CLLI-YEGDGYA-EAS-LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV  207 (410)
T ss_pred             eEEC-CCCCCHH-HHh-hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence            5788 9998887 444 332322   233332        2457889999999999889999999999999864   899


Q ss_pred             EEeCCHHHHHHHHHHh--------CCC-ceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106           68 GSAGSKEKVTLLKDKL--------GFD-DAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus        68 ~~~~~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~  136 (228)
                      +++.++++++.++ ++        |++ .++++.+.+++.+.+++.+++ ++|+++|++|. ..+..++++++++|+++.
T Consensus       208 ~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~  286 (410)
T cd08238         208 VTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNF  286 (410)
T ss_pred             EEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEE
Confidence            9999999999998 76        665 456665422677788888877 89999999985 788999999999998887


Q ss_pred             EeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHc
Q 027106          137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQ  214 (228)
Q Consensus       137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~  214 (228)
                      ++.....+   ...+++...++.+++++.|+....     +..++++++++.+|++++  .++.+++|+++.+|++.+. 
T Consensus       287 ~~g~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-  357 (410)
T cd08238         287 FAGPVDKN---FSAPLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-  357 (410)
T ss_pred             EEccCCCC---ccccccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-
Confidence            75432111   112456677888999999987655     467889999999999988  4677789999999999998 


Q ss_pred             CCCcceEEEEec
Q 027106          215 GGNIGKKVVRIT  226 (228)
Q Consensus       215 ~~~~gkvvl~~~  226 (228)
                      ++..||+||.++
T Consensus       358 ~~~~gKvvl~~~  369 (410)
T cd08238         358 GIPGGKKLIYTQ  369 (410)
T ss_pred             ccCCceEEEECC
Confidence            667799999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.95  E-value=5e-26  Score=185.13  Aligned_cols=210  Identities=19%  Similarity=0.226  Sum_probs=167.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.+++++.|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       143 ~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~  219 (361)
T cd08231         143 IVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR  219 (361)
T ss_pred             eEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5678 8887777 67777799999999997777777999999998 59999999999999999 9999999999999998


Q ss_pred             HHhCCCceeeccChh--hHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHH
Q 027106           81 DKLGFDDAFNYKEET--DLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~--~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  156 (228)
                       ++|++.+++.++..  +....+++.+++ ++|++|||.|+ ..+..++++++++|+++.+|.....    .....+...
T Consensus       220 -~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~  294 (361)
T cd08231         220 -EFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPER  294 (361)
T ss_pred             -HcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHH
Confidence             99998888766431  223567777776 89999999986 6788999999999999999965421    112344456


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcC--C--CccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--A--IYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.+++++.+++...     .+.++++++++.++  .  +.+.+.++++++++++||+.+.++.. +|+||++
T Consensus       295 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         295 IVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             HhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            788899998887654     34566777777766  3  44456777899999999999988774 7999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.95  E-value=1.1e-25  Score=180.36  Aligned_cols=214  Identities=25%  Similarity=0.280  Sum_probs=180.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++.+.+||+++....++.+|++|||+|++|++|++++++|+.+|++|+++++++++.+.++ 
T Consensus       104 ~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  180 (323)
T cd05282         104 LIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-  180 (323)
T ss_pred             eEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-
Confidence            4678 8888887 788888999999999988888999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++..+. ++...+.+.+++ ++|+++||+|+......+++++++|+++.+|.....     ....+...+..+
T Consensus       181 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  254 (323)
T cd05282         181 ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFK  254 (323)
T ss_pred             hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhc
Confidence            8999888888765 777788888776 899999999998778899999999999999865431     123344444458


Q ss_pred             hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.++....+     +....+.+.++++++.++++.+.....++++++.+||+.+.++...+|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         255 DITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             CceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            888888776543     3345578899999999999987767778999999999999988888898863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.95  E-value=9.3e-26  Score=181.63  Aligned_cols=203  Identities=22%  Similarity=0.319  Sum_probs=172.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+.|||+++.. .++++|++|||+| +|++|++++++|+.+|++|+++++++++.+.++ 
T Consensus       130 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-  204 (333)
T cd08296         130 LARI-PDDLDAA-EAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-  204 (333)
T ss_pred             eEeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-
Confidence            5688 9999988 788899999999999955 5899999999999 799999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|+++++++.+. ++...+++.  +++|+++|+.| +..+..++++++++|+++.+|....      ..+.+...++.+
T Consensus       205 ~~g~~~~i~~~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~  275 (333)
T cd08296         205 KLGAHHYIDTSKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMG  275 (333)
T ss_pred             HcCCcEEecCCCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhc
Confidence            9999888888765 666666654  36999999986 5788999999999999999997542      224555667789


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.++....     ...+..+++++.++++++.+ ..++++++.+||+.+.+++..||+|++
T Consensus       276 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         276 RKSIHGWPSGT-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             ccEEEEeCcCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            99999987554     35677888899999988764 468999999999999999989999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=9.8e-26  Score=182.62  Aligned_cols=206  Identities=21%  Similarity=0.234  Sum_probs=170.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++++++++.|||+++ ...++++|++|||+|++|++|++++++|+.+|++|+++++++ +.+.++ 
T Consensus       144 ~~~i-p~~~~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-  218 (350)
T cd08274         144 AYPV-NSPLSDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-  218 (350)
T ss_pred             ceeC-CCCCCHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-
Confidence            5688 9999888 7889999999999998 778999999999999989999999999999999999888665 778887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+.+.... ...+  ...+.+ ++|++||++|++.+..++++++++|+++.+|...+.     ....+...++.+
T Consensus       219 ~~g~~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~  290 (350)
T cd08274         219 ALGADTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLYLK  290 (350)
T ss_pred             hcCCeEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-----cccCCHHHhhhc
Confidence            8998765554433 3333  444454 899999999999999999999999999999864321     123455666788


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.++....     .+.+.++++++.++++++.+...++++++.+|++.+.++...+|+++++
T Consensus       291 ~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         291 DLTLFGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             ceEEEEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            88888877654     5778899999999999887777789999999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.95  E-value=2.1e-25  Score=179.19  Aligned_cols=219  Identities=49%  Similarity=0.773  Sum_probs=176.4

Q ss_pred             cccCCCCCCC--cchhhhc-cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFP--LSYQVGI-LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~--~~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |++++  +. ++++ +++++.|||+++....++.+|++|||+|++|++|++++|+|+..|++|+++++++++.+.
T Consensus       108 ~~~l-P~~~~~~~~-~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~  185 (329)
T cd05288         108 LRKL-DPSLGLPLS-AYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW  185 (329)
T ss_pred             cEEC-CcccCCCHH-HHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            4678 88885  33 3444 899999999999887889999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      +++.+|++++++..+. ++...+.+.+++++|+++||+|+..+..++++++++|+++.+|..............+....+
T Consensus       186 ~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  264 (329)
T cd05288         186 LVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNII  264 (329)
T ss_pred             HHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHh
Confidence            9833999888888765 777777777655899999999999999999999999999999875432110000012345566


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      .+++++.++..........+.+.++++++.+|.+++.....++++++.++++.+.+++..+|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         265 TKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             hCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            78888888766543333456788999999999998876677899999999999988887788874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.95  E-value=2e-25  Score=183.71  Aligned_cols=212  Identities=20%  Similarity=0.254  Sum_probs=175.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. +++.+.+.+.|||+++..  ..++.+|++|+|+|++|++|++++|+|+.+|++++++++++++.+.+
T Consensus       153 ~~~v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       153 LMPK-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             eEEC-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5678 9999988 788889999999999865  47889999999999999999999999999999999888899999999


Q ss_pred             HHHhCCCceeeccCh---------------------hhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEE
Q 027106           80 KDKLGFDDAFNYKEE---------------------TDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~---------------------~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~  137 (228)
                      + ++|++.++|+++.                     ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+
T Consensus       231 ~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~  309 (398)
T TIGR01751       231 R-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVIC  309 (398)
T ss_pred             H-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEE
Confidence            9 8999888876432                     0245566777765 899999999988889999999999999999


Q ss_pred             eeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCC
Q 027106          138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGN  217 (228)
Q Consensus       138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~  217 (228)
                      |.....+     ...+...++.++..+.+.....     .+.+.+++++++++++.+.+..++++++++++|+.+.++..
T Consensus       310 g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~  379 (398)
T TIGR01751       310 GGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHH  379 (398)
T ss_pred             ccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCC
Confidence            9765321     1334455566777777766554     24467899999999998877778899999999999999998


Q ss_pred             cceEEEEec
Q 027106          218 IGKKVVRIT  226 (228)
Q Consensus       218 ~gkvvl~~~  226 (228)
                      .||+|++++
T Consensus       380 ~gkvvv~~~  388 (398)
T TIGR01751       380 QGNVAVLVL  388 (398)
T ss_pred             CceEEEEeC
Confidence            899999875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=1.2e-25  Score=181.30  Aligned_cols=204  Identities=25%  Similarity=0.282  Sum_probs=168.0

Q ss_pred             CCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-hC
Q 027106            7 PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDK-LG   84 (228)
Q Consensus         7 P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~-~g   84 (228)
                      |++++.  ++++|..++.|++++........++++|+|+|+ |++|++++++++..|+ +|++++.+++|+++++ + .|
T Consensus       139 pd~~~~--~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~-~~~g  214 (350)
T COG1063         139 PDGIDE--EAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAK-EAGG  214 (350)
T ss_pred             CCCCCh--hhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HhCC
Confidence            777633  599999999999888655666667779999995 9999999999999998 8999999999999999 6 66


Q ss_pred             CCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhc
Q 027106           85 FDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRI  162 (228)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  162 (228)
                      ++.+.+..+. +....+.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|...+..     ...+...++.+++
T Consensus       215 ~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel  288 (350)
T COG1063         215 ADVVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKEL  288 (350)
T ss_pred             CeEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhccc
Confidence            6666665554 667778888888 99999999997 47899999999999999999876421     1466788999999


Q ss_pred             eeeceec-ccchhHHHHHHHHHHHHHHcCCCccccc--eecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106          163 KFQGFLA-ADHLNLYQDFISTTCNHLRSGAIYPLED--ISDGVESIPSAFTGLFQGGN-IGKKVVRI  225 (228)
Q Consensus       163 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~~~~~A~~~~~~~~~-~gkvvl~~  225 (228)
                      ++.|+.. ..     +..++.+++++.+|++.+...  ..++++++++|++.+.+.+. ..|+++.+
T Consensus       289 ~l~gs~~~~~-----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         289 TLRGSLRPSG-----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             EEEeccCCCC-----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999854 33     367899999999999998643  44589999999999988654 56988864

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.94  E-value=4e-25  Score=177.80  Aligned_cols=218  Identities=25%  Similarity=0.344  Sum_probs=179.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++++.+||+++....++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.++ 
T Consensus       106 ~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  182 (334)
T PTZ00354        106 VMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-  182 (334)
T ss_pred             cEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 9999888 788899999999999988889999999999999999999999999999999888888999999998 


Q ss_pred             HhCCCceeeccChhh-HHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKEETD-LKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~-~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|.+.+++.... + +...+++.+++ ++|++||+.++..+..++++++++|+++.+|...+.++    ...+...+..
T Consensus       183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~  257 (334)
T PTZ00354        183 KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKV----EKFNLLPLLR  257 (334)
T ss_pred             HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcc----cccCHHHHHh
Confidence            8999888877654 4 77778877766 89999999998999999999999999999986443211    0144555566


Q ss_pred             hhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++.++.+......     +....+.++.+++++.++.+.+.+...+++++++++++.+.++...+|+++.+.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        258 KRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             hCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            7767777654431     2233456788889999999987776778999999999999988878899998754

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.94  E-value=2.8e-25  Score=179.36  Aligned_cols=216  Identities=23%  Similarity=0.258  Sum_probs=176.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~   77 (228)
                      ++++ |++++.. +++.+++.++|||+++.....+++|++|||+|++|++|++++|+|+..|++|+++++++    ++.+
T Consensus       112 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  189 (341)
T cd08290         112 LIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKE  189 (341)
T ss_pred             eEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHH
Confidence            4678 9999888 88899999999999997778899999999999999999999999999999999888765    6678


Q ss_pred             HHHHHhCCCceeeccCh--hhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           78 LLKDKLGFDDAFNYKEE--TDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                      .++ ++|++++++....  .++...++...++++|++|||+|+..+...+++++++|+++.+|.....     ....+..
T Consensus       190 ~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~  263 (341)
T cd08290         190 RLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTS  263 (341)
T ss_pred             HHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHH
Confidence            887 8999888876542  0455666665554799999999998888899999999999999864321     1233444


Q ss_pred             HHHhhhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          156 DVIYKRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ..+.+++++.+......     +......+..+++++.+|.+.+.....+   +++++.+|++.+.++...+|+|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         264 LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            56788999998876542     2333457889999999999988766677   9999999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.94  E-value=5.8e-25  Score=175.72  Aligned_cols=210  Identities=20%  Similarity=0.244  Sum_probs=170.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++++.|||+++....++++|++|||+|++|++|.+++|+|+.+|++|++++.++++.+.++ 
T Consensus       108 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  184 (320)
T cd08243         108 VYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-  184 (320)
T ss_pred             cEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 9999888 789999999999999988888999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH--Hh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV--IY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~--~~  159 (228)
                      ++|++++++. .. ++.+.+++. ++++|+++|++++..+...+++++++|+++.+|...+...   .........  +.
T Consensus       185 ~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~~~~~~~~~~~~~  258 (320)
T cd08243         185 ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWT---LEDFNPMDDIPSG  258 (320)
T ss_pred             hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcc---cCCcchhhhhhhc
Confidence            8999877654 33 666777777 4589999999999899999999999999999997543210   001111111  25


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +++.+.++.....   ....++.+++++.++.+++.+...++++++++|++.+.++...+|+++
T Consensus       259 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         259 VNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             cceEEEecchhhh---hHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            6666666654331   235788899999999998776677899999999999998888889876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.94  E-value=1.2e-24  Score=173.50  Aligned_cols=215  Identities=25%  Similarity=0.297  Sum_probs=178.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++.++++++++....++.+|++|+|+|++|++|++++++++.+|++|+++++++++.+.++ 
T Consensus       102 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  178 (320)
T cd05286         102 LVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-  178 (320)
T ss_pred             ceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            4678 8888888 788889999999999988899999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++++++..+. ++...+...+.+ ++|+++||.++.....++++++++|+++.+|.....     ....+...+..+
T Consensus       179 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  252 (320)
T cd05286         179 AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKG  252 (320)
T ss_pred             HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhc
Confidence            8999888877665 777788877766 899999999988889999999999999999865421     112334444477


Q ss_pred             hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.+.....+   +....+.+..+++++.++.+.+.....++++++.+|++.+.++...+|+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         253 SLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             CcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            888776543322   33445677889999999998877667789999999999999888888999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.94  E-value=6.7e-25  Score=177.19  Aligned_cols=208  Identities=25%  Similarity=0.332  Sum_probs=175.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. ++++++..+.|||+++.. .+++++++|||+|+.+++|++++++|+.+|++|+++++++++.+.++ 
T Consensus       132 ~~~l-p~~~~~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  207 (341)
T cd08297         132 VTPI-PDGLSFE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-  207 (341)
T ss_pred             EEEC-CCCCCHH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-
Confidence            5678 9999988 788899999999999955 58999999999999888999999999999999999999999999997 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|++.++++.+. ++...+.+.+++ ++|+++|+.+ +.....++++++++|+++.+|.....     ....+......
T Consensus       208 ~~g~~~v~~~~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~  281 (341)
T cd08297         208 ELGADAFVDFKKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVL  281 (341)
T ss_pred             HcCCcEEEcCCCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHh
Confidence            8999888888765 777788877765 8999999666 47889999999999999999865421     12344556667


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++++.+.....     .+.++.+++++.++++.+.+ ..++++++++|++.+.++...||+++++
T Consensus       282 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         282 RGITIVGSLVGT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             cccEEEEeccCC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            888888765543     47788899999999997644 5679999999999999998889999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.94  E-value=6.3e-25  Score=179.03  Aligned_cols=210  Identities=26%  Similarity=0.355  Sum_probs=174.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      +.++ |++++.. +++.++..++|||+++.....+.+|++|||+| +|++|++++++|+..|++ |++++.++++.+.++
T Consensus       153 ~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~  229 (367)
T cd08263         153 LAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK  229 (367)
T ss_pred             EEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            4678 9999988 89999999999999998888889999999996 699999999999999997 888988999999988


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.+++.+.. ++...++...++ ++|++||++++. ....++++++++|+++.+|.....    .....+...++
T Consensus       230 -~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~  303 (367)
T cd08263         230 -ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLV  303 (367)
T ss_pred             -HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHh
Confidence             8999888888766 777778777665 899999999986 899999999999999999864421    11234445555


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .+++++.++.....    ++.++.++++++++.+.+.  +...++++++.+|++.+.++...||+|++
T Consensus       304 ~~~~~~~~~~~~~~----~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         304 RRGIKIIGSYGARP----RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             hCCeEEEecCCCCc----HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            67888777543221    4678899999999999874  45667999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.94  E-value=9e-25  Score=175.30  Aligned_cols=214  Identities=22%  Similarity=0.337  Sum_probs=164.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhc--C-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG--K-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~--~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. +++.+++.+.||+.++....  . ...+++|||+|++|++|.+++|+|+.+|++|+++++++++.+.
T Consensus       109 ~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (326)
T cd08289         109 VVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY  186 (326)
T ss_pred             eEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            4678 9999988 88899999999999885433  2 3457899999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|++++++..+.  ....+...+++++|+++|++|+..+..++++++++|+++.+|.....     ....+...++
T Consensus       187 ~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~  258 (326)
T cd08289         187 LK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFI  258 (326)
T ss_pred             HH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhh
Confidence            98 8999888776542  24455555444899999999998899999999999999999976421     1123345566


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.++..... .....+.++.+...+..+.+...+..+++++++.+||+.+.+++..||+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         259 LRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             hccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            78899888754321 11223445555544433333344577789999999999999998889999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.94  E-value=1e-24  Score=178.66  Aligned_cols=214  Identities=15%  Similarity=0.182  Sum_probs=159.4

Q ss_pred             cccCCCCCCCcc---hhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHH
Q 027106            2 LRKFDPMGFPLS---YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV-VGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V-~~~~~~~~~~~   77 (228)
                      ++++ |++++..   ..++++.+++.++|+++ ...++++|++|||.| +|++|++++|+|+.+|+++ ++++.++++++
T Consensus       148 l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~  224 (393)
T TIGR02819       148 LLKF-PDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLA  224 (393)
T ss_pred             eEEC-CCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence            6788 8776532   14678889999999998 468899999999976 5999999999999999964 55567888999


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh---------------HHHHHHHccccCcEEEEEeeec
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE---------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +++ ++|++. ++.....++.+.+.+.+++ ++|++||++|.+               .++.++++++++|+++.+|...
T Consensus       225 ~a~-~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~  302 (393)
T TIGR02819       225 QAR-SFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV  302 (393)
T ss_pred             HHH-HcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence            999 999974 5443222666777777776 899999999974               7999999999999999999863


Q ss_pred             c-cCCCc------CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cc-eecccCcHHHHHHH
Q 027106          142 E-YTDGK------KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--ED-ISDGVESIPSAFTG  211 (228)
Q Consensus       142 ~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~-~~~~~~~~~~A~~~  211 (228)
                      . .....      ....+.......+++++.+.....     .+++.++++++.+|++++.  +. .++||+|+++||+.
T Consensus       303 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~  377 (393)
T TIGR02819       303 TEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE  377 (393)
T ss_pred             CcccccccccccccccccchHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence            2 11000      011222344445556655532221     2445789999999998864  34 56899999999999


Q ss_pred             hHcCCCcceEEEEec
Q 027106          212 LFQGGNIGKKVVRIT  226 (228)
Q Consensus       212 ~~~~~~~gkvvl~~~  226 (228)
                      +.+++. +|++|+++
T Consensus       378 ~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       378 FDAGAA-KKFVIDPH  391 (393)
T ss_pred             HhhCCc-eEEEEeCC
Confidence            988754 79999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.94  E-value=1.2e-24  Score=175.63  Aligned_cols=205  Identities=23%  Similarity=0.280  Sum_probs=171.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |++++.. +++++++.++|||+++... ..+.+|++|||+|+ |++|++++|+|+.+| .+|+++++++++.+.+
T Consensus       132 ~~~~-P~~ls~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~  208 (340)
T cd05284         132 LVKL-PRGLDPV-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLA  208 (340)
T ss_pred             eEEC-CCCCCHH-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence            5678 9999888 8999999999999999776 57889999999995 779999999999999 7999999999999999


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      + ++|++++++++.  .+...+++.+++ ++|+++|++|+ .....++++++++|+++.+|....       ...+....
T Consensus       209 ~-~~g~~~~~~~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~  278 (340)
T cd05284         209 E-RLGADHVLNASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDL  278 (340)
T ss_pred             H-HhCCcEEEcCCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHh
Confidence            8 999988887765  366677777766 89999999996 788999999999999999986542       12233444


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.+++++.+.....     .+.+..+++++.++.+++. ...++++++++|++.+.+++..||+++.+
T Consensus       279 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         279 VPTEISVIGSLWGT-----RAELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             hhcceEEEEEeccc-----HHHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            57888888876544     4678889999999998864 44679999999999999998889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.94  E-value=2.2e-24  Score=173.23  Aligned_cols=215  Identities=21%  Similarity=0.215  Sum_probs=170.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+.+||+++...+++++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ 
T Consensus       106 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-  182 (327)
T PRK10754        106 AAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-  182 (327)
T ss_pred             ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 9998888 788888999999999988889999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++.... ++.+.+++.+++ ++|+++||+++......+++++++|+++.+|.....     ....+...+..+
T Consensus       183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  256 (327)
T PRK10754        183 KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQK  256 (327)
T ss_pred             HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhcc
Confidence            8999888877765 788888888876 899999999998889999999999999999865421     111222222222


Q ss_pred             hce-eeceeccc---chhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIK-FQGFLAAD---HLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.. ........   .+....+.+..+++++.+|++++.  ....++++++.+|++.+.++...+|+||.+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        257 GSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             CceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            211 11111111   122334567788999999999864  356779999999999999998889999863

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.94  E-value=1.3e-24  Score=174.18  Aligned_cols=213  Identities=22%  Similarity=0.341  Sum_probs=166.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCC--C-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKP--K-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. +++.+++.+.+||.++....+.  . .+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.
T Consensus       109 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (325)
T cd05280         109 VVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADY  186 (325)
T ss_pred             EEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            5688 9999988 8999999999999998665433  5 45799999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|++++++..+. . ....+...++++|+++|++++..+..++++++++|+++.+|.....+     ...+...++
T Consensus       187 ~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~  258 (325)
T cd05280         187 LK-SLGASEVLDREDL-L-DESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFI  258 (325)
T ss_pred             HH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchhe
Confidence            98 8999888776532 1 22223333348999999999999999999999999999999754321     123344455


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.+...... +....+.++.+.+++..+. .+.+..+++++++++|++.+.+++..||+|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         259 LRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL-LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             eeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC-ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            68888888765543 2233466777777777774 444667789999999999999999889999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.94  E-value=5.4e-25  Score=178.63  Aligned_cols=202  Identities=18%  Similarity=0.196  Sum_probs=153.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh------cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---C
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI------GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---S   72 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~------~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---~   72 (228)
                      ++++ |++++ .  ++++.+++.+++.++...      .++++|++|+|+|+ |++|++++|+|+.+|++|+++++   +
T Consensus       134 ~~~~-P~~~~-~--~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~  208 (355)
T cd08230         134 LVKV-PPSLA-D--VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPP  208 (355)
T ss_pred             EEEC-CCCCC-c--ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCC
Confidence            5788 99987 4  566667777766555332      23679999999995 99999999999999999999987   6


Q ss_pred             HHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCc
Q 027106           73 KEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAA  151 (228)
Q Consensus        73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  151 (228)
                      +++.+.++ ++|++. +++.+. ++.+ ..  ..+++|+||||+|+ ..+..++++++++|+++.+|...+.    ....
T Consensus       209 ~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~  278 (355)
T cd08230         209 DPKADIVE-ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFE  278 (355)
T ss_pred             HHHHHHHH-HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----Cccc
Confidence            88989998 999986 555543 4433 21  12489999999997 4789999999999999999976541    1112


Q ss_pred             cc----hHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCC------CccccceecccCcHHHHHHHhHcCCCcceE
Q 027106          152 PE----MLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGA------IYPLEDISDGVESIPSAFTGLFQGGNIGKK  221 (228)
Q Consensus       152 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv  221 (228)
                      ++    ...++.+++++.|+....     .+.++.+++++.++.      +++.++.+++++|+.+||+.+.++.  .|+
T Consensus       279 ~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~  351 (355)
T cd08230         279 VDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKV  351 (355)
T ss_pred             cChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEE
Confidence            22    345677999999987655     355677888887766      5666778899999999999887654  599


Q ss_pred             EEEe
Q 027106          222 VVRI  225 (228)
Q Consensus       222 vl~~  225 (228)
                      +|+|
T Consensus       352 v~~~  355 (355)
T cd08230         352 VIEW  355 (355)
T ss_pred             EeeC
Confidence            9875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.94  E-value=6.7e-25  Score=177.03  Aligned_cols=196  Identities=18%  Similarity=0.157  Sum_probs=150.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHH-cC-CEEEEEeCCHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKL-FG-CYVVGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~   77 (228)
                      ++++ |++++++  .|++..+++++|+++...  ..+++|++|||.|+ |++|++++|+++. .| .+|+++++++++++
T Consensus       128 ~~~v-P~~l~~~--~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~  203 (341)
T cd08237         128 LVKL-PDNVDPE--VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLD  203 (341)
T ss_pred             eEEC-CCCCChH--HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHH
Confidence            5788 9999987  556778999999998543  45789999999995 9999999999986 55 48999999999999


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch----hHHHHHHHccccCcEEEEEeeecccCCCcCCCcc
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA----EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP  152 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  152 (228)
                      +++ +++.+..++     ++       ..+ ++|+|||++|+    ..+..++++++++|+++.+|...+      ...+
T Consensus       204 ~a~-~~~~~~~~~-----~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~  264 (341)
T cd08237         204 LFS-FADETYLID-----DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPI  264 (341)
T ss_pred             HHh-hcCceeehh-----hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------Cccc
Confidence            998 666543221     11       122 69999999994    478999999999999999996432      1245


Q ss_pred             chHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcC-----CCccccceecccC---cHHHHHHHhHcCCCcceEEEE
Q 027106          153 EMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG-----AIYPLEDISDGVE---SIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~i~~~~~~~~~~~---~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +...++.+++++.|+....     .+.++++++++.++     .+++.++.+|+++   ++.+||+...++ ..||+||+
T Consensus       265 ~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~  338 (341)
T cd08237         265 NTRMVLEKGLTLVGSSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVME  338 (341)
T ss_pred             CHHHHhhCceEEEEecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEE
Confidence            5667788999999887654     35688899999998     4666777788886   455555555444 57899998


Q ss_pred             ec
Q 027106          225 IT  226 (228)
Q Consensus       225 ~~  226 (228)
                      ++
T Consensus       339 ~~  340 (341)
T cd08237         339 WE  340 (341)
T ss_pred             ee
Confidence            74

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.94  E-value=1e-24  Score=176.83  Aligned_cols=210  Identities=21%  Similarity=0.233  Sum_probs=166.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.++..++||++++ ...++++|++|||+| +|++|++++|+|+.+|+ .|+++++++++.++++
T Consensus       133 ~~~l-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~  208 (351)
T cd08285         133 LAPL-PDGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK  208 (351)
T ss_pred             eEEC-CCCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5678 9898888 7888889999999997 678999999999997 59999999999999999 6888988999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccc--hHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE--MLD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~  156 (228)
                       ++|+++++++.+. ++...+.+.+.+ ++|+++|++|+ ..+..++++++++|+++.+|......    ....+  ...
T Consensus       209 -~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~  282 (351)
T cd08285         209 -EYGATDIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWG  282 (351)
T ss_pred             -HcCCceEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhh
Confidence             8999888888765 777788777766 89999999997 58899999999999999998754311    11111  111


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc---ccceecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP---LEDISDGVESIPSAFTGLFQGGN-IGKKVVRI  225 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~  225 (228)
                      ...+...+.+.....    .++.++++++++.+|++++   .+...++++++++|++.+.+++. ..|++|++
T Consensus       283 ~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         283 VGMGHKTINGGLCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             hhccccEEEEeecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            223444554433211    1367888999999999988   23445799999999999999874 67999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.94  E-value=5.7e-25  Score=172.90  Aligned_cols=187  Identities=18%  Similarity=0.207  Sum_probs=151.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+.+.+.|+|+++. .....+|++|||+|+ |++|++++|+|+.+|++ |++++.++++.++++
T Consensus        87 ~~~l-P~~~~~~-~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~  162 (280)
T TIGR03366        87 IVPV-PDDLPDA-VAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL  162 (280)
T ss_pred             EEEC-CCCCCHH-HhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            6789 9999988 78888999999999994 456679999999985 99999999999999995 888988999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.+++..+   ..+.+++.+.+ ++|++||++|. ..+..++++++++|+++.+|...+.    ...+.++..++
T Consensus       163 -~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~  234 (280)
T TIGR03366       163 -SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVV  234 (280)
T ss_pred             -HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHH
Confidence             999988877643   24455666665 89999999986 5789999999999999999965321    12245677888


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcC--CCc--cccceecccCcH
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--AIY--PLEDISDGVESI  205 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~i~--~~~~~~~~~~~~  205 (228)
                      .+++++.|+....     .+.++++++++.++  ++.  +.++.+||++|+
T Consensus       235 ~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       235 RRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             hCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            9999999987655     46789999999975  443  345666788763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.93  E-value=2.7e-24  Score=173.95  Aligned_cols=210  Identities=22%  Similarity=0.278  Sum_probs=175.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.++.+++|||+++....++.++++|+|+| .|++|++++|+|+..|++|++++.++++.+.++ 
T Consensus       131 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-  206 (345)
T cd08260         131 LVRL-PDDVDFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-  206 (345)
T ss_pred             eEEC-CCCCCHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence            5678 9999888 78889999999999998888999999999999 699999999999999999999999999999998 


Q ss_pred             HhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|++++++.++ . ++...+....++++|++||+.|+ ..+...+++++++|+++.+|.......   ....+...+..
T Consensus       207 ~~g~~~~i~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~  282 (345)
T cd08260         207 ELGAVATVNASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVA  282 (345)
T ss_pred             HhCCCEEEccccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhh
Confidence            899988888876 4 77777777665589999999985 688899999999999999987543210   12334455557


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +++++.+.....     .+.++.+++++.++++.+.  +...++++++++|++.+.++...+|+|++
T Consensus       283 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         283 RELEIVGSHGMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             cccEEEeCCcCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            788888776544     4678889999999998764  45667999999999999999888898864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.93  E-value=2.5e-24  Score=173.50  Aligned_cols=209  Identities=16%  Similarity=0.225  Sum_probs=166.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC-----CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK-----GEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~   75 (228)
                      ++++ |+++++. +++.+++.++|||+++....++++     |++|||+|++|++|++++|+|+.+ |++|+++++++++
T Consensus       109 ~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~  186 (336)
T TIGR02817       109 VGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPES  186 (336)
T ss_pred             cccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHH
Confidence            5678 9999988 888999999999999988888887     999999999999999999999998 9999999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                      .+.++ ++|+++++++..  ++...+++..++++|+++|+.+ +......+++++++|+++.++...         ..+.
T Consensus       187 ~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~  254 (336)
T TIGR02817       187 QEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDI  254 (336)
T ss_pred             HHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccc
Confidence            99998 899988887553  5666777654448999999975 478899999999999999875321         2233


Q ss_pred             HHHHhhhceeeceecc--c-c--hhHH--HHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEE
Q 027106          155 LDVIYKRIKFQGFLAA--D-H--LNLY--QDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~--~-~--~~~~--~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ..+..+++++.+....  . .  +...  ...++++++++.++.+++.+...+   +++++++|++.+.+++..||++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       255 SPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             hhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            3444455666653322  1 1  1111  256899999999999987655555   468999999999999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.93  E-value=2e-24  Score=174.98  Aligned_cols=208  Identities=18%  Similarity=0.238  Sum_probs=172.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+.+.++|||+++.....+++|++|+|+| +|++|++++|+|+.+|+ +|++++.++++.+.++
T Consensus       141 ~~~~-p~~~s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~  217 (350)
T cd08240         141 YLVD-PGGLDPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK  217 (350)
T ss_pred             eeeC-CCCCCHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            3567 9999988 78889999999999998777777999999996 69999999999999999 7899998999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++.+++..+. ++.+.+.+..++++|++||+.|. ..+..++++|+++|+++.+|.....      ...+......
T Consensus       218 -~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~  289 (350)
T cd08240         218 -AAGADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPL  289 (350)
T ss_pred             -HhCCcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhh
Confidence             8999888877665 66666776655589999999985 7899999999999999999865431      1222333445


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++++.+.....     .+.+..++++++++.+++.....++++++.+|++.+.++...||+++++
T Consensus       290 ~~~~i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         290 RALTIQGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             cCcEEEEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            788887776655     3678889999999999877677789999999999999888889999853

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.93  E-value=1.9e-24  Score=176.06  Aligned_cols=211  Identities=26%  Similarity=0.342  Sum_probs=172.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.++++++||+.++.....+++|++|||+| .|++|++++|+|+..|+ .|+++++++++.+.++
T Consensus       152 ~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~  228 (365)
T cd08278         152 VVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAK  228 (365)
T ss_pred             EEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5788 9999988 88999999999999998888999999999997 59999999999999999 6888988999999888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++.++++.+. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|.....    .....+...++.
T Consensus       229 -~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~  302 (365)
T cd08278         229 -ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLV  302 (365)
T ss_pred             -HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhh
Confidence             8999888887765 77777777774489999999986 6889999999999999999865321    122445556657


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc-ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP-LEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +++++.++.....  ...+.++++++++.++++.+ .+...++++++++|++.+.+++.. |++|+
T Consensus       303 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         303 SGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             cCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            8888887765332  11467788999999999865 344567999999999999887654 88774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.93  E-value=3.4e-24  Score=171.82  Aligned_cols=212  Identities=23%  Similarity=0.338  Sum_probs=167.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGE-KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~-~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |++++.. +++.+++.+.+|+.++...  +.+.+|+ +|+|+|++|++|.+++++|+.+|++|++++.++++.+.
T Consensus       108 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~  185 (323)
T TIGR02823       108 LVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDY  185 (323)
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            5688 9999888 7888999999999887544  3488999 99999999999999999999999999998888888899


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|++.+++..+. +.  .++....+++|+++||+|++.+..++++++++|+++.+|.....     ....+...++
T Consensus       186 ~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~  256 (323)
T TIGR02823       186 LK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFI  256 (323)
T ss_pred             HH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHh
Confidence            97 8999887776543 32  44444444799999999998889999999999999999975321     1122334555


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.+...... .....+.+..+.+++..+.+.+. ...++++++++||+.+.+++..+|+++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       257 LRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             hcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            78888888664422 22334567788888888888764 44679999999999999999889999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=4.4e-24  Score=169.78  Aligned_cols=205  Identities=24%  Similarity=0.264  Sum_probs=166.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++++++.+.|||+++...... +|++|+|+|++|++|.+++++|+..|++|+.+++++++.+.++ 
T Consensus        99 ~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  174 (305)
T cd08270          99 LAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-  174 (305)
T ss_pred             eEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5688 9999998 8899999999999999766655 5999999999999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh--
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY--  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--  159 (228)
                      ++|++.+++...  +       ..++++|+++|++|+..+..++++++++|+++.+|.....     ....+...+..  
T Consensus       175 ~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~  240 (305)
T cd08270         175 ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGE-----PAVFNPAAFVGGG  240 (305)
T ss_pred             HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCC-----cccccHHHHhccc
Confidence            799875543321  1       1224799999999998889999999999999999865421     12233444433  


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.++.++.... +....+.+..+++++.++++.+.+..+++++++++|++.+.++...||+|+.+
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         241 GGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             ccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            578888777654 33345778999999999999987777789999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.93  E-value=7.4e-24  Score=170.24  Aligned_cols=216  Identities=37%  Similarity=0.540  Sum_probs=172.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++  .. +++++++++.|||+++....++++|++|+|+|++|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus       107 ~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  181 (329)
T cd08250         107 AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-  181 (329)
T ss_pred             eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-
Confidence            4567 765  23 578899999999999988889999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-----CCCccchHH
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-----KRAAPEMLD  156 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~~~~~  156 (228)
                      ++|++.+++..+. ++...+.+..++++|++||+.|+..+..++++++++|+++.+|.........     ..... ...
T Consensus       182 ~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~  259 (329)
T cd08250         182 SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL-PPK  259 (329)
T ss_pred             HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccc-cHH
Confidence            8998888776654 6666666655458999999999989999999999999999998654310000     00111 234


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcccc--ceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLE--DISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .+.+++++.++....+.....+.+.++++++.++.+.+..  ...++++++.+|++.+.++...+|++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         260 LLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            5678888888876544333467788999999999988743  3347999999999999988878899874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.93  E-value=6.8e-24  Score=170.96  Aligned_cols=206  Identities=26%  Similarity=0.380  Sum_probs=172.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.++.++.|||+++....+++++++|||.| +|++|++++++|+..|++|++++.++++.+.++ 
T Consensus       131 ~~~l-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-  206 (338)
T cd08254         131 LVPV-PDGVPFA-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-  206 (338)
T ss_pred             eEEC-CCCCCHH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            5678 9999888 88889999999999998888899999999976 699999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|.+.+++..+. ...+.+ ....+ ++|+++||.|. ..+..++++|+++|+++.+|....      ....+...+..
T Consensus       207 ~~g~~~~~~~~~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~  278 (338)
T cd08254         207 ELGADEVLNSLDD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIA  278 (338)
T ss_pred             HhCCCEEEcCCCc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhh
Confidence            8999887776654 555555 44444 89999999985 688999999999999999986432      12344556677


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.++.+++...     .+.+..++++++++.+.+. ...++++++.++++.+.+++..+|+|+++
T Consensus       279 ~~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         279 RELRIIGSFGGT-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             CccEEEEeccCC-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            888888766554     5778889999999999876 55679999999999999999889999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=9.6e-24  Score=169.84  Aligned_cols=208  Identities=25%  Similarity=0.393  Sum_probs=177.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+++||+++....++++|++|+|+| +|++|++++++|+..|++|++++.++++.+.++ 
T Consensus       126 ~~~l-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-  201 (336)
T cd08276         126 LVRA-PDHLSFE-EAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-  201 (336)
T ss_pred             eEEC-CCCCCHH-HhhhhhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 8888887 78888999999999998888999999999996 699999999999999999999999999999998 


Q ss_pred             HhCCCceeeccC-hhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKE-ETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|.+.+++... . ++...+++.+++ ++|+++|+.++.....++++++++|+++.+|.....     .........+.
T Consensus       202 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~  275 (336)
T cd08276         202 ALGADHVINYRTTP-DWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLT  275 (336)
T ss_pred             HcCCCEEEcCCccc-CHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhh
Confidence            789888887765 4 677788888776 899999999988899999999999999999875432     11344566778


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +++++.++....     .+.+.++++++.++.+.+.....+++++++++++.+.++...+|++++
T Consensus       276 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         276 KGATLRGIAVGS-----RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             cceEEEEEecCc-----HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            899999887655     467888999999998887766778999999999999988888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.93  E-value=7e-24  Score=173.86  Aligned_cols=209  Identities=22%  Similarity=0.242  Sum_probs=169.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++++++.++|||+++ ...++++|++|||+| +|++|.+++++|+..|+ +|+++++++++.+.++
T Consensus       151 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~  226 (386)
T cd08283         151 PFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR  226 (386)
T ss_pred             EEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            4688 9999988 8888999999999999 789999999999997 59999999999999998 6999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch----------------------hHHHHHHHccccCcEEEEE
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA----------------------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~----------------------~~~~~~~~~l~~~G~~v~~  137 (228)
                       +++...++++...+++...+++.+++ ++|++||++|+                      ..+..++++++++|+++.+
T Consensus       227 -~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~  305 (386)
T cd08283         227 -SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSII  305 (386)
T ss_pred             -HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEE
Confidence             77434566665541377778888776 89999999874                      3678899999999999999


Q ss_pred             eeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcC
Q 027106          138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQG  215 (228)
Q Consensus       138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~  215 (228)
                      |.....     ....+....+.+++++.+.....     .+.++.+++++.++++.+.  ....++++++.+|++.+.++
T Consensus       306 g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~  375 (386)
T cd08283         306 GVYGGT-----VNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKK  375 (386)
T ss_pred             cCCCCC-----cCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhC
Confidence            865431     12334445677888888765433     4678899999999999874  44567999999999999887


Q ss_pred             C-CcceEEEEe
Q 027106          216 G-NIGKKVVRI  225 (228)
Q Consensus       216 ~-~~gkvvl~~  225 (228)
                      . ..+|++|++
T Consensus       376 ~~~~~k~~~~~  386 (386)
T cd08283         376 EDGCIKVVLKP  386 (386)
T ss_pred             CCCeEEEEecC
Confidence            7 567999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.93  E-value=9.4e-24  Score=170.29  Aligned_cols=207  Identities=23%  Similarity=0.332  Sum_probs=168.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++++++..++|||+++ ...++++|++|||+| +|++|++++++|+. .|++|+++++++++.+.++
T Consensus       129 ~~~~-p~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~  204 (338)
T PRK09422        129 AVKV-PEGLDPA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK  204 (338)
T ss_pred             eEeC-CCCCCHH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH
Confidence            5678 9999998 8899999999999998 778999999999999 59999999999998 4999999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCcc-EEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGID-IYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d-~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++.++++....++...+++..+ ++| +++++.++..+..++++++++|+++.+|....      ....+......
T Consensus       205 -~~g~~~v~~~~~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~  276 (338)
T PRK09422        205 -EVGADLTINSKRVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVL  276 (338)
T ss_pred             -HcCCcEEecccccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhh
Confidence             9999888887541166667776665 688 55666666789999999999999999986532      11234455566


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ++..+.++....     ++.++.+++++++|.+.+.+. .++++++++||+.+.++...||+++.+.
T Consensus       277 ~~~~~~~~~~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        277 DGIEVVGSLVGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             cCcEEEEecCCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            777776655433     466888999999999876544 4699999999999999988899998764

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.93  E-value=8.6e-24  Score=170.23  Aligned_cols=205  Identities=25%  Similarity=0.322  Sum_probs=166.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++.+.+||+++... +++++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ 
T Consensus       129 ~~~l-p~~~~~~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-  204 (334)
T PRK13771        129 LVKV-PPNVSDE-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-  204 (334)
T ss_pred             eEEC-CCCCCHH-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5678 9998888 7889999999999999665 8999999999999999999999999999999999999999999987 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++ ++++++..   ++.+.+++.  +++|+++||+|+.....++++++++|+++.+|......    .........+.++
T Consensus       205 ~~-~~~~~~~~---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~  274 (334)
T PRK13771        205 KY-ADYVIVGS---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP----TYSLRLGYIILKD  274 (334)
T ss_pred             HH-HHHhcCch---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC----CcccCHHHHHhcc
Confidence            77 66655543   344455544  36999999999988899999999999999999754211    1012233345678


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++.+.....     ++.++.+++++.++.+++.+...++++++++||+.+.++...+|+++.+
T Consensus       275 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        275 IEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             cEEEEecCCC-----HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            8887764333     5678899999999999877777789999999999999888889999865

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.93  E-value=2.9e-23  Score=165.97  Aligned_cols=214  Identities=28%  Similarity=0.394  Sum_probs=177.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++++.+||+++....++.+|++|+|+|+++++|++++++++..|++|+++++++++.+.++ 
T Consensus       110 ~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  186 (325)
T cd08253         110 LVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-  186 (325)
T ss_pred             cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 8888888 788999999999999988799999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++...+.+.+++ ++|+++||.++......+++++++|+++.+|....      ....+...++.+
T Consensus       187 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~  259 (325)
T cd08253         187 QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAK  259 (325)
T ss_pred             HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhc
Confidence            8999888877765 677777777665 89999999998888888999999999999987541      112333445667


Q ss_pred             hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++.+...... +....+.+..+.+++.++.+.+.....+++++++++++.+..+...+|+++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         260 EASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            777776654432 34456778888899999998877777789999999999999888889999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.92  E-value=1.3e-23  Score=169.79  Aligned_cols=205  Identities=20%  Similarity=0.213  Sum_probs=167.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++++++.++|||+++. ..++.+|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       134 ~~~~-p~~l~~~-~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~  209 (344)
T cd08284         134 LLKL-PDGLSDE-AALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA  209 (344)
T ss_pred             eEEC-CCCCCHH-HhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence            5678 9999888 88889999999999995 48899999999997 69999999999999997 8999988888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|+. .++.... ++...+.+.+++ ++|++||++++ ..+..++++++++|+++.+|.....     .........+
T Consensus       210 -~~g~~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~  281 (344)
T cd08284         210 -ALGAE-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAY  281 (344)
T ss_pred             -HhCCe-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHh
Confidence             89975 4566554 677778777775 89999999986 6889999999999999999976522     1123445566


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .+++++.+....     .++.+.++++++.++++.+.  +...++++++++|++.+.+++. +|+|++
T Consensus       282 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         282 NKNLTLRFGRCP-----VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             hcCcEEEEecCC-----cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            778887654222     25778899999999998863  4566799999999999988877 899985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.92  E-value=1.8e-23  Score=168.58  Aligned_cols=206  Identities=23%  Similarity=0.277  Sum_probs=168.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+ ..++++++++ ...++.+|++|||+| +|++|.+++|+|+.+|++|+++++++++.+.++ 
T Consensus       127 ~~~~-p~~~~~~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-  200 (337)
T cd08261         127 ALLV-PEGLSLD-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-  200 (337)
T ss_pred             eEEC-CCCCCHH-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-
Confidence            3578 9999888 66655 6778899888 778999999999997 599999999999999999999988999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|+++++++.+. ++.+.+.+.+++ ++|+++|+.|+ ..+..++++++++|+++.+|....      ....+...+..
T Consensus       201 ~~g~~~v~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~  273 (337)
T cd08261         201 ELGADDTINVGDE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHK  273 (337)
T ss_pred             HhCCCEEecCccc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHh
Confidence            8999898888876 777888877766 89999999976 688999999999999999886532      11233445556


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCC-CcceEEEEe
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGG-NIGKKVVRI  225 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~  225 (228)
                      +++++.+....     ..+.++.+++++.+|.+++  .+...++++++.+|++.+.+++ ..+|+|+++
T Consensus       274 ~~~~~~~~~~~-----~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         274 KELTILGSRNA-----TREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             CCCEEEEeccC-----ChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            77777665322     2567888999999999988  6667789999999999999884 778999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08251 polyketide_synthase polyketide synthase

Probab=99.92  E-value=2.1e-23  Score=165.32  Aligned_cols=212  Identities=22%  Similarity=0.327  Sum_probs=170.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.++..+++||+++ +..++++|++|+|+++++++|.+++|+++.+|++|+++++++++.+.++ 
T Consensus        87 ~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  162 (303)
T cd08251          87 VVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-  162 (303)
T ss_pred             eEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            4678 9998888 7888999999999999 5789999999999999999999999999999999999999999999997 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++.... ++...+...+++ ++|+++|++++......+++++++|+++.+|......    ....... .+.+
T Consensus       163 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~-~~~~  236 (303)
T cd08251         163 QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS-VLSN  236 (303)
T ss_pred             HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh-Hhhc
Confidence            8999888887765 777788887776 8999999998888899999999999999998653210    1112222 2333


Q ss_pred             hceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +..+........    +....+.+.++.+++.+|.+++.....+++++++++++.+.++...+|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         237 NQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             CceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            444433332211    333456788899999999998777777899999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.92  E-value=2.1e-23  Score=168.76  Aligned_cols=207  Identities=20%  Similarity=0.212  Sum_probs=169.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.+++.++|||.++....++++|++|||.|+ |++|.+++|+|+.+| .+|++++.++++.+.++
T Consensus       132 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~  208 (345)
T cd08286         132 LYKL-PEGVDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK  208 (345)
T ss_pred             eEEC-CCCCCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5678 8888887 788899999999998777889999999999875 999999999999999 69999888888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++.+. ++...+...+++ ++|++|||++. ..++.+++.++++|+++.+|....      ....+....+
T Consensus       209 -~~g~~~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~  280 (345)
T cd08286         209 -KLGATHTVNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLW  280 (345)
T ss_pred             -HhCCCceeccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHh
Confidence             8999888888765 777777777766 89999999986 588899999999999999985431      1234555657


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCC--CcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGG--NIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~--~~gkvvl~~  225 (228)
                      .+++++.+....      .+.+..+.++++++.+.+.  +..+++++++++|++.+....  ...|++|++
T Consensus       281 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         281 IKNITITTGLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hcCcEEEeecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            788888765332      2567888899999998764  456789999999999988763  345999864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.92  E-value=3.3e-23  Score=166.91  Aligned_cols=210  Identities=26%  Similarity=0.408  Sum_probs=176.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+.+|++++....++.+|++++|+|+++++|++++++++..|++|+++++++++.+.++ 
T Consensus       132 ~~~~-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-  208 (342)
T cd08266         132 LLPI-PDNLSFE-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-  208 (342)
T ss_pred             ceeC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5678 8888888 788888999999999888899999999999999889999999999999999999999999989887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      .++.+.+++..+. +....+...+.+ ++|++++++|...+...+++++++|+++.+|.....     ....+....+.+
T Consensus       209 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~  282 (342)
T cd08266         209 ELGADYVIDYRKE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWR  282 (342)
T ss_pred             HcCCCeEEecCCh-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhc
Confidence            7888777776654 666667666655 899999999998889999999999999999876532     123344456778


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +..+.+.....     ...+..++++++++.+.+.+...++++++++|++.+.++...+|+++++
T Consensus       283 ~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         283 QLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             ceEEEEEecCC-----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            88888877655     4678889999999999887777889999999999999888788999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.92  E-value=6.3e-23  Score=164.09  Aligned_cols=215  Identities=27%  Similarity=0.380  Sum_probs=178.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++++++++.++|+++....++++|++|+|+|++|++|.+++++++..|++|+++++++++.+.++ 
T Consensus       105 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  181 (325)
T TIGR02824       105 VLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-  181 (325)
T ss_pred             cEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 8888887 788899999999999878899999999999999999999999999999999999999999988887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++...+....++ ++|++++++++..+...+++++++|+++.+|......    . ..+...++.+
T Consensus       182 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~  255 (325)
T TIGR02824       182 ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRK----A-ELDLGPLLAK  255 (325)
T ss_pred             HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCc----C-CCChHHHHhc
Confidence            8998777776655 677777777665 8999999999888889999999999999998654211    1 3445555588


Q ss_pred             hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.+......     +....+.+.++++++.++.+.+.....++++++.++++.+.++...+|+++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       256 RLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             CCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            999998875442     22345667888899999998877777789999999999999888888998864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.92  E-value=5.7e-23  Score=164.02  Aligned_cols=213  Identities=28%  Similarity=0.418  Sum_probs=176.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.++.++.++|+++.+...+.++++|+|+|++|++|++++++++..|++|+++++++++.+.++ 
T Consensus       105 ~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-  181 (323)
T cd05276         105 LLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-  181 (323)
T ss_pred             hccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            4678 8888887 788999999999999988889999999999999999999999999999999999999999999987 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++...+.+...+ ++|+++|+.|+......+++++++|+++.+|......     ...+...++.+
T Consensus       182 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~  255 (323)
T cd05276         182 ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRK  255 (323)
T ss_pred             HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHh
Confidence            8998877777665 777777777665 8999999999988889999999999999998654321     12344455578


Q ss_pred             hceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      ++++.++.....     +......+.++.+++.++++.+.....++++++++|++.+.++...+|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         256 RLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             CCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            888888765432     223345678888999999998777777899999999999998887788874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.92  E-value=1.2e-23  Score=170.27  Aligned_cols=208  Identities=24%  Similarity=0.280  Sum_probs=168.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.++++++|||+++ ...++++|++|||.| .|++|.+++|+|+.+|. +|+++++++++.+.++
T Consensus       134 ~~~l-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~  209 (347)
T cd05278         134 LAKI-PDGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK  209 (347)
T ss_pred             EEEC-CCCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4678 9999888 8889999999999998 778999999999976 59999999999999997 8888888888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++.+. ++.+.++..+++ ++|++||+.++ ..+..++++|+++|+++.+|.....     .........+
T Consensus       210 -~~g~~~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~  282 (347)
T cd05278         210 -EAGATDIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWF  282 (347)
T ss_pred             -HhCCcEEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhh
Confidence             8998888888776 777888877765 89999999987 6899999999999999999854321     0001122334


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~  225 (228)
                      .+++.+.+.....     .+.++++++++.++.+.+.  ....++++++.+|++.+..++. .+|+++++
T Consensus       283 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         283 GKNLTFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             hceeEEEeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            5777777654332     4678899999999999864  4556799999999999988776 67998764

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.92  E-value=8.9e-24  Score=168.23  Aligned_cols=191  Identities=12%  Similarity=0.120  Sum_probs=146.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++..  ++.+ .++.|||+++.. . ..++++|+|+| +|++|++++|+|+.+|++ |++++.++++++.+.
T Consensus       114 ~~~i-p~~~~~~--~a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~  186 (308)
T TIGR01202       114 VCRL-DPALGPQ--GALL-ALAATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT  186 (308)
T ss_pred             ceeC-CCCCCHH--HHhh-hHHHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh
Confidence            5678 8888765  4444 567899999954 3 34689999998 599999999999999996 556677777766655


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       .+   .++|+.+  .        .++++|++|||+|+. .++.++++++++|+++.+|....      ...++...++.
T Consensus       187 -~~---~~i~~~~--~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~  246 (308)
T TIGR01202       187 -GY---EVLDPEK--D--------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFM  246 (308)
T ss_pred             -hc---cccChhh--c--------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------Ccccccchhhh
Confidence             33   3344321  1        123799999999984 78999999999999999997532      12344556677


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      +++++.++....     ++.++++++++++|++.+.  ++..+||+|+++||+.+.++...+|++|+
T Consensus       247 ~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       247 KEARLRIAAEWQ-----PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cceEEEEecccc-----hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            888888766544     4678999999999999864  67778999999999998877767899874

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.92  E-value=2.7e-23  Score=167.95  Aligned_cols=206  Identities=23%  Similarity=0.259  Sum_probs=167.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ +++.+||+++.. .++++|++|||+| +|++|.+++|+|+..|++ |++++.++++.+.++
T Consensus       133 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~  207 (343)
T cd08235         133 VLKL-PDNVSFE-EAALV-EPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK  207 (343)
T ss_pred             EEEC-CCCCCHH-HHHhh-hHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            6788 9999888 55554 788999999954 5899999999997 599999999999999998 988988999999988


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|.++++++++. ++.+.+...+++ ++|+++||.++ ..+...+++++++|+++.+|......    ....+.....
T Consensus       208 -~~g~~~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~  281 (343)
T cd08235         208 -KLGADYTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIH  281 (343)
T ss_pred             -HhCCcEEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHh
Confidence             8999888888776 777778777766 89999999996 58899999999999999998644321    1233345566


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .+++.+.++....     .+.++.+++++.++.+.+  .+...++++++.+|++.+.+++ .+|+|++
T Consensus       282 ~~~~~l~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         282 YREITITGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             hCceEEEEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            6777776665444     466888899999999874  3456679999999999999999 8899874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.92  E-value=1.8e-23  Score=168.57  Aligned_cols=201  Identities=22%  Similarity=0.259  Sum_probs=167.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+.+.+.|||+++.. .++++|++|+|.| .|++|++++++|+.+|++|+++++++++.+.++ 
T Consensus       136 ~~~l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-  210 (337)
T cd05283         136 VFKI-PEGLDSA-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-  210 (337)
T ss_pred             eEEC-CCCCCHH-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence            5678 9999988 788899999999999855 5699999999977 699999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++.... +...   . ..+++|+++||++.. .+..++++++++|+++.+|.....      ...+...++.+
T Consensus       211 ~~g~~~vi~~~~~-~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~  279 (337)
T cd05283         211 KLGADEFIATKDP-EAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFG  279 (337)
T ss_pred             HcCCcEEecCcch-hhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcC
Confidence            8999888876653 3322   1 234899999999986 589999999999999999875421      13445666778


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.++....     .+.++.+++++.++++++.+ ..++++++++||+.+.+++..||+|++
T Consensus       280 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         280 RKSVAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ceEEEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            99999888765     46788899999999998754 567999999999999999988999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.92  E-value=1.1e-23  Score=169.91  Aligned_cols=207  Identities=24%  Similarity=0.269  Sum_probs=166.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCC----------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKP----------KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      ++++ |+++++. +++.+++.+.|||+++....++          ++|++|+|+|++|++|++++++|+.+|++|++++ 
T Consensus       110 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-  186 (339)
T cd08249         110 TAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-  186 (339)
T ss_pred             eEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-
Confidence            4678 9898888 7888999999999998766554          7999999999999999999999999999999888 


Q ss_pred             CHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHcccc--CcEEEEEeeecccCCCcC
Q 027106           72 SKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNT--YGRVAVCGVISEYTDGKK  148 (228)
Q Consensus        72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~  148 (228)
                      ++++.+.++ ++|++++++..+. ++.+.+++.+++++|+++|++|+ ..+..+++++++  +|+++.+|......    
T Consensus       187 ~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~----  260 (339)
T cd08249         187 SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET----  260 (339)
T ss_pred             CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc----
Confidence            568889897 8999888888765 77788877776689999999998 899999999999  99999998654211    


Q ss_pred             CCccchHHHHhhhceeeceeccc-------chhHHHHHHHHHHHHHHcCCCccccceecc--cCcHHHHHHHhHcCC-Cc
Q 027106          149 RAAPEMLDVIYKRIKFQGFLAAD-------HLNLYQDFISTTCNHLRSGAIYPLEDISDG--VESIPSAFTGLFQGG-NI  218 (228)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~--~~~~~~A~~~~~~~~-~~  218 (228)
                              ....+..+.......       .+......++.+.+++.++++.+.+...++  ++++++|++.+.+++ ..
T Consensus       261 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  332 (339)
T cd08249         261 --------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSG  332 (339)
T ss_pred             --------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccc
Confidence                    001122222221111       122334678889999999999987666777  999999999999998 88


Q ss_pred             ceEEEEe
Q 027106          219 GKKVVRI  225 (228)
Q Consensus       219 gkvvl~~  225 (228)
                      +|+|+++
T Consensus       333 ~kvvv~~  339 (339)
T cd08249         333 EKLVVRL  339 (339)
T ss_pred             eEEEEeC
Confidence            9999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.92  E-value=2.2e-23  Score=168.96  Aligned_cols=203  Identities=19%  Similarity=0.198  Sum_probs=163.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ .+++|+|+++ ...++++|++|+|.| +|++|++++++|+.+|+ .++++++++++.+.++
T Consensus       142 ~~~l-P~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~  216 (350)
T cd08256         142 VHKV-PDDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR  216 (350)
T ss_pred             eEEC-CCCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH
Confidence            3688 9998887 66666 8999999998 778999999999955 69999999999999998 5677888888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH-
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV-  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-  157 (228)
                       ++|++.+++..+. ++...+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|.....      .......+ 
T Consensus       217 -~~g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~  288 (350)
T cd08256         217 -KFGADVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIG  288 (350)
T ss_pred             -HcCCcEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhh
Confidence             8999888887765 777788887776 89999999995 6788899999999999999864321      12222222 


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      ..+++++.++....      ..+.++++++.+|.+++.  +...++++++.+||+.+.+++..+|+++
T Consensus       289 ~~~~~~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         289 DRKELDVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             cccccEEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            24566676665443      467889999999999874  5667899999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.92  E-value=4.5e-23  Score=167.95  Aligned_cols=210  Identities=20%  Similarity=0.241  Sum_probs=167.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+.+++.+||+++...+++++|++|||+| +|++|++++++|+.+|++ |+++++++++.+.++
T Consensus       149 ~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~  225 (365)
T cd05279         149 LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK  225 (365)
T ss_pred             eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5678 9999988 78888899999999988889999999999997 599999999999999995 777777999999998


Q ss_pred             HHhCCCceeeccChh-hHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccc-cCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMN-TYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|++++++..+.. ++.+.+++.+++++|+++|++|. ..+..++++++ ++|+++.+|....    .....++...+
T Consensus       226 -~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~~~~~~~~~~  300 (365)
T cd05279         226 -QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----GTEATLDPNDL  300 (365)
T ss_pred             -HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----CCceeeCHHHH
Confidence             99998888765421 45666777665689999999985 78899999999 9999999986431    11224444555


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                       .++.++.|++...+.  ..+.+..++++++++.+.+.  ...+++++++++||+.+.+++.. |+++
T Consensus       301 -~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         301 -LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             -hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence             567777776554321  14678889999999998764  56677999999999998876654 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.92  E-value=5e-23  Score=166.42  Aligned_cols=203  Identities=22%  Similarity=0.285  Sum_probs=162.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.+ .++.+|++++ ..+++++|++|||+| .|++|++++|+|+.+|++ |+++++++++.+.++
T Consensus       130 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~  204 (343)
T cd05285         130 CHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK  204 (343)
T ss_pred             cEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4678 9999888 56555 6888999997 789999999999987 599999999999999997 889988899999998


Q ss_pred             HHhCCCceeeccChhhH---HHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           81 DKLGFDDAFNYKEETDL---KAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~---~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                       ++|++.+++.++. ++   .+.+.+.+.+ ++|++|||.|+. .++.++++++++|+++.+|.....      ...+..
T Consensus       205 -~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~  276 (343)
T cd05285         205 -ELGATHTVNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLS  276 (343)
T ss_pred             -HcCCcEEeccccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHH
Confidence             8999988887764 43   6677777766 899999999985 889999999999999999854321      123334


Q ss_pred             HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCC-CcceEEE
Q 027106          156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGG-NIGKKVV  223 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl  223 (228)
                      ....+++.+.++....      +.++.+++++.++.+.  +.+..+++++++.+|++.+.+++ ..+|++|
T Consensus       277 ~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         277 AASLREIDIRGVFRYA------NTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HHhhCCcEEEEeccCh------HHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            5556677766654332      5678889999999875  34556779999999999998885 5689998

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.92  E-value=8e-23  Score=160.83  Aligned_cols=213  Identities=25%  Similarity=0.401  Sum_probs=171.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++++.+++.++.+..++++|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ 
T Consensus        74 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  150 (293)
T cd05195          74 VVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-  150 (293)
T ss_pred             eEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 8888887 788888999999999988889999999999998999999999999999999999999989989888 


Q ss_pred             HhC--CCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           82 KLG--FDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        82 ~~g--~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      +.|  ++.+++.... ++.+.+++.+++ ++|+++|+.++..+..++++++++|+++.+|.....+    ...... ..+
T Consensus       151 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~-~~~  224 (293)
T cd05195         151 ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKLGM-RPF  224 (293)
T ss_pred             HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCccch-hhh
Confidence            777  6677777665 777888887766 8999999999989999999999999999998754321    011111 223


Q ss_pred             hhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          159 YKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      .+++.+.......+    +....+.+..+.+++.++++++.....++++++.++++.+..+...+|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         225 LRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             ccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            34566555544332    233456788899999999998877778899999999999998887788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.92  E-value=7.3e-23  Score=160.87  Aligned_cols=213  Identities=23%  Similarity=0.381  Sum_probs=170.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+.++|.++.....+.+|++|+|+|++|++|++++++++..|++|+++++++++.+.++ 
T Consensus        70 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  146 (288)
T smart00829       70 VVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-  146 (288)
T ss_pred             eEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            4678 9999988 788889999999999978889999999999998999999999999999999999999999999998 


Q ss_pred             HhCC--CceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           82 KLGF--DDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        82 ~~g~--~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++|.  +.+++..+. ++.+.+....++ ++|+++|++++.....++++++++|+++.+|......    ....+... +
T Consensus       147 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~  220 (288)
T smart00829      147 ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-F  220 (288)
T ss_pred             HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-h
Confidence            8998  677777665 677777777665 8999999999888889999999999999998653210    11122222 3


Q ss_pred             hhhceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          159 YKRIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      .+++.+.+......   +....+.+..+.+++.++++.+.....+++++++++++.+..+...+|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      221 RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            45666655543321   222345678888999999988766667899999999999998877778764

Enoylreductase in Polyketide synthases.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.92  E-value=7.3e-23  Score=164.52  Aligned_cols=204  Identities=27%  Similarity=0.356  Sum_probs=165.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++++.+||+++.. .++.+++++||+|++|++|++++++++..|.+|+++++++++.+.++ 
T Consensus       129 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  204 (332)
T cd08259         129 LVKL-PDNVSDE-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-  204 (332)
T ss_pred             eEEC-CCCCCHH-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-
Confidence            5678 9999888 788999999999999966 89999999999999999999999999999999999998988888887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|.+.+++..   ++.+.+.+..  ++|++++++|......++++++++|+++.+|......     ..........++
T Consensus       205 ~~~~~~~~~~~---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~  274 (332)
T cd08259         205 ELGADYVIDGS---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKE  274 (332)
T ss_pred             HcCCcEEEecH---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCC
Confidence            88887766543   3444454433  6999999999988889999999999999998654321     111223333566


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ..+.+.....     .+.++.+++++.+|.+++.+...++++++++||+.+.++...+|++++
T Consensus       275 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         275 IRIIGSISAT-----KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             cEEEEecCCC-----HHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            6666654322     567888999999999988777788999999999999998888899874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK10083 putative oxidoreductase; Provisional

Probab=99.92  E-value=8.1e-23  Score=164.93  Aligned_cols=205  Identities=17%  Similarity=0.149  Sum_probs=161.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL-FGCY-VVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~-V~~~~~~~~~~~~~   79 (228)
                      ++++ |++++.. . +++..++.+++.++ ...++++|++|+|+| .|++|++++|+|+. +|++ ++++++++++.+++
T Consensus       128 ~~~i-p~~~~~~-~-a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~  202 (339)
T PRK10083        128 AHRI-PDAIADQ-Y-AVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA  202 (339)
T ss_pred             eEEC-cCCCCHH-H-HhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence            5678 9998887 4 44677888888654 778999999999999 69999999999996 6994 77788889999999


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      + ++|++.++++.+. ++...+..  .+ ++|++||++|+ ..+..++++++++|+++.+|....      ....+....
T Consensus       203 ~-~~Ga~~~i~~~~~-~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~  272 (339)
T PRK10083        203 K-ESGADWVINNAQE-PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGI  272 (339)
T ss_pred             H-HhCCcEEecCccc-cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHH
Confidence            8 9999888887764 66665543  23 57899999995 589999999999999999986532      112234444


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCC-CcceEEEEecC
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGG-NIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~~~  227 (228)
                      ..+++++.+....      .+.++.+++++.+|++++.  +..+++++++++|++.+.++. ..+|+++++.+
T Consensus       273 ~~~~~~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        273 TGKELSIFSSRLN------ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             hhcceEEEEEecC------hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            5567776665432      3678899999999999874  567789999999999998654 56899998854

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.91  E-value=7.9e-23  Score=166.45  Aligned_cols=210  Identities=21%  Similarity=0.286  Sum_probs=170.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.+++.+++||.++....++.+|++|||+| .|++|.+++++|+.+|++ |+++++++++.+.++
T Consensus       148 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~  224 (363)
T cd08279         148 VVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR  224 (363)
T ss_pred             EEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence            5678 9999988 78888999999999998889999999999996 599999999999999995 999998999999887


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++++++.... ++...+...+++ ++|+++|++++ ..+..++++++++|+++.+|.....    .....+...+.
T Consensus       225 -~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~  298 (363)
T cd08279         225 -RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELF  298 (363)
T ss_pred             -HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHh
Confidence             8999888887765 777778777755 89999999994 6889999999999999999864420    11234455555


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKV  222 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvv  222 (228)
                      .++..+.++.....  ..++.++++++++.++++.+.  +...++++++.+|++.+.+++..+.++
T Consensus       299 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         299 LSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             hcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            56777676654321  125778899999999999863  556789999999999999888665544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=7.9e-23  Score=165.11  Aligned_cols=205  Identities=22%  Similarity=0.211  Sum_probs=159.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++ +++.++++||+++ ..+++++|++|||+| +|++|.+++|+|+.+|++ +++++.++++.+.++
T Consensus       129 ~~~l-P~~~s~~-~a-~~~~~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~  203 (341)
T cd08262         129 LLRV-PDGLSME-DA-ALTEPLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALAL  203 (341)
T ss_pred             eEEC-CCCCCHH-Hh-hhhhhHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4578 9998887 44 4778899999996 789999999999997 599999999999999995 667777888988888


Q ss_pred             HHhCCCceeeccChhhHHH---HHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           81 DKLGFDDAFNYKEETDLKA---ALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~---~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                       ++|++++++++.. +...   .+.....+ ++|+++|++|+ ..+..++++++++|+++.+|.....     . .....
T Consensus       204 -~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~-~~~~~  275 (341)
T cd08262         204 -AMGADIVVDPAAD-SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-----D-NIEPA  275 (341)
T ss_pred             -HcCCcEEEcCCCc-CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-----C-ccCHH
Confidence             8999888876643 2211   23444444 89999999987 4888899999999999999865321     1 11222


Q ss_pred             HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ....++..+.+.....     .+.++++++++.+|.+.+.  +...++++++++|++.+.+++..+|+|++
T Consensus       276 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         276 LAIRKELTLQFSLGYT-----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHhhcceEEEEEeccc-----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            2245667766544333     3578889999999999864  35677999999999999999888999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.91  E-value=2e-22  Score=160.95  Aligned_cols=214  Identities=27%  Similarity=0.373  Sum_probs=176.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+..++.+|++++.....+.+|++|+|+|++|++|++++++|+..|++|++++.++++.+.++ 
T Consensus       105 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  181 (323)
T cd08241         105 VFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-  181 (323)
T ss_pred             ceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-
Confidence            4678 8888887 677889999999999977889999999999999899999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++.+.+...+++ ++|.++|+.|+.....++++++++|+++.+|.....     .........+.+
T Consensus       182 ~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~  255 (323)
T cd08241         182 ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLK  255 (323)
T ss_pred             HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhc
Confidence            8898777777665 777788887776 899999999998888999999999999999864321     111223345668


Q ss_pred             hceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          161 RIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       161 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ++++.+.....+    +....+.+.++++++.++.+.+.....++++++.++++.+.++...+|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         256 NISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             CcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            888888765543    2234567888999999999887777778999999999999888877888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.91  E-value=9.9e-23  Score=166.54  Aligned_cols=212  Identities=21%  Similarity=0.202  Sum_probs=166.2

Q ss_pred             cccCCCCCCCcch--hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSY--QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++..  +++.++++++|||+++ ..+++++|++|+|.| .|++|++++|+|+..|+ +|+++++++++.++
T Consensus       140 ~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~  216 (375)
T cd08282         140 LLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDL  216 (375)
T ss_pred             EEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5678 88888862  3677888999999999 788999999999977 59999999999999998 89999889999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh------------HHHHHHHccccCcEEEEEeeecccCCC
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE------------MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                      ++ ++|+. .+++.+. ++.+.+.+.+++++|+++||+|+.            .+..++++++++|+++.+|........
T Consensus       217 ~~-~~g~~-~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~  293 (375)
T cd08282         217 AE-SIGAI-PIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPG  293 (375)
T ss_pred             HH-HcCCe-EeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccc
Confidence            98 89984 4666654 677777777666899999999875            488999999999999988864322110


Q ss_pred             c-------CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC
Q 027106          147 K-------KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN  217 (228)
Q Consensus       147 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~  217 (228)
                      .       ....++...++.++..+.+.....     ++.++.+++++.++++.+.  +...++++++++|++.+.++. 
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-  367 (375)
T cd08282         294 AGDAAAKQGELSFDFGLLWAKGLSFGTGQAPV-----KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-  367 (375)
T ss_pred             cccccccCccccccHHHHHhcCcEEEEecCCc-----hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-
Confidence            0       011234455556666655543322     4678889999999999874  667789999999999999888 


Q ss_pred             cceEEEEe
Q 027106          218 IGKKVVRI  225 (228)
Q Consensus       218 ~gkvvl~~  225 (228)
                      .+|+|+++
T Consensus       368 ~~kvvv~~  375 (375)
T cd08282         368 ETKVVIKP  375 (375)
T ss_pred             ceEEEeCC
Confidence            88999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.91  E-value=1.1e-22  Score=164.43  Aligned_cols=211  Identities=25%  Similarity=0.319  Sum_probs=167.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ ..+++||+++. ..++++|++|||+| +|.+|.+++|+|+.+|++ |+++++++++.+.++
T Consensus       127 ~~~l-P~~~~~~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~  201 (343)
T cd08236         127 LIKI-PDHVDYE-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR  201 (343)
T ss_pred             eEEC-cCCCCHH-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            5678 9998887 66666 67889999995 78899999999997 599999999999999996 999998899989887


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.+++..+. . ...+....++ ++|+++||.|+ ..+..++++|+++|+++.+|...+.   ...........+
T Consensus       202 -~~g~~~~~~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~  275 (343)
T cd08236         202 -ELGADDTINPKEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKIL  275 (343)
T ss_pred             -HcCCCEEecCccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHH
Confidence             8999888887765 5 6677777666 79999999976 5889999999999999999865421   111122344556


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHc-CCCcceEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQ-GGNIGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvl  223 (228)
                      .+++++.++.........++.++++.+++.++++.  +.+...++++++.++++.+.+ +...+|+|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         276 RKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            78888888776433223356788899999999986  345567799999999999998 556788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.91  E-value=3.8e-22  Score=159.75  Aligned_cols=215  Identities=29%  Similarity=0.359  Sum_probs=177.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++++.++|.++.....+.++++|+|+|++|++|++++++++..|+++++++.++++.+.++ 
T Consensus       110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-  186 (328)
T cd08268         110 VVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-  186 (328)
T ss_pred             cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            4678 8888887 788899999999999988889999999999999999999999999999999999999999989887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++...+...+.+ ++|+++++.++.....++++++++|+++.+|.....     ....+....+.+
T Consensus       187 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~  260 (328)
T cd08268         187 ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKK  260 (328)
T ss_pred             HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhc
Confidence            8898877777665 677777776665 899999999998889999999999999999865421     112333445778


Q ss_pred             hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.+.+......   +......++.+.+++.++.+.+.....++++++.++++.+..+...+|+++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         261 SLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             CCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            888877665431   33445677888888889988877667789999999999998888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.91  E-value=2.5e-22  Score=161.00  Aligned_cols=212  Identities=20%  Similarity=0.277  Sum_probs=167.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |++++.. +++.++..+++++.++..  ..+.. +|++|+|+|++|++|.+++|+|+.+|++|++++.++++.+.
T Consensus       109 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~  186 (324)
T cd08288         109 LVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADY  186 (324)
T ss_pred             eeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            5678 9999888 888899999999877641  23445 67899999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|+++++++.+. .  ..++..+++++|.++|++++......+..++.+|+++.+|...+.     ....+...++
T Consensus       187 ~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~  257 (324)
T cd08288         187 LR-SLGASEIIDRAEL-S--EPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFI  257 (324)
T ss_pred             HH-hcCCCEEEEcchh-h--HhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhh
Confidence            97 9999888887643 2  245555555799999999987777888999999999999975321     1123344455


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.+...... .....+.+..+.+++.++.+.+. ...++++++++|++.+.+++..+|+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         258 LRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             ccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            78889888754332 22235678888889999988764 56779999999999999999889999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.91  E-value=1.7e-22  Score=162.84  Aligned_cols=210  Identities=20%  Similarity=0.259  Sum_probs=168.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC-----CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK-----GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~   75 (228)
                      +.++ |++++.. +++.+++.+.+||+++.+.+++.+     |++|+|+|++|++|++++|+|+.+| ++|+++++++++
T Consensus       110 ~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~  187 (336)
T cd08252         110 VGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPES  187 (336)
T ss_pred             eeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhh
Confidence            4678 8888888 788889999999999888888887     9999999988999999999999999 899999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                      .+.++ ++|++++++...  ++...++...++++|+++|++|+ ..+..++++++++|+++.+|...        ...+.
T Consensus       188 ~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~  256 (336)
T cd08252         188 IAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDL  256 (336)
T ss_pred             HHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------Ccccc
Confidence            99998 899988887653  55556664443489999999985 68899999999999999998542        12333


Q ss_pred             HHHHhhhceeeceecccc-------hhHHHHHHHHHHHHHHcCCCccccce---ecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          155 LDVIYKRIKFQGFLAADH-------LNLYQDFISTTCNHLRSGAIYPLEDI---SDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ..++.+++++.+......       +......++++++++.+|.+.+....   .++++++.+|++.+.++...+|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         257 GPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             hhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            444467888877554321       11334678899999999999875332   35999999999999998888898874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=2.1e-22  Score=160.56  Aligned_cols=208  Identities=17%  Similarity=0.148  Sum_probs=164.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++  . .++.+..+++++++++. ..++++|++|+|+| +|++|.+++|+|+.+|++ |+++++++++.++++
T Consensus        98 ~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~  171 (312)
T cd08269          98 AVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR  171 (312)
T ss_pred             eEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4677 8876  3 23322378889999985 88999999999997 599999999999999998 999999998989888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.+++.... ++...+.+.+++ ++|+++||.|+ ..+..++++++++|+++.+|.....     ....+.....
T Consensus       172 -~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~-----~~~~~~~~~~  244 (312)
T cd08269         172 -ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDG-----PRPVPFQTWN  244 (312)
T ss_pred             -HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-----CcccCHHHHh
Confidence             8999888876655 777888887776 99999999976 5889999999999999999865411     1233445666


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCC-cceEEE
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGN-IGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~-~gkvvl  223 (228)
                      .+++.+.++.... +....+.++.++++++++.+.+.  +..+++++++++|++.+.+++. .+|+++
T Consensus       245 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         245 WKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             hcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            7777777665433 22335788999999999999873  4567899999999999998864 578876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.91  E-value=2.4e-22  Score=164.68  Aligned_cols=208  Identities=20%  Similarity=0.197  Sum_probs=160.8

Q ss_pred             cccCCCCCCC-----cchhhhccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 027106            2 LRKFDPMGFP-----LSYQVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE   74 (228)
Q Consensus         2 ~~~v~P~~~~-----~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~   74 (228)
                      ++++ |++++     ..+++++++.++++||+++... .++++|++|||+| .|++|++++|+|+.+|+ +|++++++++
T Consensus       162 ~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~  239 (384)
T cd08265         162 AWEI-NELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEE  239 (384)
T ss_pred             eEEC-CccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence            3566 76532     2224777888999999999666 7899999999996 59999999999999999 7999998888


Q ss_pred             HHHHHHHHhCCCceeeccCh--hhHHHHHHHHCCC-CccEEEcCcch--hHHHHHHHccccCcEEEEEeeecccCCCcCC
Q 027106           75 KVTLLKDKLGFDDAFNYKEE--TDLKAALKRYFPD-GIDIYFDNVGA--EMQEAAIANMNTYGRVAVCGVISEYTDGKKR  149 (228)
Q Consensus        75 ~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~-~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  149 (228)
                      +.+.++ ++|+++++++.+.  .++...+++.+++ ++|+|+|+.|+  ..+..++++++++|+++.+|....      .
T Consensus       240 ~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~  312 (384)
T cd08265         240 RRNLAK-EMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------T  312 (384)
T ss_pred             HHHHHH-HcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------C
Confidence            888888 8999888876531  1566778888876 89999999986  378899999999999999986432      1


Q ss_pred             CccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          150 AAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      ..........+..++.+......    ...++++++++.++.+.+.  +...++++++.+|++.+.++ ..+|+|+
T Consensus       313 ~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         313 VPLHLEVLQVRRAQIVGAQGHSG----HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             CcccHHHHhhCceEEEEeeccCC----cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            12333455556667766653221    3568889999999999864  45667999999999996554 5678875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.91  E-value=3.4e-22  Score=163.17  Aligned_cols=213  Identities=20%  Similarity=0.261  Sum_probs=162.8

Q ss_pred             CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLL   79 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~   79 (228)
                      +++++ |+++++. +++.+.+++.|||+++...+++++|++|+|+| +|++|++++++|+..|+ +|+++++++++++.+
T Consensus       155 ~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         155 AVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             ceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            36788 9999998 88888999999999987889999999999997 59999999999999999 899999999999999


Q ss_pred             HHHhCCCceeeccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHcc-ccCcEEEEEeeecccCCCcCCCccchHH
Q 027106           80 KDKLGFDDAFNYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANM-NTYGRVAVCGVISEYTDGKKRAAPEMLD  156 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~  156 (228)
                      + ++|++++++..+. ++....+.+.+++++|+++||+|+ ..+..++..+ +++|+++.+|.....    ........ 
T Consensus       232 ~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-  305 (373)
T cd08299         232 K-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-  305 (373)
T ss_pred             H-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-
Confidence            8 8999888876643 136666666665689999999996 5677766655 579999999975321    01122222 


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+.++.++.++....+.  .++.+.++++.+.++.+++  .+..+++++++.+|++.+.+++. .|+++++
T Consensus       306 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         306 LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            23467788887765431  1245556667777765543  45667899999999999887764 4888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=7.4e-22  Score=158.05  Aligned_cols=209  Identities=25%  Similarity=0.399  Sum_probs=170.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. .++.++..+.+||+++.+..++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++ 
T Consensus       110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-  185 (326)
T cd08272         110 LALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-  185 (326)
T ss_pred             cccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-
Confidence            4678 8888888 7888899999999998888999999999999999999999999999999999999987 8888887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++...  .+...+...+++ ++|+++|+.++......+++++++|+++.+|....         ........+
T Consensus       186 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~  254 (326)
T cd08272         186 SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFR  254 (326)
T ss_pred             HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhh
Confidence            899877776654  366677777776 89999999998888889999999999999986421         111222357


Q ss_pred             hceeeceeccc--c----hhHHHHHHHHHHHHHHcCCCccccc-eecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAAD--H----LNLYQDFISTTCNHLRSGAIYPLED-ISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.+.+.....  .    +....+.+..+++++.++.+.+.+. ..++++++.++++.+.++...+|+++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         255 NATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             cceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            77777665432  1    3334578889999999999887654 7789999999999998888788999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.90  E-value=3.5e-22  Score=160.30  Aligned_cols=196  Identities=21%  Similarity=0.280  Sum_probs=156.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++.+.+||+++.. .++++|++|+|+|++|++|++++++|+.+|++|+++++    .+.++ 
T Consensus       129 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-  200 (325)
T cd08264         129 LFKI-PDSISDE-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-  200 (325)
T ss_pred             ceeC-CCCCCHH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-
Confidence            5788 9999988 888899999999999954 89999999999999999999999999999999988873    26666 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|++++++..   +....+++.+ +++|+++|++|+..+..++++++++|+++.+|.....     ....+...+..++
T Consensus       201 ~~g~~~~~~~~---~~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~  271 (325)
T cd08264         201 EFGADEVVDYD---EVEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQ  271 (325)
T ss_pred             HhCCCeeecch---HHHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcC
Confidence            89988877654   2344556555 6799999999998999999999999999999864211     1244556666677


Q ss_pred             ceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceE
Q 027106          162 IKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKK  221 (228)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv  221 (228)
                      .++.+.....     ++.++.+++++...+  ..+...++++++++|++.+.++...+|+
T Consensus       272 ~~~~~~~~~~-----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         272 ISIIGSTGGT-----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             cEEEEccCCC-----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            7777766554     467778888886444  4455678999999999999888776675

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.90  E-value=7.4e-22  Score=159.41  Aligned_cols=206  Identities=21%  Similarity=0.309  Sum_probs=161.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++..  .++++.++.+|++++  ...+++|++|+|.| +|++|.+++|+|+.+|++ |+++++++++.+.++
T Consensus       130 ~~~l-p~~~~~~--~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~  203 (340)
T TIGR00692       130 IWKN-PKSIPPE--YATIQEPLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK  203 (340)
T ss_pred             cEEC-cCCCChH--hhhhcchHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4678 8888875  556788889999887  35678999999977 599999999999999996 888888888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.+++.... ++.+.+.+..++ ++|+++||.|+ ..+...+++++++|+++.+|..... .   ... ....++
T Consensus       204 -~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~---~~~-~~~~~~  276 (340)
T TIGR00692       204 -KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-V---TID-FTNKVI  276 (340)
T ss_pred             -HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-c---ccc-hhhhhh
Confidence             8999888887765 777888777765 89999999885 6888999999999999999865321 1   111 122455


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++.+.++....    ..+.+.++++++.++.++  +.+...++++++.++++.+.+++. ||+|+++
T Consensus       277 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       277 FKGLTIYGITGRH----MFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             hcceEEEEEecCC----chhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            5677766654222    135678899999999987  345667799999999999988775 9999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.90  E-value=9.6e-22  Score=159.03  Aligned_cols=207  Identities=20%  Similarity=0.250  Sum_probs=164.8

Q ss_pred             cccCCCCCCCcch-h---hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 027106            2 LRKFDPMGFPLSY-Q---VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKV   76 (228)
Q Consensus         2 ~~~v~P~~~~~~~-~---aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~   76 (228)
                      ++++ |+++++.. .   .+++.+.+.+|++++ ...++++|++|+|.| +|++|++++|+|+..|++ ++++++++++.
T Consensus       130 ~~~l-P~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~  206 (345)
T cd08287         130 LVKV-PGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQ  206 (345)
T ss_pred             eEEC-CCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            5678 88887721 1   123446789999998 578999999999977 699999999999999995 78888888888


Q ss_pred             HHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           77 TLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                      +.++ ++|++.++++... ++.+.+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|....      ....+.
T Consensus       207 ~~~~-~~ga~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~  278 (345)
T cd08287         207 ALAR-EFGATDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDV  278 (345)
T ss_pred             HHHH-HcCCceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCH
Confidence            8888 8999888888765 777788887776 89999999986 688999999999999999886542      123344


Q ss_pred             HHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          155 LDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ...+.+++++.+.....     .+.++++++++.++++++.  +...++++++++|++.+.++... |++|++
T Consensus       279 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~  345 (345)
T cd08287         279 RELFFRNVGLAGGPAPV-----RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP  345 (345)
T ss_pred             HHHHhcceEEEEecCCc-----HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence            45677888887754333     4688999999999999874  45667999999999998876654 999863

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.90  E-value=5.4e-22  Score=160.94  Aligned_cols=219  Identities=23%  Similarity=0.247  Sum_probs=158.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFG-C-YVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. +++.++..+.|||+++.... ++++|++|+|+|+++++|.+++|+|+..| . .|+++. ++++.+.
T Consensus       116 ~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~  192 (352)
T cd08247         116 ITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAEL  192 (352)
T ss_pred             eEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHH
Confidence            4688 9999998 88889999999999997767 89999999999998999999999999874 4 677776 4555667


Q ss_pred             HHHHhCCCceeeccChhh---HHHH-HHHHCCC-CccEEEcCcch-hHHHHHHHccc---cCcEEEEEeeecccCCCcCC
Q 027106           79 LKDKLGFDDAFNYKEETD---LKAA-LKRYFPD-GIDIYFDNVGA-EMQEAAIANMN---TYGRVAVCGVISEYTDGKKR  149 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~---~~~~-~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~  149 (228)
                      ++ ++|++.+++..+. +   +... ++..+++ ++|++|||.|+ .....++++++   ++|+++.++.....++....
T Consensus       193 ~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~  270 (352)
T cd08247         193 NK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDT  270 (352)
T ss_pred             HH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchh
Confidence            76 8999888887654 4   4344 3444424 89999999998 68889999999   99999987533211100000


Q ss_pred             -----CccchHHHHhhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          150 -----AAPEMLDVIYKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       150 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                           ........+.++..+..+..... .....+.++.+++++.++.+++.+...++++++++|++.+.+++..||+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  350 (352)
T cd08247         271 FNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVI  350 (352)
T ss_pred             hhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence                 00001111223333333222111 000136788899999999998777778899999999999999888899998


Q ss_pred             Ee
Q 027106          224 RI  225 (228)
Q Consensus       224 ~~  225 (228)
                      ++
T Consensus       351 ~~  352 (352)
T cd08247         351 KV  352 (352)
T ss_pred             eC
Confidence            63

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.90  E-value=9.3e-22  Score=158.90  Aligned_cols=206  Identities=22%  Similarity=0.301  Sum_probs=160.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++ +...+.++++++..  ...+|++|+|+| .|++|.+++|+|+.+|+ +|++++.++++.++++
T Consensus       132 ~~~i-P~~l~~~-~~~-~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~  205 (341)
T PRK05396        132 VWKI-PDDIPDD-LAA-IFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR  205 (341)
T ss_pred             eEEC-cCCCCHH-HhH-hhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            4678 9888887 444 45666777766532  346899999987 59999999999999999 6888888888988888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++++++. ++.+.+++.+.+ ++|++|||.|+ ..++.++++++++|+++.+|.....      ...+...+.
T Consensus       206 -~lg~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~  277 (341)
T PRK05396        206 -KMGATRAVNVAKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVI  277 (341)
T ss_pred             -HhCCcEEecCccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHh
Confidence             8999888888765 778888877765 89999999886 6889999999999999999865421      122346667


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcC-CCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSG-AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      .++.++.++.....    .+.+..+++++.++ ++.+.+...++++++.+||+.+.++. .||++++|+
T Consensus       278 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        278 FKGLTIKGIYGREM----FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             hcceEEEEEEccCc----cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            77788777653221    24456788888888 45555667779999999999998877 799999874

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=2e-21  Score=155.55  Aligned_cols=210  Identities=23%  Similarity=0.311  Sum_probs=167.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+.+++.+|++++...+++++|++|+|+|+++++|++++++++..|++|+++. ++++.+.+. 
T Consensus       107 ~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-  182 (325)
T cd08271         107 VLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-  182 (325)
T ss_pred             eEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-
Confidence            4678 8898888 78889999999999998889999999999999988999999999999999999887 667778887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++...+.....+ ++|++++++++......+++++++|+++.++.....       .  ....+.+
T Consensus       183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-------~--~~~~~~~  252 (325)
T cd08271         183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-------S--PDPPFTR  252 (325)
T ss_pred             HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-------c--chhHHhh
Confidence            8998888877665 677777777766 899999999987777899999999999998754311       0  1122334


Q ss_pred             hceeeceecccc----h----hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH----L----NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.+....+...    +    ...++.+.++++++.++.+.+.....++++++.+|++.+.++...+|+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         253 ALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             cceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            444443332211    1    2345677889999999999876667779999999999999888888998864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.89  E-value=1.1e-21  Score=157.61  Aligned_cols=212  Identities=26%  Similarity=0.340  Sum_probs=160.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++++.+||+++....++.+|++|+|+|++|++|++++++|+..|++|++++. +++.+.++ 
T Consensus       105 ~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-  180 (331)
T cd08273         105 LVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-  180 (331)
T ss_pred             eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-
Confidence            4578 9998888 788899999999999988789999999999999999999999999999999999997 88888887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-------
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-------  154 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-------  154 (228)
                      ++|+.. ++.... ++...  ...++++|+++|++++.....++++++++|+++.+|.......  .....++       
T Consensus       181 ~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~  254 (331)
T cd08273         181 ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQ--GRRSLAALGSLLAR  254 (331)
T ss_pred             HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCC--ccccccchhhhhhh
Confidence            898654 444433 44333  2333589999999999889999999999999999987543211  0000100       


Q ss_pred             -----HHHHhhhceeeceeccc--chhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          155 -----LDVIYKRIKFQGFLAAD--HLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       155 -----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                           .....++.++.+.....  .+....+.+..+++++.+|.+++.+...++++++++|++.+.++...||+|+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         255 LAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             hhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence                 01112223332222211  1334467899999999999998877777899999999999998888889886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.89  E-value=1.8e-21  Score=156.78  Aligned_cols=203  Identities=27%  Similarity=0.338  Sum_probs=159.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ +.+.++++++ ...++++|++|||+| .|++|.+++++|+..|++ |+++++++++.+.++
T Consensus       127 ~~~l-P~~~~~~-~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~  201 (334)
T cd08234         127 VYKI-PDNLSFE-EAALA-EPLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK  201 (334)
T ss_pred             cEEC-cCCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4678 9998888 55544 7888999998 778999999999997 599999999999999996 888998999999997


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|.+.+++..+. +.... +...++++|+++||.+. .....++++++++|+++.+|.....    ..........+.
T Consensus       202 -~~g~~~~~~~~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~  274 (334)
T cd08234         202 -KLGATETVDPSRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQ  274 (334)
T ss_pred             -HhCCeEEecCCCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHh
Confidence             8998877777654 44444 33333489999999975 6888999999999999999865421    112233444455


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +++++.+....      .+.++.++++++++++.+.  +...++++++++|++.+.+ ...+|+|+
T Consensus       275 ~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         275 KELTIIGSFIN------PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             CCcEEEEeccC------HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            77777776543      3568889999999998753  4567799999999999998 67789886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=99.89  E-value=1.3e-21  Score=158.03  Aligned_cols=205  Identities=22%  Similarity=0.273  Sum_probs=159.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++..  +++++.++.++++++.  ...++|++|||+| .|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       132 ~~~l-P~~~~~~--~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~  205 (341)
T cd05281         132 LWKN-DKDIPPE--IASIQEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK  205 (341)
T ss_pred             cEEC-cCCCCHH--HhhhhhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4678 8887765  5677788889998874  4568999999987 59999999999999999 7998888888888888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|.+++++.... ++. .+++..++ ++|++|||.|+ .....++++|+++|+++.+|.... .  ..  ........
T Consensus       206 -~~g~~~~~~~~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~--~~--~~~~~~~~  277 (341)
T cd05281         206 -KMGADVVINPREE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-P--VD--IDLNNLVI  277 (341)
T ss_pred             -HhCcceeeCcccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-C--cc--cccchhhh
Confidence             8999888877654 676 77777776 99999999976 578899999999999999986542 1  10  11122355


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .++..+.++.....    .+.++.+.+++.++.+.+  .+...++++++++||+.+.++. .||+|+++
T Consensus       278 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         278 FKGLTVQGITGRKM----FETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             ccceEEEEEecCCc----chhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            56777766553221    355778899999999864  3455679999999999999988 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.89  E-value=2e-21  Score=156.87  Aligned_cols=201  Identities=19%  Similarity=0.269  Sum_probs=157.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++ ++.+++++|+++.....+ +|++|||.| +|++|.+++|+|+.+|. +|+++++++++.++++
T Consensus       133 ~~~i-P~~~~~~-~aa-~~~~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~  207 (339)
T cd08232         133 CVPL-PDGLSLR-RAA-LAEPLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR  207 (339)
T ss_pred             eEEC-cCCCCHH-Hhh-hcchHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            4678 9998887 454 467888999999766666 999999987 59999999999999999 8999998888888887


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHC-C-CCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYF-P-DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|.+++++.++. ++    .+.. . +++|+++|+.++ ..++.++++|+++|+++.+|....      ....+....
T Consensus       208 -~~g~~~vi~~~~~-~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~  275 (339)
T cd08232         208 -AMGADETVNLARD-PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNAL  275 (339)
T ss_pred             -HcCCCEEEcCCch-hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHH
Confidence             8998888877654 32    2222 2 369999999985 688999999999999999985431      112233444


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.+++.+.++...      .+.++.+++++.++.+++.  +..+++++++++|++.+.++...||+|+++
T Consensus       276 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         276 VAKELDLRGSFRF------DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hhcceEEEEEecC------HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            5677777766532      3567889999999998643  566789999999999999888889999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.89  E-value=9.3e-22  Score=159.36  Aligned_cols=216  Identities=24%  Similarity=0.378  Sum_probs=157.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCC----CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKK----GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~   77 (228)
                      ++++ |++++.. +++.+++.+.|||+++.+.+.+.+    |++|+|+|++|++|++++++|+.+|++|++++++ ++.+
T Consensus       124 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~  200 (350)
T cd08248         124 VSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIP  200 (350)
T ss_pred             eecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHH
Confidence            4678 9999888 788899999999999977777754    9999999999999999999999999999988855 5667


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-CC--Cccc-
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-KR--AAPE-  153 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~-  153 (228)
                      .++ ++|.+.+++..+. ++...+..  .+++|+++|+.|+.....++++++++|+++.+|.....+... ..  .... 
T Consensus       201 ~~~-~~g~~~~~~~~~~-~~~~~l~~--~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  276 (350)
T cd08248         201 LVK-SLGADDVIDYNNE-DFEEELTE--RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKS  276 (350)
T ss_pred             HHH-HhCCceEEECCCh-hHHHHHHh--cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhh
Confidence            777 8999888877654 55555443  237999999999989999999999999999998643211000 00  0000 


Q ss_pred             hHHHHhhhcee--eceec-ccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEE
Q 027106          154 MLDVIYKRIKF--QGFLA-ADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       154 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ...+.......  ..... ........+.+.++++++.+|.+.+.+...++++++.+|++.+.++...+|++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         277 AVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            00111111110  00000 0001112567899999999999987777788999999999999988877888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.89  E-value=1.2e-21  Score=156.90  Aligned_cols=194  Identities=24%  Similarity=0.243  Sum_probs=152.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+ .+..+++.++ +..++++|++|||+| +|++|.+++|+|+.+|++|++++.++++.+.++ 
T Consensus       123 ~~~l-P~~~~~~-~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-  196 (319)
T cd08242         123 LHVV-PDLVPDE-QAVFA-EPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-  196 (319)
T ss_pred             eEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence            5678 9888877 44433 5556666665 778999999999997 699999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++++...         ..++++|+++||.|+ ..+..++++++++|+++..+....      ....+...+..+
T Consensus       197 ~~g~~~~~~~~~~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~  261 (319)
T cd08242         197 RLGVETVLPDEAE---------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVN  261 (319)
T ss_pred             HcCCcEEeCcccc---------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheec
Confidence            7999876665421         122389999999987 588899999999999998665332      123445566677


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCC--ccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAI--YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i--~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++.+.....        ++.+++++.++++  .+.+...++++++.+||+.+.++. .+|+||++
T Consensus       262 ~~~i~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         262 EITLVGSRCGP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             ceEEEEEeccc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            88877765433        6678899999999  445667889999999999998666 47999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.89  E-value=7.9e-21  Score=152.88  Aligned_cols=219  Identities=28%  Similarity=0.416  Sum_probs=169.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++.. +++.++++++++|+++....++++|++|+|+|++|++|++++++|+.. +..++... .+++.+.++
T Consensus       104 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~  180 (337)
T cd08275         104 VFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK  180 (337)
T ss_pred             eEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH
Confidence            4678 8888887 788888999999999988899999999999999999999999999998 33333332 455778887


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-----------CC
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-----------KR  149 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~  149 (228)
                       ++|.+.+++.... ++...++..+++++|+++||.|+......+++++++|+++.+|.....+...           ..
T Consensus       181 -~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd08275         181 -ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNR  258 (337)
T ss_pred             -HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccc
Confidence             8998887777665 7777777776558999999999988899999999999999998654221000           00


Q ss_pred             CccchHHHHhhhceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          150 AAPEMLDVIYKRIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ........+.+++++.++.....   .......+.++++++.++.+.+.....+++++++++++.+.++...+|+++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         259 PKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             cccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            11222455678888888765422   11223567889999999998887777789999999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.89  E-value=6.1e-21  Score=155.46  Aligned_cols=204  Identities=22%  Similarity=0.284  Sum_probs=157.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++ +..++.++++++ ...++.+|++|+|+| .|++|.+++|+|+.+|++ |++++.++++.+.++
T Consensus       149 ~~~~-P~~l~~~-~aa-~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~  223 (364)
T PLN02702        149 CFKL-PENVSLE-EGA-MCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK  223 (364)
T ss_pred             eEEC-CCCCCHH-HHh-hhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            4678 9998887 443 334566688888 778999999999997 599999999999999994 777888888888888


Q ss_pred             HHhCCCceeecc--ChhhHHHHHHHH---CCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           81 DKLGFDDAFNYK--EETDLKAALKRY---FPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        81 ~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                       ++|++.++++.  +. ++.+.+...   +++++|++||+.|+ ..+..++++++++|+++.+|...+      ......
T Consensus       224 -~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~  295 (364)
T PLN02702        224 -QLGADEIVLVSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPL  295 (364)
T ss_pred             -HhCCCEEEecCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccH
Confidence             89998776543  23 555555544   23489999999994 789999999999999999986432      112345


Q ss_pred             HHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceeccc--CcHHHHHHHhHcCCCcceEEEE
Q 027106          155 LDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGV--ESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~--~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      .....+++++.+++...      ..++.++++++++++.  +.+...|++  +++++|++.+.+++..+|+++.
T Consensus       296 ~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        296 TPAAAREVDVVGVFRYR------NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHhCccEEEEeccCh------HHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            56677888888766432      4678889999999986  334556444  7999999999988878899985

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.89  E-value=3.6e-21  Score=154.78  Aligned_cols=201  Identities=26%  Similarity=0.371  Sum_probs=161.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      +.++ |++++.. +++.+++.+++||+++.. .++++|++|||+| .|++|++++++|+..|.+|+++++++++.+.++ 
T Consensus       129 ~~~~-p~~~~~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-  203 (330)
T cd08245         129 TVLL-PDGLPLA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELAR-  203 (330)
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence            4678 9998888 788899999999999954 8899999999997 488999999999999999999999999999997 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++.... +....    ..+++|+++|+.+. .....++++++++|+++.+|.....     ........++.+
T Consensus       204 ~~g~~~~~~~~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~  273 (330)
T cd08245         204 KLGADEVVDSGAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMK  273 (330)
T ss_pred             HhCCcEEeccCCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhC
Confidence            8998877766543 32222    22479999999774 6888999999999999999864321     112224456677


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +.++.++....     ...++.+++++.++.+.+ ....++++++.+||+.+.++...+|+|+
T Consensus       274 ~~~~~~~~~~~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         274 RQSIAGSTHGG-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CCEEEEeccCC-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            77877776654     467888899999999886 4456799999999999998888888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.88  E-value=3.9e-21  Score=154.46  Aligned_cols=195  Identities=19%  Similarity=0.180  Sum_probs=155.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. ++++++++++|||+++ +.+++++|++|||+| +|++|++++++++..|.+|+++++++++.+.++ 
T Consensus       134 ~~~l-p~~~~~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-  208 (329)
T cd08298         134 AYPI-PEDYDDE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-  208 (329)
T ss_pred             EEEC-CCCCCHH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-
Confidence            5678 9999888 8889999999999999 889999999999997 699999999999999999999999999999997 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++....          .++++|+++++.+. ..+..++++++++|+++.+|....     .....+... +.+
T Consensus       209 ~~g~~~~~~~~~~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~  272 (329)
T cd08298         209 ELGADWAGDSDDL----------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWG  272 (329)
T ss_pred             HhCCcEEeccCcc----------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhC
Confidence            8998776665431          22379999998654 689999999999999999874321     111122222 345


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +..+.+.....     .+.++.++++++++.+++. ...++++++++|++.+.+++..||+|+
T Consensus       273 ~~~i~~~~~~~-----~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         273 EKTIRSVANLT-----RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             ceEEEEecCCC-----HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            55555544333     4668889999999998874 466799999999999999888889874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.87  E-value=9e-21  Score=150.59  Aligned_cols=199  Identities=25%  Similarity=0.382  Sum_probs=159.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. .++.+++.+.++++++....++.+|++|+|+|++|++|++++++++..|++|++++.++ +.+.++ 
T Consensus       110 ~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-  185 (309)
T cd05289         110 LALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-  185 (309)
T ss_pred             hccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-
Confidence            4577 8888887 78888899999999997777899999999999889999999999999999999988777 778887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|.+.+++.... ++..    ...+ ++|++++++++.....++++++++|+++.+|.....       ..   ..+.+
T Consensus       186 ~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-------~~---~~~~~  250 (309)
T cd05289         186 SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPA-------EQ---AAKRR  250 (309)
T ss_pred             HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcc-------hh---hhhhc
Confidence            8998777776654 4333    2333 899999999999899999999999999999864321       00   33445


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +..+........    ...+.+++++++++.+.+.+...++++++++|++.+..+...+|+++
T Consensus       251 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         251 GVRAGFVFVEPD----GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cceEEEEEeccc----HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            566555544321    56788999999999988777777899999999999998887778774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.87  E-value=6.8e-21  Score=152.16  Aligned_cols=206  Identities=28%  Similarity=0.366  Sum_probs=153.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |++++.. +++.+++++.+||+++....++++|++|+|+|++|++|++++++|+..|++|++++++ ++.+.++ 
T Consensus       109 ~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-  184 (319)
T cd08267         109 LAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-  184 (319)
T ss_pred             eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-
Confidence            4678 9998887 7889999999999999887889999999999998999999999999999999998865 7778887 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh--HHHHHHHccccCcEEEEEeeecccCCCcCCCccc--hHH
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE--MLD  156 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~  156 (228)
                      ++|.+++++.... ++.   ...+.+ ++|++++|+++.  .....+..++++|+++.+|......    .....  ...
T Consensus       185 ~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~  256 (319)
T cd08267         185 SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLT  256 (319)
T ss_pred             HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchh
Confidence            8998777776554 433   333444 899999999853  3334444599999999998754321    00100  001


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      .......+......  +.  .+.+..+++++.++++.+.+...++++++++|++.+.++...+|+++
T Consensus       257 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         257 LGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             hccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            11111222221111  11  57788999999999998877777899999999999998877778774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.87  E-value=1e-20  Score=148.48  Aligned_cols=202  Identities=24%  Similarity=0.270  Sum_probs=153.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. +++.+ +.++|||+++ ...++++|+++||+| .|++|++++++|+.+|++ |+++++++++.+.++
T Consensus        65 ~~~i-p~~l~~~-~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~  139 (277)
T cd08255          65 LVPL-PDGLPPE-RAALT-ALAATALNGV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE  139 (277)
T ss_pred             eeEC-cCCCCHH-HhHHH-HHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH
Confidence            4678 9888887 66666 7899999998 578999999999997 599999999999999998 999999999999888


Q ss_pred             HHhC-CCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLG-FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++| .+.+++...  .      ...++++|++||+++. ......+++++++|+++.+|.....      .......+.
T Consensus       140 -~~g~~~~~~~~~~--~------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~  204 (277)
T cd08255         140 -ALGPADPVAADTA--D------EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFH  204 (277)
T ss_pred             -HcCCCccccccch--h------hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHH
Confidence             888 444443321  1      1122389999999875 6888999999999999999875431      011123344


Q ss_pred             hhhceeeceecccc----h---hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcC-CCcceEEE
Q 027106          159 YKRIKFQGFLAADH----L---NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQG-GNIGKKVV  223 (228)
Q Consensus       159 ~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvl  223 (228)
                      .++.++.+......    .   ....+.++++++++.++.+++.+...++++++.+||+.+.++ ....|+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         205 FKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             hccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            45667766654432    0   112367889999999999888777778999999999999877 34567764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.86  E-value=1.7e-20  Score=130.92  Aligned_cols=128  Identities=26%  Similarity=0.458  Sum_probs=114.7

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcc-hhHHHHHHHc
Q 027106           50 SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVG-AEMQEAAIAN  127 (228)
Q Consensus        50 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g-~~~~~~~~~~  127 (228)
                      ++|++++|+|+..|++|+++++++++.++++ ++|+++++++++. ++.+++++.+++ ++|+||||+| .+.++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999887 899999999998 9999999999 6899999999


Q ss_pred             cccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHc
Q 027106          128 MNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS  189 (228)
Q Consensus       128 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (228)
                      ++++|+++.+|...+     ...+.+...++.+++++.+++.++     ++.++++++++.+
T Consensus        79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la~  130 (130)
T PF00107_consen   79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH-
T ss_pred             hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhcC
Confidence            999999999998762     244778899999999999999988     5667777776653

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.86  E-value=8.3e-20  Score=145.40  Aligned_cols=172  Identities=26%  Similarity=0.331  Sum_probs=142.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA--GSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~--~~~~~~~~~   79 (228)
                      ++++ |+++++. +++ ++..++++|+++...+++++|++|||.| +|++|.+++|+|+.+|++|+++.  +++++.+.+
T Consensus       131 ~~~l-p~~~~~~-~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~  206 (306)
T cd08258         131 LHEL-PENLSLE-AAA-LTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA  206 (306)
T ss_pred             eEEC-cCCCCHH-HHH-hhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH
Confidence            5678 9999888 554 7888899999998889999999999976 69999999999999999988763  355677777


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      + ++|++.+ +.... ++...+....++ ++|++||+.|+ ..+...+++++++|+++.+|...+.     ....+...+
T Consensus       207 ~-~~g~~~~-~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~  278 (306)
T cd08258         207 K-ELGADAV-NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERI  278 (306)
T ss_pred             H-HhCCccc-CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHH
Confidence            8 8999877 77665 777888777765 89999999975 6888999999999999999986521     234456777


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcC
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  190 (228)
                      +.+++++.|++.+.     ++.++++++++++|
T Consensus       279 ~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         279 IQKELSVIGSRSST-----PASWETALRLLASG  306 (306)
T ss_pred             hhcCcEEEEEecCc-----hHhHHHHHHHHhcC
Confidence            78999999999877     57788999988775

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.84  E-value=2.2e-19  Score=140.11  Aligned_cols=169  Identities=31%  Similarity=0.445  Sum_probs=137.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. +++.+++++.|||+++.....+.+|++|||+|+.+ +|++++++++..|.+|+++++++++.+.++ 
T Consensus       100 ~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-  175 (271)
T cd05188         100 LVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-  175 (271)
T ss_pred             eEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-
Confidence            5678 9999988 78888899999999998877789999999999855 999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      ++|.+.+++..+. +....+. ...+ ++|++++++++ .....++++++++|+++.+|......     ........+.
T Consensus       176 ~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~  248 (271)
T cd05188         176 ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP-----PLDDLRRLLF  248 (271)
T ss_pred             HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC-----CcccHHHHHh
Confidence            8898887877665 5555555 4444 89999999998 78899999999999999999765321     1222456678


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHH
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNH  186 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (228)
                      +++++.++....     ...++.++++
T Consensus       249 ~~~~~~~~~~~~-----~~~~~~~~~~  270 (271)
T cd05188         249 KELTIIGSTGGT-----REDFEEALDL  270 (271)
T ss_pred             cceEEEEeecCC-----HHHHHHHHhh
Confidence            899999988776     2345454443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.67  E-value=1.1e-16  Score=111.09  Aligned_cols=122  Identities=24%  Similarity=0.302  Sum_probs=80.7

Q ss_pred             hCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc--hhHH-HHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           83 LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG--AEMQ-EAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      +|+++++|+++. ++      ..+++||+|||++|  ++.+ ..++++| ++|+++.++. .          ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhh
Confidence            589999999865 66      22358999999999  6544 7777888 9999999873 0          01111111


Q ss_pred             hhceeeceecccc-h-hHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          160 KRIKFQGFLAADH-L-NLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       160 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      +...+.+...... + +..++.++.+.+++.+|+++|.+..+||++++.+|++.+++++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2222222222210 1 22457799999999999999999999999999999999999999999997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.57  E-value=1e-13  Score=112.84  Aligned_cols=176  Identities=11%  Similarity=0.064  Sum_probs=130.9

Q ss_pred             HHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHH
Q 027106           25 TAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        25 ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      ..+.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+.. ++.      .+.+  
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~~------~e~v--  255 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MTM------EEAV--  255 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-ccH------HHHH--
Confidence            34555544434 368999999995 99999999999999999999999999999998 888743 211      1122  


Q ss_pred             HCCCCccEEEcCcchh-HHHHH-HHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHH
Q 027106          104 YFPDGIDIYFDNVGAE-MQEAA-IANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIS  181 (228)
Q Consensus       104 ~~~~~~d~vld~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (228)
                         .+.|+|++|+|.. .+... ++.++++|+++.+|..        ...++...+..+++++.+...+..    ...++
T Consensus       256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~  320 (413)
T cd00401         256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP  320 (413)
T ss_pred             ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence               2589999999974 56655 9999999999999943        225777888888998888776531    11344


Q ss_pred             --HHHHHHHcCCC-cc--cccee-----cccC-cHHHHHHHhHcCCC-cceEEEEec
Q 027106          182 --TTCNHLRSGAI-YP--LEDIS-----DGVE-SIPSAFTGLFQGGN-IGKKVVRIT  226 (228)
Q Consensus       182 --~~~~~~~~g~i-~~--~~~~~-----~~~~-~~~~A~~~~~~~~~-~gkvvl~~~  226 (228)
                        ..+.++.+|++ ..  .+...     ++|+ |+.++++.+.++.. ..|+++.+.
T Consensus       321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence              68999999998 32  23333     4788 99999999987763 357877654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.57  E-value=7.7e-14  Score=116.30  Aligned_cols=150  Identities=14%  Similarity=0.109  Sum_probs=109.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccCh------------hhHHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEE------------TDLKAALK  102 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~~~  102 (228)
                      ..++++|+|.|+ |++|+++++.|+.+|++|++++.++++++.++ ++|++.+ ++..+.            .++.+..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            468999999996 99999999999999999999999999999999 8999754 444321            02222222


Q ss_pred             HH-CC--CCccEEEcCcchh------H-HHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh-hhceeeceeccc
Q 027106          103 RY-FP--DGIDIYFDNVGAE------M-QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY-KRIKFQGFLAAD  171 (228)
Q Consensus       103 ~~-~~--~~~d~vld~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  171 (228)
                      +. .+  +++|++|+|++.+      . .+.+++.++++|+++.+|...+.+.+   .+.+...++. +++++.|.....
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~P  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDLP  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCCc
Confidence            22 33  3799999999852      4 49999999999999999986544321   1222334454 788888876433


Q ss_pred             chhHHHHHHHHHHHHHHcCCCccc
Q 027106          172 HLNLYQDFISTTCNHLRSGAIYPL  195 (228)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~g~i~~~  195 (228)
                           .++.++..+++.++.+...
T Consensus       317 -----~~~p~~As~lla~~~i~l~  335 (509)
T PRK09424        317 -----SRLPTQSSQLYGTNLVNLL  335 (509)
T ss_pred             -----hhHHHHHHHHHHhCCccHH
Confidence                 3555568888888877543

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.97  E-value=1.2e-08  Score=79.96  Aligned_cols=171  Identities=15%  Similarity=0.174  Sum_probs=100.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      .+.+++|++||..|+ |+ |..+.++++..|.  +|++++.+++..+.+++.   +|...+ ..... ++.+ + .+.++
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence            356889999999994 66 8888888888775  799999999998888732   333322 11111 2211 1 12234


Q ss_pred             CccEEEcCc------c-hhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHH
Q 027106          108 GIDIYFDNV------G-AEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI  180 (228)
Q Consensus       108 ~~d~vld~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (228)
                      .||+|+...      . ...+..+.+.|+|||+++..+......       .+  ....+...+.+......     ...
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~-----~~~  211 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE-------LP--EEIRNDAELYAGCVAGA-----LQE  211 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC-------CC--HHHHHhHHHHhccccCC-----CCH
Confidence            799998543      1 248999999999999999987654221       11  11122222221111111     112


Q ss_pred             HHHHHHHHcCCCcc---ccceecccCcHHHHHHHh--HcCCCcceEEE
Q 027106          181 STTCNHLRSGAIYP---LEDISDGVESIPSAFTGL--FQGGNIGKKVV  223 (228)
Q Consensus       181 ~~~~~~~~~g~i~~---~~~~~~~~~~~~~A~~~~--~~~~~~gkvvl  223 (228)
                      +++.+++++..+..   .....+++++..++++.+  ..+...++.+.
T Consensus       212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence            34455555533332   233445889999999888  55444444443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.94  E-value=9.3e-09  Score=86.01  Aligned_cols=108  Identities=20%  Similarity=0.217  Sum_probs=82.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccCh------------hhHHHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEE------------TDLKAALKR  103 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~------------~~~~~~~~~  103 (228)
                      .++++|+|.|+ |.+|+++++.++.+|++|++++.++++++.++ ++|.+.+ ++..+.            +++.+...+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            45789999996 99999999999999999999999999999999 8998652 222110            133333333


Q ss_pred             HCC---CCccEEEcCc---ch--h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106          104 YFP---DGIDIYFDNV---GA--E--MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus       104 ~~~---~~~d~vld~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                      ...   .++|++|+|+   |.  +  ...+.++.+++|+.++.++...+++++
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E  292 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCE  292 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEE
Confidence            222   2799999999   53  2  677889999999999999987777653

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.78  E-value=5.1e-08  Score=73.13  Aligned_cols=106  Identities=24%  Similarity=0.355  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCC--CccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPD--GIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~--~~d~  111 (228)
                      +++.++|+||++|+|.+.++.....|++|+.+.|+.++++.+.++++.    ...+|..+..+....+......  .+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            457899999999999999999999999999999999999999888983    2345665543555555554443  6999


Q ss_pred             EEcCcchh-----------HHHH---------------HHHcc--ccCcEEEEEeeeccc
Q 027106          112 YFDNVGAE-----------MQEA---------------AIANM--NTYGRVAVCGVISEY  143 (228)
Q Consensus       112 vld~~g~~-----------~~~~---------------~~~~l--~~~G~~v~~g~~~~~  143 (228)
                      +++++|-.           .|..               .+..|  +..|.++.+|+..+.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~  144 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR  144 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc
Confidence            99998832           2222               22222  236899999987754

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.71  E-value=4.4e-07  Score=74.02  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=74.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc-
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-  117 (228)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++........+.+++.+.+.     .+|+||+|++ 
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence            456999995 999999999999999999999999888887764566432122222213333332     5899999973 


Q ss_pred             --h--h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106          118 --A--E--MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus       118 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                        .  +  .....++.+++++.++.++...+++++
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e  275 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVE  275 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCcc
Confidence              2  2  247788889999999999987776653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.63  E-value=2.5e-07  Score=67.48  Aligned_cols=79  Identities=15%  Similarity=0.338  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccCh---hhHHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKEE---TDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~---~~~~~~~~~~~~~~~d~v  112 (228)
                      .|.+|||+||++|+|+.+++-...+|-+|+++.|++++++.++.+...  ..+.|..+.   +.+.+.+.+..+ ..+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence            478999999999999999999999999999999999999998833322  344555543   124444444333 58999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++|+|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            99887

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.62  E-value=7.2e-07  Score=73.44  Aligned_cols=104  Identities=18%  Similarity=0.190  Sum_probs=77.8

Q ss_pred             HHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHH
Q 027106           24 LTAYAGLFEIGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALK  102 (228)
Q Consensus        24 ~ta~~~l~~~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  102 (228)
                      ...|.++.+..++. .|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|+. +.+      +.+.+ 
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~~------l~eal-  265 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VMT------MEEAA-  265 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ecC------HHHHH-
Confidence            34455554443554 8999999995 99999999999999999999998888776666 55653 221      11122 


Q ss_pred             HHCCCCccEEEcCcchh-HHH-HHHHccccCcEEEEEeeec
Q 027106          103 RYFPDGIDIYFDNVGAE-MQE-AAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       103 ~~~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  141 (228)
                          .++|+|++++|.. .+. ..+..+++++.++.+|...
T Consensus       266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                2589999999874 554 6789999999999998643

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.60  E-value=1.6e-06  Score=68.71  Aligned_cols=94  Identities=18%  Similarity=0.294  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|+|.|. |.+|+.+++.++.+|++|+++++++++.+.++ ++|...+ ...   +..+.+.     ++|+||++++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~~---~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HLS---ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cHH---HHHHHhC-----CCCEEEECCC
Confidence            6899999995 99999999999999999999999988888887 7886432 111   2222222     5899999988


Q ss_pred             hh-HHHHHHHccccCcEEEEEeeecc
Q 027106          118 AE-MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       118 ~~-~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      .. .....++.+++++.++.++..++
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence            65 44667788999999999887654

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.56  E-value=1.6e-06  Score=71.03  Aligned_cols=101  Identities=20%  Similarity=0.233  Sum_probs=75.3

Q ss_pred             HHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106           26 AYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        26 a~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      ++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...++ ..|+. +.+      ..+.+   
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------leeal---  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VMT------MEEAA---  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eCC------HHHHH---
Confidence            3444434333 468999999995 99999999999999999999998888776666 66652 221      11122   


Q ss_pred             CCCCccEEEcCcchh-HHH-HHHHccccCcEEEEEeee
Q 027106          105 FPDGIDIYFDNVGAE-MQE-AAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       105 ~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~  140 (228)
                        .+.|++|+++|.. .+. ..+..+++++.++.+|..
T Consensus       249 --~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       249 --KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             --hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence              2479999999874 454 488999999999999864

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.52  E-value=9.6e-07  Score=67.97  Aligned_cols=82  Identities=20%  Similarity=0.306  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ce--eeccChhhHHHHHH-HHCC-
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-----DA--FNYKEETDLKAALK-RYFP-  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-----~~--~~~~~~~~~~~~~~-~~~~-  106 (228)
                      ...+.+++|+||++|+|...+..+...|.+++.+.|++++++.+.+++.-.     .+  +|.++. +-...+. ++.. 
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhc
Confidence            356789999999999999999998999999999999999998887655431     12  345554 3333333 2222 


Q ss_pred             C-CccEEEcCcch
Q 027106          107 D-GIDIYFDNVGA  118 (228)
Q Consensus       107 ~-~~d~vld~~g~  118 (228)
                      + .+|+++|++|-
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence            2 79999999983

>PLN02494 adenosylhomocysteinase

Probab=98.50  E-value=2.4e-06  Score=70.69  Aligned_cols=101  Identities=17%  Similarity=0.196  Sum_probs=77.0

Q ss_pred             HHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106           26 AYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        26 a~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      .+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+. ..|... +      +..+.+.  
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~--  308 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS--  308 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh--
Confidence            35555444444 67999999995 99999999999999999999998887766666 666642 2      1122222  


Q ss_pred             CCCCccEEEcCcchh--HHHHHHHccccCcEEEEEeee
Q 027106          105 FPDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       105 ~~~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~  140 (228)
                         ..|+++++.|..  .....++.|++++.++.+|..
T Consensus       309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence               379999999975  348899999999999999873

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.45  E-value=2.4e-06  Score=65.46  Aligned_cols=104  Identities=18%  Similarity=0.192  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCce--eeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FDDA--FNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~~--~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      ++++|||+|++|++|..+++.+...|++|+++++++++.+.+.+++.   ....  .|..+.+...+.+.+..  -+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999887766632332   1121  23333323333333221  13689


Q ss_pred             EEEcCcchh------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          111 IYFDNVGAE------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       111 ~vld~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .++.+.+..                        .++..++.++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            998887631                        2445566777789999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.45  E-value=3.8e-06  Score=65.84  Aligned_cols=77  Identities=22%  Similarity=0.365  Sum_probs=57.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCC--CCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFP--DGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~--~~~d~vld~~  116 (228)
                      +++||+||+|++|..+++.+...|++|++++++.++.+.+. ..+...+ .|..+.+.+.+.+.....  +++|++++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999998889999999999888777666 5454332 455554344444443322  3799999998


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PRK08324 short chain dehydrogenase; Validated

Probab=98.44  E-value=2.4e-06  Score=75.45  Aligned_cols=104  Identities=22%  Similarity=0.282  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----CceeeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-----DDAFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+.++.     ....|..+.......+.+..  .+++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            678999999999999999999999999999999998887766545543     11234444323333333322  24799


Q ss_pred             EEEcCcch--------------------------hHHHHHHHcccc---CcEEEEEeeec
Q 027106          111 IYFDNVGA--------------------------EMQEAAIANMNT---YGRVAVCGVIS  141 (228)
Q Consensus       111 ~vld~~g~--------------------------~~~~~~~~~l~~---~G~~v~~g~~~  141 (228)
                      ++|+++|.                          ..++.+++.+++   +|+++.+++..
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence            99999982                          123444566655   68999988754

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.43  E-value=5.5e-06  Score=65.12  Aligned_cols=104  Identities=19%  Similarity=0.337  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHH---HCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKR---YFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~---~~~~~~d~vl  113 (228)
                      .+++|+|+||+|++|..+++.+...|++|+++++++++.+.+. ..+...+ .|..+.+++...+.+   ...+.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4679999999999999999988889999999999988887776 5554332 355544233333333   2334799999


Q ss_pred             cCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106          114 DNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       114 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      +++|..                          ..+.+++.+..  .|+++.+++..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~  138 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG  138 (277)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence            987621                          02345555543  478999876543

>PRK12742 oxidoreductase; Provisional

Probab=98.43  E-value=5.1e-06  Score=63.57  Aligned_cols=103  Identities=20%  Similarity=0.249  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      ++++|||+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++.+...+ .|..+...+.+.+.+.  +++|+++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4789999999999999999998889999887754 45555555435565332 3444432333333321  369999998


Q ss_pred             cchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          116 VGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       116 ~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|..           .+               ..+.+.++.+|+++.++...+
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            8631           01               233455666789999886543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.43  E-value=1.5e-06  Score=69.46  Aligned_cols=105  Identities=24%  Similarity=0.216  Sum_probs=70.4

Q ss_pred             ccCCCCCCCcchhhhccchhHHHHHHHHHHhcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 027106            3 RKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK---PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTL   78 (228)
Q Consensus         3 ~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~   78 (228)
                      +++ |+.+..+  .+....+..+++.++.....   --++.+|+|.|+ |.+|..+++.++..|+ +|+++++++++.+.
T Consensus       142 ~~~-~k~vr~e--t~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         142 IKV-GKRVRTE--TGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHH-HHHHhhh--cCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            345 6666666  33334455666666633222   147899999995 9999999999998776 89999999887655


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM  120 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  120 (228)
                      +.+++|.. +.+.+   +..+.+.     ..|+||.|++.+.
T Consensus       218 la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~  250 (311)
T cd05213         218 LAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPH  250 (311)
T ss_pred             HHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCc
Confidence            54488873 33221   3333332     4799999999753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.39  E-value=4.6e-06  Score=61.65  Aligned_cols=109  Identities=19%  Similarity=0.233  Sum_probs=77.2

Q ss_pred             cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceee-ccCh
Q 027106           19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEE   94 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~   94 (228)
                      +..+...|. ++ +...+++|++||=+|  +|.|..++-+|+..+ +|+.+.+.++=.+.+++   .+|...+.. ..+.
T Consensus        55 is~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG  129 (209)
T COG2518          55 ISAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG  129 (209)
T ss_pred             ecCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc
Confidence            334444444 33 678899999999999  788999999999888 99999988774444432   677754322 2222


Q ss_pred             hhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEe
Q 027106           95 TDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        95 ~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g  138 (228)
                            ...+.+. +||.|+-+++.+ .-+..++.|++||+++.--
T Consensus       130 ------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         130 ------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             ------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence                  1222333 899998877764 5577789999999999943

>PRK06182 short chain dehydrogenase; Validated

Probab=98.38  E-value=5.4e-06  Score=64.99  Aligned_cols=79  Identities=25%  Similarity=0.406  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      ++++++|+|++|++|..+++.+...|++|+++++++++++.+. ..+... ..|..+.+++...+.+..  .+++|++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4679999999999999999998889999999999988776655 444432 245555434444444332  237999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.36  E-value=3.5e-06  Score=65.44  Aligned_cols=106  Identities=21%  Similarity=0.314  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc-e----eeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD-A----FNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-~----~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|+.|+|+||++|+|.+.+.-....|++++.+.+..++++.+.+   +.+... +    .|.++.++....+.+..  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            67899999999999998887777889999888888777766622   333322 2    34454434444443322  24


Q ss_pred             CccEEEcCcchh-----------H---------------HHHHHHcccc-C-cEEEEEeeeccc
Q 027106          108 GIDIYFDNVGAE-----------M---------------QEAAIANMNT-Y-GRVAVCGVISEY  143 (228)
Q Consensus       108 ~~d~vld~~g~~-----------~---------------~~~~~~~l~~-~-G~~v~~g~~~~~  143 (228)
                      ++|++++++|-.           .               ...+++.|++ + |++|.+++..|.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            899999988731           1               1345666765 3 999999987764

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.35  E-value=8e-06  Score=63.61  Aligned_cols=104  Identities=16%  Similarity=0.186  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      ++++++|+||++++|..+++.+...|++|++++++.++.+.+.++++.. .  ..|..+.+++.+.+.+...  +.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4689999999999999999998889999999999887766665455532 1  2344444244443333221  368999


Q ss_pred             EcCcchh-------------------------HHHHHHHcc-ccCcEEEEEeeec
Q 027106          113 FDNVGAE-------------------------MQEAAIANM-NTYGRVAVCGVIS  141 (228)
Q Consensus       113 ld~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~  141 (228)
                      ++++|..                         ..+.+++.+ +++|+++.++...
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            9987631                         112233444 5678999988654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.32  E-value=6.5e-06  Score=57.50  Aligned_cols=94  Identities=22%  Similarity=0.288  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      -++.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++...  .+..+   +..+.+.     .+|+|+
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVI   80 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEE
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEE
Confidence            36889999996 9999999999999999 69999999999888876774432  33443   3222222     489999


Q ss_pred             cCcchh---HHHHHHHccccC-cEEEEEee
Q 027106          114 DNVGAE---MQEAAIANMNTY-GRVAVCGV  139 (228)
Q Consensus       114 d~~g~~---~~~~~~~~l~~~-G~~v~~g~  139 (228)
                      +|++..   .-...+....+. +.++.++.
T Consensus        81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   81 NATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             E-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             EecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            998864   222333333221 46666664

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=98.30  E-value=5.9e-06  Score=55.56  Aligned_cols=95  Identities=20%  Similarity=0.284  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~-~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ||.+||-.|  .|.|..++.+++ ..+++|++++.+++..+.+++..   +...-+..... ++  .......++||+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence            688999999  566888888888 47889999999999999988555   33221221111 33  11111123799998


Q ss_pred             cCc-ch----h------HHHHHHHccccCcEEEEE
Q 027106          114 DNV-GA----E------MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       114 d~~-g~----~------~~~~~~~~l~~~G~~v~~  137 (228)
                      ... ..    .      .++.+.+.|+|+|+++.-
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            866 21    1      378889999999999874

...

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.28  E-value=1.5e-05  Score=62.11  Aligned_cols=105  Identities=21%  Similarity=0.344  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC---ceeeccChhhHHHHHHHHCC-CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD---DAFNYKEETDLKAALKRYFP-DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~~-~~~  109 (228)
                      +|+++||+||++++|.++++.+...|++|+++++++++.+.+.+++    +..   ...|..+.++....+.+... +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            5789999999999999999999999999999999887766554333    321   12344444233333333322 479


Q ss_pred             cEEEcCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106          110 DIYFDNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      |++++++|..                          ..+.+++.+..  .|+++.++....
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~  147 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI  147 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence            9999988631                          12344555543  489999887543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.27  E-value=3.3e-05  Score=60.92  Aligned_cols=112  Identities=17%  Similarity=0.175  Sum_probs=78.0

Q ss_pred             chhHHHHHHHHHHhc---CC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChh
Q 027106           20 GFSGLTAYAGLFEIG---KP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEET   95 (228)
Q Consensus        20 ~~~~~ta~~~l~~~~---~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   95 (228)
                      .....+|..++....   .+ -.|++|+|.|. |.+|.++++.++..|++|+++++++++.+.+. +.|... +...   
T Consensus       128 ~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~-~~~~---  201 (287)
T TIGR02853       128 YNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIP-FPLN---  201 (287)
T ss_pred             EccHhHHHHHHHHHHHhcCCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCee-ecHH---
Confidence            445556655553222   11 25889999995 99999999999999999999999988877766 666532 2111   


Q ss_pred             hHHHHHHHHCCCCccEEEcCcchhH-HHHHHHccccCcEEEEEeeecc
Q 027106           96 DLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus        96 ~~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++.+.+     .+.|+|+++++... -...++.++++..++.++..++
T Consensus       202 ~l~~~l-----~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg  244 (287)
T TIGR02853       202 KLEEKV-----AEIDIVINTIPALVLTADVLSKLPKHAVIIDLASKPG  244 (287)
T ss_pred             HHHHHh-----ccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence            222222     25899999987653 2456778889888888886553

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.27  E-value=8.1e-06  Score=64.85  Aligned_cols=81  Identities=21%  Similarity=0.286  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--e--eeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--A--FNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~--~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +|+++||+||+|++|..+++.+...|++|++++++.++.+.+.++++.. .  .  .|..+.++....+.+...  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999988877665466531 1  1  455544233333333222  3699


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      ++++++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999883

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.25  E-value=9.6e-06  Score=67.56  Aligned_cols=89  Identities=26%  Similarity=0.280  Sum_probs=62.4

Q ss_pred             hhHHHHHHHHHHhcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           21 FSGLTAYAGLFEIGK---PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        21 ~~~~ta~~~l~~~~~---~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      .+..+++.++.....   -.+|++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+++|.. +++..   +
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~  235 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---E  235 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---H
Confidence            355566666633222   367899999995 9999999999999998 8999999988876444377753 33221   3


Q ss_pred             HHHHHHHHCCCCccEEEcCcchh
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      ..+.+     .++|+||+|++.+
T Consensus       236 ~~~~l-----~~aDvVI~aT~s~  253 (423)
T PRK00045        236 LPEAL-----AEADIVISSTGAP  253 (423)
T ss_pred             HHHHh-----ccCCEEEECCCCC
Confidence            32222     2589999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.23  E-value=2.3e-05  Score=63.35  Aligned_cols=105  Identities=22%  Similarity=0.210  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++....+.+...  +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            567999999999999999999888999999999988776654422   34322   2355544233333332221  369


Q ss_pred             cEEEcCcchh--------------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106          110 DIYFDNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      |++++++|..                          ....+++.+.+  .|++|.+++..+
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            9999988731                          11234455544  589999887543

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=98.20  E-value=3e-05  Score=63.70  Aligned_cols=113  Identities=18%  Similarity=0.132  Sum_probs=79.6

Q ss_pred             hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      .+|..+....+..+....++++|++||-.|  .|.|..+..+++..|++|++++.+++..+.+++.. ...-+..... +
T Consensus       146 ~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D  221 (383)
T PRK11705        146 DTLEEAQEAKLDLICRKLQLKPGMRVLDIG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-D  221 (383)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-c
Confidence            344455556666676778899999999999  46788888999988999999999999999998433 2111222111 3


Q ss_pred             HHHHHHHHCCCCccEEEcC-----cch----hHHHHHHHccccCcEEEEEe
Q 027106           97 LKAALKRYFPDGIDIYFDN-----VGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~-----~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.    +. .+.||.|+..     ++.    ..++.+.+.|+|+|.++...
T Consensus       222 ~~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        222 YR----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hh----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            22    11 3479988743     332    36788889999999998854

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.18  E-value=2.8e-05  Score=64.67  Aligned_cols=99  Identities=21%  Similarity=0.257  Sum_probs=73.1

Q ss_pred             HHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC
Q 027106           28 AGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        28 ~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ..+.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|+.. .      ++.+.+.    
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~-~------~leell~----  308 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQV-V------TLEDVVE----  308 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCcee-c------cHHHHHh----
Confidence            4443333 3458999999995 99999999999999999999988777655555 456432 1      2222222    


Q ss_pred             CCccEEEcCcchh-HH-HHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDNVGAE-MQ-EAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~~g~~-~~-~~~~~~l~~~G~~v~~g~~  140 (228)
                       ..|+|+.++|.. .+ ...++.|++++.++.+|..
T Consensus       309 -~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        309 -TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             -cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence             489999998874 44 4789999999999999864

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.18  E-value=3.9e-05  Score=59.08  Aligned_cols=80  Identities=15%  Similarity=0.178  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHC--CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+....  .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999988776665554566422   123333323322222221  1368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        85 i~~ag   89 (249)
T PRK06500         85 FINAG   89 (249)
T ss_pred             EECCC
Confidence            99886

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.17  E-value=1.5e-05  Score=62.03  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +++++||+||++++|..+++.+...|++|+++++++++.+.+.++++.. .  ..|..+.++....+.+...  +.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999998889999999999988877776455431 1  1344443234333433322  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99887

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.16  E-value=3.5e-05  Score=59.91  Aligned_cols=83  Identities=16%  Similarity=0.252  Sum_probs=56.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHHC--CCCc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .-++.++||+||+|++|..+++.+...|++|+++.++++..+.+.++....    ...|..+.+.....+.+..  -+++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            357789999999999999999998889999999998877766655333322    1234444323333332221  1369


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+|+.++|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999988763

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.16  E-value=4.8e-05  Score=64.06  Aligned_cols=105  Identities=19%  Similarity=0.257  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS--KEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~  111 (228)
                      .+|+++||+|++|++|..+++.+...|++|++++++  .+..+.+.++++... .+|..+.+.....+....  .+++|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            357899999999999999999999999999998863  233333332555432 245555423333333222  236999


Q ss_pred             EEcCcch-----------hHHHHHHH-----------------ccccCcEEEEEeeec
Q 027106          112 YFDNVGA-----------EMQEAAIA-----------------NMNTYGRVAVCGVIS  141 (228)
Q Consensus       112 vld~~g~-----------~~~~~~~~-----------------~l~~~G~~v~~g~~~  141 (228)
                      +|+++|.           +.++..++                 .++++|+++.++...
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~  345 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSIS  345 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChh
Confidence            9999872           12332222                 455679999988644

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.16  E-value=1.8e-05  Score=61.32  Aligned_cols=80  Identities=19%  Similarity=0.200  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      +|++|+|+||+|++|..+++.+...|++|+++++++.+.+...++++... ..|..+.+.+...+.+..  .+++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57899999999999999999998899999999998877665543554422 235555423333333321  136899999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        86 ~ag   88 (255)
T PRK06057         86 NAG   88 (255)
T ss_pred             CCC
Confidence            876

>PRK06484 short chain dehydrogenase; Validated

Probab=98.16  E-value=2.6e-05  Score=66.88  Aligned_cols=105  Identities=18%  Similarity=0.229  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|...++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999888877764565422   2355544344444433322  469999


Q ss_pred             EcCcchh------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106          113 FDNVGAE------------M---------------QEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|..            .               .+.++..++.+|+++.++...+
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9988731            1               2333456666799999887553

>PRK09186 flagellin modification protein A; Provisional

Probab=98.15  E-value=4.5e-05  Score=59.02  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ++.+|||+||+|++|...+..+...|++|+++++++++.+.+.+++    +...    ..|..+.+.+...+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999988889999999998887765554333    2211    2354444234343433221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|+++++++
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999875

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.14  E-value=4.5e-05  Score=59.89  Aligned_cols=104  Identities=15%  Similarity=0.173  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||+  +|+|.++++.+...|++|+++.++.   ++.+.+.++++...  .+|..+.++....+.+...  ++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999986  7999999998888999999988774   23333332455322  2455554344444443322  47


Q ss_pred             ccEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|++++++|..                              ..+.+++.+..+|+++.++...
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            99999988731                              1133556777789999987654

>PRK06484 short chain dehydrogenase; Validated

Probab=98.12  E-value=4.2e-05  Score=65.55  Aligned_cols=81  Identities=25%  Similarity=0.376  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+|+++++|.++++.+...|++|+.++++.++.+.+.++++...   .+|..+.+++...+.+...  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899999999999999999999999999999998888776664666422   2454444344444433322  369999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      ++++|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            998763

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=98.11  E-value=1.8e-05  Score=61.84  Aligned_cols=104  Identities=22%  Similarity=0.303  Sum_probs=65.3

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHH
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      +..+.+..++++|++||-+|  .|-|-.+..+|+..|++|++++.++++.+.++++   .|....+..... ++.    +
T Consensus        51 ~~~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~  123 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----D  123 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G
T ss_pred             HHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----c
Confidence            34455678999999999999  5588888999999999999999999998887643   444222221111 221    1


Q ss_pred             HCCCCccEEEc-----Ccch----hHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFD-----NVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld-----~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      + ++.||.|+.     .+|.    ..++.+.++|+|||+++.-.
T Consensus       124 ~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  124 L-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             c-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence            1 126898754     4443    26888889999999998643

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.11  E-value=4.6e-05  Score=58.28  Aligned_cols=80  Identities=19%  Similarity=0.306  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cce--eeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---DDA--FNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~--~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..   .+.  .|..+..++.+.+.....  +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999988888899999999988776655434432   111  233433244443433221  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++|++.|
T Consensus        85 ~vi~~ag   91 (237)
T PRK07326         85 VLIANAG   91 (237)
T ss_pred             EEEECCC
Confidence            9998876

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.11  E-value=1.7e-05  Score=63.91  Aligned_cols=80  Identities=23%  Similarity=0.341  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++++|||+||++++|.++++.+...|++|+++++++++++.+.+   +.|...   ..|..+.++....+.+..  .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999999888765542   234422   235544423333222221  2479


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        86 D~lVnnAG   93 (330)
T PRK06139         86 DVWVNNVG   93 (330)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.11  E-value=6.3e-05  Score=57.97  Aligned_cols=103  Identities=18%  Similarity=0.197  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +++++||+||+|++|..+++.+...|.+|+++.++.+ +.+.+.++   .+.. .  ..|..+.++....+.+...  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999988889999999887643 33333212   2321 1  1344444233333333222  36


Q ss_pred             ccEEEcCcchh--------------------HHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVGAE--------------------MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +|+++.+++..                    .++.+.+.+..+|+++.+++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            89988877531                    334455555667899988763

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.11  E-value=5.8e-05  Score=55.68  Aligned_cols=105  Identities=16%  Similarity=0.293  Sum_probs=73.9

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhh---HHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSAA-SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETD---LKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga-~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~---~~~~~~~~~~~~~d~v  112 (228)
                      ....|||+|+ .||+|.+++.-....|+.|+++.++.++-..+..++|. ..-+|..++++   +...++..+.|+.|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3468999985 78899999988889999999999988766655547776 23355554423   4445566666799999


Q ss_pred             EcCcchh-----------HHHH----------------HHHccccCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------MQEA----------------AIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~~~~----------------~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|.+           .++.                ..-+.+..|++|.+|+..+
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~  142 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG  142 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence            9987743           1111                1224567899999998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.11  E-value=2.3e-05  Score=61.37  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCc-eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FDD-AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      .|.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+.+++...+.....  +++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            36799999999999999998888889999999999888766553555 221 2355544343333333221  4799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        84 ~~ag   87 (273)
T PRK07825         84 NNAG   87 (273)
T ss_pred             ECCC
Confidence            9887

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.11  E-value=2.2e-05  Score=61.17  Aligned_cols=80  Identities=24%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+..+.. .  ..|..+..+..+.+.+...  +.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999988889999999999888777666333321 1  1344443233333333222  368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.10  E-value=4.5e-05  Score=59.28  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=55.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHH---CCCCccEE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRY---FPDGIDIY  112 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~---~~~~~d~v  112 (228)
                      +++||+||+|++|..+++.+...|++|++++++.++.+.+.+..+..    ..+|..+..++.+.+...   ..+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            47999999999999999988889999999999988877665344311    123555442444333332   13479999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      +.++|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            998874

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.09  E-value=4.1e-05  Score=58.81  Aligned_cols=78  Identities=22%  Similarity=0.342  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+... ..|..+.......+..  .+++|++|+++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            57899999999999999999999999999999998887766653455432 2344443222232222  23699999988


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        86 g   86 (245)
T PRK07060         86 G   86 (245)
T ss_pred             C
Confidence            7

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.08  E-value=6.1e-05  Score=64.26  Aligned_cols=105  Identities=13%  Similarity=0.178  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CC-----Cc--eeeccChhh
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--------GF-----DD--AFNYKEETD   96 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~-----~~--~~~~~~~~~   96 (228)
                      ...+.+.|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+.+        |.     ..  ..|..+.  
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~--  150 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP--  150 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH--
Confidence            3455678999999999999999999988889999999999988775543221        21     01  1233332  


Q ss_pred             HHHHHHHHCCCCccEEEcCcchh----------------HHHHHHHcccc--CcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAE----------------MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~----------------~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                        +.+.+.. +++|+||+++|..                ....+++.+..  .|+||.++...
T Consensus       151 --esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        151 --DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             --HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence              1222222 3699999998742                11223344433  36999988754

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.08  E-value=5.1e-05  Score=58.45  Aligned_cols=81  Identities=19%  Similarity=0.249  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++   +.. .  ..|..+.++....+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998887665543232   221 1  2244443233333322211  379


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.08  E-value=6.9e-05  Score=58.06  Aligned_cols=104  Identities=15%  Similarity=0.128  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|++++|+||+  +++|.++++.+...|++|+++.++++..+.++ ++....    .+|..+.++..+.+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999888889999999987744333344 332211    1344443233333333222  469


Q ss_pred             cEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          110 DIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      |++++++|..                              ..+.+++.++.+|+++.++...+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            9999987621                              11334566667799988876543

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.08  E-value=7.7e-05  Score=56.95  Aligned_cols=80  Identities=11%  Similarity=0.143  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeeccChhhHHHHHHHHCC--CCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      ++.++||+|++|++|..+++.+...|++|+++++++++.+...++   .+... ..|..+.++....+.+...  +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            478999999999999999998888899999999877654322212   22221 1343333233333332221  37999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      |++++|
T Consensus        86 vi~~ag   91 (239)
T PRK12828         86 LVNIAG   91 (239)
T ss_pred             EEECCc
Confidence            999876

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=98.06  E-value=7e-05  Score=58.35  Aligned_cols=105  Identities=17%  Similarity=0.142  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .++ +|.|.|+ |.+|.-++.+|..+|++|...+.+.+|+..+.+.++-.--.-++....+.+.+.     +.|++|.++
T Consensus       167 ~~~-kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaV  239 (371)
T COG0686         167 LPA-KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAV  239 (371)
T ss_pred             CCc-cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEE
Confidence            444 5667785 999999999999999999999999999999986666542222333325555544     378888754


Q ss_pred             --ch---h--HHHHHHHccccCcEEEEEeeecccCCCcC
Q 027106          117 --GA---E--MQEAAIANMNTYGRVAVCGVISEYTDGKK  148 (228)
Q Consensus       117 --g~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  148 (228)
                        ++   +  ..++.++.|+||+.++.+....++.++..
T Consensus       240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGGc~Et~  278 (371)
T COG0686         240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGGCFETS  278 (371)
T ss_pred             EecCCCCceehhHHHHHhcCCCcEEEEEEEcCCCceecc
Confidence              22   1  67788999999999999998877766443

>PRK08017 oxidoreductase; Provisional

Probab=98.05  E-value=3.4e-05  Score=59.74  Aligned_cols=77  Identities=17%  Similarity=0.311  Sum_probs=56.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHH---HHHHHHCCCCccEEEcC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLK---AALKRYFPDGIDIYFDN  115 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~---~~~~~~~~~~~d~vld~  115 (228)
                      ++++|+||+|++|..+++.+...|++|++++++.++.+.++ ..+...+ .|..+.+...   +.+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            58999999999999999999989999999999998887777 6665432 3444432322   23333333468888887


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.05  E-value=3e-05  Score=60.51  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+...+++   +.. .  .+|..+.+++...+.+...  +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998877654443232   221 1  2344444244444443321  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998775

>PRK06196 oxidoreductase; Provisional

Probab=98.05  E-value=3.9e-05  Score=61.47  Aligned_cols=80  Identities=16%  Similarity=0.251  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CC-ceeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FD-DAFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      .|.+|+|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+.+++...+.+...  +++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            57899999999999999998888899999999998877665542332 21 12344444344444443322  4799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9887

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=98.05  E-value=9.9e-05  Score=57.37  Aligned_cols=112  Identities=19%  Similarity=0.258  Sum_probs=79.7

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHH
Q 027106           22 SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLK   98 (228)
Q Consensus        22 ~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~   98 (228)
                      +-..++..+.+..++++|++||=+|  .|-|-+++-+|+..|++|++++-|+++.+.+++   +.|...-+...-. ++.
T Consensus        56 AQ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~r  132 (283)
T COG2230          56 AQRAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYR  132 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-ccc
Confidence            3445666676889999999999999  678999999999999999999999999888874   2444311111100 111


Q ss_pred             HHHHHHCCCCccEEE-----cCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106           99 AALKRYFPDGIDIYF-----DNVGA----EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        99 ~~~~~~~~~~~d~vl-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                          .+ .+.||.|+     +.+|.    ..+..+.++|+++|++++-....
T Consensus       133 ----d~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         133 ----DF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             ----cc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence                11 12478775     34553    37788889999999999977654

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.04  E-value=9.9e-05  Score=57.80  Aligned_cols=78  Identities=14%  Similarity=0.216  Sum_probs=52.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--c--eeeccChhhHHHHHHHHC--CCCccE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD--D--AFNYKEETDLKAALKRYF--PDGIDI  111 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~--~~~~~~~~~~~~~~~~~~--~~~~d~  111 (228)
                      +++|+||+|++|..+++.+...|++|+++.+++++.+.+.++   .+..  .  ..|..+.++....+.+..  .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999998888999999999887765544322   2322  1  245555423333333321  136999


Q ss_pred             EEcCcch
Q 027106          112 YFDNVGA  118 (228)
Q Consensus       112 vld~~g~  118 (228)
                      +++++|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9998873

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.04  E-value=3.6e-05  Score=59.95  Aligned_cols=80  Identities=19%  Similarity=0.222  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|++++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    +...    ..|..+.++....+.+..  -+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999887765544222    1111    234444423333333322  14


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        87 ~id~li~~Ag   96 (265)
T PRK07062         87 GVDMLVNNAG   96 (265)
T ss_pred             CCCEEEECCC
Confidence            6999999987

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.03  E-value=4.9e-05  Score=61.08  Aligned_cols=80  Identities=15%  Similarity=0.214  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccC-hhhHHHHHHHHCCC-
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKE-ETDLKAALKRYFPD-  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~-~~~~~~~~~~~~~~-  107 (228)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    +...    .+|..+ ..+..+.+.+..++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            5899999999999999988888788999999999998876654332    2111    234332 11333444444444 


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      .+|++++++|
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            5779998876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.03  E-value=0.00012  Score=56.91  Aligned_cols=79  Identities=25%  Similarity=0.256  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +++++||+||+|++|.++++.+...|++|+++++++...+... ++   +..   ...|..+.++....+.+...  +++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988889999999998754323322 32   322   12354443233333333221  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999886

>PRK07063 short chain dehydrogenase; Provisional

Probab=98.03  E-value=3.4e-05  Score=59.97  Aligned_cols=80  Identities=15%  Similarity=0.173  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC---ceeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD---DAFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++     +..   ...|..+.+++...+.+...  +
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999988889999999999887766554333     211   11244443234333333221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            6999999887

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=98.02  E-value=0.00015  Score=54.16  Aligned_cols=100  Identities=19%  Similarity=0.290  Sum_probs=69.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCC-CceeeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGF-DDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~-~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ...++.++++||..|+ |. |..++.+++..+  .+|++++.+++..+.+++   .+|. +.+.... . +..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence            4568899999999994 55 888899988764  489999999998887653   3552 3322221 1 33222222 2


Q ss_pred             CCCccEEEcCcch----hHHHHHHHccccCcEEEE
Q 027106          106 PDGIDIYFDNVGA----EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       106 ~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~  136 (228)
                      .+.+|.|+...+.    ..+..+.+.|+++|+++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            2479999975542    377888899999999986

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.01  E-value=4.1e-05  Score=61.35  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++    +...    .+|..+.++....+.+..  .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999888889999999999887765544232    1111    134444423333333332  23


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        93 ~iD~li~nAG  102 (313)
T PRK05854         93 PIHLLINNAG  102 (313)
T ss_pred             CccEEEECCc
Confidence            7999999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=98.01  E-value=3.7e-05  Score=59.50  Aligned_cols=80  Identities=23%  Similarity=0.306  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+|+++++|..+++.+...|++|++++++.++.+.+.+++   +..   ...|..+.++..+.+.+...  +++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999998889999999999887766554333   221   12344443234333333221  479


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.01  E-value=4.4e-05  Score=58.00  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ++|+|+|++|++|...++.+...|++|+++++++++.+.++ +++...  ..|..+.+++.+.+.....+++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47999999999999999888888999999998877666555 443222  234444424444444443347999998875

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.00  E-value=3.6e-05  Score=61.04  Aligned_cols=81  Identities=21%  Similarity=0.356  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.++....+....  -+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999999999999988888999999999988766554332   321 1  134444323333333221  1369


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.99  E-value=5e-05  Score=59.67  Aligned_cols=81  Identities=17%  Similarity=0.171  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.+..+...   ..|..+.+.....+.+...  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46789999999999999999888889999999999887766652332211   2344443233333333221  368999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      ++++|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.98  E-value=6.7e-05  Score=58.39  Aligned_cols=82  Identities=24%  Similarity=0.328  Sum_probs=55.7

Q ss_pred             CCCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCce----eeccChhhHHHHHHHHC-
Q 027106           36 PKKGEKVFVSAASG-SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDDA----FNYKEETDLKAALKRYF-  105 (228)
Q Consensus        36 ~~~g~~VlI~ga~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~~----~~~~~~~~~~~~~~~~~-  105 (228)
                      +.+++++||+||+| ++|.++++.+...|++|+++++++++.+...++    +|...+    .|..+.++....+.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45678999999986 899999999999999999999887766554322    343222    24444323333333221 


Q ss_pred             -CCCccEEEcCcc
Q 027106          106 -PDGIDIYFDNVG  117 (228)
Q Consensus       106 -~~~~d~vld~~g  117 (228)
                       .+++|++++++|
T Consensus        94 ~~g~id~li~~ag  106 (262)
T PRK07831         94 RLGRLDVLVNNAG  106 (262)
T ss_pred             HcCCCCEEEECCC
Confidence             147899999987

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.98  E-value=5.1e-05  Score=59.13  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+.+.....+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999887765554232   221 1  1344444233333332211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.98  E-value=3.9e-05  Score=59.54  Aligned_cols=80  Identities=19%  Similarity=0.260  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCC--CceeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV----TLLKDKLGF--DDAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~----~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      -+|+.|||+||.+|+|.+.++-....|+++++++.+.+..    +.++ +.|-  ..+.|.++.++......+..+  |.
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999988877777899998888765533    3344 3342  345566655454444443333  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|+++|++|
T Consensus       115 V~ILVNNAG  123 (300)
T KOG1201|consen  115 VDILVNNAG  123 (300)
T ss_pred             ceEEEeccc
Confidence            999999988

>PRK06128 oxidoreductase; Provisional

Probab=97.98  E-value=0.00011  Score=58.49  Aligned_cols=104  Identities=19%  Similarity=0.274  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHHhCCCc---eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVT----LLKDKLGFDD---AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~----~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||++++|..+++.+...|++|+++.++.+  ..+    .++ ..|...   ..|..+.+...+.+.+...  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999888889999988765432  222    222 334321   1344443233333333221  


Q ss_pred             CCccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          107 DGIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 ~~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|++++++|..                           ..+.+++.+.++|+++.++....
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            3699999988731                           12334455667889998876543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.98  E-value=0.00014  Score=56.53  Aligned_cols=104  Identities=14%  Similarity=0.151  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEK---VTLLKDKLGFDDA--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||+  +++|.++++.+...|++|+++.++.+.   .+.+.++++....  .|..+.++..+.+.+...  +.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57899999987  489999998888899999998877543   2333324443222  344443344433333322  47


Q ss_pred             ccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|++++++|..               .               .+.+++.++.+|+++.++...
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            99999987621               1               133456666678988877644

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.98  E-value=6.6e-05  Score=58.11  Aligned_cols=80  Identities=18%  Similarity=0.273  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      ++.++||+||+|++|..+++.+...|++|+.++++++..+... +.....    ..|..+.+++...+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999888889999999998876555444 432211    2344443233333332211  36899


Q ss_pred             EEcCcch
Q 027106          112 YFDNVGA  118 (228)
Q Consensus       112 vld~~g~  118 (228)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9998873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.97  E-value=5.3e-05  Score=58.41  Aligned_cols=81  Identities=22%  Similarity=0.281  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG--FD---DAFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+.  ..   ...|..+.+++...+.+..  .+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999998888889999999999887666543443  11   1234444324433333321  13689


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      +|+.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.97  E-value=4.8e-05  Score=58.93  Aligned_cols=81  Identities=20%  Similarity=0.209  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      -++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++...+.+...  ++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999988899999999999887665554333   221   12344443234333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|+++.++|
T Consensus        83 ~d~vi~~ag   91 (258)
T PRK07890         83 VDALVNNAF   91 (258)
T ss_pred             ccEEEECCc
Confidence            899999886

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.96  E-value=8.1e-05  Score=59.85  Aligned_cols=80  Identities=15%  Similarity=0.201  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---D-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++++.   . .  ..|..+..+....+.+..  .+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            477999999999999999988888899999999988877665534431   1 1  134444323333333321  2369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999887

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.96  E-value=5.9e-05  Score=59.25  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      +|+++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   |...   ..|..+.+++...+.+..  .+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998877665543233   3211   234444323333333221  1368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK05717 oxidoreductase; Validated

Probab=97.95  E-value=7.6e-05  Score=57.83  Aligned_cols=80  Identities=19%  Similarity=0.241  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|.+++|+||+|++|..++..+...|++|++++++.++.+.+.++++.. .  ..|..+..+....+.+...  +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999888888999999988776655544245432 1  2344443233333333222  368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.++|
T Consensus        89 i~~ag   93 (255)
T PRK05717         89 VCNAA   93 (255)
T ss_pred             EECCC
Confidence            99887

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.95  E-value=6e-05  Score=58.42  Aligned_cols=81  Identities=25%  Similarity=0.328  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc--eeeccChhhHHHHHHHHC--CCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-DD--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      ..+++|+|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   +. ..  ..|..+.+++.+.+.+..  .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            45789999999999999999998889999999999988776554232   11 11  124433324443333321  137


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.95  E-value=6.9e-05  Score=58.03  Aligned_cols=81  Identities=22%  Similarity=0.388  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      +|+++||+||+|++|..+++.+...|++|+++++++++.+.+.+++   |.. .  ..|..+.+++...+.+..  .+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999988888999999998877655443232   221 1  124444424433333322  2368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.94  E-value=7e-05  Score=57.99  Aligned_cols=80  Identities=25%  Similarity=0.353  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++   +...   ..|..+.++....+.+...  +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999888889999999999888766554333   3211   1244443233333333221  379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        85 d~li~~ag   92 (254)
T PRK07478         85 DIAFNNAG   92 (254)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.94  E-value=8.7e-06  Score=70.42  Aligned_cols=79  Identities=20%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHhCCCceeeccC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS---------------------KEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      ..++|++|+|+|+ |+.|+++++.++..|++|++++..                     ..+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            4678999999996 999999999999999999998842                     34567777 889866555432


Q ss_pred             hhhH-HHHHHHHCCCCccEEEcCcchh
Q 027106           94 ETDL-KAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        94 ~~~~-~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      ..+. .+.+    ..++|+||+++|..
T Consensus       211 ~~~~~~~~~----~~~~D~Vi~AtG~~  233 (564)
T PRK12771        211 GEDITLEQL----EGEFDAVFVAIGAQ  233 (564)
T ss_pred             CCcCCHHHH----HhhCCEEEEeeCCC
Confidence            1121 1111    12699999999863

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=97.94  E-value=0.00014  Score=55.40  Aligned_cols=105  Identities=21%  Similarity=0.211  Sum_probs=74.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...+..+|++||=.+  +|.|-.+..+++..|- +|++++.++..++.++++......  +..-.. +. +.+. +.+..
T Consensus        45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~-dA-e~LP-f~D~s  119 (238)
T COG2226          45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG-DA-ENLP-FPDNS  119 (238)
T ss_pred             HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEe-ch-hhCC-CCCCc
Confidence            344566899999997  7889999999999885 999999999999998865543110  111111 11 1111 22338


Q ss_pred             ccEEEcCcch-------hHHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGA-------EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ||+|..+.|-       ..+.++.|.|+|+|+++++....
T Consensus       120 FD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         120 FDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             cCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            9999776662       38899999999999999988654

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.93  E-value=0.00025  Score=54.95  Aligned_cols=90  Identities=20%  Similarity=0.282  Sum_probs=62.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce---eeccChhhHHHHHHHHCCC-Ccc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDA---FNYKEETDLKAALKRYFPD-GID  110 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~-~~d  110 (228)
                      +.++++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++.+....+   +....            .. .||
T Consensus       117 ~~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD  181 (250)
T PRK00517        117 VLPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKAD  181 (250)
T ss_pred             cCCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcC
Confidence            578999999994 54 877776554 566 699999999988888733221111   11110            11 599


Q ss_pred             EEEcCcchh----HHHHHHHccccCcEEEEEeee
Q 027106          111 IYFDNVGAE----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       111 ~vld~~g~~----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +|+.+....    .+..+.+.|+++|+++..|..
T Consensus       182 ~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        182 VIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             EEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            998766543    567788999999999998753

>PRK06194 hypothetical protein; Provisional

Probab=97.92  E-value=8.6e-05  Score=58.56  Aligned_cols=81  Identities=14%  Similarity=0.253  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .+.++||+||+|++|..+++.+...|++|++++++.+..+...+++   +..-   ..|..+.+++.+.+.+..  .+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3679999999999999999888889999999998876655443233   3211   124443323333333221  1368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.92  E-value=0.00011  Score=57.00  Aligned_cols=79  Identities=20%  Similarity=0.237  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ceeeccChhhHHHHHHHHCC--CCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-----DAFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      +.+|||+||+|++|..+++.+...|++|++++++.++.+.+.+++...     ...|..+.+++.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            468999999999999999888888999999999888776655333211     12344443244443333322  35899


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999876

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.91  E-value=0.00023  Score=52.20  Aligned_cols=92  Identities=24%  Similarity=0.251  Sum_probs=63.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcch--
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGA--  118 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~--  118 (228)
                      |+|.||+|.+|..+++.+...|.+|+++++++++.+.   ..+.+.+ .|..+...+.+.+.     ++|+||++.|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~-----~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALK-----GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHT-----TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhh-----hcchhhhhhhhhc
Confidence            7999999999999999999999999999999887664   2233221 23333212222222     69999999983  


Q ss_pred             ---hHHHHHHHccccCc--EEEEEeeec
Q 027106          119 ---EMQEAAIANMNTYG--RVAVCGVIS  141 (228)
Q Consensus       119 ---~~~~~~~~~l~~~G--~~v~~g~~~  141 (228)
                         +.....++.++..|  +++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence               35556666665544  788877644

...

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.91  E-value=0.00031  Score=52.74  Aligned_cols=104  Identities=16%  Similarity=0.210  Sum_probs=76.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceee-ccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~~~~~~~~~~~~  105 (228)
                      ...+.+...+||=.|  +++|..++.+|..+.  .+++.++.++++.+.+++   +.|.+..+. .... +..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            446677888999998  889999999999886  489999999999888874   456654221 1113 5555555533


Q ss_pred             CCCccEEE-cCcch---hHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+.||.|| |+.-.   ..++.++++|++||.++.-.
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            45899986 55433   48999999999999998844

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.91  E-value=8e-05  Score=55.84  Aligned_cols=99  Identities=19%  Similarity=0.210  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCce-eeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKD---KLGFDDA-FNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~~  105 (228)
                      +..++++|++||-.|  +|.|..++-+++..|.  +|+.++..++-.+.+++   .+|...+ +...+.   .....  .
T Consensus        66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~--~  138 (209)
T PF01135_consen   66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWP--E  138 (209)
T ss_dssp             HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTG--G
T ss_pred             HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhccc--c
Confidence            667799999999999  7789999999998875  79999988876665553   3455432 222221   11111  1


Q ss_pred             CCCccEEEcCcchh-HHHHHHHccccCcEEEEE
Q 027106          106 PDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       106 ~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~  137 (228)
                      .++||.|+-+.+-+ .-...++.|++||++|..
T Consensus       139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            13799999877754 556788999999999993

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.89  E-value=7.8e-05  Score=57.66  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ce--eeccChhhHHHHHHHHCC--CCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-DA--FNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      |+++||+|+++++|...++.+...|++|++++++.++.+.+.+++   +.. ..  .|..+.+++...+.+...  +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            578999999999999999999999999999998887665554232   211 11  244443234333333221  3689


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999886

>PLN02253 xanthoxin dehydrogenase

Probab=97.89  E-value=0.00011  Score=57.84  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---D--AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .|+++||+||+|++|.++++.+...|++|++++++++..+.+.++++..   .  ..|..+.+...+.+.+...  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999888888999999998776655544344321   1  2344444233333333222  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        97 ~li~~Ag  103 (280)
T PLN02253         97 IMVNNAG  103 (280)
T ss_pred             EEEECCC
Confidence            9999886

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.89  E-value=0.00013  Score=56.28  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|.++||+|++|++|..+++.+...|++|+++++++++.+.+.++   .+..   ...|..+.+...+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999888999999999887765544322   2332   12343333233333333222  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++|+++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.89  E-value=9e-05  Score=59.12  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .|.+|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  .+|..+.++....+.+...  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            6789999999999999999888888999999998877655432222     111 1  2344443234333433322  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6999999887

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.89  E-value=0.00034  Score=54.41  Aligned_cols=105  Identities=14%  Similarity=0.127  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHh-CCC---ceeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS---KEKVTLLKDKL-GFD---DAFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~~~~-g~~---~~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|++++|+||+  +++|.++++.+...|++|+++.++   .++.+.+.+++ +..   ..+|..+.++....+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            57899999986  799999998888899999988654   34444444344 211   12355444344444443322  


Q ss_pred             CCccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106          107 DGIDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 ~~~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|++++++|..               .               .+.+++.+.++|+++.++...+
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            4799999887620               0               1234556667899999887543

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.88  E-value=0.00027  Score=53.29  Aligned_cols=99  Identities=20%  Similarity=0.195  Sum_probs=67.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++++|++||-.|  +|.|..+..+++..+  .+|+.++.+++..+.+++.   .|...+- .... +...   ...+
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~-~~~g-d~~~---~~~~  142 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVE-VIVG-DGTL---GYEE  142 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEEC-Cccc---CCCc
Confidence            567889999999999  677888888888775  5999999999888777643   3433221 1111 1110   1112


Q ss_pred             -CCccEEEcCcc-hhHHHHHHHccccCcEEEEE
Q 027106          107 -DGIDIYFDNVG-AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 -~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~  137 (228)
                       +.||+|+-... .......++.|++||+++..
T Consensus       143 ~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        143 NAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence             37999875443 35667788999999999884

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.88  E-value=0.00032  Score=50.90  Aligned_cols=101  Identities=22%  Similarity=0.292  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...++++|+.++=+|+  |.|..++++++.. ..+||+++++++..+..+.   +||.+.+....-  +..+.+..+.  
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~L~~~~--  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEALPDLP--  101 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHhhcCCC--
Confidence            4467899999888884  4466667777543 3499999999998877652   588765433221  3333333221  


Q ss_pred             CccEEEcCcch---hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVGA---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|.+|=--|.   ..++.++..|+++|++|.-.
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            58999854443   38899999999999999843

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.87  E-value=0.00043  Score=51.47  Aligned_cols=79  Identities=24%  Similarity=0.259  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc-eeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD-AFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      -++.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+.++    ... ..+..+.++..+.+     .+.|+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~di  100 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI-----KGADV  100 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH-----hcCCE
Confidence            367899999999999999888888889999999999888776653442    211 12222221222333     24899


Q ss_pred             EEcCcchhH
Q 027106          112 YFDNVGAEM  120 (228)
Q Consensus       112 vld~~g~~~  120 (228)
                      ||.+++...
T Consensus       101 Vi~at~~g~  109 (194)
T cd01078         101 VFAAGAAGV  109 (194)
T ss_pred             EEECCCCCc
Confidence            999887543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.86  E-value=0.00011  Score=57.52  Aligned_cols=82  Identities=26%  Similarity=0.345  Sum_probs=57.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC------ceeeccChhh---HHHHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FD------DAFNYKEETD---LKAALKRY  104 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~------~~~~~~~~~~---~~~~~~~~  104 (228)
                      -.|+++||+|++.|+|.+.+..+...|++|+.+.+++++.+..+.++.   ..      ...|..+.++   ..+...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999988766653322   11      1234433212   22233333


Q ss_pred             CCCCccEEEcCcch
Q 027106          105 FPDGIDIYFDNVGA  118 (228)
Q Consensus       105 ~~~~~d~vld~~g~  118 (228)
                      ..+++|++++++|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            34579999998773

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00016  Score=54.79  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=55.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      ++++|+|++|++|..+++.+...|++|++++++.+..+.++ ..+.. ...|..+.+++...+....++++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            47999999999999999888788999999999888777666 55543 22444444233333333333379999988763

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.86  E-value=0.00011  Score=57.03  Aligned_cols=77  Identities=29%  Similarity=0.315  Sum_probs=53.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc--eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD--AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      ++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +...  ..|..+.++..+.+.+...  +++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6999999999999999888889999999999887765554333   2211  2344444244444433322  3799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        82 ~naG   85 (259)
T PRK08340         82 WNAG   85 (259)
T ss_pred             ECCC
Confidence            9887

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00015  Score=55.16  Aligned_cols=76  Identities=13%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +++|+||++++|...++.+...|++|+.+.+++++.+.+.++.+... ..|..+.+++.+.+.+.. +.+|++++++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            58999999999999999888889999999999888776653555432 235554424444444332 25899998764

>PRK08643 acetoin reductase; Validated

Probab=97.86  E-value=0.00011  Score=56.92  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      ++++||+||+|++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+.....+.+...  +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999998889999999998887665554232   2211   1344444233333333221  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++.++|
T Consensus        82 ~vi~~ag   88 (256)
T PRK08643         82 VVVNNAG   88 (256)
T ss_pred             EEEECCC
Confidence            9999886

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00012  Score=55.77  Aligned_cols=80  Identities=9%  Similarity=0.130  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--C-C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--D-G  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~-~  108 (228)
                      +|.+++|+|+++++|.+.+..+...|++|+++.+++++.+.+.++   .+...   ..|..+.++..+.+.+...  + .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988888999999999988876655422   24321   1233333233333333221  3 6


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999886

>PRK08589 short chain dehydrogenase; Validated

Probab=97.85  E-value=0.0001  Score=57.74  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++ ++.+.+.+++   +..   ..+|..+.++....+.+...  +++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            57899999999999999998888899999999988 4443332233   221   12344443233333333321  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        84 d~li~~Ag   91 (272)
T PRK08589         84 DVLFNNAG   91 (272)
T ss_pred             CEEEECCC
Confidence            99999876

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.85  E-value=0.00044  Score=57.60  Aligned_cols=76  Identities=26%  Similarity=0.343  Sum_probs=55.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      .+..+|++|+|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+++|... ++..   +..+.+.     ++|+|
T Consensus       175 ~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-i~~~---~l~~~l~-----~aDvV  244 (417)
T TIGR01035       175 FGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-VKFE---DLEEYLA-----EADIV  244 (417)
T ss_pred             hCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-eeHH---HHHHHHh-----hCCEE
Confidence            44567899999995 999999999999999 489999999887664443777532 2221   3333332     58999


Q ss_pred             EcCcchh
Q 027106          113 FDNVGAE  119 (228)
Q Consensus       113 ld~~g~~  119 (228)
                      |+|++.+
T Consensus       245 i~aT~s~  251 (417)
T TIGR01035       245 ISSTGAP  251 (417)
T ss_pred             EECCCCC
Confidence            9999863

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00012  Score=56.43  Aligned_cols=80  Identities=19%  Similarity=0.230  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+.+++|+|++|++|..+++.+...|++|++++++++..+.+.+++   +..   ...|..+.+.....+.+...  +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            5679999999999999999888889999999998876654443232   211   12344433233332222211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++|+++|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999887

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.85  E-value=0.00012  Score=53.60  Aligned_cols=89  Identities=21%  Similarity=0.281  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|+| .|.+|..++++++.+|++|++.+++....+... ..+..    ..   ++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence            4689999999 599999999999999999999998877655344 44431    11   33334443     69998877


Q ss_pred             ch-h-----HHHHHHHccccCcEEEEEee
Q 027106          117 GA-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +. +     .-...+..|+++..+|.++.
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            63 2     44667899999999999864

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK09242 tropinone reductase; Provisional

Probab=97.84  E-value=0.00012  Score=56.71  Aligned_cols=81  Identities=22%  Similarity=0.315  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCc---eeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFDD---AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|+++||+|++|++|..+++.+...|++|++++++.++.+.+.+++     +...   ..|..+.++....+.+..  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999998889999999999887766554332     2111   124443323333333221  13


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|+++.++|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.84  E-value=0.00013  Score=56.25  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .|+++||+||+|++|..+++.+...|++|++++++...  .+.++ +.+..   ...|..+.+++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999998888899999999976521  22233 34421   12344443244433333221  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9999876

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.83  E-value=0.00016  Score=56.75  Aligned_cols=80  Identities=13%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKV---TLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++  ++|.+.++.+...|++|+++.++++..   +.+.++.|...  ..|..+.++....+.+...  +.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999986  999999998888999999988765322   22222345322  2355544344444433322  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999887

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.83  E-value=0.00015  Score=56.29  Aligned_cols=80  Identities=19%  Similarity=0.272  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      .+.++||+|++|++|...++.+...|++|++++++.++.+.+.++.+.. .  ..|..+.++....+.+..  .+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3679999999999999999998889999999999988776665444421 1  123333323333333321  1368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.++|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            98876

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00016  Score=55.94  Aligned_cols=75  Identities=16%  Similarity=0.258  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCCCCccEE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +.++||+||+|++|..+++.+...|++|+++++++.+.+.+.+.   .+.. .  ..|..+. +   .+.+...+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence            46899999999999999999999999999999887766555422   2221 1  1344433 1   2222223479999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      |+++|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99887

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.82  E-value=0.0004  Score=55.58  Aligned_cols=100  Identities=23%  Similarity=0.258  Sum_probs=70.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +...++++++||..|+  |.|..++.+++..+.  .|++++.+++..+.+++   +.|.+.+.... . +..+....  .
T Consensus        74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-g-D~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-G-DGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-Chhhcccc--c
Confidence            4567889999999994  469999999998764  79999999987776663   35654433222 1 32222211  1


Q ss_pred             CCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.+|+|+.+.+. ......++.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            369999988775 3555678999999998873

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.82  E-value=0.00023  Score=55.35  Aligned_cols=105  Identities=15%  Similarity=0.155  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC-
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS------KEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP-  106 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~------~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~-  106 (228)
                      .|++++|+||+  +++|.++++.+...|++|+++.++      ++..+.+.++.+...  ..|..+.++..+.+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            57899999985  799999998888899999887533      222333331222111  2355544344433333322 


Q ss_pred             -CCccEEEcCcchh---------------H---------------HHHHHHccccCcEEEEEeeecc
Q 027106          107 -DGIDIYFDNVGAE---------------M---------------QEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 -~~~d~vld~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                       +++|++++++|..               .               .+.+++.++.+|+++.++...+
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence             4799999988721               0               1335566777899998876543

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00024  Score=55.35  Aligned_cols=81  Identities=23%  Similarity=0.351  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Cc--eeeccChhhHHHHHHHHC-CCCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GF-DD--AFNYKEETDLKAALKRYF-PDGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~--~~~~~~~~~~~~~~~~~~-~~~~d~  111 (228)
                      ++.++||+||+|++|...++.+...|++|+++++++++.+.+..++  +. ..  ..|..+.+...+.+.... .+++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4679999999999999999888889999999999988776665343  11 11  123333323222222221 247899


Q ss_pred             EEcCcch
Q 027106          112 YFDNVGA  118 (228)
Q Consensus       112 vld~~g~  118 (228)
                      +++++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9998774

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00017  Score=56.54  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=54.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      .++||+||+|++|..+++.+...|.+|+++.+++++.+.+++..+.. .  ..|..+.+.+.+.+.+..  .+++|++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999888888999999999988777666333321 1  234444323333333322  136899999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        83 ~ag   85 (276)
T PRK06482         83 NAG   85 (276)
T ss_pred             CCC
Confidence            886

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.82  E-value=0.00017  Score=55.68  Aligned_cols=77  Identities=22%  Similarity=0.358  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      +|+|+||+|++|.+.+..+...|++|+++++++++.+.+.+.++...   ..|..+.+++...+.+...  +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999988899999999999887776653454321   1244443233333333222  369999988


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        82 ag   83 (248)
T PRK10538         82 AG   83 (248)
T ss_pred             CC
Confidence            76

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.81  E-value=0.00016  Score=55.90  Aligned_cols=80  Identities=21%  Similarity=0.427  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .++++||+||++++|..+++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+.+.+...+.+..  .+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999888889999999998877665543233   221 1  134444323333333221  1369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        88 d~vi~~ag   95 (254)
T PRK08085         88 DVLINNAG   95 (254)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00018  Score=55.78  Aligned_cols=83  Identities=11%  Similarity=0.132  Sum_probs=52.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHH---hCCC--ce--eeccChhhHHHHHHHHCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEK-VTLLKDK---LGFD--DA--FNYKEETDLKAALKRYFP  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~-~~~~~~~---~g~~--~~--~~~~~~~~~~~~~~~~~~  106 (228)
                      +..+.+|||+||+|++|..+++.+... |++|+++++++++ .+.+.++   .+..  .+  +|..+..+..+.+.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            456789999999999999999876666 4899999987764 4433222   2321  11  344443233333333322


Q ss_pred             -CCccEEEcCcch
Q 027106          107 -DGIDIYFDNVGA  118 (228)
Q Consensus       107 -~~~d~vld~~g~  118 (228)
                       +++|++++++|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence             479999887753

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00017  Score=55.49  Aligned_cols=79  Identities=19%  Similarity=0.307  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +.++||+||+|++|..+++.+...|++|+++++++++.+.+...+     +.. .  ..|..+.+++...+.+...  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999988888788999999999887765554222     211 1  1344444244444443322  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999886

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.00013  Score=56.25  Aligned_cols=81  Identities=16%  Similarity=0.174  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC-c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GFD-D--AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      ++.+++|+||+|++|..+++.+...|++|+.+.++.++.+...++.  +.. .  ..|..+.+...+.+.+...  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999999888888999999998877665544233  221 1  1244443233333333221  3799


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.79  E-value=0.00018  Score=56.45  Aligned_cols=107  Identities=13%  Similarity=0.135  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC-
Q 027106           35 KPKKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP-  106 (228)
Q Consensus        35 ~~~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~-  106 (228)
                      ++-.|+++||+||+  +++|.+.++.+...|++|+.+.+++   ++.+.+.++++...  ..|..+.++....+.+... 
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            34467899999986  7999999988888999999887653   33444443455321  2344444344444433322 


Q ss_pred             -CCccEEEcCcchh---------------HH---------------HHHHHccccCcEEEEEeeec
Q 027106          107 -DGIDIYFDNVGAE---------------MQ---------------EAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       107 -~~~d~vld~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~  141 (228)
                       +++|++++++|..               .+               +.+++.++.+|+++.++...
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence             3799999987621               11               22345666679998887654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.79  E-value=0.00018  Score=55.82  Aligned_cols=80  Identities=25%  Similarity=0.343  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+   +..   ...|..+.+.+...+.+...  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999888889999999999887766554232   221   12344443233332322211  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |+++.++|
T Consensus        91 d~vi~~ag   98 (259)
T PRK08213         91 DILVNNAG   98 (259)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.79  E-value=0.00018  Score=55.00  Aligned_cols=78  Identities=14%  Similarity=0.170  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      ++++||+||++++|..+++.+...|++|+++++++++. +.++ ..|... ..|..+.++....+.+...  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            56899999999999999998888999999999876543 3333 445321 2344433233333333322  36999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            887

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.79  E-value=0.00025  Score=56.81  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--C--c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF--D--D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--~--~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      +.+++|+||++++|.++++.+...| ++|++++++.++.+.+.++++.  .  .  ..|..+..+....+.+..  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            6799999999999999998888889 8999999988877665545432  1  1  134444423333333332  2379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999876

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07985 oxidoreductase; Provisional

Probab=97.79  E-value=0.00031  Score=55.80  Aligned_cols=105  Identities=17%  Similarity=0.148  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +++++||+||++++|.++++.+...|++|+++.++.  +..+.+.+   +.|..   ...|..+.++....+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567999999999999999998888999999876432  23333321   23321   12344443233333333322  3


Q ss_pred             CccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|++++++|..                           ..+.+++.++.+|+++.++....
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            689999887621                           11234455566789999876543

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.79  E-value=6.6e-05  Score=58.66  Aligned_cols=78  Identities=18%  Similarity=0.362  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+..   .+... ..|..+.+++...+.....  +++|++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            356899999999999999988888899999999887654322   12221 2355544344444443322  36999999


Q ss_pred             Ccch
Q 027106          115 NVGA  118 (228)
Q Consensus       115 ~~g~  118 (228)
                      ++|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9873

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.79  E-value=0.00021  Score=55.60  Aligned_cols=80  Identities=15%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|++++|+||++  ++|.+.++.+...|++|+.+.+++.   ..+.+.++.|...  .+|..+.++....+.+...  +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999986  8999999888888999998887642   2222322334322  2455554344444443322  46


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999876

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.78  E-value=0.00023  Score=55.04  Aligned_cols=80  Identities=24%  Similarity=0.311  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++.+|||+|++|++|...++.+...|.+|+++++++++.+.+..++   +..   ...|..+.+++...+.+..  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999888888999999999887765543232   321   1234444323333333222  1369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |+++.+++
T Consensus        83 d~vi~~a~   90 (258)
T PRK12429         83 DILVNNAG   90 (258)
T ss_pred             CEEEECCC
Confidence            99998886

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00019  Score=56.38  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC---Cc--eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGF---DD--AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~--~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .+.++||+||+|++|...+..+...|++|++++++++..+.+.+.   .+.   ..  ..|..+.+++.. +.+...  +
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            357899999999999999988888899999999887766554322   221   11  235554434443 433322  3


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|+++.++|.
T Consensus        81 ~id~vv~~ag~   91 (280)
T PRK06914         81 RIDLLVNNAGY   91 (280)
T ss_pred             CeeEEEECCcc
Confidence            68999998763

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00016  Score=55.91  Aligned_cols=80  Identities=18%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++.+++|+||+|++|..+++.+...|++|+.+++++++.+.+.+.   .+.. .  ..|..+.+++...+.+..  .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999988888899999999988765544322   2321 1  134443323333333221  1368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        86 d~li~~ag   93 (253)
T PRK06172         86 DYAFNNAG   93 (253)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00021  Score=56.01  Aligned_cols=80  Identities=24%  Similarity=0.235  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC--CCCccEEE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF--PDGIDIYF  113 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~vl  113 (228)
                      +.+|||+||+|++|..+++.+...|.+|++++++.++.+.+.+.++.. .  ..|..+.+++...+.+..  -+++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999999999999999888888999999999888776665343321 1  134443323333333321  13689999


Q ss_pred             cCcch
Q 027106          114 DNVGA  118 (228)
Q Consensus       114 d~~g~  118 (228)
                      .++|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99873

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00019  Score=55.48  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+++   +.. .  ..|..+.++....+.+...  +.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999998889999999998877665544332   221 1  1244433233333333221  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99998886

>PRK06720 hypothetical protein; Provisional

Probab=97.77  E-value=0.00022  Score=51.73  Aligned_cols=80  Identities=16%  Similarity=0.271  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      +|.+++|+||++++|...+..+...|++|++++++.+..+...+++   +...   ..|..+.+++.+.+.+..  .+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888888999999998876654432232   3221   123333223333322211  1468


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.0002  Score=54.88  Aligned_cols=82  Identities=15%  Similarity=0.253  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ..++++||+|++|++|..++..+...|.+|+++++++++.+.+.+++   +.. .  ..|..+.++....+.+...  ++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45679999999999999999998889999999999887665554222   211 1  2344443233333333221  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.76  E-value=0.00019  Score=54.97  Aligned_cols=81  Identities=20%  Similarity=0.316  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+++...  +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999999999999999888889999999999877655443222   2211   1233333244444443321  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999998763

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00024  Score=55.64  Aligned_cols=80  Identities=11%  Similarity=0.124  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc--e--eeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD--A--FNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~--~--~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ++.++||+|++|++|..+++.+...|++|+++++++++.+...+++.    ...  +  .|..+.++....+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999988776544432321    111  1  244333233333333322  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|+++.++|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            6899999886

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00015  Score=55.52  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C-c--eeeccC---h--hhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-D-D--AFNYKE---E--TDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~-~--~~~~~~---~--~~~~~~~~~~~  105 (228)
                      ++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++   +. . .  ..|..+   .  ..+...+.+..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999888889999999999988766554332   21 1 1  123221   1  12233343333


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      .+.+|++++++|
T Consensus        85 ~~~id~vi~~ag   96 (239)
T PRK08703         85 QGKLDGIVHCAG   96 (239)
T ss_pred             CCCCCEEEEecc
Confidence            246899999887

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00031  Score=54.46  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +.++||+||+|++|...+..+...|++|++++++.++.+.+.+++....    ..|..+.+.+...+.+...  +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5689999999999999998888889999999998887665553432111    2344443233333333221  368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.+.|
T Consensus        82 i~~ag   86 (257)
T PRK07074         82 VANAG   86 (257)
T ss_pred             EECCC
Confidence            99886

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.75  E-value=0.00021  Score=55.31  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLGFDD---AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +|+++||+||++++|.++++.+...|++|+++.++...  .+.++ +.+...   ..|..+.++....+.+..  .+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999888899999988765422  12233 344321   235444434444443322  13699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00019  Score=55.82  Aligned_cols=80  Identities=21%  Similarity=0.341  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +.+|||+||+|++|..+++.+...|++|+++++++.+.+.+.+.+   +...   ..|..+.+.+...+.+...  +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            358999999999999999988889999999999877655443222   3211   1244443233333333321  3689


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      ++++++|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999863

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.73  E-value=0.00024  Score=55.73  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+..+....+.+...  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998877655443232   321 1  1344433233333333221  379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.73  E-value=0.00023  Score=55.26  Aligned_cols=81  Identities=19%  Similarity=0.277  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++.++||+|++|++|..+++.+...|++|+++++++++.+.+.++   .+...   ..|..+.....+.+.+..  .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998889999999999988665444323   33321   124444323333332221  1368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998863

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.73  E-value=5.9e-05  Score=63.51  Aligned_cols=95  Identities=18%  Similarity=0.194  Sum_probs=64.8

Q ss_pred             hcCCCCCCEEE----EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCC
Q 027106           33 IGKPKKGEKVF----VSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        33 ~~~~~~g~~Vl----I~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      +.++++|+++|    |+||+|++|.+++|+++..|++|+.+.+.+.+....+ ..+.. .++|.+.. .+.+.+...   
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~---  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL---  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH---
Confidence            46678999998    9999999999999999999999999876655333222 23333 34444433 222232221   


Q ss_pred             CccEEEcCcchhHHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                                ...++..++.|.++|+++.++....
T Consensus       103 ----------~~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        103 ----------YEFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             ----------HHHHHHHHHhccCCCEEEEEccccc
Confidence                      1355677888889999999886543

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00074  Score=51.82  Aligned_cols=104  Identities=15%  Similarity=0.128  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC-ce--eeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD-DA--FNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~-~~--~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      ++.++||+|++|++|..+++.+...|++|+.+.++. ...+.+.+   ..+.. ..  .|..+.++....+.+..  .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567999999999999999999999999988776543 22222221   23321 11  23333323333333221  136


Q ss_pred             ccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|+++.++|..                          ..+.+++.++.+|+++.++...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            89999988731                          1223445556678999987644

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.72  E-value=0.00049  Score=51.66  Aligned_cols=101  Identities=18%  Similarity=0.166  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +...++++++||-.|  .|.|..++.+++..+  .+|+.++.+++..+.+++.   .+....+..... +..+.+.  ..
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~--~~  140 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLE--KH  140 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCc--cC
Confidence            556788999999999  567888888888764  5999999998877776633   343211111111 2111111  12


Q ss_pred             CCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+|+-+... .....+.+.|++||+++..
T Consensus       141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            379998866553 4556778999999999874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.72  E-value=0.00032  Score=53.98  Aligned_cols=81  Identities=27%  Similarity=0.363  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHH-HHHH--HhCCCce---eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVT-LLKD--KLGFDDA---FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~-~~~~--~~g~~~~---~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++.++||+|++|++|..+++.+...|++|++..+ +..+.+ .+.+  ..+....   .|..+.++....+.+...  ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999889998887543 333222 2220  2343221   344443233333333221  37


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=97.72  E-value=6.8e-05  Score=58.28  Aligned_cols=75  Identities=17%  Similarity=0.183  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      +|+++||+||++++|.+.+..+...|++|+++++++.+...+.     ....|..+..++.+.+.+...  +++|+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4789999999999999999999999999999987754321110     112344443244333433322  369999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        80 Ag   81 (258)
T PRK06398         80 AG   81 (258)
T ss_pred             CC
Confidence            76

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.72  E-value=0.00043  Score=57.38  Aligned_cols=79  Identities=15%  Similarity=0.154  Sum_probs=56.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ...+--.|.+|||.|+ |++|.+++..+...|+ +++++.++.++.+.+.++++...+...+   +..+.+     ..+|
T Consensus       174 ~~~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l-----~~aD  244 (414)
T PRK13940        174 RQLDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLI-----KKAD  244 (414)
T ss_pred             HHhcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHh-----ccCC
Confidence            3344456789999995 9999999999998997 8999999988887777567622222221   222222     2489


Q ss_pred             EEEcCcchh
Q 027106          111 IYFDNVGAE  119 (228)
Q Consensus       111 ~vld~~g~~  119 (228)
                      +||+|++.+
T Consensus       245 iVI~aT~a~  253 (414)
T PRK13940        245 IIIAAVNVL  253 (414)
T ss_pred             EEEECcCCC
Confidence            999999975

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00025  Score=55.06  Aligned_cols=78  Identities=22%  Similarity=0.350  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ce--eeccChhhHHHHHHHHCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-DA--FNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ++.+++|+|+++++|...++.+...|++|+++++++++.+.+.+++    +.. ..  .|..+.+++...+...  +++|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4789999999999999999988889999999999887766544233    221 11  2444432333333322  4699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++++.|
T Consensus        84 ~lv~~ag   90 (259)
T PRK06125         84 ILVNNAG   90 (259)
T ss_pred             EEEECCC
Confidence            9999876

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00022  Score=55.29  Aligned_cols=82  Identities=15%  Similarity=0.156  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      -++.+++|+|++|++|..+++.+...|++ |++++++.++.+...+   +.+..   ..+|..+.+.+.+.+.....  +
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999899997 9999988765543321   23332   12344444233333332211  3


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|+++++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00019  Score=55.62  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC---ceeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD--KLGFD---DAFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +|.++||+||+|++|..+++.+...|++|+++++++++.+..++  +.+..   ...|..+.+++...+.+...  +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            46799999999999999998888899999999988776544331  22321   12344443233333333222  3799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++.++|
T Consensus        86 ~vi~~ag   92 (258)
T PRK08628         86 GLVNNAG   92 (258)
T ss_pred             EEEECCc
Confidence            9999987

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00027  Score=55.83  Aligned_cols=82  Identities=18%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHh---CCCc---eeeccChhhHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK---------EKVTLLKDKL---GFDD---AFNYKEETDLKAAL  101 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~---------~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~  101 (228)
                      -+|.++||+||++++|.+.++.+...|++|++++++.         ++.+.+.+++   |...   ..|..+.++..+.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4678999999999999999988888999999887654         4333332232   3211   13444432444434


Q ss_pred             HHHCC--CCccEEEcCcch
Q 027106          102 KRYFP--DGIDIYFDNVGA  118 (228)
Q Consensus       102 ~~~~~--~~~d~vld~~g~  118 (228)
                      .+...  +++|++++++|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            33321  479999998873

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.69  E-value=0.00036  Score=53.47  Aligned_cols=81  Identities=22%  Similarity=0.352  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-e--eeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-A--FNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+|||+|++|++|...++.+...|.+|+++.+++++.+.+.+.   .+... +  .|..+.+.+...+.+...  +++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999988888899999999988765544322   23211 1  344443233333333211  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+++.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999998754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.69  E-value=0.00035  Score=53.62  Aligned_cols=80  Identities=28%  Similarity=0.407  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      ++.++||+||+|++|..+++.+...|+.|+...++.++.+.+....+.. .  ..|..+.+.+...+.+...  +++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999888889999988888877766554344431 1  1233333233333322211  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.++|
T Consensus        85 i~~ag   89 (245)
T PRK12936         85 VNNAG   89 (245)
T ss_pred             EECCC
Confidence            99887

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.69  E-value=0.00029  Score=51.14  Aligned_cols=104  Identities=20%  Similarity=0.173  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cC---------------hhhHHHHHH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KE---------------ETDLKAALK  102 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~---------------~~~~~~~~~  102 (228)
                      ..+|+|.|+ |.+|.-|+.+++.+|++|+..+..+++.+... ..+...+... .+               .......+.
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            368999995 99999999999999999999999998888777 6665333221 00               012222333


Q ss_pred             HHCCCCccEEEcCcc--h---h--HHHHHHHccccCcEEEEEeeecccCC
Q 027106          103 RYFPDGIDIYFDNVG--A---E--MQEAAIANMNTYGRVAVCGVISEYTD  145 (228)
Q Consensus       103 ~~~~~~~d~vld~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~  145 (228)
                      +... .+|+++.+.-  +   +  .-.+.++.|+++..++.++...++++
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG~i  146 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGGSI  146 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-SB
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCCCc
Confidence            2211 3788885321  1   1  44677889999999999987766654

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PLN02476 O-methyltransferase

Probab=97.69  E-value=0.0011  Score=51.75  Aligned_cols=105  Identities=15%  Similarity=0.094  Sum_probs=72.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      +....+..+.++||=.|  +++|..++.+|+.++  .+|+.++.+++..+.+++   +.|..+-+..... +..+.+.++
T Consensus       110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l  186 (278)
T PLN02476        110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM  186 (278)
T ss_pred             HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence            33456677889999999  788999999998774  479999999988877763   3566433333222 444444433


Q ss_pred             C----CCCccEEE-cCcch---hHHHHHHHccccCcEEEEE
Q 027106          105 F----PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       105 ~----~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~  137 (228)
                      .    .+.||.|| |+.-.   ..+..++++|++||.++.=
T Consensus       187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            1    23799976 44332   3788899999999998873

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=97.69  E-value=0.00076  Score=51.31  Aligned_cols=101  Identities=17%  Similarity=0.232  Sum_probs=72.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++.+|++|+=.|  .|.|.+++-+|+..|.  +|+..+..++..+.+++.   +|....+..... |..+.+.   +
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~---~  161 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGID---E  161 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccc---c
Confidence            568899999998877  6778899999998876  999999999988887743   454432222222 3322221   1


Q ss_pred             CCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..||.||--...  ..++.+.+.|++||.++.+.
T Consensus       162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence            268987644443  59999999999999999975

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.69  E-value=0.00031  Score=56.01  Aligned_cols=105  Identities=15%  Similarity=0.247  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeeccChhhHHHHHHHHC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD----AFNYKEETDLKAALKRYF--P  106 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~~~~~~--~  106 (228)
                      -.|.+++|+|+++|+|..++.-+...|++|+..+++.++.+.+++++..    ..    .+|-++..+......++.  .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            4668999999999999999999999999999999999877777655442    22    234444323333333332  2


Q ss_pred             CCccEEEcCcchh------------------------HHHHHHHccccC--cEEEEEeeec
Q 027106          107 DGIDIYFDNVGAE------------------------MQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       107 ~~~d~vld~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                      .+.|+.++++|--                        ....+++.|+..  +|+|.+++..
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~  173 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL  173 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence            3789999887721                        224455666654  8999988644

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.68  E-value=0.00038  Score=54.45  Aligned_cols=86  Identities=21%  Similarity=0.218  Sum_probs=61.3

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee--------ccChhhHHHHHHHH
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN--------YKEETDLKAALKRY  104 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~~~~~~~~~  104 (228)
                      +.+.++...|+|+|++.|+|++.+..++..|++|.++.++.+++..++..++....+.        ..+.+.....+.+.
T Consensus        27 ~~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l  106 (331)
T KOG1210|consen   27 IVKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL  106 (331)
T ss_pred             hcccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence            3445566799999999999999999999999999999999999988876666532211        11111122333333


Q ss_pred             C--CCCccEEEcCcch
Q 027106          105 F--PDGIDIYFDNVGA  118 (228)
Q Consensus       105 ~--~~~~d~vld~~g~  118 (228)
                      .  .+.+|.+|+|+|.
T Consensus       107 ~~~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  107 RDLEGPIDNLFCCAGV  122 (331)
T ss_pred             hhccCCcceEEEecCc
Confidence            1  2478999999984

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.68  E-value=0.00029  Score=54.73  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .+++++|+|+  ++++|.+.++.+...|++|++++++.  +..+.+.++++..   ...|..+.++..+.+.+...  ++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998  79999999988888999999988653  3344444344431   12344444234333333221  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 iD~li~nAG   94 (256)
T PRK07889         86 LDGVVHSIG   94 (256)
T ss_pred             CcEEEEccc
Confidence            999999876

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.67  E-value=0.00023  Score=55.25  Aligned_cols=79  Identities=15%  Similarity=0.181  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .|.++||+||++++|.+.++.+...|++|++++++ ++.+.+.+   +.+..   ...|..+.+.....+.+..  .+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999988899999999876 33333321   23321   1234444423333333322  1368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        93 d~li~~ag  100 (258)
T PRK06935         93 DILVNNAG  100 (258)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00024  Score=54.94  Aligned_cols=75  Identities=17%  Similarity=0.262  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ceeeccChhhHHHHHHHHC--CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--D-DAFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      .|+++||+||+|++|..+++.+...|++|+++++++++    . ..+.  . ...|..+.++..+.+....  .+++|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999987654    1 2222  1 1234444323433333322  1368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      |.++|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99886

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00031  Score=54.41  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      +|.++||+|+++++|.++++.+...|++|++++++.+ ..+.+.++   .+.. .  ..|..+.++..+.+.+..  .++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5779999999999999999988889999999987643 22222212   2321 1  124444323433333322  146


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.65  E-value=0.00036  Score=53.99  Aligned_cols=81  Identities=22%  Similarity=0.313  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|.+++|+||++++|..+++.+...|++|+++++++++.+.+.++   .+.. .  ..|..+.+++...+.+...  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            588999999999999999988888899999999987765544322   2321 1  2244443233333333221  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+++.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999988773

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00042  Score=53.49  Aligned_cols=74  Identities=20%  Similarity=0.363  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .|++++|+||+|++|..+++.+...|++|+++++++ +..+...  .+...  ..|..+. +   .+.+.. +++|++++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~-~---~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKE-E---SLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCH-H---HHHHhc-CCCCEEEE
Confidence            468999999999999999998888999999998776 2222211  11112  2344332 1   222222 36999999


Q ss_pred             Ccch
Q 027106          115 NVGA  118 (228)
Q Consensus       115 ~~g~  118 (228)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9873

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.65  E-value=0.00094  Score=49.27  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      .++++.+||-.|  .|.|..++.+++.. +++|++++.+++..+.+++   +.+.+. +..... +..+ +..  .+.||
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            356689999999  45566666666544 5799999999887776653   344433 222221 2222 111  23799


Q ss_pred             EEEcCcch---hHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNVGA---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~g~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+.....   ..+..+.+.|+++|+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            99864332   47788899999999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.65  E-value=0.00031  Score=54.69  Aligned_cols=80  Identities=11%  Similarity=0.199  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDD--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||  ++++|.+.++.+...|++|+++.+++...+.++   ++.|...  ..|..+.++....+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  579999999888889999998765533222222   1233211  2344444344434433322  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        85 iD~lVnnAG   93 (261)
T PRK08690         85 LDGLVHSIG   93 (261)
T ss_pred             CcEEEECCc
Confidence            999999886

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.65  E-value=0.00041  Score=54.91  Aligned_cols=96  Identities=22%  Similarity=0.194  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ..+|++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++..   +....+..... +    ......++||+
T Consensus       157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence            468899999993 44 877777665 465 9999999998888777322   22211111111 1    11122347999


Q ss_pred             EEcCcch----hHHHHHHHccccCcEEEEEee
Q 027106          112 YFDNVGA----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       112 vld~~g~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+.+...    ..+..+.+.|+++|.++..|.
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            9876543    266777899999999999874

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.65  E-value=0.00038  Score=53.89  Aligned_cols=103  Identities=13%  Similarity=0.163  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      .|.+++|+||+|++|...++.+...|++|+++.++ ++..+.++ ..+... ..|..+.++..+.+.+...  +++|+++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999888899999887654 33434444 333322 2344444244444433321  3699999


Q ss_pred             cCcchh-----------H---------------HHHHHHccc--cCcEEEEEeeec
Q 027106          114 DNVGAE-----------M---------------QEAAIANMN--TYGRVAVCGVIS  141 (228)
Q Consensus       114 d~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~  141 (228)
                      +++|..           .               .+.+++.+.  .+|+++.++...
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~  140 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNA  140 (255)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHH
Confidence            988631           0               233445554  468999988654

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00088  Score=51.75  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCCc---eeeccChhhH---HHHHHH----
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDKL---GFDD---AFNYKEETDL---KAALKR----  103 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~~---g~~~---~~~~~~~~~~---~~~~~~----  103 (228)
                      .+.+++|+||++++|.++++.+...|++|+++. ++.++.+.+..++   +...   ..|..+.++.   .+.+.+    
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            478999999999999999999888999998864 4444443332122   2211   1233222122   222222    


Q ss_pred             HCC-CCccEEEcCcchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          104 YFP-DGIDIYFDNVGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       104 ~~~-~~~d~vld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ..+ +++|++++++|..           .+               +.+++.++..|+++.++...+
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            112 2699999988721           12               234556667799999887654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.64  E-value=0.00043  Score=53.34  Aligned_cols=82  Identities=16%  Similarity=0.190  Sum_probs=53.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc--e--eecc--ChhhHHHHHHHHCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD--A--FNYK--EETDLKAALKRYFP  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--~--~~~~--~~~~~~~~~~~~~~  106 (228)
                      ..++.+|||+|++|++|...++.+...|++|++++++.++.+.+.+++   +...  +  .+..  +.+++.+.+.....
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999888888999999999887654443232   2211  1  2221  11133333322221


Q ss_pred             --CCccEEEcCcc
Q 027106          107 --DGIDIYFDNVG  117 (228)
Q Consensus       107 --~~~d~vld~~g  117 (228)
                        +.+|+++.+++
T Consensus        89 ~~~~id~vi~~Ag  101 (247)
T PRK08945         89 QFGRLDGVLHNAG  101 (247)
T ss_pred             HhCCCCEEEECCc
Confidence              36899998876

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=97.64  E-value=0.0013  Score=50.45  Aligned_cols=105  Identities=17%  Similarity=0.138  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |....+..++++||-.|  ++.|..++.+++.++  .+|+.++.+++..+.+++   +.|...-+..... +..+.+.++
T Consensus        60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l  136 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQL  136 (234)
T ss_pred             HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHH
Confidence            33456677889999998  677888888888764  499999999988877763   3454332222222 444444433


Q ss_pred             C----CCCccEEEcCcc----hhHHHHHHHccccCcEEEEE
Q 027106          105 F----PDGIDIYFDNVG----AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       105 ~----~~~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~  137 (228)
                      .    .+.||+||--..    ...+..+++++++||.++.-
T Consensus       137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            1    237999875432    24788889999999988763

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.64  E-value=0.00047  Score=53.74  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+   |...   ..|..+.......+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999998888888999999998887665443232   3211   2344443233333333221  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999998873

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.64  E-value=0.00044  Score=54.03  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=59.1

Q ss_pred             CCCCEEEEEcCCchHHHHHH-HHHHHcCCEEEEEeCCHHHHHHHHHH----hCC---CceeeccChhhHHHHHHHHCCC-
Q 027106           37 KKGEKVFVSAASGSVGHLVG-QYAKLFGCYVVGSAGSKEKVTLLKDK----LGF---DDAFNYKEETDLKAALKRYFPD-  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~-~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~-  107 (228)
                      +-|++..|+||+.|+|.+-+ ++|+ .|.+|+.+.|++++++..+++    .++   ..++|..+++..-+.+++...+ 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            45789999999999998866 5555 899999999999999777644    343   2246766652234555555555 


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      .+-+++|++|.
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            78889999884

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00047  Score=53.63  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD--KLGFDD---AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      ++.+++|+||+|++|..+++.+...|++|++++++.+..+.+++  ..+...   ..|..+.++....+.+..  .+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999888899999999987654333331  223221   234443323333333221  13689


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++.++|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.64  E-value=0.00041  Score=53.73  Aligned_cols=80  Identities=21%  Similarity=0.267  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+.+|||+||++++|..++..+...|++|+.++++.++.+.+.++   .+.. .  ..|..+.++..+.+.....  +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998888999999999887766544322   2321 1  2344444233333333221  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        90 d~li~~ag   97 (255)
T PRK06113         90 DILVNNAG   97 (255)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.63  E-value=0.00045  Score=53.91  Aligned_cols=80  Identities=16%  Similarity=0.255  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCC--ceeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFD--DAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|++++|+||++  ++|.++++.+...|++|+.+.+++.   ..+.+..+.+..  ...|..+.+++...+.+...  +.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            578999999875  8999999888889999998887632   223332122321  12355544344444443322  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.63  E-value=0.00045  Score=53.69  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----hCCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK----LGFD-D--AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~----~g~~-~--~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||++++|.+++..+...|++|+.+.+ ++++.+.+.++    .+.. .  .+|..+.++....+.+...  +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999988889999988764 44444333212    2321 1  2344444344444433322  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      .+|++++++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6999999875

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.63  E-value=0.0011  Score=50.12  Aligned_cols=100  Identities=20%  Similarity=0.196  Sum_probs=66.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +...+++|++||-.|  +|.|..++.+++..+.  +|+.++.+++..+.+++.   +|.+.+-... . +..+...  ..
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~-~-d~~~~~~--~~  144 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV-G-DGTQGWE--PL  144 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE-C-CcccCCc--cc
Confidence            556789999999998  6778888888887654  799999998887777633   3443221111 1 2111111  11


Q ss_pred             CCccEEEcCcc-hhHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVG-AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+|+-... ......+.+.|++||+++..
T Consensus       145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            37998875433 34666788999999998874

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.62  E-value=0.00021  Score=51.48  Aligned_cols=78  Identities=19%  Similarity=0.319  Sum_probs=50.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS--KEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~--~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      ++++|+||++++|...++.+...|. +|+.+.++  .++.+.+.++   .+.. .  ..|..+.++....+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999998887777777 77888887  4544444223   3421 1  134444434444444433  237


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++|+++|
T Consensus        81 ld~li~~ag   89 (167)
T PF00106_consen   81 LDILINNAG   89 (167)
T ss_dssp             ESEEEEECS
T ss_pred             ccccccccc
Confidence            999998877

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.62  E-value=0.00041  Score=53.39  Aligned_cols=81  Identities=19%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+.+|||+||+|++|..++..+...|++|++++++.++.+.+.+.   .+...   ..|..+.+++.+.+.+...  +++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            467999999999999999988888899999999986654433212   22211   1234433233333333221  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+++.+++.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999988753

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.62  E-value=0.0012  Score=48.89  Aligned_cols=98  Identities=16%  Similarity=0.148  Sum_probs=61.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCC-C
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLF-G-CYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPD-G  108 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g-~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~-~  108 (228)
                      ...+++|++||..|+ |+-+. +..+++.. + .+|++++.++..    . ..+...+ .|..+. .....+.+..++ +
T Consensus        27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~   98 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK   98 (188)
T ss_pred             hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence            356799999999994 44444 44444443 3 489999988754    1 2233321 233333 334445544444 8


Q ss_pred             ccEEEc-Cc----c-------------hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFD-NV----G-------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld-~~----g-------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+|+. ..    |             ...+..+.++|+++|+++...
T Consensus        99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            999995 21    2             236677889999999999864

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00045  Score=55.17  Aligned_cols=79  Identities=16%  Similarity=0.210  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HhCCCc---eeeccChhhHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----------EKVTLLKD---KLGFDD---AFNYKEETDLKAAL  101 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----------~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~  101 (228)
                      .|++++|+||++++|.++++.+...|++|++++++.          ++.+.+.+   ..|...   ..|..+.++....+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            578999999999999999999888999999998762          23332221   233211   23444442444333


Q ss_pred             HHHCC--CCccEEEcCc
Q 027106          102 KRYFP--DGIDIYFDNV  116 (228)
Q Consensus       102 ~~~~~--~~~d~vld~~  116 (228)
                      .+...  +++|++++++
T Consensus        87 ~~~~~~~g~iDilVnnA  103 (305)
T PRK08303         87 ERIDREQGRLDILVNDI  103 (305)
T ss_pred             HHHHHHcCCccEEEECC
Confidence            33222  4699999987

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.60  E-value=0.0015  Score=50.35  Aligned_cols=104  Identities=17%  Similarity=0.197  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHhCCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVT----LLKDKLGFD-D--AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~----~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .+.++||+||+|++|...++.+...|++|+...++ .+...    .++ +.+.. .  ..|..+..+....+.+...  +
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999998888899998776643 22222    222 23322 1  1344443233333333221  3


Q ss_pred             CccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|++|.++|..                          ..+.+.+.++..|+++.++...+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            689999988720                          12334556667789999887553

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.60  E-value=0.00049  Score=53.00  Aligned_cols=80  Identities=16%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ce--eeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-DA--FNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+.   .+.. .+  .|..+.+...+.+.....  +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999888999999999888766554422   2221 11  233333233333333221  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++|.++|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.60  E-value=0.00038  Score=54.22  Aligned_cols=80  Identities=16%  Similarity=0.278  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGS---KEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +++++||+||  ++++|.++++.+...|++|+.+.+.   .++.+.+.++++...  ..|..+.++....+.+...  ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  5799999998888899999887543   334443432444321  2344444344444443322  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            999999876

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.59  E-value=0.00046  Score=53.41  Aligned_cols=80  Identities=21%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .|.++||+|+++++|.++++.+...|++|+.++++..  ..+.++ +.+...   ..|..+.++....+.+...  +++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999998889999998875432  223333 334211   1343333233333333221  3699


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      ++++++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.0014  Score=51.42  Aligned_cols=101  Identities=20%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC-CCCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF-PDGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~-~~~~d~  111 (228)
                      +++++|+|+ |++|.+++..+. .|++|+++++++++.+.+.+++   |.. .  ..|..+.+++...+.+.. .+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899997 899999988775 7999999998877665443233   321 1  235554434444443331 147999


Q ss_pred             EEcCcchh----H---------------HHHHHHccccCcEEEEEeeec
Q 027106          112 YFDNVGAE----M---------------QEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       112 vld~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +++++|..    .               .+.+++.+.++|+++.++...
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            99998731    1               233445566667777766544

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00087  Score=51.43  Aligned_cols=76  Identities=20%  Similarity=0.248  Sum_probs=51.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cc--eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DD--AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+++|+||+|++|...+..+...|++|+++++++++.+.+. ..+. ..  ..|..+.+++.+.+.+. ....|.++.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~a   79 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNA   79 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcC
Confidence            47999999999999988888888999999999988877665 3221 11  24555543444444433 22457766555


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        80 g   80 (240)
T PRK06101         80 G   80 (240)
T ss_pred             c
Confidence            4

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.57  E-value=0.00059  Score=56.46  Aligned_cols=75  Identities=27%  Similarity=0.382  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      +|++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.  .. ..|..+.++    +.+.. +++|++++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~----v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAA----LAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHH----HHHHh-CCCCEEEE
Confidence            578999999999999999988888899999999887665432211111  11 124343312    22222 36999998


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            876

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.57  E-value=0.0028  Score=52.09  Aligned_cols=78  Identities=27%  Similarity=0.318  Sum_probs=58.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ...+--.+.+|||.|+ |-+|..++..+...|. +|++..|+.++.+.+.+++|... +..+   +..+.+.     .+|
T Consensus       171 ~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~---el~~~l~-----~~D  240 (414)
T COG0373         171 RIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALE---ELLEALA-----EAD  240 (414)
T ss_pred             HHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHH---HHHHhhh-----hCC
Confidence            3344347889999996 9999999999999996 89999999999888776899533 2222   3333332     389


Q ss_pred             EEEcCcchh
Q 027106          111 IYFDNVGAE  119 (228)
Q Consensus       111 ~vld~~g~~  119 (228)
                      +||.+++.+
T Consensus       241 vVissTsa~  249 (414)
T COG0373         241 VVISSTSAP  249 (414)
T ss_pred             EEEEecCCC
Confidence            999998864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.56  E-value=0.00046  Score=53.55  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC--c--eeeccChhhHHHHHHHHC--CCC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFD--D--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~--~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      ++++||+||+|++|...++.+...|++|+.++++..+.+.+.++    .+..  .  ..|..+..+....+.+..  .++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999998888899999999887655444322    2211  1  124443323333333321  146


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            899999886

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.56  E-value=0.00074  Score=52.07  Aligned_cols=80  Identities=20%  Similarity=0.218  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHH---HCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKR---YFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~---~~~~~~d  110 (228)
                      .+.++||+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++.. .  ..|..+.+++.+.+.+   ..++++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3578999999999999999988888999987654 455555444344421 1  1244443233333333   2222499


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9998875

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.56  E-value=0.00066  Score=50.79  Aligned_cols=105  Identities=18%  Similarity=0.157  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |....+.....+||-+|  +++|..++.+|+.+  +.+|+.++.+++..+.+++   +.|...-+..... +..+.+.++
T Consensus        37 L~~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l  113 (205)
T PF01596_consen   37 LQMLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPEL  113 (205)
T ss_dssp             HHHHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHH
T ss_pred             HHHHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHH
Confidence            33445566778999999  88899999999986  4699999999998888763   3455332332222 333444333


Q ss_pred             ---C-CCCccEEE-cCcch---hHHHHHHHccccCcEEEEE
Q 027106          105 ---F-PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       105 ---~-~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~  137 (228)
                         . .+.||.|| |+.-.   ..+..++++|++||.++.=
T Consensus       114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence               2 23799986 55433   3788899999999998884

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00057  Score=53.41  Aligned_cols=78  Identities=19%  Similarity=0.228  Sum_probs=51.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++   +...   ..|..+.+++.+.+.....  +++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7999999999999999888888999999998887665443222   2221   1233333233333332221  369999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      ++++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            998873

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=97.55  E-value=0.00078  Score=51.77  Aligned_cols=106  Identities=16%  Similarity=0.233  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhhH-HHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDL-KAALKR  103 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~-~~~~~~  103 (228)
                      +....++.||++|+=.|  +|.|.++.-+++..|.  +|+..+.++++.+.+++.   +|....+..... |. .+.+.+
T Consensus        32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence            33568999999999887  6778888888888874  999999999998888753   555432221111 22 111211


Q ss_pred             HCCCCccEEEcCcch--hHHHHHHHcc-ccCcEEEEEe
Q 027106          104 YFPDGIDIYFDNVGA--EMQEAAIANM-NTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld~~g~--~~~~~~~~~l-~~~G~~v~~g  138 (228)
                      ...+.+|.||-=.+.  ..+..+.+.| ++||+++++.
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            112368987643443  5999999999 8999999985

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK07402 precorrin-6B methylase; Provisional

Probab=97.55  E-value=0.0045  Score=46.04  Aligned_cols=102  Identities=13%  Similarity=0.143  Sum_probs=64.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...+++++++||=.|  .|.|..++.+++.. +.+|++++.+++..+.+++   +++...+-... . +..+.+.... .
T Consensus        34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~-d~~~~~~~~~-~  108 (196)
T PRK07402         34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-G-SAPECLAQLA-P  108 (196)
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-C-chHHHHhhCC-C
Confidence            556788999998888  45566666667654 4699999999988887763   34543321111 1 2222222222 2


Q ss_pred             CccE-EEcCcc--hhHHHHHHHccccCcEEEEEe
Q 027106          108 GIDI-YFDNVG--AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~-vld~~g--~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|. +++...  ...++.+.+.|++||+++...
T Consensus       109 ~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        109 APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            2344 444332  247888899999999998874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.54  E-value=0.00047  Score=60.98  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc----eeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD----AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~----~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|+++||+||+|++|.++++.+...|++|++++++.++.+.+.+++    +...    ..|..+..++...+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999988889999999999887665544232    3211    234444323434343322  24


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|++++++|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            79999998873

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.54  E-value=0.0011  Score=51.02  Aligned_cols=75  Identities=17%  Similarity=0.317  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +++++||+|++|++|...++.+...|++|++++++.     .. ..+.. .  ..|..+.+.+.+.+.+...  +++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999998888999999999775     22 22221 1  1244433233333333221  368999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      ++++|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            998774

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.54  E-value=0.0024  Score=43.37  Aligned_cols=101  Identities=19%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+.++++|+-.|+  |.|..+..+++..+ .+|++++.++...+.+++   .++...+.... . +....... ..+
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~   87 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-G-DAPEALED-SLP   87 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-c-cccccChh-hcC
Confidence            4456778899999993  44988999998865 599999999988877653   24433221111 1 11111111 123


Q ss_pred             CccEEEcCcch----hHHHHHHHccccCcEEEEE
Q 027106          108 GIDIYFDNVGA----EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       108 ~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~  137 (228)
                      .+|+|+...+.    ..++.+.+.|+++|+++..
T Consensus        88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        88 EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            79999865432    3788899999999999875

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.54  E-value=0.00078  Score=54.04  Aligned_cols=94  Identities=18%  Similarity=0.201  Sum_probs=61.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|||+||+|-+|..+++.+...|.+|++++++.++...+. ..+.+.+ .|..+..++.+.+     .++|+|+++++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al-----~g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF-----KGVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH-----CCCCEEEECCCCC
Confidence            7999999999999999998889999999998877655544 4454322 1333331232222     2589999986531


Q ss_pred             -------------HHHHHHHccccCc--EEEEEeee
Q 027106          120 -------------MQEAAIANMNTYG--RVAVCGVI  140 (228)
Q Consensus       120 -------------~~~~~~~~l~~~G--~~v~~g~~  140 (228)
                                   ....+++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                         1123445454444  88887764

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=97.53  E-value=0.0014  Score=51.21  Aligned_cols=103  Identities=13%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ...++.++.+||=.|+  |.|..+..+++..+++|++++.+++..+.+++.+.....+..... ++..  ..+.++.||+
T Consensus        46 ~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~FD~  120 (263)
T PTZ00098         46 SDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENTFDM  120 (263)
T ss_pred             HhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCCeEE
Confidence            5578899999999983  456666777777788999999999988888844432111111111 2211  0111237999


Q ss_pred             EEcC--c---c--h--hHHHHHHHccccCcEEEEEee
Q 027106          112 YFDN--V---G--A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       112 vld~--~---g--~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+..  .   +  .  ..++.+.+.|+|||+++....
T Consensus       121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9852  1   1  1  277888999999999998754

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00036  Score=53.17  Aligned_cols=75  Identities=21%  Similarity=0.193  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhhHHHHHHHHCCC-CccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETDLKAALKRYFPD-GIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~  115 (228)
                      .+.++||+||+|++|...++.+...|.+|+++.++.++ .     ... ....|..+.+.....+.+.... ++|+++.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            36789999999999999999888899999999987654 1     111 1123444442444444433333 68999998


Q ss_pred             cch
Q 027106          116 VGA  118 (228)
Q Consensus       116 ~g~  118 (228)
                      +|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            873

>PRK04148 hypothetical protein; Provisional

Probab=97.53  E-value=0.001  Score=45.96  Aligned_cols=86  Identities=16%  Similarity=0.133  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cChhhHHHHHHHHCCCCccEEE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .-.++.++++.| .| .|...+..+...|.+|++++.++...+.++ +.+...+.+. -++ +.  .+    .+++|+|.
T Consensus        13 ~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~----y~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EI----YKNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HH----HhcCCEEE
Confidence            334678999999 46 887666666678999999999999988888 7776433221 111 11  11    13688888


Q ss_pred             cCcchh-HHHHHHHcccc
Q 027106          114 DNVGAE-MQEAAIANMNT  130 (228)
Q Consensus       114 d~~g~~-~~~~~~~~l~~  130 (228)
                      ..-..+ ....++++.+.
T Consensus        83 sirpp~el~~~~~~la~~  100 (134)
T PRK04148         83 SIRPPRDLQPFILELAKK  100 (134)
T ss_pred             EeCCCHHHHHHHHHHHHH
Confidence            887764 44444444443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.52  E-value=0.00054  Score=52.77  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVG-SAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~-~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|.++||+||+|++|..++..+...|++|++ ..++.++.+.+.++   .+...   ..|..+..+....+.+...  ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999998889998876 45666554443222   23321   1344443233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        83 id~vi~~ag   91 (250)
T PRK08063         83 LDVFVNNAA   91 (250)
T ss_pred             CCEEEECCC
Confidence            899999886

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.52  E-value=0.0043  Score=48.76  Aligned_cols=107  Identities=14%  Similarity=0.195  Sum_probs=74.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CC---CceeeccChhhH---HHHHHHHCCC-C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GF---DDAFNYKEETDL---KAALKRYFPD-G  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~---~~~~~~~~~~-~  108 (228)
                      .+++-|||+|+.+|.|..++.-+...|.+|++.+..++..+.++.+. ..   +-.+|..+++++   ...+++..+. +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            45667999999999999999888899999999997777767666333 11   223555554333   3334444554 7


Q ss_pred             ccEEEcCcch---------------------------hHHHHHHHcccc-CcEEEEEeeeccc
Q 027106          109 IDIYFDNVGA---------------------------EMQEAAIANMNT-YGRVAVCGVISEY  143 (228)
Q Consensus       109 ~d~vld~~g~---------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~  143 (228)
                      .=.++|++|-                           ...+..+.++++ .||+|.+++..|.
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            7778888871                           123445667766 6999999987653

>PRK00811 spermidine synthase; Provisional

Probab=97.52  E-value=0.0015  Score=51.52  Aligned_cols=97  Identities=12%  Similarity=0.071  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeeccChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF-------DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ..+++||+.|  +|.|..+..+++..+. +|++++.+++-.+.+++.+..       +.-+..... +....+.. ..+.
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence            4567999999  5667778888887665 899999999988888843321       111111111 33444433 3448


Q ss_pred             ccEEEcCcc-----------hhHHHHHHHccccCcEEEEE
Q 027106          109 IDIYFDNVG-----------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+....           .+.++.+.+.|+++|.++.-
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            999875321           12467788999999999874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.52  E-value=0.0011  Score=52.00  Aligned_cols=85  Identities=19%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCc----eeeccChh
Q 027106           23 GLTAYAGLFEIG--KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDD----AFNYKEET   95 (228)
Q Consensus        23 ~~ta~~~l~~~~--~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~   95 (228)
                      +.--+.+|.+..  ...+|++++|.|| ||.+.+++.-++..|+ +|+++.|+.++.+.+.+.++...    .....+. 
T Consensus       108 ~~G~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~-  185 (283)
T COG0169         108 GIGFLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL-  185 (283)
T ss_pred             HHHHHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc-
Confidence            333444554322  2346899999996 9999999999999996 89999999999888875665321    1111111 


Q ss_pred             hHHHHHHHHCCC-CccEEEcCcch
Q 027106           96 DLKAALKRYFPD-GIDIYFDNVGA  118 (228)
Q Consensus        96 ~~~~~~~~~~~~-~~d~vld~~g~  118 (228)
                               ... .+|+++|+++.
T Consensus       186 ---------~~~~~~dliINaTp~  200 (283)
T COG0169         186 ---------EGLEEADLLINATPV  200 (283)
T ss_pred             ---------ccccccCEEEECCCC
Confidence                     011 38999999873

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.001  Score=52.13  Aligned_cols=81  Identities=20%  Similarity=0.195  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++   .+...   ..|..+.+++...+.+..  -+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999988888899999999877665443322   23221   124444323333333321  1368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++|.++|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999988863

>PRK12743 oxidoreductase; Provisional

Probab=97.51  E-value=0.00069  Score=52.52  Aligned_cols=79  Identities=15%  Similarity=0.228  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-ce--eeccChhhHHHHHHHHCC--CCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKD---KLGFD-DA--FNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~-~~--~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++++||+||++++|..+++.+...|++|+.+.+ +.++.+.+.+   ..|.. ..  .|..+.+.....+.+...  +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999999999988754 4444333321   23432 11  344443233333332211  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |+++.++|
T Consensus        82 d~li~~ag   89 (256)
T PRK12743         82 DVLVNNAG   89 (256)
T ss_pred             CEEEECCC
Confidence            99998887

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.50  E-value=0.00067  Score=52.36  Aligned_cols=79  Identities=18%  Similarity=0.221  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +.++||+|++|++|..++..+...|.+|++++++.++.+.+.+.+   +..   ...|..+.+++...+.+..  .+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            358999999999999999888888999999999887766555222   221   1124444323333333321  13689


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++.+.+
T Consensus        81 ~vi~~a~   87 (255)
T TIGR01963        81 ILVNNAG   87 (255)
T ss_pred             EEEECCC
Confidence            9988775

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN02366 spermidine synthase

Probab=97.50  E-value=0.0016  Score=51.83  Aligned_cols=99  Identities=16%  Similarity=0.051  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....++||+.|+  |-|..+..+++..+. +|.+++.+++-.+.+++.+..      +.-+..... |....+++..++.
T Consensus        89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~  165 (308)
T PLN02366         89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCC
Confidence            356789999994  446677788887665 899999888888888733321      111111112 4444444433347


Q ss_pred             ccEEEcCcch-----------hHHHHHHHccccCcEEEEE
Q 027106          109 IDIYFDNVGA-----------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vld~~g~-----------~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+--...           +.++.+.++|+++|.++.-
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            9998743221           3577888999999999763

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=97.49  E-value=0.0031  Score=48.55  Aligned_cols=104  Identities=14%  Similarity=0.111  Sum_probs=72.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |....+....++||-.|  +.+|..++.+|+.+  +.+|+.++.+++..+.+++   +.|..+-+..... +..+.+.++
T Consensus        71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l  147 (247)
T PLN02589         71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQM  147 (247)
T ss_pred             HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHH
Confidence            33445566778999999  78999999999987  4599999999887777653   3465333333333 444455443


Q ss_pred             C-----CCCccEEE-cCcch---hHHHHHHHccccCcEEEE
Q 027106          105 F-----PDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       105 ~-----~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~  136 (228)
                      .     .+.||.|| |+--.   ..+..++++|++||.++.
T Consensus       148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            2     24799987 44322   378888999999999876

>PRK07069 short chain dehydrogenase; Validated

Probab=97.48  E-value=0.00065  Score=52.31  Aligned_cols=77  Identities=16%  Similarity=0.290  Sum_probs=50.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC----ceeeccChhhHHHHHHHHCC--CCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKLG----FD----DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~g----~~----~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +++|+||+|++|...++.+...|++|++++++ .++.+.+.+++.    ..    ...|..+.+.+...+.+...  +++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999998888889999999987 555544442332    11    11244444344443333222  368


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |+++.++|
T Consensus        81 d~vi~~ag   88 (251)
T PRK07069         81 SVLVNNAG   88 (251)
T ss_pred             cEEEECCC
Confidence            99999887

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=97.48  E-value=0.00093  Score=49.81  Aligned_cols=101  Identities=17%  Similarity=0.079  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...+..++.+||-.|  .|.|..+..+++. |.+|++++.+++..+.+++..   +... +..... ++.+.  . .++.
T Consensus        24 ~~l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~--~-~~~~   95 (197)
T PRK11207         24 EAVKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL--T-FDGE   95 (197)
T ss_pred             HhcccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC--C-cCCC
Confidence            334566778999999  5567788888874 889999999998777766322   2221 111111 22111  1 1236


Q ss_pred             ccEEEcCcc-----h----hHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ||+|+.+..     .    ..+..+.++|++||.++.+...
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~~  136 (197)
T PRK11207         96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM  136 (197)
T ss_pred             cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence            999986432     1    3677888999999997665443

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00037  Score=54.09  Aligned_cols=76  Identities=21%  Similarity=0.280  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      +|+++||+||+|++|...++.+...|++|++++++....  ..  -... ...|..+.+.....+.+..  .+++|++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999988888899999999875431  11  0111 1234444323332222221  136999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            887

>PRK09135 pteridine reductase; Provisional

Probab=97.47  E-value=0.00091  Score=51.38  Aligned_cols=80  Identities=10%  Similarity=0.102  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC----ceeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKL---GFD----DAFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~---g~~----~~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .+.++||+||+|++|..+++.+...|++|++++++ ..+.+.+.+.+   +..    ...|..+.+.....+....  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999998888889999999875 33333332121   111    1234444323333333221  13


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|+||.++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.47  E-value=0.00075  Score=51.78  Aligned_cols=79  Identities=25%  Similarity=0.358  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++++||+||+|++|..++..+...|++|+++ .++.++.+.+.+.+   +.. .  ..|..+.+.+...+.....  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5699999999999999998877889999988 88776655443232   211 1  1244443233332322211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (247)
T PRK05565         85 DILVNNAG   92 (247)
T ss_pred             CEEEECCC
Confidence            99998876

>PRK05599 hypothetical protein; Provisional

Probab=97.46  E-value=0.00074  Score=52.09  Aligned_cols=76  Identities=16%  Similarity=0.200  Sum_probs=50.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc----eeeccChhhHHHHHHHHC--CCCccE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD----AFNYKEETDLKAALKRYF--PDGIDI  111 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~----~~~~~~~~~~~~~~~~~~--~~~~d~  111 (228)
                      +++|+||++++|.+.++.+. .|.+|+++.+++++.+.+.+++   |...    .+|..+.+.....+.+..  .+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999887665 4999999999888776554333   3221    234444323333333322  147999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        81 lv~nag   86 (246)
T PRK05599         81 AVVAFG   86 (246)
T ss_pred             EEEecC
Confidence            998876

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.46  E-value=0.0014  Score=51.68  Aligned_cols=109  Identities=17%  Similarity=0.132  Sum_probs=67.0

Q ss_pred             hHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHH
Q 027106           22 SGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKA   99 (228)
Q Consensus        22 ~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   99 (228)
                      .+.....++... ..-..+.+++|.|+ |++|.+++..+...| .+|+++.++.++.+.+.++++....+... . +..+
T Consensus       105 D~~G~~~~l~~~~~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~  181 (278)
T PRK00258        105 DGIGFVRALEERLGVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQE  181 (278)
T ss_pred             cHHHHHHHHHhccCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchh
Confidence            334444455321 22346789999995 999999999999999 59999999998887776455422101110 0 1101


Q ss_pred             HHHHHCCCCccEEEcCcchhHH------HHHHHccccCcEEEEEe
Q 027106          100 ALKRYFPDGIDIYFDNVGAEMQ------EAAIANMNTYGRVAVCG  138 (228)
Q Consensus       100 ~~~~~~~~~~d~vld~~g~~~~------~~~~~~l~~~G~~v~~g  138 (228)
                      .     -..+|+|++|++....      ......++++..++.+-
T Consensus       182 ~-----~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        182 E-----LADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             c-----cccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            1     1258999999874321      11235666666666653

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00076  Score=52.87  Aligned_cols=81  Identities=25%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCCc---eeeccChhhHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-------VTLLKD---KLGFDD---AFNYKEETDLKAALKRY  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-------~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~  104 (228)
                      ++.++||+||+|++|..+++.+...|++|++++++.+.       ++.+.+   ..+...   ..|..+.+.....+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            56799999999999999998888889999999976532       111111   233221   13444442333333332


Q ss_pred             CC--CCccEEEcCcch
Q 027106          105 FP--DGIDIYFDNVGA  118 (228)
Q Consensus       105 ~~--~~~d~vld~~g~  118 (228)
                      ..  +.+|++|+++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            11  369999998773

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0014  Score=50.87  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      .+.++||+||+|++|..+++.+...|++|+++.+ +.++.+.+.+++   +.. .  ..|..+.+...+.+.+..  .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999888889999887765 344443332122   321 1  234444323333333322  136


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|+++.++|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK05855 short chain dehydrogenase; Validated

Probab=97.44  E-value=0.00066  Score=58.87  Aligned_cols=81  Identities=19%  Similarity=0.148  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.   .|.. .  ..|..+.+.....+.+..  .+++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999988888999999999988776654422   2331 1  234454423333333322  1369


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999874

>PLN02244 tocopherol O-methyltransferase

Probab=97.44  E-value=0.0016  Score=52.81  Aligned_cols=98  Identities=13%  Similarity=0.189  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +++++||-.|  .|.|..+..+++..|++|++++.++...+.+++.   .|...-+..... +..+  ..+..+.||+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~--~~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN--QPFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc--CCCCCCCccEEE
Confidence            7889999998  5667778888888899999999999887776622   233111111111 1111  011224799998


Q ss_pred             cCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          114 DNVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       114 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ....     .  ..+.++.+.|+|||+++....
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            6432     1  377889999999999998764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.44  E-value=0.00088  Score=51.27  Aligned_cols=78  Identities=23%  Similarity=0.299  Sum_probs=49.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +++||+|++|++|..+++.+...|++|+++.+ ++.+.+...++.   +..   ...|..+...+...+.+..  .+++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            47899999999999999988889999998886 444433322122   211   1124443323333333222  13689


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +||.++|
T Consensus        81 ~vi~~ag   87 (242)
T TIGR01829        81 VLVNNAG   87 (242)
T ss_pred             EEEECCC
Confidence            9999886

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN00203 glutamyl-tRNA reductase

Probab=97.43  E-value=0.0048  Score=52.72  Aligned_cols=74  Identities=24%  Similarity=0.358  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++...+ ......+..+.+     ...|+||.|+
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al-----~~aDVVIsAT  337 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACA-----AEADVVFTST  337 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHH-----hcCCEEEEcc
Confidence            4789999996 9999999999999997 899999999988777756642211 111111222222     2589999998


Q ss_pred             ch
Q 027106          117 GA  118 (228)
Q Consensus       117 g~  118 (228)
                      +.
T Consensus       338 ~s  339 (519)
T PLN00203        338 SS  339 (519)
T ss_pred             CC
Confidence            75

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.43  E-value=0.0011  Score=54.02  Aligned_cols=95  Identities=21%  Similarity=0.165  Sum_probs=67.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC---C-CceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG---F-DDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+|||.|+ |++|..+++.+.+.+ .+|++.+++.++...+. ...   . ...+|..+.+...+.+.     ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence            57999996 999999999988888 69999999999988887 443   2 23455554423334443     3699999


Q ss_pred             CcchhHHHHHH-HccccCcEEEEEeeec
Q 027106          115 NVGAEMQEAAI-ANMNTYGRVAVCGVIS  141 (228)
Q Consensus       115 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~  141 (228)
                      +.+...-..++ .|++.+=.++......
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~  102 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSYYE  102 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence            99986444555 5556666777766543

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=97.42  E-value=0.00021  Score=54.62  Aligned_cols=103  Identities=19%  Similarity=0.277  Sum_probs=63.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCce-eeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL---GFDDA-FNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~  105 (228)
                      +....++|++||-.+  +|.|..+..+++..+  .+|++++-+++-++.++++.   +...+ +...+.+++     .+.
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~l-----p~~  113 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDL-----PFP  113 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S-
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHh-----cCC
Confidence            345678999999998  677888888888876  49999999999998887543   22221 111111011     111


Q ss_pred             CCCccEEEcCcch-------hHHHHHHHccccCcEEEEEeeec
Q 027106          106 PDGIDIYFDNVGA-------EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       106 ~~~~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ++.||+|..+.|-       ..+.++.+.|+|||+++++....
T Consensus       114 d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  114 DNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             CCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence            2379999876652       28889999999999999988654

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.42  E-value=0.0011  Score=51.42  Aligned_cols=81  Identities=19%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++.++||+||++++|...++.+...|++|+++.++. +..+.+.+   ..+..   ...|..+.++....+.....  ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999988877643 33332221   22321   12344444233333332221  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999988873

>PLN00015 protochlorophyllide reductase

Probab=97.42  E-value=0.001  Score=53.10  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=51.4

Q ss_pred             EEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--Cc----eeeccChhhHHHHHHHHC--CCCccEEE
Q 027106           43 FVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF--DD----AFNYKEETDLKAALKRYF--PDGIDIYF  113 (228)
Q Consensus        43 lI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--~~----~~~~~~~~~~~~~~~~~~--~~~~d~vl  113 (228)
                      ||+||++++|..+++.+...| ++|++++++.++.+.+.++++.  ..    .+|..+.+.....+.+..  .+++|+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999888888889 8999999988776655535532  11    235544433433343332  23799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9886

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.42  E-value=0.0044  Score=48.62  Aligned_cols=108  Identities=13%  Similarity=0.124  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHH
Q 027106           23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAAL  101 (228)
Q Consensus        23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~  101 (228)
                      +.....+|.......++.+++|.|+ |++|.+++..+...|++|+++.++.++.+.+.++++.. .+....    ..+  
T Consensus       101 ~~G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~----~~~--  173 (270)
T TIGR00507       101 GIGLVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS----MDE--  173 (270)
T ss_pred             HHHHHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec----hhh--
Confidence            3344444533233456889999996 99999999888888999999999988776665354321 111111    111  


Q ss_pred             HHHCCCCccEEEcCcchhH---H---HHHHHccccCcEEEEEee
Q 027106          102 KRYFPDGIDIYFDNVGAEM---Q---EAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g~~~---~---~~~~~~l~~~G~~v~~g~  139 (228)
                        .....+|+|++|++...   .   ......++++..++.+..
T Consensus       174 --~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       174 --LPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             --hcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence              11125899999987531   1   112345677766766643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0009  Score=59.13  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+.++..+.+.+...  +++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            3679999999999999999888888999999999888766554232   3211   2344444344444433222  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       450 d~li~~Ag  457 (657)
T PRK07201        450 DYLVNNAG  457 (657)
T ss_pred             CEEEECCC
Confidence            99999887

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.42  E-value=0.0014  Score=47.92  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Cc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DD---AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~---~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      ....+|+|+++++|.+..|.....|++|.+.+.+.+..+.....+|.  ++   -.|.++..+....+.+...  +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            35678999999999999999999999999999877665555435654  22   2344444333333433322  37899


Q ss_pred             EEcCcch
Q 027106          112 YFDNVGA  118 (228)
Q Consensus       112 vld~~g~  118 (228)
                      +++|+|-
T Consensus        94 lVncAGI  100 (256)
T KOG1200|consen   94 LVNCAGI  100 (256)
T ss_pred             EEEcCcc
Confidence            9999983

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.41  E-value=0.00097  Score=51.60  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCce-eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GFDDA-FNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+++++........ ++..+ .|..+.   ...+.+....++|+||.+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence            3579999999999999999888888999999998877654332111 12111 233321   112222221268999988


Q ss_pred             cchh--------------HHHHHHHcccc--CcEEEEEeeec
Q 027106          116 VGAE--------------MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus       116 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                      +|..              ....+++.+..  .++++.++...
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            7631              12334444443  36888877653

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=97.41  E-value=0.0032  Score=47.59  Aligned_cols=95  Identities=18%  Similarity=0.258  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|.+||=.|+.|  |++..-+|+ .|++|++++.+++..+.++ ......-  +++..  ...+.+... ++.||+|++.
T Consensus        59 ~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~--~~~edl~~~-~~~FDvV~cm  131 (243)
T COG2227          59 PGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQ--ATVEDLASA-GGQFDVVTCM  131 (243)
T ss_pred             CCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchh--hhHHHHHhc-CCCccEEEEh
Confidence            889999999533  566666665 6899999999999988887 4333221  34543  222233221 1489999863


Q ss_pred             -----cch--hHHHHHHHccccCcEEEEEee
Q 027106          116 -----VGA--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       116 -----~g~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                           +..  ..+..+.++++|+|.++....
T Consensus       132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~STi  162 (243)
T COG2227         132 EVLEHVPDPESFLRACAKLVKPGGILFLSTI  162 (243)
T ss_pred             hHHHccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence                 332  377788899999999988643

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=97.41  E-value=0.0024  Score=50.06  Aligned_cols=80  Identities=15%  Similarity=0.032  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHH
Q 027106           23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAAL  101 (228)
Q Consensus        23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  101 (228)
                      +.....+|.. .+...+++++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.++...    . . +    +
T Consensus       107 ~~Gf~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~-~-~----~  174 (272)
T PRK12550        107 YIAIAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R-P-D----L  174 (272)
T ss_pred             HHHHHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h-h-h----c
Confidence            3344445533 34455679999995 9999999998888998 79999999988887764554211    0 0 1    1


Q ss_pred             HHHCCCCccEEEcCcc
Q 027106          102 KRYFPDGIDIYFDNVG  117 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g  117 (228)
                         ....+|+|++|++
T Consensus       175 ---~~~~~dlvINaTp  187 (272)
T PRK12550        175 ---GGIEADILVNVTP  187 (272)
T ss_pred             ---ccccCCEEEECCc
Confidence               0125899999986

>TIGR02415 23BDH acetoin reductases

Probab=97.41  E-value=0.0012  Score=51.04  Aligned_cols=79  Identities=14%  Similarity=0.204  Sum_probs=51.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCccE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      .+++|+|++|++|...++.+...|++|+.+.++.++.+.+.++   .+.. .  ..|..+.+...+.+.....  +++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3799999999999999988888999999999887665444322   2321 1  1244443233333333221  36899


Q ss_pred             EEcCcch
Q 027106          112 YFDNVGA  118 (228)
Q Consensus       112 vld~~g~  118 (228)
                      +++++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9998863

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.40  E-value=0.0014  Score=50.22  Aligned_cols=81  Identities=25%  Similarity=0.330  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCCc-e--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDK---LGFDD-A--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++.++||+|++|++|..++..+...|++|+++.++.. +.+...++   .+... .  .|..+.+++...+.+...  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4579999999999999999999889999977776544 22222212   22221 1  244443233333333322  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|+++.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999988863

>PRK08264 short chain dehydrogenase; Validated

Probab=97.40  E-value=0.00078  Score=51.50  Aligned_cols=75  Identities=25%  Similarity=0.312  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+.    .+.. .  ..|..+.+++.+.+...  +.+|+++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            467999999999999999999999999 99999988765432    2221 1  13444432333333321  2589999


Q ss_pred             cCcch
Q 027106          114 DNVGA  118 (228)
Q Consensus       114 d~~g~  118 (228)
                      .++|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            88875

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.39  E-value=0.00032  Score=54.63  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      .+.++||+|++|++|.++++.+...|++|+.+++++.+.+.    .... ...|..+.+++.+.+.+..  .+++|++++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999998999999999877654321    1111 1234444424443333322  136899999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        84 ~Ag   86 (266)
T PRK06171         84 NAG   86 (266)
T ss_pred             CCc
Confidence            887

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0014  Score=50.68  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHH---C--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRY---F--  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~---~--  105 (228)
                      .+.+++|+|++|++|..+++.+...|++|++. .++.++.+.+.+++   +.. .  ..|..+.+++...+.+.   .  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            46799999999999999998888889988774 56665554333232   221 1  13444443444333332   1  


Q ss_pred             --C-CCccEEEcCcch
Q 027106          106 --P-DGIDIYFDNVGA  118 (228)
Q Consensus       106 --~-~~~d~vld~~g~  118 (228)
                        + +++|++|.++|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence              1 268999988863

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.38  E-value=0.0016  Score=46.47  Aligned_cols=91  Identities=21%  Similarity=0.256  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      -.-.|++++|.|= |-+|.-.++.++.+|++|++++.++-+.-.+. .-|..- .      ...+.+     ...|+++.
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v-~------~~~~a~-----~~adi~vt   84 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEV-M------TLEEAL-----RDADIFVT   84 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EE-E-------HHHHT-----TT-SEEEE
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEe-c------CHHHHH-----hhCCEEEE
Confidence            3468999999995 99999999999999999999999998776666 555531 1      222222     24799999


Q ss_pred             Ccchh--HHHHHHHccccCcEEEEEee
Q 027106          115 NVGAE--MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       115 ~~g~~--~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++|..  .-.+-++.|+.+..+..+|.
T Consensus        85 aTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             CCCCccccCHHHHHHhcCCeEEeccCc
Confidence            99974  34577788998888877774

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0019  Score=49.62  Aligned_cols=77  Identities=18%  Similarity=0.208  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ce--eeccChhhHHHHHHHHCCCCccEE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-DA--FNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      .+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+    +.. .+  .|..+..+..+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            58999999999999999988888999999999887665443222    111 11  23343323333333322 247999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.++|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            98766

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.35  E-value=0.0027  Score=50.10  Aligned_cols=86  Identities=20%  Similarity=0.057  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CceeeccChhhH
Q 027106           23 GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDL   97 (228)
Q Consensus        23 ~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~   97 (228)
                      +.....+|.....-..+.+|+|.|+ |++|.+++..+...|+ +|++++++.++.+.+.+.++.    ..+....   +.
T Consensus       111 ~~G~~~~l~~~~~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~  186 (284)
T PRK12549        111 WSGFAESFRRGLPDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DL  186 (284)
T ss_pred             HHHHHHHHHhhccCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---ch
Confidence            3334444532222245689999995 9999999999999998 899999998888777645432    1111111   21


Q ss_pred             HHHHHHHCCCCccEEEcCcc
Q 027106           98 KAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g  117 (228)
                      .+.+     ..+|+|++|++
T Consensus       187 ~~~~-----~~aDiVInaTp  201 (284)
T PRK12549        187 AAAL-----AAADGLVHATP  201 (284)
T ss_pred             Hhhh-----CCCCEEEECCc
Confidence            1111     25899999964

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.35  E-value=0.0012  Score=47.81  Aligned_cols=92  Identities=25%  Similarity=0.281  Sum_probs=62.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +|.|+||+|-+|...++-|+..|.+|+++++++++....+ ..-+  .++++..   ...+.+     .|+|+||++.+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence            6889999999999999999999999999999998865433 1111  1222221   111111     279999998763


Q ss_pred             h----------HHHHHHHccccC--cEEEEEeeec
Q 027106          119 E----------MQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       119 ~----------~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                      .          ..+.++..|+.-  -|+..+|.-+
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          334466677663  4888888654

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=97.33  E-value=0.0033  Score=49.12  Aligned_cols=150  Identities=17%  Similarity=0.080  Sum_probs=95.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccCh----------hhHHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEE----------TDLKAALKRY  104 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~  104 (228)
                      .-.++.++|+.|+ |..|+.++-.++..|+-|...+..+.+.+..+ .+|+...-...++          ++|..+-.++
T Consensus       160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            3456778999995 99999999999999999999888888877777 7887432111110          1333222222


Q ss_pred             C-C--CCccEEEcCcc--h-h----HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccc--
Q 027106          105 F-P--DGIDIYFDNVG--A-E----MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH--  172 (228)
Q Consensus       105 ~-~--~~~d~vld~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  172 (228)
                      . .  .++|+||-++-  + +    .-..+...|+||..+|.+....++|-+...   +..-...+++++.|...-..  
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~---pg~~v~~~gV~iig~~nlp~r~  314 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE---PGKVVTKNGVKIIGYTNLPGRL  314 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc---CCeEEEeCCeEEEeecCcchhh
Confidence            2 2  27999998763  2 2    557788999999999998877666643322   12333356677777543221  


Q ss_pred             ----hhHHHHHHHHHHHHHHc
Q 027106          173 ----LNLYQDFISTTCNHLRS  189 (228)
Q Consensus       173 ----~~~~~~~~~~~~~~~~~  189 (228)
                          ...+..-+-.+++++.+
T Consensus       315 a~~aS~LYa~Nl~~~l~ll~~  335 (356)
T COG3288         315 AAQASQLYATNLVNLLKLLCK  335 (356)
T ss_pred             hhhHHHHHHHHHHHHHHHHhc
Confidence                33343444455555444

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=97.32  E-value=0.00098  Score=54.22  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc-eeeccChhhHHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD-AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~-~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +|.+|||+||+|.+|..+++.+...|.+|++++++........+.++.    .. ..|..+.+++.+.+.+   .++|+|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v   79 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV   79 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence            578999999999999999999999999999998765543222112221    11 1233333233333322   168999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +++++
T Consensus        80 ih~A~   84 (349)
T TIGR02622        80 FHLAA   84 (349)
T ss_pred             EECCc
Confidence            99886

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.31  E-value=0.0016  Score=51.44  Aligned_cols=75  Identities=13%  Similarity=-0.008  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      ++.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.. .+.....   . +.+.... ..+|+|++|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence            5789999995 9999999998889998 8999999999888776555432 1111111   0 1111111 258999999


Q ss_pred             cch
Q 027106          116 VGA  118 (228)
Q Consensus       116 ~g~  118 (228)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.30  E-value=0.0033  Score=49.43  Aligned_cols=114  Identities=20%  Similarity=0.133  Sum_probs=70.4

Q ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhh
Q 027106           21 FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETD   96 (228)
Q Consensus        21 ~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~   96 (228)
                      ...+|+++.-..-..+++|.+||=.|  .|.|.+++-.++ +|+ +|++++-.+-..+.+++   ..+... ...... .
T Consensus       145 ~HpTT~lcL~~Le~~~~~g~~vlDvG--cGSGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~~~~-~  219 (300)
T COG2264         145 THPTTSLCLEALEKLLKKGKTVLDVG--CGSGILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVEL-LVQAKG-F  219 (300)
T ss_pred             CChhHHHHHHHHHHhhcCCCEEEEec--CChhHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCch-hhhccc-c
Confidence            34445544322223467999999999  667887777666 577 79999988776666553   223321 000000 0


Q ss_pred             HHHHHHHHCCCCccEEEcCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                        ........+.+|+|+.+.=.    .....+.+.++|+|++++.|...
T Consensus       220 --~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~  266 (300)
T COG2264         220 --LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE  266 (300)
T ss_pred             --cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence              00111122479999977633    26677889999999999999654

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=97.30  E-value=0.0049  Score=46.49  Aligned_cols=100  Identities=17%  Similarity=0.100  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee--------------eccChhhHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF--------------NYKEETDLKAAL  101 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~~~~~~~  101 (228)
                      +.++.+||+.|  .|.|.-++-+|. .|.+|++++.++.-.+.+..+.+.....              ..-.. ++.+. 
T Consensus        32 ~~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~-  106 (213)
T TIGR03840        32 LPAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFAL-  106 (213)
T ss_pred             CCCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCC-
Confidence            35778999999  677888888875 6999999999999888765344432100              00000 11000 


Q ss_pred             HHHCCCCccEEEcCcc---------hhHHHHHHHccccCcEEEEEeee
Q 027106          102 KRYFPDGIDIYFDNVG---------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .....+.||.|+|+..         ...++.+.++|+|||+++..+..
T Consensus       107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence            0000136899999653         12678899999999987776653

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK01581 speE spermidine synthase; Validated

Probab=97.30  E-value=0.0063  Score=49.31  Aligned_cols=97  Identities=13%  Similarity=0.071  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC--------C--CceeeccChhhHHHHHHHHC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG--------F--DDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~--~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ....+|||.|  ||.|.++..+++..+ .+|++++.+++-.+.++ ++.        .  +.-+...-. |..+.+.. .
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~  223 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P  223 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence            4456999999  567777777777655 49999999999889888 421        0  111111111 33444443 3


Q ss_pred             CCCccEEEcCcc------------hhHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFDNVG------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld~~g------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+.||+||--..            .+.+..+.+.|+++|.++.-.
T Consensus       224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            347999864321            126678889999999988854

>PLN03075 nicotianamine synthase; Provisional

Probab=97.30  E-value=0.0047  Score=48.70  Aligned_cols=98  Identities=11%  Similarity=-0.006  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCCCcc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      .++++|+-.| +|+.|+.++-+++..  +.+++.++.+++..+.+++.+..    ..-+..... +..+...  ..++||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~--~l~~FD  197 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTE--SLKEYD  197 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhccc--ccCCcC
Confidence            3788999999 699999888888654  34899999999988888843322    221222222 2222111  124799


Q ss_pred             EEEcCc------ch--hHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNV------GA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~------g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +||..+      ..  ..+..+.+.|+|||.++.-.
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            998764      22  38889999999999998854

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0018  Score=51.30  Aligned_cols=105  Identities=18%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      -++.++||+||+|++|..+++.+...|++|+++.++.+ ..+.+.+   ..|...   ..|..+.+.+...+.+...  +
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999888888999999887642 2222221   223221   1244433233333333211  3


Q ss_pred             CccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          108 GIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ++|+++.++|..                           ..+.+++.+++.|+++.++...
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            689999887631                           1122344556678999888654

>PRK04457 spermidine synthase; Provisional

Probab=97.29  E-value=0.014  Score=45.53  Aligned_cols=96  Identities=9%  Similarity=0.127  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCCCCccEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      .++.+||+.|  +|.|..+..+++.. +.+|++++.+++-.+.+++.++..   .-+..... |..+.+.+. ++.+|+|
T Consensus        65 ~~~~~vL~IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEEC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            4567899999  45577888887776 469999999999999998555531   11111112 444444432 3479998


Q ss_pred             E-cCcc----------hhHHHHHHHccccCcEEEE
Q 027106          113 F-DNVG----------AEMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       113 l-d~~g----------~~~~~~~~~~l~~~G~~v~  136 (228)
                      + |...          .+.++.+.+.|+++|.++.
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            6 3221          2477888999999999987

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=97.25  E-value=0.0061  Score=47.36  Aligned_cols=97  Identities=14%  Similarity=0.177  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .++.+||-.|  +|.|..+..+++. |.+|++++.+++..+.+++..   |...-+..-.. +..+ +.....+.||+|+
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~  117 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL  117 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence            5667999988  6778888888775 889999999999888887332   32111111111 2211 2222234799998


Q ss_pred             cCcc-----h--hHHHHHHHccccCcEEEEEe
Q 027106          114 DNVG-----A--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       114 d~~g-----~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ....     .  ..+..+.+.|+|||.++.+-
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            5432     2  37888999999999998764

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.24  E-value=0.0026  Score=45.59  Aligned_cols=88  Identities=10%  Similarity=0.080  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|+|.|| |.+|..-++.+...|++|++++  ++..+.+. +++... ...+   .+.+.    .-.++|+|+-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence            6789999996 9999988888888999999885  44444455 443211 1111   11111    1126899999998


Q ss_pred             hhHHHHHHHccccCcEEEEE
Q 027106          118 AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       118 ~~~~~~~~~~l~~~G~~v~~  137 (228)
                      .+.....+...+..+.++..
T Consensus        80 d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEEE
Confidence            87666655555444434443

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=97.24  E-value=0.039  Score=42.72  Aligned_cols=97  Identities=16%  Similarity=0.152  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ....++.+||-.|+ | .|..+..+++ .|.+|++++.+++..+.+++......++..    +... + .+.++.||+|+
T Consensus        38 l~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~  108 (251)
T PRK10258         38 LPQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAW  108 (251)
T ss_pred             cCccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEE
Confidence            34456789999994 3 3655555554 588999999999998888833322222211    1111 0 11223799998


Q ss_pred             cCcc-------hhHHHHHHHccccCcEEEEEee
Q 027106          114 DNVG-------AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       114 d~~g-------~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ....       ...+..+.+.|+++|.++....
T Consensus       109 s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        109 SNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             ECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            7543       1378888999999999988653

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.24  E-value=0.0039  Score=49.41  Aligned_cols=46  Identities=22%  Similarity=0.211  Sum_probs=35.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHh
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK---EKVTLLKDKL   83 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~---~~~~~~~~~~   83 (228)
                      -++++++|.|+ ||+|.+++..+...|+ +|+++.++.   ++.+.+.+++
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l  173 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI  173 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence            35789999997 8999999888888998 599999885   4554444344

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.24  E-value=0.0059  Score=48.16  Aligned_cols=46  Identities=22%  Similarity=0.201  Sum_probs=38.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~   83 (228)
                      .++++++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            45789999996 9999999988888998 8999999998887776444

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=97.23  E-value=0.016  Score=42.79  Aligned_cols=98  Identities=13%  Similarity=0.217  Sum_probs=64.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+.++++||=.|  +|.|..++.+++.. +.+|++++.+++..+.+++   .++...+ ..... +...    ...+
T Consensus        25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~----~~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPI----ELPG   96 (187)
T ss_pred             HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchh----hcCc
Confidence            455678899999998  45577777777765 4699999999988777763   2343322 11111 2111    1123


Q ss_pred             CccEEEcCcc----hhHHHHHHHccccCcEEEEE
Q 027106          108 GIDIYFDNVG----AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       108 ~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~  137 (228)
                      .+|+|+....    ...+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            6999985432    13677888999999999774

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0037  Score=47.31  Aligned_cols=77  Identities=14%  Similarity=0.233  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ..++||+||+|++|..++..+... .+|++++++.++.+.+.+......+  .|..+...+.+.+...  +++|+++.++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a   79 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA   79 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence            368999999999999988776666 9999999988776655523321122  2333332333322221  2699999988


Q ss_pred             ch
Q 027106          117 GA  118 (228)
Q Consensus       117 g~  118 (228)
                      |.
T Consensus        80 g~   81 (227)
T PRK08219         80 GV   81 (227)
T ss_pred             Cc
Confidence            73

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.22  E-value=0.0023  Score=51.12  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC-CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF-PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~-~~~~  109 (228)
                      +|.++||+||++++|...++.+...|++|++.+++ ....+.+.+   ..|...   ..|..+.+.....+.... .+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999998888889999988764 233322221   223211   123333312222222111 2479


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.21  E-value=0.0053  Score=48.17  Aligned_cols=96  Identities=17%  Similarity=0.120  Sum_probs=68.2

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||........+....---.|.+|+|.|.+..+|.-++.++...|++|+++.+...                     ++
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            456666666666644332358999999998666999999999999999998885421                     22


Q ss_pred             HHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.++     ..|+|+.++|.+ .+..  +.++++..++.+|.+.
T Consensus       196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            22222     379999999976 4443  4688888888888754

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=97.20  E-value=0.0055  Score=49.19  Aligned_cols=89  Identities=21%  Similarity=0.188  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|+++-|.| .|.+|.+.++.++..|++|+..++++. .+..+ +.+..++       ++.+.+.+     .|++.-..
T Consensus       144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~  208 (324)
T COG1052         144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC  208 (324)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence            3588999999 699999999999999999999998765 22222 4444432       22223332     68876555


Q ss_pred             c-hh-----HHHHHHHccccCcEEEEEeee
Q 027106          117 G-AE-----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       117 g-~~-----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      + .+     .-...+..|++++.+|.++..
T Consensus       209 Plt~~T~hLin~~~l~~mk~ga~lVNtaRG  238 (324)
T COG1052         209 PLTPETRHLINAEELAKMKPGAILVNTARG  238 (324)
T ss_pred             CCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence            4 22     335678899999999998753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.20  E-value=0.0024  Score=49.30  Aligned_cols=79  Identities=15%  Similarity=0.191  Sum_probs=49.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .++||+|++|++|..+++.+...|++|++++++. +..+...+.   .+.. .  ..|..+..++...+.+...  +++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999988888899999988653 222222112   2221 1  2344443233333333321  3689


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      +++.++|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99998763

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.20  E-value=0.0041  Score=48.85  Aligned_cols=74  Identities=23%  Similarity=0.297  Sum_probs=46.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----CCce--------eeccChhhHHHHHHHHCCC-
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLG----FDDA--------FNYKEETDLKAALKRYFPD-  107 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~--------~~~~~~~~~~~~~~~~~~~-  107 (228)
                      |||+||+|++|..+++-+...+. +++++++++.++-.++.++.    ...+        -|..+    .+.+.+.... 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence            79999999999998877777776 89999999888777665662    1111        12322    3344555554 


Q ss_pred             CccEEEcCcchh
Q 027106          108 GIDIYFDNVGAE  119 (228)
Q Consensus       108 ~~d~vld~~g~~  119 (228)
                      ++|+||.++.-.
T Consensus        77 ~pdiVfHaAA~K   88 (293)
T PF02719_consen   77 KPDIVFHAAALK   88 (293)
T ss_dssp             T-SEEEE-----
T ss_pred             CCCEEEEChhcC
Confidence            899999987743

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.19  E-value=0.0037  Score=48.76  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhC----CCc---eeeccChhhH----HHHHHHHC--
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKLG----FDD---AFNYKEETDL----KAALKRYF--  105 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~g----~~~---~~~~~~~~~~----~~~~~~~~--  105 (228)
                      .+++|+||++++|...++.+...|++|+++.+ ++++.+.+.+++.    ...   ..|..+.+..    .+.+....  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47899999999999999988889999998764 3444443332332    111   1244433121    11222211  


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      -+++|++++++|
T Consensus        82 ~g~iD~lv~nAG   93 (267)
T TIGR02685        82 FGRCDVLVNNAS   93 (267)
T ss_pred             cCCceEEEECCc
Confidence            136999999887

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.17  E-value=0.0033  Score=48.29  Aligned_cols=81  Identities=21%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++.++||+||+|++|..++..+...|++|+++.+ ++++.+...+.   .+...   -.|..+...+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999888888999887654 34443333212   23211   1244433233333333222  35


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|+++.++|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.17  E-value=0.0059  Score=44.19  Aligned_cols=97  Identities=20%  Similarity=0.124  Sum_probs=63.5

Q ss_pred             hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChh
Q 027106           17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGS-VGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEET   95 (228)
Q Consensus        17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~-~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   95 (228)
                      ...||....+...+.....--.|.+|+|.|+ |. +|..++..+...|++|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence            4456666666666655544568999999996 66 599899999999999888886532                     


Q ss_pred             hHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           96 DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        96 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +..+.+.     .+|+||.+++.+.+ ---+.++++-.++.++.+.
T Consensus        80 ~l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          80 NLKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             hHHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence            1122222     27888888887422 1123456665666676543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.16  E-value=0.0033  Score=48.17  Aligned_cols=80  Identities=25%  Similarity=0.302  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKD---KLGFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +..+|||+||+|++|..+++.+...|.+|+++.++.. ..+.+..   ..+.. .  ..|..+.+++.+.+.+...  ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            3569999999999999999999999999877665433 3222221   22221 1  1344443233333333211  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|+++.++|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999886

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.16  E-value=0.0056  Score=43.55  Aligned_cols=95  Identities=22%  Similarity=0.221  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .++.+++|+|+ |++|...++.+...| .+|++++++.++.+.+.++++... .....   +..+.     -+++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence            55789999996 999999998888886 689999999887776554666431 01111   11111     136899999


Q ss_pred             CcchhHH-----HHHHHccccCcEEEEEeee
Q 027106          115 NVGAEMQ-----EAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       115 ~~g~~~~-----~~~~~~l~~~G~~v~~g~~  140 (228)
                      |++....     ......++++..++.++..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            9876431     1112345677777777543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.16  E-value=0.0045  Score=49.85  Aligned_cols=75  Identities=13%  Similarity=0.114  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCc--e--eeccChhhHHHHHHHHCCCCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDD--A--FNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      +|.+|||+||+|.+|..+++.+...|  .+|++++++..+...+.+.+....  +  .|..+.+.+.+.+     +++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-----~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-----RGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-----hcCCE
Confidence            47899999999999999888777665  689888876655443332332211  1  2444331222222     14899


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      ||++++
T Consensus        78 Vih~Ag   83 (324)
T TIGR03589        78 VVHAAA   83 (324)
T ss_pred             EEECcc
Confidence            999876

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.16  E-value=0.0018  Score=55.25  Aligned_cols=73  Identities=15%  Similarity=0.162  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+.+|++|+|+|. |..|++++++++..|++|++++.++.+.+.++ +.|+.. +....   ..+.+.     .+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~~---~~~~l~-----~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTSD---AVQQIA-----DYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCcc---hHhHhh-----cCCEEEE
Confidence            3568899999994 99999999999999999999998777666666 677633 22211   111221     3789998


Q ss_pred             Ccch
Q 027106          115 NVGA  118 (228)
Q Consensus       115 ~~g~  118 (228)
                      +.|-
T Consensus        77 SpGi   80 (488)
T PRK03369         77 SPGF   80 (488)
T ss_pred             CCCC
Confidence            8774

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0029  Score=48.99  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HhCCC-c--eeeccChhhHHHHHHHHCC-
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS----KEKVTLLKD---KLGFD-D--AFNYKEETDLKAALKRYFP-  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~----~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~~~~~~~-  106 (228)
                      .+.++||+|++|++|..+++.+...|++|++++++    .+..+.+.+   ..+.. .  .+|..+.++..+.+.+... 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46799999999999999999888889987766532    222222221   22322 1  2344443233333333221 


Q ss_pred             -CCccEEEcCcch
Q 027106          107 -DGIDIYFDNVGA  118 (228)
Q Consensus       107 -~~~d~vld~~g~  118 (228)
                       +++|++++++|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence             368999998873

>PRK08317 hypothetical protein; Provisional

Probab=97.16  E-value=0.0049  Score=47.04  Aligned_cols=101  Identities=20%  Similarity=0.247  Sum_probs=67.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh--CCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL--GFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+.++++||..|+ | .|..+..+++..+  .++++++.++...+.++ +.  .....+..... +...  ..+..+
T Consensus        13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~-~~~~~~~~~~~~~~~-d~~~--~~~~~~   86 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAK-ERAAGLGPNVEFVRG-DADG--LPFPDG   86 (241)
T ss_pred             HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HHhhCCCCceEEEec-cccc--CCCCCC
Confidence            5578899999999994 4 4888888888773  59999999999888887 43  11111111111 1110  011234


Q ss_pred             CccEEEcCc-----ch--hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNV-----GA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~-----g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|+|+...     ..  ..+..+.++|+++|.++...
T Consensus        87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         87 SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            799887532     22  37888999999999998865

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=97.14  E-value=0.0095  Score=46.31  Aligned_cols=97  Identities=14%  Similarity=0.122  Sum_probs=66.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ....+.++++||-.|  .|.|..+..+++.. +.+|++++.++...+.+++.+....++..    +....   ...+.+|
T Consensus        25 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~~---~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIASW---QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhcc---CCCCCcc
Confidence            445678899999999  55677778888776 46999999999988888733322222221    22111   1123799


Q ss_pred             EEEcCcc-----h--hHHHHHHHccccCcEEEEE
Q 027106          111 IYFDNVG-----A--EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       111 ~vld~~g-----~--~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+....     .  ..+..+.+.|++||.++..
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9976433     1  3788899999999999885

>PRK06123 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.005  Score=47.30  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +.++||+|++|++|...++.+...|++|+.+. +++++.+.+.+   ..+...   ..|..+.+.+...+.+...  +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999988888899887765 44444333321   223321   1244443234443333222  368


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998863

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.13  E-value=0.0031  Score=47.19  Aligned_cols=92  Identities=9%  Similarity=0.023  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .|.+|||.|| |.+|...++.+...|++|++++.... .+..+. .-+... ....   .+...  .  -.++|+|+-++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i~-~~~~---~~~~~--~--l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKIR-WKQK---EFEPS--D--IVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCEE-EEec---CCChh--h--cCCceEEEEcC
Confidence            5789999996 99999988888889999998875421 222222 112111 1111   11110  0  12689999999


Q ss_pred             chhHHHHHHHccccCcEEEEEee
Q 027106          117 GAEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.+.....+...+..+.++....
T Consensus        79 ~d~elN~~i~~~a~~~~lvn~~d  101 (202)
T PRK06718         79 NDPRVNEQVKEDLPENALFNVIT  101 (202)
T ss_pred             CCHHHHHHHHHHHHhCCcEEECC
Confidence            88755555554444456666543

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0037  Score=47.48  Aligned_cols=74  Identities=15%  Similarity=0.180  Sum_probs=50.6

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Cce--eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           43 FVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--GF-DDA--FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        43 lI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~-~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ||+||+|++|...++.+...|++|+++++++++.+.+.+.+  +. ..+  .|..+.+.+.+.+.+.  +++|++++++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999888889999999999877765544233  22 111  3444442444434332  36899999886


Q ss_pred             h
Q 027106          118 A  118 (228)
Q Consensus       118 ~  118 (228)
                      .
T Consensus        79 ~   79 (230)
T PRK07041         79 D   79 (230)
T ss_pred             C
Confidence            3

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.12  E-value=0.0032  Score=48.41  Aligned_cols=78  Identities=21%  Similarity=0.164  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +++||+||+|++|..+++.+...|++|+++. +++++.+.+.+   ..+...   ..|..+..+..+.+.+..  -+++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            5899999999999999998888899887764 45444433321   223211   123333323433333322  13689


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +++.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9998886

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.12  E-value=0.0022  Score=51.10  Aligned_cols=38  Identities=11%  Similarity=0.256  Sum_probs=32.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSKEKV   76 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~   76 (228)
                      .|+++||+|+  ++|+|.+.++.+...|++|++ .++..++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            6899999999  799999999999999999988 4443433

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=97.12  E-value=0.0079  Score=46.91  Aligned_cols=102  Identities=17%  Similarity=0.177  Sum_probs=66.5

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC------CCceeeccChhhHHHHHHHH
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLG------FDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~  104 (228)
                      ..++.++++||-.|  .|.|..+..+++..+  .+|++++.+++.++.++++..      ...+ ..... +.. .+ .+
T Consensus        68 ~~~~~~~~~VLDlG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~-d~~-~l-p~  141 (261)
T PLN02233         68 WSGAKMGDRVLDLC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG-DAT-DL-PF  141 (261)
T ss_pred             HhCCCCCCEEEEEC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc-ccc-cC-CC
Confidence            35678899999998  455667777787765  499999999998888873332      1111 11111 111 00 11


Q ss_pred             CCCCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEeee
Q 027106          105 FPDGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       105 ~~~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .++.||+|+...+     .  ..++++.+.|+|||+++.+...
T Consensus       142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            1236999975432     1  3788999999999999987643

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0069  Score=44.99  Aligned_cols=87  Identities=17%  Similarity=0.209  Sum_probs=54.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-  119 (228)
                      +++|+|+++++|..++..+... .+|+++++++..           ..+|..+.++....+.+.  +++|++++++|.. 
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~   67 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAGKVH   67 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence            6899999999999888766655 889998876421           123444432333333332  3688888877631 


Q ss_pred             -------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          120 -------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       120 -------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                                               ..+.+.+.+.++|+++.++...
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence                                     1122334556678888877644

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.044  Score=40.07  Aligned_cols=89  Identities=16%  Similarity=0.154  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cc--e--eeccChhhHHHHHHHHC--CCCccEEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DD--A--FNYKEETDLKAALKRYF--PDGIDIYF  113 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~--~--~~~~~~~~~~~~~~~~~--~~~~d~vl  113 (228)
                      +++|+||+ ++|..+++.+...|++|+++++++++.+.+...++. ..  .  .|..+..+....+....  .+++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            68999986 566566666667899999999988777665523432 11  1  35555434444444332  23789999


Q ss_pred             cCcchhHHHHHHHcccc
Q 027106          114 DNVGAEMQEAAIANMNT  130 (228)
Q Consensus       114 d~~g~~~~~~~~~~l~~  130 (228)
                      +..-...-+......+.
T Consensus        81 ~~vh~~~~~~~~~~~~~   97 (177)
T PRK08309         81 AWIHSSAKDALSVVCRE   97 (177)
T ss_pred             EeccccchhhHHHHHHH
Confidence            88765433333344433

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=97.11  E-value=0.0039  Score=42.04  Aligned_cols=96  Identities=20%  Similarity=0.194  Sum_probs=61.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      |.+||-.|  .|.|..++.+++....++++++.++...+.++..+   +.+.-+..... ++.+.......+.+|+|+-+
T Consensus         1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            56788877  45566666666655579999999999988887433   22111222222 55444434444589999863


Q ss_pred             cch---------------hHHHHHHHccccCcEEEEE
Q 027106          116 VGA---------------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       116 ~g~---------------~~~~~~~~~l~~~G~~v~~  137 (228)
                      ..-               ..+..+.+.|+++|.++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            321               2477889999999999875

...

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.10  E-value=0.0027  Score=52.51  Aligned_cols=106  Identities=20%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHh-CCCc-eeeccChhhHHHHHHHHCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT------LLKDKL-GFDD-AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~  106 (228)
                      +-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+      ...+.. +... ..|..+.+.+...+... .
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~  134 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-G  134 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-C
Confidence            3456779999999999999999988888999999998765421      111011 2222 23444442344444332 1


Q ss_pred             CCccEEEcCcchh------H-------HHHHHHccccC--cEEEEEeeec
Q 027106          107 DGIDIYFDNVGAE------M-------QEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       107 ~~~d~vld~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                      +++|+|++|++..      .       ...+++.+...  +++|.++...
T Consensus       135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~  184 (390)
T PLN02657        135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC  184 (390)
T ss_pred             CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence            1699999987631      1       12334444333  4788887643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.10  E-value=0.004  Score=47.74  Aligned_cols=79  Identities=13%  Similarity=0.121  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +++||+||+|++|...++.+...|++|+++ .+++++.+....   ..+..   ...|..+.+.+...+.+..  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            479999999999999998888889998764 455554433321   22321   1234444424444444332  24799


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      +++.++|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99998873

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.09  E-value=0.0031  Score=47.29  Aligned_cols=92  Identities=17%  Similarity=0.124  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|--..+. .+   +...  .+  .++|+|+-++
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~---~~~~--dl--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RC---FDAD--IL--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CC---CCHH--Hh--CCcEEEEECC
Confidence            5789999996 99999999999999999999885432 333333 333211111 11   1111  11  2689999988


Q ss_pred             chh-HHHHHHHccccCcEEEEEee
Q 027106          117 GAE-MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~-~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.+ .-..+....+..|..+.+..
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEECC
Confidence            875 54555566666777776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.09  E-value=0.0056  Score=49.38  Aligned_cols=94  Identities=10%  Similarity=0.080  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHh----CCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYA-KLFGC-YVVGSAGSKEKVTLLKDKL----GFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ....+++|+| +|++|...+..+ ...++ +|.++++++++.+.+.+++    +.. +....   +..+.+.     ..|
T Consensus       125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD  194 (325)
T PRK08618        125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD  194 (325)
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence            3567899999 599998777554 45676 8889999988877665443    332 22222   3333332     489


Q ss_pred             EEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106          111 IYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       111 ~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|+.|++....... +++++|-++..+|...
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            99999987422223 8889999999998754

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.09  E-value=0.004  Score=50.83  Aligned_cols=81  Identities=15%  Similarity=0.104  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH--HH-------------H-HHHHHHhCCCc-e--eeccChh
Q 027106           37 KKGEKVFVSAASGSVGHL--VGQYAKLFGCYVVGSAGSK--EK-------------V-TLLKDKLGFDD-A--FNYKEET   95 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~--a~~~a~~~g~~V~~~~~~~--~~-------------~-~~~~~~~g~~~-~--~~~~~~~   95 (228)
                      ..|+++||+|+++++|++  .++.+ ..|++|++++...  .+             . +.++ +.|... .  .|..+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            456899999999999999  55666 8899888877322  11             2 2333 556431 1  2444432


Q ss_pred             hHHHHHHHHCC--CCccEEEcCcchh
Q 027106           96 DLKAALKRYFP--DGIDIYFDNVGAE  119 (228)
Q Consensus        96 ~~~~~~~~~~~--~~~d~vld~~g~~  119 (228)
                      .....+.+...  |++|+++++++.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            33333333222  4799999988754

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=97.07  E-value=0.0058  Score=46.64  Aligned_cols=102  Identities=13%  Similarity=0.143  Sum_probs=66.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+++|++||-.|  .|.|..+..+++..+  .+|++++.+++..+.+++.+   +.+.+ ..-.. +... + ....
T Consensus        39 ~~l~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~-~-~~~~  112 (231)
T TIGR02752        39 KRMNVQAGTSALDVC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNV-ELVHG-NAME-L-PFDD  112 (231)
T ss_pred             HhcCCCCCCEEEEeC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEEe-chhc-C-CCCC
Confidence            456778999999998  566777778887764  59999999998887777433   22221 11111 1111 0 1122


Q ss_pred             CCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.+|+|+-+..     .  ..+..+.+.|++||+++....
T Consensus       113 ~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       113 NSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            37999875322     1  367788999999999987653

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=97.06  E-value=0.0055  Score=47.50  Aligned_cols=43  Identities=28%  Similarity=0.291  Sum_probs=33.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHh
Q 027106           41 KVFVSAASGSVGHLVGQYAKL----FGCYVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~----~g~~V~~~~~~~~~~~~~~~~~   83 (228)
                      .++|+||++++|..++..+..    .|++|+.+.+++++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            589999999999887754433    6899999999888776655343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.06  E-value=0.007  Score=48.39  Aligned_cols=89  Identities=19%  Similarity=0.277  Sum_probs=61.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .+|.|+| .|.+|...++.++..|.  +|+++++++++.+.++ +.|...... .   +..+.+     ...|+|+.|+.
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~-~---~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT-T---SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec-C---CHHHHh-----cCCCEEEECCC
Confidence            5899999 59999999998888884  8999999998888887 777532111 1   111112     24799999988


Q ss_pred             hhH----HHHHHHccccCcEEEEEee
Q 027106          118 AEM----QEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~~~----~~~~~~~l~~~G~~v~~g~  139 (228)
                      ...    +......++++..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            643    3334455667776666664

>TIGR00477 tehB tellurite resistance protein TehB

Probab=97.06  E-value=0.0042  Score=46.20  Aligned_cols=99  Identities=16%  Similarity=0.084  Sum_probs=62.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ......++.+||-.|  .|.|..+..+++ .|.+|++++.++...+.+++.   .+..  +..... +...  ... ++.
T Consensus        24 ~~~~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~--~~~-~~~   94 (195)
T TIGR00477        24 EAVKTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA--AAL-NED   94 (195)
T ss_pred             HHhccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh--ccc-cCC
Confidence            444455667999998  567777777776 488999999998877766522   2322  111111 1110  011 236


Q ss_pred             ccEEEcCc-----ch----hHHHHHHHccccCcEEEEEee
Q 027106          109 IDIYFDNV-----GA----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       109 ~d~vld~~-----g~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +|+|+.+.     ..    ..+..+.++|+|||.++.+..
T Consensus        95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            99987542     11    377788899999999666543

Part of a tellurite-reducing operon tehA and tehB

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=97.06  E-value=0.01  Score=44.91  Aligned_cols=99  Identities=16%  Similarity=0.060  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--------------eeccChhhHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--------------FNYKEETDLKAA  100 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~  100 (228)
                      .+.++.+||+.|  .|.|.-++-+|. .|++|++++.++...+.+..+.+....              +..-.. ++.+.
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence            446778999999  678888888875 799999999999888876434443211              000000 11100


Q ss_pred             HHHHCCCCccEEEcCcc---------hhHHHHHHHccccCcEEEEEe
Q 027106          101 LKRYFPDGIDIYFDNVG---------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       101 ~~~~~~~~~d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                       .....+.||.|+|...         ...++.+.++|+|||+++++.
T Consensus       110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence             0001136899998553         126788899999998755543

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.06  E-value=0.0055  Score=48.46  Aligned_cols=96  Identities=22%  Similarity=0.275  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceee-ccChhhHHHHHHHHCCCCcc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFN-YKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..+|++||=.|  .|.|.+++-.++ +|+ +|++++.++...+.+++   ..|....+. .... +       ...+.||
T Consensus       159 ~~~g~~vLDvG--~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~-------~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVG--CGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D-------LVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES---TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C-------TCCS-EE
T ss_pred             ccCCCEEEEeC--CcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c-------cccccCC
Confidence            67899999999  566777666666 487 89999988876666653   233322221 1111 1       1124799


Q ss_pred             EEEcCcchh----HHHHHHHccccCcEEEEEeeecc
Q 027106          111 IYFDNVGAE----MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       111 ~vld~~g~~----~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|+-+.-.+    ....+.++++++|.+++.|....
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~  263 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPGGYLILSGILEE  263 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence            999777654    55556678999999999998653

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0042  Score=47.68  Aligned_cols=75  Identities=19%  Similarity=0.241  Sum_probs=48.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHH-----HCC-CCccE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKR-----YFP-DGIDI  111 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~-----~~~-~~~d~  111 (228)
                      ++||+||+|++|..+++.+...|++|++++++.++ +... ..+...   ..|..+.+++...+.+     +.. ++.|+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            79999999999999998888889999999877554 2222 334211   2344444233332222     122 26888


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        81 ~v~~ag   86 (243)
T PRK07023         81 LINNAG   86 (243)
T ss_pred             EEEcCc
Confidence            888766

>PRK00536 speE spermidine synthase; Provisional

Probab=97.04  E-value=0.0037  Score=48.51  Aligned_cols=96  Identities=13%  Similarity=-0.026  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-hCC-CceeeccChhhHHHHHHHHCCCCccEEE-
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK-LGF-DDAFNYKEETDLKAALKRYFPDGIDIYF-  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vl-  113 (228)
                      ...++|||.|  ||=|.++=.++|+-. +|+.++-+++-.+.++ + +.. ...++.... .+...+.+...+.||+|| 
T Consensus        71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k-~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIv  145 (262)
T PRK00536         71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFI-SFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIIC  145 (262)
T ss_pred             CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHH-HHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEE
Confidence            4458999999  666777788888864 9999999998888888 5 321 111221111 222233333334799965 


Q ss_pred             cCcch-hHHHHHHHccccCcEEEEE
Q 027106          114 DNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       114 d~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      |.+-. +.+..+.++|+++|.++.=
T Consensus       146 Ds~~~~~fy~~~~~~L~~~Gi~v~Q  170 (262)
T PRK00536        146 LQEPDIHKIDGLKRMLKEDGVFISV  170 (262)
T ss_pred             cCCCChHHHHHHHHhcCCCcEEEEC
Confidence            64544 5778889999999999984

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=97.04  E-value=0.015  Score=45.16  Aligned_cols=95  Identities=16%  Similarity=0.178  Sum_probs=66.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ....+.++++||-.|  .|.|..+..+++.. +.+|++++.++...+.++ +.+.+. +.   . +..+ +  ...+.||
T Consensus        23 ~~l~~~~~~~vLDlG--cG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~-~~---~-d~~~-~--~~~~~fD   91 (255)
T PRK14103         23 ARVGAERARRVVDLG--CGPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDA-RT---G-DVRD-W--KPKPDTD   91 (255)
T ss_pred             HhCCCCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcE-EE---c-Chhh-C--CCCCCce
Confidence            456678899999999  45577777887765 679999999999888887 554432 21   1 2211 1  1123799


Q ss_pred             EEEcCcc-----h--hHHHHHHHccccCcEEEEE
Q 027106          111 IYFDNVG-----A--EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       111 ~vld~~g-----~--~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+....     .  ..+..+.+.|+|||+++..
T Consensus        92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9987443     1  3778889999999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.03  E-value=0.0034  Score=50.48  Aligned_cols=38  Identities=18%  Similarity=0.261  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      .|.+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~   41 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD   41 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence            47899999999999999999888899999888766554

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=97.03  E-value=0.012  Score=48.01  Aligned_cols=95  Identities=14%  Similarity=0.102  Sum_probs=62.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHhCCCceeeccChhhHHHHHH-------------
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLF--GCYVVGSA--GSKEKVTLLKDKLGFDDAFNYKEETDLKAALK-------------  102 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------------  102 (228)
                      ++|.|.|+||++|..+++..+..  ..+|++.+  ++.+++....++++...++..++  .....++             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence            57999999999999999988765  45887765  45556555554888876654442  2122222             


Q ss_pred             -----HHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106          103 -----RYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       103 -----~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~  136 (228)
                           ++... .+|+|+.+.++ ..+.-.+.+++.|-++.+
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                 22222 58999998876 466667777766655544

>PRK14967 putative methyltransferase; Provisional

Probab=97.02  E-value=0.028  Score=42.71  Aligned_cols=97  Identities=22%  Similarity=0.158  Sum_probs=63.5

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...++++++||-.|+ |. |..++.+++. ++ +|++++.++...+.+++   ..+....+..  . ++.+.+   ..+.
T Consensus        31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~-d~~~~~---~~~~  101 (223)
T PRK14967         31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--G-DWARAV---EFRP  101 (223)
T ss_pred             hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--C-chhhhc---cCCC
Confidence            356788999999994 44 8888888875 65 99999999988876663   2333211111  1 332221   2247


Q ss_pred             ccEEEcCcc----------------------------hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFDNVG----------------------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld~~g----------------------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+.+.+                            ...+..+.+.|+++|+++.+-
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            999986521                            013456778999999998763

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=97.01  E-value=0.0042  Score=46.80  Aligned_cols=100  Identities=17%  Similarity=0.128  Sum_probs=63.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...+++++++||-.|  .|.|..+..+++.. .+|+.++.+++..+.+++.   +|...+ +.... +..+...  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEEC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCC
Confidence            457789999999998  44566666666654 4899999998877777643   343321 11111 2111110  1137


Q ss_pred             ccEEEcCcc-hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFDNVG-AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+.... ........+.|+++|+++..-
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence            999876443 345667789999999988743

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=97.01  E-value=0.019  Score=39.44  Aligned_cols=93  Identities=17%  Similarity=0.180  Sum_probs=53.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHHHHHHHhCCCceeeccCh--hhHHHH---------------
Q 027106           42 VFVSAASGSVGHLVGQYAKLFG--CYVVGSA--GSKEKVTLLKDKLGFDDAFNYKEE--TDLKAA---------------  100 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~--~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~---------------  100 (228)
                      |.|.|+||++|..+.++.+...  .+|++.+  ++-+.+....++|.+..++..++.  +.+...               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            6789999999999999999987  4787655  343444333327887776554432  011111               


Q ss_pred             -HHHHCC-CCccEEEcCcch-hHHHHHHHccccCcEE
Q 027106          101 -LKRYFP-DGIDIYFDNVGA-EMQEAAIANMNTYGRV  134 (228)
Q Consensus       101 -~~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~  134 (228)
                       +.+... ..+|+|+.+..+ ..+.-.+..++.+=++
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i  117 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI  117 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence             112222 267887776644 5666666666655443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.99  E-value=0.0051  Score=47.67  Aligned_cols=80  Identities=15%  Similarity=0.136  Sum_probs=49.4

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHH----HHHHhCCCc---eeeccChhh
Q 027106           37 KKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS-----------KEKVTL----LKDKLGFDD---AFNYKEETD   96 (228)
Q Consensus        37 ~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~-----------~~~~~~----~~~~~g~~~---~~~~~~~~~   96 (228)
                      -+|.++||+||+  +++|...+..+...|++|++++++           .++...    ++ +.|...   ..|..+.++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHH
Confidence            357899999997  489999998888899999887522           121111    22 334321   134444334


Q ss_pred             HHHHHHHHCC--CCccEEEcCcc
Q 027106           97 LKAALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        97 ~~~~~~~~~~--~~~d~vld~~g  117 (228)
                      ..+.+.+...  +.+|+++.++|
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCC
Confidence            4444443322  36899998876

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0052  Score=47.14  Aligned_cols=81  Identities=20%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG----SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~----~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--  105 (228)
                      ++.++||+||+|++|...++.+...|++|+++.+    +.+..+.+.++   .+...   ..|..+.+.....+.+..  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999888889999988654    33333333212   22221   123333323333332221  


Q ss_pred             CCCccEEEcCcch
Q 027106          106 PDGIDIYFDNVGA  118 (228)
Q Consensus       106 ~~~~d~vld~~g~  118 (228)
                      .+++|+++.++|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence            1368999998873

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.97  E-value=0.018  Score=37.27  Aligned_cols=86  Identities=17%  Similarity=0.162  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG---CYVVGS-AGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|.|.| +|.+|.+.++-....|   .+|+.+ .+++++.+.+.++++......     +..+.+.+     .|+||-|+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence            577888 5999999998888888   789855 999999988875777533221     22223332     69999999


Q ss_pred             chhHHHHHHHcc---ccCcEEEEE
Q 027106          117 GAEMQEAAIANM---NTYGRVAVC  137 (228)
Q Consensus       117 g~~~~~~~~~~l---~~~G~~v~~  137 (228)
                      ....+...++.+   .++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            876665555544   345555543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.97  E-value=0.008  Score=48.97  Aligned_cols=45  Identities=18%  Similarity=0.159  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      +-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+.+
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~   50 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL   50 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence            345678999999999999999999888999999988876654443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.95  E-value=0.0078  Score=49.75  Aligned_cols=91  Identities=21%  Similarity=0.199  Sum_probs=57.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHhCCC----ceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFG-C-YVVGSAGSKEKVTLLKDKLGFD----DAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      |+|.|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++...    ..+|..+.++    +.++.. +.|+|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence            789998 999999998888766 4 8999999999988776332221    1234443312    333322 36999999


Q ss_pred             cchh-HHHHHHHccccCcEEEEEe
Q 027106          116 VGAE-MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~g~~-~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|.. ...-+-.|+..+-.++..+
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred             CccchhHHHHHHHHHhCCCeeccc
Confidence            9875 4444555777788888843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.94  E-value=0.0053  Score=48.40  Aligned_cols=95  Identities=8%  Similarity=0.090  Sum_probs=61.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC-CC-ccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP-DG-IDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~-~d~vld~~g  117 (228)
                      +|||+||+|.+|..+++.+...|.+|.+.++++++..    ..+... ..|..+...+...++.... .+ +|.++.+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999988888999999999876532    223322 2455554244444432211 25 899987765


Q ss_pred             h-----hHHHHHHHccccCc--EEEEEee
Q 027106          118 A-----EMQEAAIANMNTYG--RVAVCGV  139 (228)
Q Consensus       118 ~-----~~~~~~~~~l~~~G--~~v~~g~  139 (228)
                      .     .....+++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            3     13334555555444  7887765

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.94  E-value=0.0021  Score=52.01  Aligned_cols=36  Identities=14%  Similarity=0.211  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            467999999999999999999998999999988654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.93  E-value=0.0053  Score=47.52  Aligned_cols=35  Identities=20%  Similarity=0.101  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      .+.++||+||+  |++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            46789999997  489999888887889999999876

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.008  Score=50.47  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=36.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGF   85 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~   85 (228)
                      +|.|+||+|.+|.+.+..++..|.+|+++++++++. +.+. ++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence            689999789999999999999999999999888775 3444 6665

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.92  E-value=0.007  Score=46.63  Aligned_cols=81  Identities=23%  Similarity=0.286  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhC-----CCce--eeccC-hhhHHHHHHHHCC-
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLG-----FDDA--FNYKE-ETDLKAALKRYFP-  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g-----~~~~--~~~~~-~~~~~~~~~~~~~-  106 (228)
                      .+.++||+|+++++|.+++..+...|++|+++.++.+.  .+.+.+...     ....  .|.++ .......+.+... 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999988877999998887766543  333331222     1111  34443 3233333333222 


Q ss_pred             -CCccEEEcCcch
Q 027106          107 -DGIDIYFDNVGA  118 (228)
Q Consensus       107 -~~~d~vld~~g~  118 (228)
                       +++|++++++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence             369999998873

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.92  E-value=0.016  Score=43.25  Aligned_cols=88  Identities=14%  Similarity=0.207  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -+|.+|+|.|. |.+|..+++.+...|++|++++.++++.+.+.+.+|.. .++..   ++       ....+|+++.|+
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l-------~~~~~Dv~vp~A   93 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EI-------YSVDADVFAPCA   93 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hh-------ccccCCEEEecc
Confidence            46789999995 99999999999999999999999988877776455643 23221   11       111588888665


Q ss_pred             ch-hHHHHHHHccccCcEEEEEe
Q 027106          117 GA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       117 g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+ ..-...++.++  .+++.-+
T Consensus        94 ~~~~I~~~~~~~l~--~~~v~~~  114 (200)
T cd01075          94 LGGVINDDTIPQLK--AKAIAGA  114 (200)
T ss_pred             cccccCHHHHHHcC--CCEEEEC
Confidence            44 33334445553  4455544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02686 cinnamoyl-CoA reductase

Probab=96.91  E-value=0.0082  Score=49.29  Aligned_cols=45  Identities=16%  Similarity=0.113  Sum_probs=37.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ...+++|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            356789999999999999999998889999998887766554443

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=96.91  E-value=0.011  Score=43.40  Aligned_cols=93  Identities=14%  Similarity=0.157  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +|++||-.|  .|.|..++.+++.. +.+|++++.+++..+.+++   +.|...+ ..-.. +..+ +  ...+.+|+|+
T Consensus        42 ~~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~-d~~~-~--~~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNG-RAED-F--QHEEQFDVIT  114 (181)
T ss_pred             CCCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEec-chhh-c--cccCCccEEE
Confidence            488999998  45566666666654 3599999999887666542   3454332 11111 2222 1  1124799988


Q ss_pred             cCcc-h--hHHHHHHHccccCcEEEEE
Q 027106          114 DNVG-A--EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       114 d~~g-~--~~~~~~~~~l~~~G~~v~~  137 (228)
                      ...- .  ..++.+.+.|+++|+++..
T Consensus       115 s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            6532 1  3667778999999999876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=96.91  E-value=0.0021  Score=41.29  Aligned_cols=82  Identities=21%  Similarity=0.239  Sum_probs=53.2

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCcc-----h--h
Q 027106           49 GSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNVG-----A--E  119 (228)
Q Consensus        49 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~g-----~--~  119 (228)
                      .|.|..+..+++.-+.+|++++.+++..+.+++......  +...+.. ++     .+.++.||+|+....     .  .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            457888888888856799999999999999984443322  2221111 11     112247999986432     1  3


Q ss_pred             HHHHHHHccccCcEEEE
Q 027106          120 MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       120 ~~~~~~~~l~~~G~~v~  136 (228)
                      .+.++.+.|+|+|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            78999999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.91  E-value=0.0078  Score=43.29  Aligned_cols=80  Identities=21%  Similarity=0.196  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeec-cChhhHHHHHHHHCCC-CccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-KEETDLKAALKRYFPD-GIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~d~vld~  115 (228)
                      .|..|+++|+.-|+|...++-+...|++|+++.++++.+..+- +.-...+... -+..++....+.+.+- .+|..+++
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            6889999999889999999999999999999999999887776 3333222211 1111333223333332 56777666


Q ss_pred             cch
Q 027106          116 VGA  118 (228)
Q Consensus       116 ~g~  118 (228)
                      +|-
T Consensus        85 Agv   87 (245)
T KOG1207|consen   85 AGV   87 (245)
T ss_pred             chh
Confidence            663

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.90  E-value=0.0091  Score=45.69  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhC---CC-c--eeeccChhhHHHHHHHHC--CCCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLG---FD-D--AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g---~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      +++||+|++|++|..+++.+...|++|++++++.. ......+.++   .. .  ..|..+.+.....+....  .+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999888888999999987743 1121211222   11 1  123333323333333221  13699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        83 ~vi~~ag   89 (245)
T PRK12824         83 ILVNNAG   89 (245)
T ss_pred             EEEECCC
Confidence            9999886

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.90  E-value=0.006  Score=46.59  Aligned_cols=89  Identities=25%  Similarity=0.319  Sum_probs=57.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc-
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG-  117 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g-  117 (228)
                      |+|+||+|.+|...++.+...+.+|.+.+|+..  ..+.++ ..|++.+ .|+.+.+.+.+.+    . |+|.||.+.+ 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al----~-g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAAL----K-GVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHH----T-TCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHH----c-CCceEEeecCc
Confidence            799999999999999999988889999998753  345556 6787433 2333322222222    2 6999998877 


Q ss_pred             --h---hHHHHHHHccccCc--EEEE
Q 027106          118 --A---EMQEAAIANMNTYG--RVAV  136 (228)
Q Consensus       118 --~---~~~~~~~~~l~~~G--~~v~  136 (228)
                        .   .....+.++...-|  +++.
T Consensus        75 ~~~~~~~~~~~li~Aa~~agVk~~v~  100 (233)
T PF05368_consen   75 SHPSELEQQKNLIDAAKAAGVKHFVP  100 (233)
T ss_dssp             SCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred             chhhhhhhhhhHHHhhhccccceEEE
Confidence              2   23344445554434  5553

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.89  E-value=0.014  Score=46.65  Aligned_cols=93  Identities=8%  Similarity=-0.022  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKL-FGC-YVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ....+++|+| +|.+|.+.+..+.. .+. +|.+..+++++.+.+.++++...+ +...   +..+.+.     +.|+|+
T Consensus       123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~---~~~~av~-----~aDiVi  193 (304)
T PRK07340        123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPL---DGEAIPE-----AVDLVV  193 (304)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEEC---CHHHHhh-----cCCEEE
Confidence            4567999999 59999998887764 565 899999999887776656643110 1111   3333332     589999


Q ss_pred             cCcch--hHHHHHHHccccCcEEEEEeeec
Q 027106          114 DNVGA--EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       114 d~~g~--~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .|+++  +.+..   .++||-++..+|...
T Consensus       194 taT~s~~Pl~~~---~~~~g~hi~~iGs~~  220 (304)
T PRK07340        194 TATTSRTPVYPE---AARAGRLVVAVGAFT  220 (304)
T ss_pred             EccCCCCceeCc---cCCCCCEEEecCCCC
Confidence            99886  35543   378999999999765

>PLN00016 RNA-binding protein; Provisional

Probab=96.89  E-value=0.0087  Score=49.30  Aligned_cols=95  Identities=19%  Similarity=0.250  Sum_probs=60.2

Q ss_pred             CCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHhCCCceeeccChhhHHHHHHH
Q 027106           39 GEKVFVS----AASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL-----------LKDKLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        39 g~~VlI~----ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      ..+|||+    ||+|-+|..++..+...|.+|++++++......           +. ..|...+.  .   +..+ +..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~--~---D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVW--G---DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEE--e---cHHH-HHh
Confidence            4589999    999999999999888889999999987654221           11 22332221  1   2222 222


Q ss_pred             HCCC-CccEEEcCcchh--HHHHHHHccccC--cEEEEEeee
Q 027106          104 YFPD-GIDIYFDNVGAE--MQEAAIANMNTY--GRVAVCGVI  140 (228)
Q Consensus       104 ~~~~-~~d~vld~~g~~--~~~~~~~~l~~~--G~~v~~g~~  140 (228)
                      .... ++|+|+++.+..  ....+++.++..  .++|.++..
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            2223 799999998742  345555665543  378877653

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=96.85  E-value=0.019  Score=48.11  Aligned_cols=104  Identities=15%  Similarity=0.156  Sum_probs=63.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH-CC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY-FP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~-~~  106 (228)
                      ....+++|++||=.|+  |.|..++.+++.++ .+|++++.++++++.+++   ++|....+..... +.. ..... ..
T Consensus       232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~-~~~~~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGR-GPSQWAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-ccc-cccccccc
Confidence            4456889999998883  44555556666555 699999999998877764   3455411111111 110 00001 12


Q ss_pred             CCccEEEc---Ccch--------------------------hHHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFD---NVGA--------------------------EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.||.|+-   |+|.                          ..+..+++.|++||+++....
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc  369 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC  369 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            36999873   4441                          255667889999999997543

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=96.85  E-value=0.0085  Score=42.56  Aligned_cols=99  Identities=22%  Similarity=0.295  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      +++.+||=.|  .|.|..+..+++..  +.++++++.+++..+.+++   +.+...+-... . ++.+ +....++.||+
T Consensus         2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~-~-d~~~-l~~~~~~~~D~   76 (152)
T PF13847_consen    2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQ-G-DIED-LPQELEEKFDI   76 (152)
T ss_dssp             TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEE-S-BTTC-GCGCSSTTEEE
T ss_pred             CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEE-e-ehhc-cccccCCCeeE
Confidence            5678899888  67777788888543  6799999999998888874   35655321111 1 2222 22111147999


Q ss_pred             EEcCc-----ch--hHHHHHHHccccCcEEEEEeee
Q 027106          112 YFDNV-----GA--EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       112 vld~~-----g~--~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+...     ..  ..++.+.++|+++|.++.....
T Consensus        77 I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~~  112 (152)
T PF13847_consen   77 IISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDPN  112 (152)
T ss_dssp             EEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEECC
Confidence            98753     22  3788899999999999886543

...

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.85  E-value=0.021  Score=43.55  Aligned_cols=90  Identities=19%  Similarity=0.240  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCC----HHH--------HHHHHHHhCCCceeeccChhhHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC---YVVGSAGS----KEK--------VTLLKDKLGFDDAFNYKEETDLKAAL  101 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~~~~~~----~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~  101 (228)
                      -++.+|+|.|+ |+.|..++..+...|+   ++++++++    .++        .++++ .++... .+   . ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence            46789999996 9999999988888897   58899987    343        22333 333211 11   1 233333


Q ss_pred             HHHCCCCccEEEcCcchhHH-HHHHHccccCcEEEEEe
Q 027106          102 KRYFPDGIDIYFDNVGAEMQ-EAAIANMNTYGRVAVCG  138 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g~~~~-~~~~~~l~~~G~~v~~g  138 (228)
                      .     ++|++|++++...+ ...++.+.++..++.+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     38999999974332 46667777776666554

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.84  E-value=0.017  Score=42.36  Aligned_cols=95  Identities=18%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccC--hhhHHHHHHHH------CCC-Cc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKE--ETDLKAALKRY------FPD-GI  109 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~--~~~~~~~~~~~------~~~-~~  109 (228)
                      +|.|.|+ |.+|...+.++...|.+|..++.+++.++.+++....  ........  .......+..+      ..- +.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~a   79 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVDA   79 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCTE
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhhh
Confidence            5889996 9999998888888899999999999887666532210  00000000  00111122111      111 78


Q ss_pred             cEEEcCcchh------HHHHHHHccccCcEEEE
Q 027106          110 DIYFDNVGAE------MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       110 d~vld~~g~~------~~~~~~~~l~~~G~~v~  136 (228)
                      |+|+++....      .+.++-+.++++-.+.+
T Consensus        80 dlViEai~E~l~~K~~~~~~l~~~~~~~~ilas  112 (180)
T PF02737_consen   80 DLVIEAIPEDLELKQELFAELDEICPPDTILAS  112 (180)
T ss_dssp             SEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE
T ss_pred             heehhhccccHHHHHHHHHHHHHHhCCCceEEe
Confidence            9999999753      55555556666665554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.84  E-value=0.0046  Score=50.15  Aligned_cols=34  Identities=15%  Similarity=0.241  Sum_probs=30.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~   34 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS   34 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence            4799999999999999999998999999998764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.83  E-value=0.014  Score=46.08  Aligned_cols=95  Identities=18%  Similarity=0.141  Sum_probs=66.3

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCceeeccChhh
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      -+||.....+..|....---.|++|.|+|-++.+|.-.+.++...|+.|+++. ++.+-                     
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l---------------------  195 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDL---------------------  195 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCH---------------------
Confidence            35666666666664333235899999999889999999999998999999985 33211                     


Q ss_pred             HHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                       .+.++     ..|+|+-++|.+ .+...  .+++|..++.+|...
T Consensus       196 -~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~  233 (296)
T PRK14188        196 -PAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGINR  233 (296)
T ss_pred             -HHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence             11111     268899888874 44433  388999999998654

>PRK04266 fibrillarin; Provisional

Probab=96.83  E-value=0.011  Score=45.08  Aligned_cols=100  Identities=14%  Similarity=0.108  Sum_probs=60.7

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Cc--eeeccChhhHHHHHHHHCCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF-DD--AFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...+++|++||=.|+  |.|..+..+++..+ .+|++++.+++.++.+.+.... ..  .+..+.. +. .....+ .+.
T Consensus        67 ~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~-~~-~~~~~l-~~~  141 (226)
T PRK04266         67 NFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR-KP-ERYAHV-VEK  141 (226)
T ss_pred             hCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC-Cc-chhhhc-ccc
Confidence            478899999999983  44555666677664 4899999999877655422111 11  1111111 10 000111 135


Q ss_pred             ccEEEcCcchh-----HHHHHHHccccCcEEEEE
Q 027106          109 IDIYFDNVGAE-----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vld~~g~~-----~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+.....+     .+..+.+.|+|||+++..
T Consensus       142 ~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        142 VDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             CCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            99998544321     367888899999999984

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.83  E-value=0.0058  Score=49.05  Aligned_cols=39  Identities=23%  Similarity=0.234  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV   76 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~   76 (228)
                      .|.+|||+||+|.+|..+++.+...|.+|+++.++..+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch
Confidence            478999999999999999988888899999888776543

>PRK07574 formate dehydrogenase; Provisional

Probab=96.82  E-value=0.0081  Score=49.41  Aligned_cols=89  Identities=12%  Similarity=0.106  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....+..+ .+|...   ..   ++.+.+.     ..|+|+.+..
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence            577999999 599999999999999999999997753333333 444321   11   2222222     3677777665


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...+..|+++..+|.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            2 2     12345677888877777764

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0082  Score=46.22  Aligned_cols=41  Identities=17%  Similarity=0.252  Sum_probs=33.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLK   80 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~   80 (228)
                      +++||+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            4799999999999999988888899999999876 4444333

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.82  E-value=0.009  Score=47.83  Aligned_cols=87  Identities=13%  Similarity=0.137  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++.+|++|++++++.++.+      +.....  ... ++.+.+.     ..|+|+.+.+
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence            678999999 699999999999999999999987543311      211111  111 3333332     3688887776


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|+++..+|.+|.
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            3 2     23456788888888888875

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.82  E-value=0.019  Score=45.46  Aligned_cols=78  Identities=14%  Similarity=0.191  Sum_probs=47.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCcc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK---EKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      -++.+++|.|+ ||.+.+++..+...|+ +|+++.|++   ++.+.+.++++...  .+.....++ ...+.+. -..+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~l~~~-~~~aD  198 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEA-LASAD  198 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh-hhhhhhh-cccCC
Confidence            36779999996 9999987776667887 899999984   45555553554311  111111101 1111111 12589


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +|++|+.
T Consensus       199 ivINaTp  205 (288)
T PRK12749        199 ILTNGTK  205 (288)
T ss_pred             EEEECCC
Confidence            9999886

>PLN03139 formate dehydrogenase; Provisional

Probab=96.81  E-value=0.0084  Score=49.28  Aligned_cols=89  Identities=26%  Similarity=0.260  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++.+|++|++.+++....+... +.|+...   .   ++.+.+.     ..|+|+.+.+
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE---E---DLDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec---C---CHHHHHh-----hCCEEEEeCC
Confidence            678999999 599999999999999999999987643333333 4554221   1   2222332     2577776665


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...+..|+++..+|.++.
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            2 1     22446678888887777764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.81  E-value=0.02  Score=45.12  Aligned_cols=79  Identities=15%  Similarity=0.073  Sum_probs=56.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      --.|++|+|.|+++-+|...+.++...|++|+++.+...   .+.                  +.+     ..+|+|+++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~------------------~~~-----~~aDIvI~A  209 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLP------------------ELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHH------------------HHh-----ccCCEEEEc
Confidence            358999999997445999999999999998888875211   111                  111     147999999


Q ss_pred             cchhHHHHHHHccccCcEEEEEeeec
Q 027106          116 VGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       116 ~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|.+.+ --.+.++++..++.+|...
T Consensus       210 tG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        210 VGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            986432 1135688888888888654

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.81  E-value=0.0094  Score=48.22  Aligned_cols=88  Identities=19%  Similarity=0.215  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|++|.|+| .|.+|...++.++..|++|++++++.... ... ..|...    .   ++.+.+.     ..|+|+-++.
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~----~---~l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAEY----R---PLEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCEe----c---CHHHHHh-----hCCEEEEeCC
Confidence            578999999 59999999999999999999999765432 222 344321    1   2222232     2578777665


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEeee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      . +     .-...+..|+++..++.++..
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg  242 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTARG  242 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcCc
Confidence            3 1     224567778888888877653

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=96.80  E-value=0.067  Score=38.33  Aligned_cols=120  Identities=15%  Similarity=0.029  Sum_probs=84.6

Q ss_pred             hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           16 VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        16 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      -|.+|....+|..+. ..-..+.|-.||=.|.  |.|...=.+++..-  ..++.+..+.+=...+.+.+...++++-+.
T Consensus        27 GaI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda  103 (194)
T COG3963          27 GAILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDA  103 (194)
T ss_pred             eeecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccch
Confidence            455666667777666 5677889999999994  33444444444332  378888988887777775666667777665


Q ss_pred             hhhHHHHHHHHCCCCccEEEcCcch---------hHHHHHHHccccCcEEEEEee
Q 027106           94 ETDLKAALKRYFPDGIDIYFDNVGA---------EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        94 ~~~~~~~~~~~~~~~~d~vld~~g~---------~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +....+.+..+..||+|+.+..-         ..++..+..++.||.++.+.-
T Consensus       104 ~-~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963         104 F-DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             h-hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            4 55555666555589999998762         277888899999999999763

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=96.80  E-value=0.013  Score=49.93  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ....++++++||-.|  .|.|..+..+++..+++|++++.+++..+.+++.. +...-+..... ++...  .+..+.||
T Consensus       260 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-d~~~~--~~~~~~fD  334 (475)
T PLN02336        260 DKLDLKPGQKVLDVG--CGIGGGDFYMAENFDVHVVGIDLSVNMISFALERAIGRKCSVEFEVA-DCTKK--TYPDNSFD  334 (475)
T ss_pred             HhcCCCCCCEEEEEe--ccCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHhhcCCCceEEEEc-CcccC--CCCCCCEE
Confidence            344578899999999  44466777788878999999999998888876322 22111111111 11110  11123699


Q ss_pred             EEEcCcc-------hhHHHHHHHccccCcEEEEEee
Q 027106          111 IYFDNVG-------AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       111 ~vld~~g-------~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +|+....       ...+..+.+.|+|||+++....
T Consensus       335 ~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~~  370 (475)
T PLN02336        335 VIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDY  370 (475)
T ss_pred             EEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9986322       1378899999999999987654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.79  E-value=0.0056  Score=45.96  Aligned_cols=104  Identities=20%  Similarity=0.280  Sum_probs=69.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Ccee----eccChhhHHHHHHHHCC--CC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DDAF----NYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~~----~~~~~~~~~~~~~~~~~--~~  108 (228)
                      |++++++|+.||+|+.....+...|+++.++..+.+..+... ++.+    ..++    |..+-.+.....++...  +.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            899999999999999999888899999988888887766655 5543    2221    22221244444444333  36


Q ss_pred             ccEEEcCcch---hHH---------------HHHHHcc-----ccCcEEEEEeeeccc
Q 027106          109 IDIYFDNVGA---EMQ---------------EAAIANM-----NTYGRVAVCGVISEY  143 (228)
Q Consensus       109 ~d~vld~~g~---~~~---------------~~~~~~l-----~~~G~~v~~g~~~~~  143 (228)
                      +|+++|.+|-   ..+               ..+++.+     .+||.++.+++..+.
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL  141 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL  141 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence            8999998873   122               2233333     367899999887664

>PLN02823 spermine synthase

Probab=96.77  E-value=0.029  Score=45.33  Aligned_cols=95  Identities=18%  Similarity=0.231  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC------ceeeccChhhHHHHHHHHCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD------DAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..++|||.|  ||-|..+..+++..+. +|++++.+++-.+.+++-++..      .-+..... |....++. .++.+|
T Consensus       103 ~pk~VLiiG--gG~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~-Da~~~L~~-~~~~yD  178 (336)
T PLN02823        103 NPKTVFIMG--GGEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIN-DARAELEK-RDEKFD  178 (336)
T ss_pred             CCCEEEEEC--CCchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEC-hhHHHHhh-CCCCcc
Confidence            457899999  5566667777776655 8999999999999998444321      11111111 44444433 344799


Q ss_pred             EEE-cCcc----h--------hHHH-HHHHccccCcEEEE
Q 027106          111 IYF-DNVG----A--------EMQE-AAIANMNTYGRVAV  136 (228)
Q Consensus       111 ~vl-d~~g----~--------~~~~-~~~~~l~~~G~~v~  136 (228)
                      +|| |...    +        +.++ .+.+.|+++|.++.
T Consensus       179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~  218 (336)
T PLN02823        179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVT  218 (336)
T ss_pred             EEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEE
Confidence            976 4221    1        2455 67889999999876

>PLN02928 oxidoreductase family protein

Probab=96.76  E-value=0.0093  Score=48.49  Aligned_cols=93  Identities=17%  Similarity=0.190  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----Cceee--ccChhhHHHHHHHHCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-----DDAFN--YKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~~~--~~~~~~~~~~~~~~~~~~~d  110 (228)
                      .|.+|.|+| .|.+|..+++.++.+|++|++++++..+.. .. .++.     ....+  .... ++.+.+.+     .|
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----aD  228 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEP-ED-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----AD  228 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhh-hh-hhccccccccccccccCccc-CHHHHHhh-----CC
Confidence            578999999 599999999999999999999987632211 11 1110     00000  0111 33333332     69


Q ss_pred             EEEcCcch-h-----HHHHHHHccccCcEEEEEee
Q 027106          111 IYFDNVGA-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       111 ~vld~~g~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +|+.+.+. +     .-...+..|+++..+|.++.
T Consensus       229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            98887763 2     33567889999999998874

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.75  E-value=0.018  Score=46.46  Aligned_cols=93  Identities=20%  Similarity=0.168  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAK-LFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~-~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      -.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.+++..+.++++...+.      ++.+.+     ...|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l-----~~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEAL-----PEADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHH-----ccCCEEEE
Confidence            467899999999999998887775 4565 8999999888887766455422211      222222     14899999


Q ss_pred             Ccchh-HHHHHHHccccCcEEEEEeee
Q 027106          115 NVGAE-MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       115 ~~g~~-~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +++.. .+..--..+++.-.++.++.+
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence            88863 221111344566566667654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.75  E-value=0.071  Score=42.87  Aligned_cols=85  Identities=13%  Similarity=0.137  Sum_probs=54.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----------hCCCc-----eeeccChhhHHHHHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----------LGFDD-----AFNYKEETDLKAALKRY  104 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----------~g~~~-----~~~~~~~~~~~~~~~~~  104 (228)
                      .+|.|.|+ |.+|...++.+...|.+|++.+.+++..+.+++.          .|...     -+....  ++.+.+   
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~--~l~~av---   81 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVA--TIEACV---   81 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecC--CHHHHh---
Confidence            58999995 9999998888888999999999988766544321          11100     000000  111111   


Q ss_pred             CCCCccEEEcCcchh------HHHHHHHccccCc
Q 027106          105 FPDGIDIYFDNVGAE------MQEAAIANMNTYG  132 (228)
Q Consensus       105 ~~~~~d~vld~~g~~------~~~~~~~~l~~~G  132 (228)
                        .+.|+|++++...      .+..+.+.++++.
T Consensus        82 --~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a  113 (321)
T PRK07066         82 --ADADFIQESAPEREALKLELHERISRAAKPDA  113 (321)
T ss_pred             --cCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence              2689999998752      5566666667665

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=96.75  E-value=0.0083  Score=45.61  Aligned_cols=74  Identities=16%  Similarity=0.223  Sum_probs=50.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      |||+||+|-+|..++..+...|..|+.+.++.........+.... ...|..+.+.+.+.+...   .+|+|+.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999988887766554443123321 123444442444444432   68999998764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK14968 putative methyltransferase; Provisional

Probab=96.74  E-value=0.01  Score=43.61  Aligned_cols=95  Identities=21%  Similarity=0.188  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCce-eeccChhhHHHHHHHHCCCCccE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDA-FNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ..++++||..|  .|.|..+..+++. +.+|++++.+++..+.+++.+   +.... +..... ++.+.   ...+.+|+
T Consensus        21 ~~~~~~vLd~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-d~~~~---~~~~~~d~   93 (188)
T PRK14968         21 DKKGDRVLEVG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRS-DLFEP---FRGDKFDV   93 (188)
T ss_pred             ccCCCEEEEEc--cccCHHHHHHHhh-cceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEec-ccccc---ccccCceE
Confidence            47888999998  5667777777776 889999999988877775332   22110 111111 22111   11226888


Q ss_pred             EEcCcc----------------------------hhHHHHHHHccccCcEEEEE
Q 027106          112 YFDNVG----------------------------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       112 vld~~g----------------------------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      |+-..+                            ...++.+.+.|+++|.++.+
T Consensus        94 vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~  147 (188)
T PRK14968         94 ILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLL  147 (188)
T ss_pred             EEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            874211                            11467788999999988765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.74  E-value=0.0098  Score=42.67  Aligned_cols=81  Identities=22%  Similarity=0.259  Sum_probs=57.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCceeeccC---hhhHHHHHHHHCC--CCcc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDDAFNYKE---ETDLKAALKRYFP--DGID  110 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~--~~~d  110 (228)
                      .+|-.-||+|+.+++|.+++..+...|+.|+..+...++. +.++ ++|-.-++.+.+   +++....+.....  |..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            4677789999999999999999888999999988655544 4455 898755543322   2244444433322  3689


Q ss_pred             EEEcCcch
Q 027106          111 IYFDNVGA  118 (228)
Q Consensus       111 ~vld~~g~  118 (228)
                      +.++|+|.
T Consensus        86 ~~vncagi   93 (260)
T KOG1199|consen   86 ALVNCAGI   93 (260)
T ss_pred             eeeeccce
Confidence            99999984

>TIGR00417 speE spermidine synthase

Probab=96.72  E-value=0.026  Score=44.27  Aligned_cols=98  Identities=15%  Similarity=0.079  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..+++||+.|+  |.|..+..+++.... ++++++.+++-.+.+++.+..      +.-++.... +..+.+.+ ..+.+
T Consensus        71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~-~~~~y  146 (270)
T TIGR00417        71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLAD-TENTF  146 (270)
T ss_pred             CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHh-CCCCc
Confidence            34569999994  445566666666544 899999998887877733311      011111111 33334433 23479


Q ss_pred             cEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106          110 DIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       110 d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+|+-...           .+.++.+.+.|+++|.++...
T Consensus       147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            99864221           135678889999999999863

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=96.71  E-value=0.047  Score=45.86  Aligned_cols=103  Identities=17%  Similarity=0.163  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++++|++||=.+  .+.|..+++++..+  +.+|++++.++.+++.+++   ++|...+-... . +.. .+.....
T Consensus       231 ~~l~~~~g~~VLD~c--agpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~-~-Da~-~l~~~~~  305 (431)
T PRK14903        231 LLMELEPGLRVLDTC--AAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKI-A-DAE-RLTEYVQ  305 (431)
T ss_pred             HHhCCCCCCEEEEeC--CCccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE-C-chh-hhhhhhh
Confidence            446789999998887  34455566666666  4599999999999988764   35554321111 1 211 1111123


Q ss_pred             CCccEEEc---Ccchh--------------------------HHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFD---NVGAE--------------------------MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.||.|+-   |+|..                          .+..+++.|++||.++....
T Consensus       306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC  367 (431)
T PRK14903        306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC  367 (431)
T ss_pred             ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            46999873   43321                          25677899999999876543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.70  E-value=0.015  Score=42.64  Aligned_cols=76  Identities=16%  Similarity=0.211  Sum_probs=42.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK-------EKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~-------~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ++||+|+.|++|...++.+...+. +++.+.++.       +..+.++ +.|..-   -.|..+.++..+.+.+...  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999988887776 899999882       1233344 445421   1233333233333333322  2


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      .++.||.++|
T Consensus        81 ~i~gVih~ag   90 (181)
T PF08659_consen   81 PIDGVIHAAG   90 (181)
T ss_dssp             -EEEEEE---
T ss_pred             Ccceeeeeee
Confidence            5677776665

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.69  E-value=0.017  Score=41.56  Aligned_cols=89  Identities=20%  Similarity=0.137  Sum_probs=56.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-  118 (228)
                      .+|-++| .|.+|...++-+...|.+|++.++++++.+.+. +.|+.. .  .   +..+.+.+     .|+||-|+.. 
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~-~--~---s~~e~~~~-----~dvvi~~v~~~   68 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEV-A--D---SPAEAAEQ-----ADVVILCVPDD   68 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEE-E--S---SHHHHHHH-----BSEEEE-SSSH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhh-h--h---hhhhHhhc-----ccceEeecccc
Confidence            3788999 599999998888888999999999999988888 666422 1  1   22223332     5888887765 


Q ss_pred             hHHHH------HHHccccCcEEEEEeeec
Q 027106          119 EMQEA------AIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       119 ~~~~~------~~~~l~~~G~~v~~g~~~  141 (228)
                      +....      ++..+.++..++.+++..
T Consensus        69 ~~v~~v~~~~~i~~~l~~g~iiid~sT~~   97 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPGKIIIDMSTIS   97 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred             hhhhhhhhhhHHhhccccceEEEecCCcc
Confidence            33333      344556666777666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=96.68  E-value=0.023  Score=47.88  Aligned_cols=101  Identities=20%  Similarity=0.297  Sum_probs=62.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++++|++||=.|  .|.|..++.+++..  +.+|++++.++++.+.+++   ++|...+ ..... +..+....+ .
T Consensus       244 ~~l~~~~g~~VLDlg--aG~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~-D~~~~~~~~-~  318 (444)
T PRK14902        244 PALDPKGGDTVLDAC--AAPGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKAL-DARKVHEKF-A  318 (444)
T ss_pred             HHhCCCCCCEEEEeC--CCCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeC-Ccccccchh-c
Confidence            445678999998887  34455555666655  3599999999998877763   3555432 21111 221111111 1


Q ss_pred             CCccEEEc---Ccch--------------------------hHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFD---NVGA--------------------------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+|+-   |+|.                          ..+..+++.|++||+++..
T Consensus       319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys  378 (444)
T PRK14902        319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS  378 (444)
T ss_pred             ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            46999863   3321                          2466778899999999853

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.67  E-value=0.0096  Score=45.34  Aligned_cols=77  Identities=22%  Similarity=0.271  Sum_probs=47.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCccEE
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      +||+|++|++|..+++.+...|++|++++++. ++.+...+   ..|..   ...|..+.....+.+....  .+++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999988888899999988764 33222211   33421   1234444323333232221  1368999


Q ss_pred             EcCcch
Q 027106          113 FDNVGA  118 (228)
Q Consensus       113 ld~~g~  118 (228)
                      +.++|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998874

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=96.67  E-value=0.057  Score=40.40  Aligned_cols=97  Identities=14%  Similarity=0.108  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHC-CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYF-PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~-~~~~d~v  112 (228)
                      ++.+||-.|  .|.|..+..+++.. +.+|++++.+++..+.+++.+   +...+- .... +..+.+.... ++.+|.|
T Consensus        40 ~~~~VLDiG--cGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~-d~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIG--FGKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCG-DAVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEc--cCCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEec-CHHHHHHHHcCccccceE
Confidence            678899998  55677777888765 458999999999888887433   333221 1112 3322333223 3478988


Q ss_pred             EcCcc---------------hhHHHHHHHccccCcEEEEEe
Q 027106          113 FDNVG---------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       113 ld~~g---------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +-...               ...++.+.+.|+|+|.++...
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence            75322               236888899999999998864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=96.66  E-value=0.011  Score=46.99  Aligned_cols=74  Identities=28%  Similarity=0.386  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCC-C-c--ee--eccChhhHHHHHHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK---VTLLKDKLGF-D-D--AF--NYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~-~-~--~~--~~~~~~~~~~~~~~~~~~~  108 (228)
                      .+.+|+|+||+|=+|...+..+...|++|.++.|+++.   .++++ ++.. . .  ++  |-.+...+...+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence            57899999999999999999999999999999998775   34566 5542 1 1  11  2222224444432     5


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      .|.||.++.
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            899988765

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=96.65  E-value=0.026  Score=43.68  Aligned_cols=98  Identities=11%  Similarity=0.166  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKL---FGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      +.++.+||-.|+  |.|..+..+++.   .++++++++.+++.++.+++.+   +...-+..... ++.    +...+.+
T Consensus        54 ~~~~~~vLDlGc--GtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~-d~~----~~~~~~~  126 (247)
T PRK15451         54 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DIR----DIAIENA  126 (247)
T ss_pred             CCCCCEEEEEcc--cCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC-Chh----hCCCCCC
Confidence            568899999994  446666667663   3679999999999888887443   22211222111 221    1112357


Q ss_pred             cEEEcCcc---------hhHHHHHHHccccCcEEEEEeee
Q 027106          110 DIYFDNVG---------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       110 d~vld~~g---------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+|+.+..         ...++.+.+.|+|||.++.....
T Consensus       127 D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~~  166 (247)
T PRK15451        127 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF  166 (247)
T ss_pred             CEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            88775422         13788899999999999998643

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.64  E-value=0.01  Score=49.16  Aligned_cols=76  Identities=18%  Similarity=0.295  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHH
Q 027106           37 KKGEKVFVSAA----------------SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAA  100 (228)
Q Consensus        37 ~~g~~VlI~ga----------------~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  100 (228)
                      -+|.+|||+||                +|.+|.+.++.+...|++|++++++.+ .+  . ..+. ..++..+.+++.+.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~-~~~~-~~~dv~~~~~~~~~  260 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--T-PAGV-KRIDVESAQEMLDA  260 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--C-CCCc-EEEccCCHHHHHHH
Confidence            47899999999                566999999999999999999986642 11  1 1122 23455554466666


Q ss_pred             HHHHCCCCccEEEcCcch
Q 027106          101 LKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus       101 ~~~~~~~~~d~vld~~g~  118 (228)
                      +.+.. +.+|+++.+++-
T Consensus       261 v~~~~-~~~DilI~~Aav  277 (399)
T PRK05579        261 VLAAL-PQADIFIMAAAV  277 (399)
T ss_pred             HHHhc-CCCCEEEEcccc
Confidence            65543 369999999885

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=96.63  E-value=0.037  Score=46.52  Aligned_cols=103  Identities=18%  Similarity=0.260  Sum_probs=63.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH--H
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR--Y  104 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~--~  104 (228)
                      ...++++|++||=.|  .|.|..+..+++.++  .+|++++.++++.+.+++   .+|...+.... . +.......  .
T Consensus       246 ~~l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~-~-D~~~~~~~~~~  321 (434)
T PRK14901        246 PLLDPQPGEVILDAC--AAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILA-A-DSRNLLELKPQ  321 (434)
T ss_pred             HHhCCCCcCEEEEeC--CCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEe-C-Chhhccccccc
Confidence            345678999998887  344555556666553  489999999998877753   46665422111 1 22111100  1


Q ss_pred             CCCCccEEE-c--Ccch--------------------------hHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYF-D--NVGA--------------------------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vl-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.||.|+ |  |+|.                          ..+..+++.|++||+++-..
T Consensus       322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst  384 (434)
T PRK14901        322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT  384 (434)
T ss_pred             ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            123699987 3  4441                          24677889999999988643

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.024  Score=44.50  Aligned_cols=96  Identities=19%  Similarity=0.095  Sum_probs=67.5

Q ss_pred             ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      -+||........| +..++ -.|++|+|.|.+..+|.-++.++...|++|+++.+...                     +
T Consensus       137 ~~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~  194 (285)
T PRK14189        137 FRPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------D  194 (285)
T ss_pred             CcCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------C
Confidence            3566655555556 33444 48999999998888899999999999999998653211                     2


Q ss_pred             HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.+.++     ..|+|+-++|.+.+-. -+.++++..++.+|...
T Consensus       195 l~~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~  233 (285)
T PRK14189        195 LAAHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHHHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence            222222     2699999998753322 27899999999999654

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=96.61  E-value=0.027  Score=42.47  Aligned_cols=102  Identities=21%  Similarity=0.160  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ....++.+||-.|+  |.|..+..+++..+  .++++++.++...+.+++.+....-+..... +..+..  ...+.+|+
T Consensus        35 ~~~~~~~~vldiG~--G~G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~--~~~~~~D~  109 (223)
T TIGR01934        35 IGVFKGQKVLDVAC--GTGDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQA-DAEALP--FEDNSFDA  109 (223)
T ss_pred             hccCCCCeEEEeCC--CCChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEec-chhcCC--CCCCcEEE
Confidence            44558899999983  44777778888776  4899999998888888743321110111111 222111  11237999


Q ss_pred             EEcCcc-------hhHHHHHHHccccCcEEEEEeee
Q 027106          112 YFDNVG-------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       112 vld~~g-------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+...+       ...++.+.+.|+++|+++.++..
T Consensus       110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  145 (223)
T TIGR01934       110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS  145 (223)
T ss_pred             EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence            875332       13778888999999999987753

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>PRK06849 hypothetical protein; Provisional

Probab=96.61  E-value=0.031  Score=46.26  Aligned_cols=95  Identities=14%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee----ccChhhHHHHHHHHCCC-CccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN----YKEETDLKAALKRYFPD-GIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~-~~d~v  112 (228)
                      ...+|||+|+..+.|+..++.++..|.+|++++..+.......  ..++..+.    ..+.+.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4579999998888999999999999999999997764433211  12222221    11222566666665544 79999


Q ss_pred             EcCcchh-HHHHHHHccccCcEE
Q 027106          113 FDNVGAE-MQEAAIANMNTYGRV  134 (228)
Q Consensus       113 ld~~g~~-~~~~~~~~l~~~G~~  134 (228)
                      +-+.... .+....+.++++.++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAYCEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCCcEE
Confidence            9877643 333334455555443

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.60  E-value=0.0049  Score=47.78  Aligned_cols=73  Identities=14%  Similarity=0.122  Sum_probs=50.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC-CCccEEEcCcch
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP-DGIDIYFDNVGA  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vld~~g~  118 (228)
                      +|||.||||- |..++..+...|.+|+++.+++...+.+. ..|...+.....  +-.+ +.++.. .++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~~-l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQE-LREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHHH-HHHHHHhcCCCEEEEcCCH
Confidence            7999998665 99988887788999999998887767766 565544432221  1111 323333 379999999874

This enzyme was found to be a monomer by gel filtration.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.60  E-value=0.035  Score=43.62  Aligned_cols=96  Identities=19%  Similarity=0.093  Sum_probs=68.6

Q ss_pred             ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      -.||.....+..| +..++ -.|++|+|.|-+..+|.-++.++...|+.|+++.+...                     +
T Consensus       138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~  195 (285)
T PRK10792        138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------N  195 (285)
T ss_pred             CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------C
Confidence            3567666666666 44444 47999999998788999999999999999998874311                     2


Q ss_pred             HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.+.++     ..|+++.++|.+.+-. -+.++++..++.+|...
T Consensus       196 l~~~~~-----~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~  234 (285)
T PRK10792        196 LRHHVR-----NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR  234 (285)
T ss_pred             HHHHHh-----hCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence            222222     3799999998753322 27889999999998543

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.58  E-value=0.04  Score=43.27  Aligned_cols=96  Identities=19%  Similarity=0.076  Sum_probs=66.9

Q ss_pred             ccchhHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           18 ILGFSGLTAYAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      -+||........| +..++ -.|++|+|.|.+..+|.-++.++...|+.|+++.....                     +
T Consensus       136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~  193 (285)
T PRK14191        136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D  193 (285)
T ss_pred             CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence            3466666666666 33444 47999999998779999999999999999988753221                     2


Q ss_pred             HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.+.++     ..|+|+-++|.+.+-. -+.+++|..++.+|...
T Consensus       194 l~~~~~-----~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        194 LSFYTQ-----NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             HHHHHH-----hCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence            222222     2689999888753311 34678999999998643

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=96.57  E-value=0.057  Score=45.31  Aligned_cols=101  Identities=17%  Similarity=0.256  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-C
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-P  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-~  106 (228)
                      ...++++|++||=.|+  |.|..+..+++..+ .+|++++.++++.+.+++.   +|....+...   +..+ ..... .
T Consensus       238 ~~l~~~~g~~VLDlga--G~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~---D~~~-~~~~~~~  311 (427)
T PRK10901        238 TLLAPQNGERVLDACA--APGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVG---DARD-PAQWWDG  311 (427)
T ss_pred             HHcCCCCCCEEEEeCC--CCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEc---Cccc-chhhccc
Confidence            3456789999998883  34445556666654 6999999999988877643   4442111111   1111 11111 2


Q ss_pred             CCccEEE-c--Ccch--------------------------hHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYF-D--NVGA--------------------------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vl-d--~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.||.|+ |  |.+.                          ..+..+.+.|+|||+++...
T Consensus       312 ~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst  372 (427)
T PRK10901        312 QPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT  372 (427)
T ss_pred             CCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            3699987 2  3331                          25677888999999998654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.57  E-value=0.0041  Score=47.39  Aligned_cols=37  Identities=16%  Similarity=0.219  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      ++.+++|+|+++++|...+..+...|++|+++++++.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~   40 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK   40 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4679999999999999999888888999999987643

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.56  E-value=0.014  Score=44.50  Aligned_cols=76  Identities=16%  Similarity=0.152  Sum_probs=46.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHC--CCCccEE
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      |||+||+|++|..+++.+...|++|++++++ +++.+.+.++   .+.. .  ..|..+.++....+.+..  .+++|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999988899999888754 3333333212   2321 1  234444323333333221  2368898


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            88766

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02214 cinnamoyl-CoA reductase

Probab=96.56  E-value=0.014  Score=47.38  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++.++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            357799999999999999999888899999999887553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	228
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		2e-72
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-71
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		3e-43
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		7e-43
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		6e-42
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		6e-42
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		2e-31
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		3e-31
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		7e-30
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		7e-27
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		4e-23
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		4e-23
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		5e-23
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		2e-10
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		1e-08
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		1e-08
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-08
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		5e-08
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-07
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		2e-07
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-07
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		7e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		8e-06
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		3e-05
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		8e-05
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		1e-04
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  268 bits (684), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/218 (58%), Positives = 161/218 (73%)
Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY  GILG  G+TAYAG  E+  PKKGE VFVSAASG+VG LVGQ+AK+ GCYVVGSA
Sbjct: 126 PLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSA 185
Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GSKEKV LLK K GFD+AFNYKEE DL AALKRYFPDGIDIYF+NVG +M +A + NM  
Sbjct: 186 GSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKL 245
Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           YGR+AVCG+IS+Y   +      +  +I KRI+ +GFL  D+ +LY  ++      +++G
Sbjct: 246 YGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAG 305
Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            +  +ED++ G+ES P+A  GLF G NIGK+VV ++ E
Sbjct: 306 KVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/218 (57%), Positives = 160/218 (73%)
Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLSY  G+LG  G+TAYAG +E+  PK+GE V+VSAASG+VG LVGQ AK+ GCYVVGSA
Sbjct: 128 PLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 187
Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GSKEKV LLK K GFDDAFNYKEE+DL AALKR FP+GIDIYF+NVG +M +A + NMN 
Sbjct: 188 GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNM 247
Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
           +GR+AVCG+IS+Y    +     + ++IYKR + QGF+ +D  + Y  F+     H+R G
Sbjct: 248 HGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREG 307
Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            I  +ED++DG+E  P A  GLF G N+GK+VV +  E
Sbjct: 308 KITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  171 bits (434), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 3/219 (1%)
Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL E+   K GE V VSAA+G+VG +VGQ AKL GC V
Sbjct: 114 PDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKV 173
Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+AGS EK+  LK ++GFD AFNYK    L+ ALK+  PDG D YFDNVG E     ++
Sbjct: 174 VGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLS 232
Query: 127 NMNTYGRVAVCGVISEYTDGKK-RAAPEMLDVIYKRIKFQGFLAADHL-NLYQDFISTTC 184
            M  +G++A+CG IS Y    +    P    +IYK+++ +GF+      ++ +  +    
Sbjct: 233 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM 292
Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
             +  G I   E ++ G E++P+AF  +  G N+GK VV
Sbjct: 293 KWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 128/223 (57%), Gaps = 2/223 (0%)
Query: 4   KFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG 63
           K DP   PL   +  LG +G+TAY  L ++G+PK GE V +S A+G+VG + GQ A+L G
Sbjct: 115 KVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKG 174
Query: 64  CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
           C VVG AG  EK   L ++LGFD A +YK E DL A LKR  P GID++FDNVG E+ + 
Sbjct: 175 CRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDT 233
Query: 124 AIANMNTYGRVAVCGVISEYTDGKK-RAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIST 182
            +  +    R+ +CG IS+Y + +  R     L ++  R + +G +  D+   + + +  
Sbjct: 234 VLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKE 293
Query: 183 TCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
               L  G +   EDI +G+E+ P     LF G N GK V+++
Sbjct: 294 MATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  167 bits (422), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL EI   K GE V V+AA+G+VG +VGQ AKL GC V
Sbjct: 130 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 189
Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+ GS EKV  L+ KLGFD  FNYK    L+  LK+  PDG D YFDNVG E     I 
Sbjct: 190 VGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 248
Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEMLD-VIYKRIKFQGFLAADHL-NLYQDFISTTC 184
            M  +GR+A+CG IS Y            + VIY+ ++ + F+      +  Q  +    
Sbjct: 249 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLL 308
Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
             +  G I   E I +G E++P+AF G+ +G N+GK +V+
Sbjct: 309 KWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 348

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  167 bits (422), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P   PLS  +G +G  GLTAY GL EI   K GE V V+AA+G+VG +VGQ AKL GC V
Sbjct: 109 PDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 168
Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           VG+ GS EKV  L+ KLGFD  FNYK    L+  LK+  PDG D YFDNVG E     I 
Sbjct: 169 VGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIG 227
Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEMLD-VIYKRIKFQGFLAADHL-NLYQDFISTTC 184
            M  +GR+A+CG IS Y            + VIY+ ++ + F+      +  Q  +    
Sbjct: 228 QMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLL 287
Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
             +  G I   E I +G E++P+AF G+ +G N+GK +V+
Sbjct: 288 KWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 327

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLT+  G+ E G    G  + + VS A+G+ G + GQ
Sbjct: 120 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ 179
Query: 58  YAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
                GC  VVG  G+ EK  LL  +LGFD A NYK++ ++   L+   P G+D+YFDNV
Sbjct: 180 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNV 238
Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP--EMLDVIYKR--IKFQGFLAADH 172
           G  + +  I+ MN    + +CG IS+Y        P    ++ I K   I  + FL  ++
Sbjct: 239 GGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY 298
Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            + ++  I       + G +   E + +G+E++ +AF  +  GGNIGK++V I+EE
Sbjct: 299 KDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLT+  G+ E G    G  + + VS A+G+ G + GQ
Sbjct: 115 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ 174
Query: 58  YAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
                GC  VVG  G+ EK  LL  +LGFD A NYK++ ++   L+   P G+D+YFDNV
Sbjct: 175 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNV 233
Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP--EMLDVIYKR--IKFQGFLAADH 172
           G  + +  I+ MN    + +CG IS+Y        P    ++ I K   I  + FL  ++
Sbjct: 234 GGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY 293
Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            + ++  I       + G +   E + +G+E++ +AF  +  GGNIGK++V I+EE
Sbjct: 294 KDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  127 bits (318), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLT+  G+ E G    G  + + VS A+G+ G L GQ
Sbjct: 116 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQ 175
Query: 58  YAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
              L GC  VVG  G++EK   L  +LGFD A NYK   ++   L+   P G+D+YFDNV
Sbjct: 176 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNV 234
Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTD--GKKRAAPEMLDVIYKR--IKFQGFLAADH 172
           G ++  A I+ MN    + +CG IS+Y++        P  ++ I K   I  + F   ++
Sbjct: 235 GGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNY 294
Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            + ++  I       + G +   E ++ G+E++  AF  +  GGN+GK++V I+E+
Sbjct: 295 KDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  117 bits (292), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLT+  G+ E G    G  +   VS A+G+ G L GQ
Sbjct: 126 LEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQ 185
Query: 58  YAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
              L GC  VVG  G++EK   L  +LGFD A NYK   ++   L+   P G+D+YFDNV
Sbjct: 186 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNV 244
Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTD--GKKRAAPEMLDVIYKR--IKFQGFLAADH 172
           G ++    I+  N    + +CG IS+Y          P  ++ I K   I  + F   ++
Sbjct: 245 GGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNY 304
Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            + ++  I       + G +   E ++ G+E+   AF     GGN+GK++V I+E+
Sbjct: 305 KDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           SG TAY  L E+G   +G+KV V+AA+G  G    Q +K   C+V+G+  S EK   LK 
Sbjct: 147 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206
Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG D   NYK E  +   LK+ +P+G+D+ +++VG  M + A+  + T GR+ V G IS
Sbjct: 207 -LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 264
Query: 142 EYTD----GKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED 197
            Y         +A      ++ K    QGF    +L+ YQ  +S       SG +    D
Sbjct: 265 GYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD 324
Query: 198 ISD--------GVESIPSAFTGLFQGGNIGKKVVRI 225
           + D        G+ESI  A   ++ G N GK VV +
Sbjct: 325 LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           SG TAY  L E+G   +G+KV V+AA+G  G    Q +K   C+V+G+  S EK   LK 
Sbjct: 126 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 185
Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG D   NYK E  +   LK+ +P+G+D+ +++VG  M + A+  + T GR+ V G IS
Sbjct: 186 -LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 243
Query: 142 EYTD----GKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED 197
            Y         +A      ++ K    QGF    +L+ YQ  +S       SG +    D
Sbjct: 244 GYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD 303
Query: 198 ISD--------GVESIPSAFTGLFQGGNIGKKVVRI 225
           + D        G+ESI  A   ++ G N GK VV +
Sbjct: 304 LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 339

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           SG TAY  L E+G   +G+KV V+AA+G  G    Q +K   C+V+G+  S EK   LK 
Sbjct: 155 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 214
Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG D   NYK E  +   LK+ +P+G+D+ +++VG  M + A+  + T GR+ V G IS
Sbjct: 215 -LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 272
Query: 142 EYTD----GKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED 197
            Y         +A      ++ K    QGF    +L+ YQ  +S       SG +    D
Sbjct: 273 GYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD 332
Query: 198 ISD--------GVESIPSAFTGLFQGGNIGKKVVRI 225
           + D        G+ESI  A   ++ G N GK VV +
Sbjct: 333 LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 368

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 11/201 (5%)
Query: 25  TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG 84
           T +A LF+     +GE V +   +  +G    Q A+ FG  V  +AGS  K     ++LG
Sbjct: 154 TVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC-ERLG 212
Query: 85  FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYT 144
                NY+ E D  A +K     G+DI  D +GA   E  IA++   G +++   +    
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV 271
Query: 145 DGKKRAAPEMLDVIYKRIKFQGF-----LAADHLNLYQDFISTTCNHLRSGAIYPLEDIS 199
             K   +P    +  KR+   G       A +   +  D +S     L +G + P+    
Sbjct: 272 AEKVNLSP----IXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKV 327
Query: 200 DGVESIPSAFTGLFQGGNIGK 220
              E +  A   L +G ++GK
Sbjct: 328 FAFEDVADAHRLLEEGSHVGK 348

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 25   TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG 84
            TAY  L   G+ + GE V + + SG VG      A   GC V  + GS EK   L+ +  
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 85   FDDAFNYKEETDL---KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
              D   +    D    +  L+     G+D+  +++  E  +A++  +  +GR    G   
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKF- 1772
Query: 142  EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLN----LYQDFISTTCNHLRSGAIYPLED 197
               D     A  M  V  K + F G L           +Q+        ++ G + PL+ 
Sbjct: 1773 ---DLSNNHALGMA-VFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKC 1828
Query: 198  ISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
                   + +AF  + QG +IGK V+++ EE
Sbjct: 1829 TVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L   G+TA   L +  K K G+ V + AA+G +GH++  +A+  G  V+G+  ++EK   
Sbjct: 126 LMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET 185
Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
            + KLG     NY  +   +   +     G+D+ +D++G +  + ++  +   G  A  G
Sbjct: 186 AR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYG 244
Query: 139 VISEYTD 145
             S   D
Sbjct: 245 HASGVAD 251

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA+  + +    + G+ V V AA   V     Q AKLFG  V+ +AGS++K+   K  L
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 84  GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEY 143
           G D+  NY      K   +     G D   D+ GA   E  I      GR+A+ G  S Y
Sbjct: 211 GADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY 270
Query: 144 TDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS--GAIYPLEDISDG 201
                 A      V Y+++   G   A    L+          L+   G + PLE  ++G
Sbjct: 271 EGTLPFA-----HVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEG 325

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 14  YQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK 73
           Y  G+L    LTA +   E    KKG+ V + AA+G VG ++ Q  K+ G + +  A + 
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 74  EKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGR 133
           EK+ + K+  G +   N  +E  L+  LK     G+D  FD+VG +  E ++A +   G 
Sbjct: 184 EKLKIAKE-YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 134 VA----VCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA-ADHLNLYQD----FISTTC 184
                   G+I  ++    R +P+ + ++  R +  G++A  +    Y D     +++  
Sbjct: 243 FVSFGNASGLIPPFSI--TRLSPKNITLV--RPQLYGYIADPEEWKYYSDEFFGLVNSKK 298
Query: 185 NHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
            +++    YPL D       I S  T       +GK V+ I +
Sbjct: 299 LNIKIYKTYPLRDYRTAAADIESRKT-------VGKLVLEIPQ 334

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P G  L+ Q   +  + LTA+  L  +G  + G+ V + A    VG    Q  ++ G   
Sbjct: 132 PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIP 190
Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           + +AGS++K+ +  +KLG    FNYK+E   +A LK     G+++  D +G    E  + 
Sbjct: 191 LVTAGSQKKLQM-AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVN 249
Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQD-----FIS 181
            +   GR  + G++     G     P    +++KR      L     N Y+      F  
Sbjct: 250 CLALDGRWVLYGLMG----GGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTE 305
Query: 182 TTCNHLRSGA---IYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
               H  +     + P+ D    V  I  A   +    NIGK V+ + +
Sbjct: 306 QILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 354

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           +G    TAY  L      K GE V V  ASG VG    Q A+ +G  ++G+AG++E   +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210
Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
           +    G  + FN++E   +    K     GIDI  + +        ++ ++  GRV V G
Sbjct: 211 VLQN-GAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
Query: 139 VISEYTDGKKRAAPEMLDVI------YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI 192
                    +    +   +I        + +FQ + AA    +   ++         G+ 
Sbjct: 270 SRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI-----GSQ 324
Query: 193 YPLEDISDGVESI 205
           YPLE +++  E+I
Sbjct: 325 YPLEKVAEAHENI 337

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 7   PMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           P G  L+ Q   +  + LTA+  L  +G  + G+ V + A    VG    Q  ++ G   
Sbjct: 116 PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIP 174
Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIA 126
           + +AGS++K+ +  +KLG    FNYK+E   +A LK     G+++  D +G    E  + 
Sbjct: 175 LVTAGSQKKLQM-AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVN 233
Query: 127 NMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQD-----FIS 181
            +   GR  + G++     G     P    +++KR      L     N Y+      F  
Sbjct: 234 CLALDGRWVLYGLMG----GGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTE 289
Query: 182 TTCNHLRSGA---IYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
               H  +     + P+ D    V  I  A   +    NIGK V+ + +
Sbjct: 290 QILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 338

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
           +++K + + F    Q   L  +GLTA   L +  + K+G+ V + A +G VGHL  Q AK
Sbjct: 119 IIQKLEKLSF---LQAASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAK 174
Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
             G  V+ +A SK     LK  LG +   NY EE  L A         +D   D VG ++
Sbjct: 175 QKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEEDFLLA-----ISTPVDAVIDLVGGDV 227
Query: 121 QEAAIANMNTYGRVA-----VCGVISEYTDGKKRAA 151
              +I  +   G +        G + E    K R A
Sbjct: 228 GIQSIDCLKETGCIVSVPTITAGRVIEVAKQKHRRA 263

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 2/178 (1%)
Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           Q   L   GLT    L +  + K GE +   AA+G VG L  Q+AK  G  ++G+  S E
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE 176
Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
           K    K  LG  +  +Y  E   K  L+        + +D VG +    ++ ++   G V
Sbjct: 177 KAAHAK-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLV 235
Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI 192
              G  S    G         D +Y      G  A +  NL Q       + L SG +
Sbjct: 236 VSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNL-QTMADELFDMLASGKL 292

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +    G + LTA+  L E+G+   GE+V + +A+G VG      AK+ G  +  +AGS  
Sbjct: 15  EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 74
Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
           K  +L  +LG +   + +        L+     G+D+  +++  E  +  +  +   GR 
Sbjct: 75  KREMLS-RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRF 133
Query: 135 AVCGVISEYTDGK 147
              G    Y D  
Sbjct: 134 IELGKKDVYADAS 146

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 21  FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80
             GLT Y  L +  + K  E+    AA+G VG +  Q+AK  G  ++G+ G+ +K     
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182
Query: 81  DKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYG 132
            K G     NY+EE DL   LK       + + +D+VG +  E ++  +   G
Sbjct: 183 -KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 233

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 16  VGILGFSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +G  GF+ +     L + G +P+ GE + V+ ASG VG          G  VV  +G + 
Sbjct: 145 IGTAGFTAMLCVMALEDAGVRPQDGE-IVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 203
Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
               LK  LG        E  + +   K+ +   ID   D V A++    +A MN  G V
Sbjct: 204 THEYLKS-LGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKV----LAQMNYGGCV 258
Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG 166
           A CG+   +T         ++  I + ++ QG
Sbjct: 259 AACGLAGGFT-----LPTTVMPFILRNVRLQG 285

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 52/245 (21%)
Query: 9   GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG 68
            FP+++         +TAY  LFE+   ++G  V V +A G VG  V Q         V 
Sbjct: 122 AFPMNF---------VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF 172
Query: 69  SAGSKEKVTLLKDKLG--FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAI- 125
              S  K   +KD +   FD   +Y +E      +KR   +G+DI  D +  +     + 
Sbjct: 173 GTASTFKHEAIKDSVTHLFDRNADYVQE------VKRISAEGVDIVLDCLCGDNTGKGLS 226
Query: 126 -------------ANMNT------------YGRVAVCGVISEYTDGKKRAAPEMLDVIYK 160
                        +NM T            + +V     I  Y + K  A   +L++++K
Sbjct: 227 LLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFK 286
Query: 161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGK 220
               QG        L +  +           I P+ D    +E +  A   +   GNIGK
Sbjct: 287 ----QG-----RAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGK 337
Query: 221 KVVRI 225
            ++ +
Sbjct: 338 LILDV 342

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	228
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-119
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-110
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-106
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-73
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	3e-30
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-27
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-26
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-24
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-24
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-23
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	6e-23
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	6e-23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	9e-23
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-22
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-22
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-22
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-22
4eye_A	342	Probable oxidoreductase; structural genomics, niai	5e-22
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-21
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	7e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	5e-20
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	9e-20
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-18
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-18
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-17
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-16
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-16
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	9e-15
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-14
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-14
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-13
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-11
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-10
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	5e-10
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	8e-10
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	9e-10
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-08
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-08
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	4e-08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	8e-08
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-07
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	5e-07
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	5e-07
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-07
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-06
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	3e-06
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-05
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	5e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  341 bits (878), Expect = e-119
 Identities = 126/228 (55%), Positives = 161/228 (70%)

Query: 1   MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK 60
              K      PLSY  G+LG  G+TAYAG +E+  PK+GE V+VSAASG+VG LVGQ AK
Sbjct: 118 AHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAK 177

Query: 61  LFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM 120
           + GCYVVGSAGSKEKV LLK K GFDDAFNYKEE+DL AALKR FP+GIDIYF+NVG +M
Sbjct: 178 MMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKM 237

Query: 121 QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFI 180
            +A + NMN +GR+AVCG+IS+Y    +     + ++IYKR + QGF+ +D  + Y  F+
Sbjct: 238 LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFL 297

Query: 181 STTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
                H+R G I  +ED++DG+E  P A  GLF G N+GK+VV +  E
Sbjct: 298 EFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  319 bits (820), Expect = e-110
 Identities = 94/225 (41%), Positives = 129/225 (57%), Gaps = 3/225 (1%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKL 61
           L    P   PLS  +G +G  GLTAY GL E+   K GE V VSAA+G+VG +VGQ AKL
Sbjct: 109 LLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKL 168

Query: 62  FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ 121
            GC VVG+AGS EK+  LK  +GFD AFNYK    L+ ALK+  PDG D YFDNVG E  
Sbjct: 169 KGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFL 227

Query: 122 EAAIANMNTYGRVAVCGVISEYTDGKKRAAPE-MLDVIYKRIKFQGFLAADHLN-LYQDF 179
              ++ M  +G++A+CG IS Y    +         +IYK+++ +GF+       + +  
Sbjct: 228 NTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKA 287

Query: 180 ISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
           +      +  G I   E ++ G E++P+AF  +  G N+GK VV 
Sbjct: 288 LRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  309 bits (793), Expect = e-106
 Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 10/236 (4%)

Query: 2   LRKFDP--MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQ 57
           L K DP  +   LSY +G +G  GLT+  G+ E G    G  + + VS A+G+ G + GQ
Sbjct: 120 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ 179

Query: 58  YAKLFGCY-VVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV 116
                GC  VVG  G+ EK  LL  +LGFD A NYK++ ++   L+   P G+D+YFDNV
Sbjct: 180 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNV 238

Query: 117 GAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE----MLDVIYKRIKFQGFLAADH 172
           G  + +  I+ MN    + +CG IS+Y        P           + I  + FL  ++
Sbjct: 239 GGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY 298

Query: 173 LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            + ++  I       + G +   E + +G+E++ +AF  +  GGNIGK++V I+EE
Sbjct: 299 KDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  226 bits (579), Expect = 1e-73
 Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 14/219 (6%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  SG TAY  L E+G   +G+KV V+AA+G  G    Q +K   C+V+G+  S EK   
Sbjct: 144 LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF 203

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
           LK  LG D   NYK E  +   LK+ +P+G+D+ +++VG  M + A+  + T GR+ V G
Sbjct: 204 LKS-LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIG 261

Query: 139 VISEYTD----GKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP 194
            IS Y         +A      ++ K    QGF    +L+ YQ  +S       SG +  
Sbjct: 262 FISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVC 321

Query: 195 LEDISD--------GVESIPSAFTGLFQGGNIGKKVVRI 225
             D+ D        G+ESI  A   ++ G N GK VV +
Sbjct: 322 EVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  113 bits (285), Expect = 3e-30
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 25/214 (11%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
            T +A LF++    +GE V +   +  +G    Q A+ FG  V  +AGS  K    +  L
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L 211

Query: 84  GFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEY 143
           G     NY+ E D  A +K     G+DI  D +GA   E  IA++   G +++   +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLG-- 268

Query: 144 TDGKKRAAPEMLDVIYKRIKFQGFL-----AADHLNLYQDFISTTCNHLRSGAI------ 192
             G       +  ++ KR+   G       A +   +  D +S     L +G +      
Sbjct: 269 --GAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 193 -YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            +  ED++D       A   L +G ++GK ++ +
Sbjct: 327 VFAFEDVAD-------AHRLLEEGSHVGKVMLTV 353

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  108 bits (271), Expect = 3e-28
 Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA A +F+I K +  +   ++A +  +  L+   AK  G   + +    E++ LLKD 
Sbjct: 150 PLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD- 207

Query: 83  LGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
           +G     N K   D +A L+         I+ D V   +  A    M    R  + G + 
Sbjct: 208 IGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD 266

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLN----LYQDFISTTCNHLRSGAI----- 192
                      E   +I++    +GF  ++ +          I         G       
Sbjct: 267 ----PDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVT 322

Query: 193 --YPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
              PL +    V                GK  +R
Sbjct: 323 AVVPLAEAIAWVP--------AELTKPNGKVFIR 348

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  106 bits (266), Expect = 2e-27
 Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 29/220 (13%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
           LTA+  L  +G  + G+ V + A    VG    Q  ++ G   + +AGS++K+ + +  L
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-L 206

Query: 84  GFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           G    FNYK+E D   A  ++    G+++  D +G    E  +  +   GR  + G++  
Sbjct: 207 GAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMG- 264

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQGFL-----AADHLNLYQDFISTTCNHLRSG------- 190
              G     P    +++KR      L           L   F      H  +        
Sbjct: 265 ---GGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP 321

Query: 191 ---AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
               IYP+ +I +       A   +    NIGK V+ + +
Sbjct: 322 VLDRIYPVTEIQE-------AHKYMEANKNIGKIVLELPQ 354

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  101 bits (255), Expect = 6e-26
 Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 21/208 (10%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA+  + +    + G+ V V AA   V     Q AKLFG  V+ +AGS++K+   K  
Sbjct: 151 FLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA- 209

Query: 83  LGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
           LG D+  NY    D    ++R     G D   D+ GA   E  I      GR+A+ G   
Sbjct: 210 LGADETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGA-- 266

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ--DFISTTCNHLRS--GAIYPLED 197
             + G +   P    V Y+++   G   A    L+    F+      L+   G + PLE 
Sbjct: 267 --SSGYEGTLP-FAHVFYRQLSILGSTMASKSRLFPILRFVEE--GKLKPVVGQVLPLEA 321

Query: 198 ISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            ++           L +    GK V+++
Sbjct: 322 AAE-------GHRLLEERRVFGKVVLQV 342

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 98.5 bits (246), Expect = 1e-24
 Identities = 45/244 (18%), Positives = 79/244 (32%), Gaps = 44/244 (18%)

Query: 9   GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG 68
            FP+++         +TAY  LFE+   ++G  V V +A G VG  V Q         V 
Sbjct: 122 AFPMNF---------VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF 172

Query: 69  SAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANM 128
              S  K   +KD          +   D    +KR   +G+DI  D +  +     ++ +
Sbjct: 173 GTASTFKHEAIKD-SV--THLFDRNA-DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLL 228

Query: 129 NTYGRVAVCGVISEYTDGKKRAAPE-----------MLDVIYKRIKFQGF------LAAD 171
              G   + G  +  T   K                 + +  +     GF          
Sbjct: 229 KPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQG 288

Query: 172 HLNLYQDFISTTCNHLRSGAI-------YPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
              L +  +           I       + LE++ +       A   +   GNIGK ++ 
Sbjct: 289 RAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKE-------AMQRIHDRGNIGKLILD 341

Query: 225 ITEE 228
           + + 
Sbjct: 342 VEKT 345

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 43/224 (19%), Positives = 84/224 (37%), Gaps = 31/224 (13%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           LG +  TAY  L +  + + G+ V  +A++  VG  V Q A   G   +     +  +  
Sbjct: 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 207

Query: 79  LKD---KLGFDDAFNYKEE--TDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGR 133
           L D    LG +     +E    ++K   K        +  + VG +     +  +   G 
Sbjct: 208 LSDRLKSLGAEHVITEEELRRPEMKNFFKD--MPQPRLALNCVGGKSSTELLRQLARGGT 265

Query: 134 VAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLN-----LYQDFISTTCNHLR 188
           +   G ++     +   A   L +I+K +K +GF  +          +++ I T C+ +R
Sbjct: 266 MVTYGGMA----KQPVVASVSL-LIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIR 320

Query: 189 SGAI-------YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            G +        PL+D          A     +     K+++ +
Sbjct: 321 RGQLTAPACSQVPLQDYQS-------ALEASMKPFISSKQILTM 357

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 95.0 bits (237), Expect = 3e-23
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 30/217 (13%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            +TA+ GL +  + + G+ V +    G VGH+  Q A   G  V  +A     +  ++D 
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVRD- 192

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE 142
           LG       +E  D  A        G D+ +D +G  + +A+ + +  +G V  C     
Sbjct: 193 LGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGT 250

Query: 143 YTDGKKRAAPEMLDVIYKRIKFQG------FLAADHLNLYQDFISTTCNHLRSGAI---- 192
                     ++  + +K+  + G       LA + L  + + +      +++G +    
Sbjct: 251 ---------HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRL 301

Query: 193 ----YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
               + + +I    +++             GK  + +
Sbjct: 302 DPRTFSIAEIGSAYDAVLGRND---VPRQRGKIAITV 335

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 94.2 bits (235), Expect = 6e-23
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 24/216 (11%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           +G    TAY  L      K GE V V  ASG VG    Q A+ +G  ++G+AG++E   +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRY-FPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137
           +    G  + FN++E  +    +K+Y    GIDI  + +        ++ ++  GRV V 
Sbjct: 211 VLQ-NGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 268

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQG-FLAADHLNLYQDFISTTCNHLRSGAI---- 192
           G                 D + K     G  L +     +Q + +     +  G +    
Sbjct: 269 GSRG-------TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI 321

Query: 193 ---YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
              YPLE +++  E+I      +   G  GK ++ +
Sbjct: 322 GSQYPLEKVAEAHENI------IHGSGATGKMILLL 351

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 94.9 bits (236), Expect = 6e-23
 Identities = 46/230 (20%), Positives = 69/230 (30%), Gaps = 38/230 (16%)

Query: 19  LGFSGLTAYAGLF--EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76
                 TAY  L      + K+G+ V +  ASG +G    Q+ K  G   V    S +K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258

Query: 77  TLLKDKLGFDDAFNYKEE-----------------TDLKAALKRYFPDGIDIYFDNVGAE 119
             ++  LG D   N  E                    L   +        DI F++ G  
Sbjct: 259 AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV 317

Query: 120 MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ-- 177
               ++      G V  CG  S Y         +   +  K  K  G   A+H       
Sbjct: 318 TFGLSVIVARRGGTVVTCGSSSGYL-----HTFDNRYLWMKLKKIVGSHGANHEEQQATN 372

Query: 178 DFISTTCNHLRS--GAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
               +    +     A+YPL +          A   +     +GK  V  
Sbjct: 373 RLFES--GAVVPAMSAVYPLAE-------AAEACRVVQTSRQVGKVAVLC 413

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 93.8 bits (234), Expect = 9e-23
 Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 25/212 (11%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  +GLTA+  L E G  + G++V V    G V     Q AK  G  V+ ++ S+EK+  
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137
               LG D   N  EE D    +     D G D   +  G      ++  +   GR++V 
Sbjct: 229 AF-ALGADHGINRLEE-DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFL---AADHLNLYQDFISTTCNHLRS--GAI 192
           GV+     G + + P +  ++ K    QG          +L    +      L+      
Sbjct: 287 GVLE----GFEVSGP-VGPLLLKSPVVQGISVGHRRALEDLVG-AVDR--LGLKPVIDMR 338

Query: 193 YPLEDISDGVESIPSAFTGLFQGGNIGKKVVR 224
           Y   ++ +       A       G  GK V+ 
Sbjct: 339 YKFTEVPE-------ALA-HLDRGPFGKVVIE 362

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 28/219 (12%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA+    E    ++ + + V+A   ++GHL  Q +++    ++    + +    L   
Sbjct: 129 PLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR- 187

Query: 83  LGFDDAFNYKEETDLKAALKRY-FPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
           LG     +      L   +       G D   D++G         ++   G     G++S
Sbjct: 188 LGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS 246

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLN-----LYQDFISTTCNHLRSGAI---- 192
               G +        V   ++    F      +      +Q+        + +  +    
Sbjct: 247 ----GIQ--VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK 300

Query: 193 ----YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE 227
               Y L D+   V+ + SA          GK  +   E
Sbjct: 301 VHSTYELADVKAAVDVVQSA------EKTKGKVFLTSYE 333

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 92.8 bits (231), Expect = 2e-22
 Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 23/217 (10%)

Query: 24  LTAYAGLFEIGKPKKGEKVFV-SAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVTL 78
           LTAY  L    K   G+  F+ +  + +VG    Q  KL     +     +    E V  
Sbjct: 152 LTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVAS 211

Query: 79  LKDKLGFDDAFNYKEE--TDLKAALKRYFPD---GIDIYFDNVGAEMQEAAIANMNTYGR 133
           LK+ LG        +    +    +K +         +  + VG +        +N  G 
Sbjct: 212 LKE-LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGL 270

Query: 134 VAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF----LAADHLNLYQDFISTTCNHLRS 189
           +   G +S     +    P  L  I+K     GF    L  ++  L    ++        
Sbjct: 271 MLTYGGMS----FQPVTIPTSL-YIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEE 325

Query: 190 GAIYPLEDIS---DGVESIPSAFTGLFQGGNIGKKVV 223
           G +   + I    DG + +   +         GK+++
Sbjct: 326 GKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 93.3 bits (232), Expect = 3e-22
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 38/230 (16%)

Query: 19  LGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76
            G    TAY  L        K+G+ V +  ASG +G    Q+A   G   +    S +K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266

Query: 77  TLLKDKLGFDDAFNYKEETDL-----------------KAALKRYFPDGIDIYFDNVGAE 119
            + +  +G +   +   E                    K   +    + IDI F++ G E
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325

Query: 120 MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ-- 177
              A++      G +  C   S Y         +   +     +  G   A++   ++  
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGYM-----HEYDNRYLWMSLKRIIGSHFANYREAWEAN 380

Query: 178 DFISTTCNHLRS--GAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
             I+     +      +Y LED          A   + +  + GK  V  
Sbjct: 381 RLIAK--GRIHPTLSKVYSLED-------TGQAAYDVHRNLHQGKVGVLC 421

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 52/208 (25%), Positives = 80/208 (38%), Gaps = 28/208 (13%)

Query: 22  SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD 81
           +GLTA   L    + K+G+ V + A +G VGHL  Q AK  G  V+ +A SK     LK 
Sbjct: 137 AGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA 194

Query: 82  KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            LG +   NY EE D   A+       +D   D VG ++   +I  +   G +     + 
Sbjct: 195 -LGAEQCINYHEE-DFLLAI----STPVDAVIDLVGGDVGIQSIDCLKETGCIV---SVP 245

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ--DFISTTCNHLRS--GAIYPLED 197
             T G+     +        +        +   L+     +S   + LR     I+ L +
Sbjct: 246 TITAGRVIEVAKQKHRRAFGL----LKQFNIEELHYLGKLVSE--DKLRIEISRIFQLSE 299

Query: 198 ISDGVESIPSAFTGLFQGGNIGKKVVRI 225
                     A   L  G   GK V ++
Sbjct: 300 AVT-------AHELLETGHVRGKLVFKV 320

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 91.1 bits (227), Expect = 5e-22
 Identities = 44/216 (20%), Positives = 73/216 (33%), Gaps = 26/216 (12%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  +  T Y      G+ + GE V V  A+G +G    Q AK  G  V+           
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVC 137
           +K  +G D     +E      A++      G+D+  D +G    + A+  + + GR+ V 
Sbjct: 200 VKS-VGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVV 256

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS-------- 189
           G  +    G          ++ +     G    + L  + D++  T   L          
Sbjct: 257 GFAA----GGIPTIKVNR-LLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRP 311

Query: 190 --GAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
              A  PL +          A      G   GK V+
Sbjct: 312 PVSARIPLSEGRQ-------ALQDFADGKVYGKMVL 340

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 90.2 bits (224), Expect = 2e-21
 Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 32/227 (14%)

Query: 19  LGFSGLTAYAGLFEIGK----PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           L +  LTA++ + ++G        G++V +  ASG VG    Q  K +  +V     S++
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD 218

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
              L++ KLG DD  +YK    ++  LK       D   DNVG   +  A   +  +   
Sbjct: 219 ASELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGA 274

Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNH-------- 186
               +++ +     R       +          L      ++  +     +         
Sbjct: 275 TYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAE 334

Query: 187 -LRSGAI-------YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            + +G I       +P   + +       AF  + +G   GK V+ +
Sbjct: 335 LVDAGKIRPVIEQTFPFSKVPE-------AFLKVERGHARGKTVINV 374

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 88.6 bits (220), Expect = 7e-21
 Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 27/233 (11%)

Query: 19  LGFSGLTAYAGLFEIGKP------------KKGEKVFVSAASGSVGHLVGQYAKLFGCYV 66
           L     TA   +  +G P             K   V V   S +   +  Q  +L G   
Sbjct: 133 LPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIP 192

Query: 67  VGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAI 125
           + +  S     L K   G ++ F+Y+   +L   ++ Y  + +    D +   E      
Sbjct: 193 IATC-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYALDCITNVESTTFCF 249

Query: 126 ANMNTYG-RVAVCGVISEYTDGKKRAAPEML---DVIYKRIKFQGFLAADHLNLYQDFIS 181
           A +   G          E+   +K    +      +  +   +            + F  
Sbjct: 250 AAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGE 309

Query: 182 TTCNH----LRSGAI--YPLEDISDGVESIPSAFTGLFQGGNIGKK-VVRITE 227
                    +  G +  +PL  +  G + I      + +G   G+K VVR+  
Sbjct: 310 DLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 85.7 bits (213), Expect = 5e-20
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 21  FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80
             G+TA   L +  K K G+ V + AA+G +GH++  +A+  G  V+G+  ++EK    +
Sbjct: 128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR 187

Query: 81  DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGV 139
            KLG     NY  + D    ++      G+D+ +D++G +  + ++  +   G  A  G 
Sbjct: 188 -KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGH 245

Query: 140 IS 141
            S
Sbjct: 246 AS 247

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 85.0 bits (211), Expect = 9e-20
 Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 18/189 (9%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA +   E    KKG+ V + AA+G VG ++ Q  K+ G + +  A + EK+ + K +
Sbjct: 133 VLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E 191

Query: 83  LGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS 141
            G +   N  +E D+   + ++    G+D  FD+VG +  E ++A +   G     G  S
Sbjct: 192 YGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTC---NHLRSGAI------ 192
                       +  +  K I         ++   +++   +      + S  +      
Sbjct: 251 GLIP-----PFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYK 305

Query: 193 -YPLEDISD 200
            YPL D   
Sbjct: 306 TYPLRDYRT 314

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 82.6 bits (205), Expect = 6e-19
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)

Query: 21  FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80
             GLT    L +  + K GE +   AA+G VG L  Q+AK  G  ++G+  S EK    K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182

Query: 81  DKLGFDDAFNYKEETDLKAALKRYFP-DGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGV 139
             LG  +  +Y  E D+   +          + +D VG +    ++ ++   G V   G 
Sbjct: 183 A-LGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240

Query: 140 IS 141
            S
Sbjct: 241 AS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 21  FSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK 80
             GLT Y  L +  + K  E+    AA+G VG +  Q+AK  G  ++G+ G+ +K     
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182

Query: 81  DKLGFDDAFNYKEETDLKAALKRYFP-DGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGV 139
            K G     NY+EE DL   LK       + + +D+VG +  E ++  +   G +   G 
Sbjct: 183 -KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN 240

Query: 140 IS 141
            S
Sbjct: 241 SS 242

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 10/120 (8%)

Query: 23  GLTAYAGLFEIGK------PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76
           G+TAY  LF++          +G+ + +   +G VG +  Q AK +G  V+ +A   E +
Sbjct: 129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI 188

Query: 77  TLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ-EAAIANMNTYGRVA 135
              K K+G D   N+KE   L    K    + +D  F     +M  +  I  +   G +A
Sbjct: 189 EWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIA 245

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 79.6 bits (196), Expect = 1e-17
 Identities = 38/202 (18%), Positives = 63/202 (31%), Gaps = 29/202 (14%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA  G+ E  + +    +  +AA+ ++G ++ Q     G  +V     +E+  LLK  
Sbjct: 157 PLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA- 214

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE---------MQEAAIANMNTYGR 133
            G     N    T ++   +     G  I FD  G           M+ A   +   Y R
Sbjct: 215 QGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSR 274

Query: 134 VAVCGVISEYTDGKKRAAPEMLDVIYKRIK-FQGFLAADHLNLY------------QDFI 180
                    Y  G    +P   +  +       G+L    L                  +
Sbjct: 275 YGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAEL 334

Query: 181 STTCNHLRS--GAIYPLEDISD 200
            TT     S       L ++ D
Sbjct: 335 KTT---FASHYSKEISLAEVLD 353

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 75.6 bits (187), Expect = 2e-16
 Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 31/217 (14%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
              S LTAY  L +  + + GEKV V AA+G++G    Q A+  G  V+ +A   EK+ L
Sbjct: 107 FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 165

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
               LG ++A  Y E    +A        G+D+  +  G E+ E ++  +   GR+   G
Sbjct: 166 PLA-LGAEEAATYAEV-PERAKAWG----GLDLVLEVRGKEV-EESLGLLAHGGRLVYIG 218

Query: 139 VISEYTDGKKRAAPEMLDVIYKRIKFQGF----------LAADHLNLYQDFISTTCNHLR 188
                  G+    P +  ++ + +   GF          L  + L      +      + 
Sbjct: 219 AAE----GEVAPIPPLR-LMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPV- 272

Query: 189 SGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI 225
            G ++P  +          AF  L   G+ GK VVR+
Sbjct: 273 VGPVFPFAEAEA-------AFRALLDRGHTGKVVVRL 302

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 10/120 (8%)

Query: 23  GLTAYAGLFEIGK-----PKKGEKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGSKEKV 76
            +TA+   F+        P     + +   +G VG +  Q A+      V+ +A   E  
Sbjct: 151 SITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210

Query: 77  TLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID-IYFDNVGAEMQEAAIANMNTYGRVA 135
             +K  LG     ++ +   L A +          ++      +        +   GR  
Sbjct: 211 EWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFC 267

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 71.1 bits (175), Expect = 9e-15
 Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 19/213 (8%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGSK 73
           +   L  SG+T Y  +         + + V  A G +G +  Q AK + G  ++G    +
Sbjct: 148 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE 206

Query: 74  EKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYG 132
           E V   K + G D   N   +  L    +     G+D   D   +E         +   G
Sbjct: 207 EAVEAAK-RAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQG 265

Query: 133 RVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ--DFISTTCNHLRSG 190
           +  + G+                 +    I+F G L  +  +                +G
Sbjct: 266 KYVMVGLFGADLH-----YH-APLITLSEIQFVGSLVGNQSDFLGIMRLA-------EAG 312

Query: 191 AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
            + P+   +  +E    A   L     IG++V+
Sbjct: 313 KVKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 39/220 (17%)

Query: 24  LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK- 82
           LTAY  L ++   + GE + V +A+G VG    Q A+  G  V  +A   +   +   + 
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSRE 390

Query: 83  -------LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVA 135
                    F+  F     T  +         G+D+  +++  E  +A++  +   GR  
Sbjct: 391 HLASSRTCDFEQQF--LGATGGR---------GVDVVLNSLAGEFADASLRMLPRGGRFL 439

Query: 136 VCGVISEYTDGKKRAAPEMLDV--IYKRIKFQGF-LAADHLNLYQDFISTTCNHLRSGAI 192
             G         K    + ++V   +  + +Q F           + +           +
Sbjct: 440 ELG---------KTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL 490

Query: 193 YPLE----DISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            PL     D+       P A   L Q  ++GK V+ +   
Sbjct: 491 EPLPVTAWDVRQ----APEALRHLSQARHVGKLVLTMPPV 526

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 69.1 bits (169), Expect = 8e-14
 Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 18/215 (8%)

Query: 24   LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK- 82
             TAY  L   G+ + GE V + + SG VG      A   GC V  + GS EK   L+ + 
Sbjct: 1653 TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF 1712

Query: 83   LGFDDA---------FNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGR 133
               D+          F   E+  L+    +    G+D+  +++  E  +A++  +  +GR
Sbjct: 1713 PQLDETCFANSRDTSF---EQHVLRHTAGK----GVDLVLNSLAEEKLQASVRCLAQHGR 1765

Query: 134  VAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY 193
                G      +     A  + +V +  I             +Q+        ++ G + 
Sbjct: 1766 FLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGG-ATWQEVSELLKAGIQEGVVQ 1824

Query: 194  PLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE 228
            PL+        + +AF  + QG +IGK V+++ EE
Sbjct: 1825 PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 14/113 (12%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
            LTA+   FE     K  +V +    G+V +L+ Q     G  V     +     L    
Sbjct: 128 LLTAWQA-FEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAAK- 183

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVA 135
            G    +    +                  FD V ++   A + ++   G + 
Sbjct: 184 RGVRHLYREPSQV----------TQKYFAIFDAVNSQNAAALVPSLKANGHII 226

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 24 LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL 83
          LTA+  L E+G+   GE+V + +A+G VG      AK+ G  +  +AGS  K  +L   L
Sbjct: 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L 82

Query: 84 GFDDAFN 90
          G +   +
Sbjct: 83 GVEYVGD 89

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 42/227 (18%), Positives = 87/227 (38%), Gaps = 31/227 (13%)

Query: 6   DPMGFPLSYQVGILGFSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGC 64
             +      ++  L  +G+TAY  + +       G  V +    G +GH+  Q  K+   
Sbjct: 153 KDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGG-LGHIAVQLLKVMTP 211

Query: 65  Y-VVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM-QE 122
             V+     +EK+ L + +LG D   + + +  +K  ++     G+++  D VG++   +
Sbjct: 212 ATVIALDVKEEKLKLAE-RLGADHVVDARRD-PVKQVMELTRGRGVNVAMDFVGSQATVD 269

Query: 123 AAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFIST 182
                +   GR+ + G       G +   P  + VI   + F+G L  +    Y +    
Sbjct: 270 YTPYLLGRMGRLIIVGY------GGELRFP-TIRVISSEVSFEGSLVGN----YVELH-E 317

Query: 183 TCNHLRSGAI------YPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
                  G +      + L++       I      L +G  +G+ V+
Sbjct: 318 LVTLALQGKVRVEVDIHKLDE-------INDVLERLEKGEVLGRAVL 357

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 35/209 (16%)

Query: 34  GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYK 92
              K G  V +    G +G L  Q A+L G   V+ S     K  L + ++G     +  
Sbjct: 178 SGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPS 235

Query: 93  EETDLKAALKRYF---PDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEYTDGKK 148
              D+  A+       P G+D+  +  G     + +       G V + GV        +
Sbjct: 236 AG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV----LPQGE 290

Query: 149 RAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI---------YPLEDIS 199
           +   E  D++++ ++  G                  + + +GAI           L++  
Sbjct: 291 KVEIEPFDILFRELRVLGSFINPF-----VHRRAA-DLVATGAIEIDRMISRRISLDEAP 344

Query: 200 DGVESIPSAFTGLFQGGNIGKKVVRITEE 228
           D + +  +            K +V  + E
Sbjct: 345 DVISNPAA--------AGEVKVLVIPSAE 365

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 56.8 bits (138), Expect = 8e-10
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 18/184 (9%)

Query: 34  GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYK 92
            +  + + V +  A G++G L  Q A   G   V     S EK+ L K   G    FN  
Sbjct: 156 AQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSS 213

Query: 93  EETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEYTDGKKRAA 151
           E +  +            +  +  G     E A+     + ++A+ G            +
Sbjct: 214 EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGT---LHQDLHLTS 270

Query: 152 PEMLDVIYKRIKFQG-FLAADHLNLYQDFISTTCNHLRSGAI---------YPLEDISDG 201
                ++ K +   G ++        Q++  T    L    +            E  +  
Sbjct: 271 ATFGKILRKELTVIGSWMNYSSPWPGQEW-ETASRLLTERKLSLEPLIAHRGSFESFAQA 329

Query: 202 VESI 205
           V  I
Sbjct: 330 VRDI 333

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+T Y  L        G  V +S A+G +G L  QYAK  G  V+G  G + K  L +  
Sbjct: 155 GITVYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 83  LGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ-EAAIANMNTYGRVAVCGVIS 141
           +G +   ++ +E D+  A+ +    G     +   +E   EA+   +   G   + G+ +
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPA 272

Query: 142 EYTDGKKRAAPEMLDVIYKRIKFQG 166
                      ++ + + K I   G
Sbjct: 273 GAKC-----CSDVFNQVVKSISIVG 292

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 26/208 (12%)

Query: 27  YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF 85
            A +   G  + G+ V +    G +G       K  G   V+ S  S+ +  L K +LG 
Sbjct: 202 NAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGA 259

Query: 86  DDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEY 143
           D   +  +E +   A+  Y    G  ++ +  G        I  +    R  +   ++  
Sbjct: 260 DHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRAR-GINATVAIV 317

Query: 144 TDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--------AIYPL 195
                +          +R +  G         +   IS     + SG            +
Sbjct: 318 ARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVIS----LMASGMDMTKIISKTVSM 373

Query: 196 EDISDGVESIPSAFTGLFQGGNIGKKVV 223
           E+I +           L    ++ K  +
Sbjct: 374 EEIPE-------YIKRLQTDKSLVKVTM 394

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 42/228 (18%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK 73
            + +   SG TAY    E  +   G+ V +  A G +G      A+  G   V+  AGS 
Sbjct: 172 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP 230

Query: 74  EKVTLLKDKLGFDDAFNYKEET--DLKAALKRYF-PDGIDIYFDNVG-AEMQEAAIANMN 129
            ++ L + ++G D   N +E +  + + A+       G D   +  G +         + 
Sbjct: 231 NRLKLAE-EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 289

Query: 130 TYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG--------------FLAADHLNL 175
             G  +V GV                 ++ K   F+G                + ++  L
Sbjct: 290 RGGFYSVAGVAV---PQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 346

Query: 176 YQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
               I+            PL++ +  +E        L +     K ++
Sbjct: 347 -SKLITHR---------LPLKEANKALE--------LMESREALKVIL 376

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 21/197 (10%)

Query: 36  PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEE 94
           P  G+ V ++ A G +G L    AK  G   V+ S  S  +  L K K+G D   N  EE
Sbjct: 165 PISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEE 222

Query: 95  TDLKAALKRYF-PDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEYTDGKKRAAP 152
            D+   +      +G+D++ +  GA    E  +  +   GRV++ G+        K    
Sbjct: 223 -DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLY-----PGKVTID 276

Query: 153 EMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED-IS---DGVESIPSA 208
               +I+K +   G         +          L+SG +  L+  I+    G +    A
Sbjct: 277 FNNLIIFKALTIYGITGRHLWETWYTVSR----LLQSGKL-NLDPIITHKYKGFDKYEEA 331

Query: 209 FTGLFQGGNIGKKVVRI 225
           F  L + G  GK V  +
Sbjct: 332 FE-LMRAGKTGKVVFML 347

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 15  QVGILGFSGLTAYAG---LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG 71
           +   +G +G TA      L E G   +   V V+ A+G VG L        G  V  S G
Sbjct: 123 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG 182

Query: 72  SKEKVTLLKDKLGFDDAFNYKE--ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMN 129
              +   L+  LG  +    ++     ++   K+ +   +D     VG       ++ M 
Sbjct: 183 KAAEHDYLR-VLGAKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGRTLATVLSRMR 237

Query: 130 TYGRVAVCG 138
             G VAV G
Sbjct: 238 YGGAVAVSG 246

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 24/181 (13%)

Query: 34  GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYK 92
           G    G+ V ++ A G +G +     +  G   ++ S  +  ++   +     D   N  
Sbjct: 160 GSGVSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPL 216

Query: 93  EETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAA 151
           EE DL   ++R    G+++  +  G E      +  +   G   + G+ S+         
Sbjct: 217 EE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-----PIRF 270

Query: 152 PEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI---------YPLEDISDGV 202
               +++ + I   G         +    +     + SG +          PL    +  
Sbjct: 271 DLAGELVMRGITAFGIAGRRLWQTWMQGTAL----VYSGRVDLSPLLTHRLPLSRYREAF 326

Query: 203 E 203
            
Sbjct: 327 G 327

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 26/200 (13%), Positives = 58/200 (29%), Gaps = 19/200 (9%)

Query: 32  EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY 91
                    KV V    G +G L     + +G  V  +   +     ++  +  +   NY
Sbjct: 174 CDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEETKTNY 230

Query: 92  KEETDLKAALKRYFPDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVISEYTDGKKR 149
              ++    LK       D+  D  GA+  +    I  +   G + + G  +  +     
Sbjct: 231 YNSSNGYDKLKDS-VGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDY 289

Query: 150 AAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGV------E 203
              +  ++++      G +       +Q  +     HL S      +     +       
Sbjct: 290 KTLQ--EIVHTNKTIIGLVNG-QKPHFQQAVV----HLASWKTLYPKAAKMLITKTVSIN 342

Query: 204 SIPSAFTGLFQGGNIGKKVV 223
                   L +  +   K+ 
Sbjct: 343 DEKELLKVLREKEHGEIKIR 362

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 47/222 (21%), Positives = 72/222 (32%), Gaps = 36/222 (16%)

Query: 15  QVGILGFSGLTAYAGLFEIGK--PKKGEKVFVSAASGSVGHLVGQYAK--LFGCYVVGSA 70
           +   L  +G T+   + +      K  E V +    G +     Q  K  +    +VG +
Sbjct: 144 EAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMN 129
            SK+       +LG D     K+   L   L      G  I  D VG E         + 
Sbjct: 204 RSKKHRDFAL-ELGADYVSEMKDAESLINKLTD--GLGASIAIDLVGTEETTYNLGKLLA 260

Query: 130 TYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQ--DFISTTCNHL 187
             G + + G+      GK+ +     D      K  G       +L              
Sbjct: 261 QEGAIILVGME-----GKRVSLE-AFDTAVWNKKLLGSNYGSLNDLEDVVRLS------- 307

Query: 188 RSGAI------YPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
            SG I       PL+D       I  AFT L +G   G++V+
Sbjct: 308 ESGKIKPYIIKVPLDD-------INKAFTNLDEGRVDGRQVI 342

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 48.3 bits (116), Expect = 5e-07
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+T Y GL      + G+ V +S   G +GH+  QYA+  G  V        K+ L + +
Sbjct: 152 GVTVYKGLKVTD-TRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-R 208

Query: 83  LGFDDAFNYKEETDLKAALKRYF--PDGI 109
           LG + A N ++  D  A L++      G+
Sbjct: 209 LGAEVAVNARDT-DPAAWLQKEIGGAHGV 236

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 32/219 (14%)

Query: 15  QVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGS 72
               L  +GLT Y  +  +      G    V    G +GH+  Q  +      V+     
Sbjct: 147 AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGG-LGHVGIQILRAVSAARVIAVDLD 205

Query: 73  KEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGAEM-QEAAIANMNT 130
            +++ L + ++G D A           A++      G    FD VGA+   + A   +  
Sbjct: 206 DDRLALAR-EVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAV 262

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
            G ++V G+           A     +I                   + +       R+G
Sbjct: 263 DGHISVVGI------HAGAHAKVGFFMIPFGASVVTPYWGT----RSELM-EVVALARAG 311

Query: 191 AI------YPLEDISDGVESIPSAFTGLFQGGNIGKKVV 223
            +      + L++        P+A+  L +G   G+ VV
Sbjct: 312 RLDIHTETFTLDE-------GPAAYRRLREGSIRGRGVV 343

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)

Query: 15  QVGILGFSGLTA---YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG 71
           +  + G +G TA      L + G   +   V V+ A+G VG +        G  VV S G
Sbjct: 124 EAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG 183

Query: 72  SKEKVTLLKDKLGFDDAFNYKE--ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMN 129
           ++E    LK +LG  +  + ++  +  LKA  K+ +   +    D VG +   + ++ + 
Sbjct: 184 NREAADYLK-QLGASEVISREDVYDGTLKALSKQQWQGAV----DPVGGKQLASLLSKIQ 238

Query: 130 TYGRVAVCG 138
             G VAV G
Sbjct: 239 YGGSVAVSG 247

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 23  GLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK 82
           G+T Y  L   G  K GE V +    G +GH+  QYAK  G  VV      EK+ L K +
Sbjct: 150 GVTTYKALKVTG-AKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E 206

Query: 83  LGFDDAFNYKEETDLKAALKR 103
           LG D   N  +E D    +K 
Sbjct: 207 LGADLVVNPLKE-DAAKFMKE 226

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 7   PMGFPLSYQVGILGFSGLTAYAGLF---EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG 63
           P G        I+G +G TA   +    + G   +  +V V+ ASG VG          G
Sbjct: 113 PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLG 171

Query: 64  CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEA 123
             V   +G +     LK  LG +   +  E  + +   K+ +   ID     VG ++   
Sbjct: 172 YQVAAVSGRESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAK 226

Query: 124 AIANMNTYGRVAVCG 138
            +A MN  G VA CG
Sbjct: 227 VLAQMNYGGCVAACG 241

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 27/183 (14%)

Query: 34  GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLKDKLGFDDAFNYK 92
           G    G KV V  A G +G +    AK  G   VV +  S  +++  K ++G D      
Sbjct: 167 GGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQIS 224

Query: 93  EET--DLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEYTDGKKR 149
           +E+  ++   ++       ++  +  GAE   +A I    + G + + G+      G + 
Sbjct: 225 KESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGL------GSEM 278

Query: 150 AAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI---------YPLEDISD 200
               +L    + +  +G         Y +      + L S ++         +PLE   +
Sbjct: 279 TTVPLLHAAIREVDIKGVFR------YCNTWPVAISMLASKSVNVKPLVTHRFPLEKALE 332

Query: 201 GVE 203
             E
Sbjct: 333 AFE 335

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 28/184 (15%)

Query: 34  GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNY-- 91
              + G  V V  A G +G +    AK +G +VV +A S  ++ + K   G D       
Sbjct: 164 AGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDP 221

Query: 92  --KEETDLKAALKRYFPDGIDIYFDNVGAEM-QEAAIANMNTYGRVAVCGVISEYTDGKK 148
             +EE+ +   ++    D  ++  D  G E      I    T G + + G+      G +
Sbjct: 222 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM------GSQ 275

Query: 149 RAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI---------YPLEDIS 199
                +++   + I  +        N Y   +      + SG           + LE   
Sbjct: 276 MVTVPLVNACAREIDIKSVFRYC--NDYPIALEM----VASGRCNVKQLVTHSFKLEQTV 329

Query: 200 DGVE 203
           D  E
Sbjct: 330 DAFE 333

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	228
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.98
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.98
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.97
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.97
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.97
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.97
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.97
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.96
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.23
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	99.19
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	99.17
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.97
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.81
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.81
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.8
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.76
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.7
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.65
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.62
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.59
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.59
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.53
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.51
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.48
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.48
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.43
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.42
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.42
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.41
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.39
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.38
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.38
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.38
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.37
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.37
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.36
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.36
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.35
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.35
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.35
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.35
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.35
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.34
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.34
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.34
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.33
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.33
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.33
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.32
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.32
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.31
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.3
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.3
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.3
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.29
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.29
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.29
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.29
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.28
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.28
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.28
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.27
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.27
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.27
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.27
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.26
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.26
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.26
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.26
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.26
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.26
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.25
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.25
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.25
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.25
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.24
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.24
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.24
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.23
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.23
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.22
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.22
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.22
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.22
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.22
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.22
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.22
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.21
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.21
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.21
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.2
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.2
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.2
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.2
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.2
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.2
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.2
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.2
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.2
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.2
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.2
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.19
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.19
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.19
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.19
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.19
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.19
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.18
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.18
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.18
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.17
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.17
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.17
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.16
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.16
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.16
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.16
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.16
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.16
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.16
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.15
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.15
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.15
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.15
1spx_A	278	Short-chain reductase family member (5L265); paral	98.15
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.15
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.14
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.14
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.14
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.14
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.14
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.13
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.13
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.13
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.12
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.12
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.12
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.12
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.12
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.12
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.12
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.12
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.12
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.12
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.11
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.11
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.11
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	98.11
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.1
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.1
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.09
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.09
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.08
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.08
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.07
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.07
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.07
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.07
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.06
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.06
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.06
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.06
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.06
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.05
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.05
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.05
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.04
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.04
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.04
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.03
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.03
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.03
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.03
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.02
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.02
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.02
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.02
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.01
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.0
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.99
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.99
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.98
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.98
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.98
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.98
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.97
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.97
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.97
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.96
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.95
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.95
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.95
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.93
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.92
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.92
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.91
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.91
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.91
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.89
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.89
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.89
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.89
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.88
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.88
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	97.86
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.86
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.85
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.85
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.85
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.84
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.84
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.84
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.83
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.82
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.82
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.82
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.82
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.81
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.81
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.81
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.8
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.8
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.8
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	97.8
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.8
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.8
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.8
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.79
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	97.79
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.78
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.78
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.77
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.77
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.76
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.76
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.76
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.76
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.75
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.75
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.75
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.74
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.74
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.73
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.73
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.72
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.72
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.71
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.71
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.71
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.71
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.7
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.69
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.69
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.68
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.67
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.67
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.67
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.66
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.65
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.65
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	97.64
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.64
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.63
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.62
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.62
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.61
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	97.6
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	97.6
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.59
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.59
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.58
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	97.57
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.57
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.56
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.56
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.56
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.55
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.54
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.53
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	97.53
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.52
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.51
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.51
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	97.51
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.51
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.5
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.5
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.5
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	97.5
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.5
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	97.49
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	97.49
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	97.48
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.48
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	97.47
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	97.47
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.47
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.46
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.45
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	97.44
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.42
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.41
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	97.4
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	97.4
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.4
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.4
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	97.4
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	97.4
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.4
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.38
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.37
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.37
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	97.37
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.36
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.35
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.35
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.35
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.35
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.34
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.34
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	97.34
3f4k_A	257	Putative methyltransferase; structural genomics, P	97.34
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.33
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.33
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	97.33
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.33
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	97.33
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.32
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.32
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.31
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.31
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	97.31
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	97.31
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.31
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.31
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.3
2i7c_A	283	Spermidine synthase; transferase, structural genom	97.3
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	97.3
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	97.29
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	97.29
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.29
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.28
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.28
3lpm_A	259	Putative methyltransferase; structural genomics, p	97.28
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.27
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.27
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	97.27
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.26
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	97.26
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.26
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.26
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.26
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.25
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.25
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.25
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.25
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	97.24
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.24
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	97.24
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.22
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	97.22
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	97.22
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.22
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.21
2pt6_A	321	Spermidine synthase; transferase, structural genom	97.21
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	97.21
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.21
2o07_A	304	Spermidine synthase; structural genomics, structur	97.2
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.2
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.2
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.19
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	97.19
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	97.19
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.18
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	97.18
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.18
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.17
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.17
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.17
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.17
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.16
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.16
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	97.15
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	97.15
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	97.15
3thr_A	293	Glycine N-methyltransferase; GNMT, folate, methylt	97.15
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	97.15
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.14
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	97.12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.12
3i9f_A	170	Putative type 11 methyltransferase; structural gen	97.11
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	97.11
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	97.11
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	97.1
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	97.1
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	97.09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.09
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.09
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.08
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	97.08
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.08
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	97.08
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	97.08
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.07
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	97.06
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	97.06
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.06
2fhp_A	187	Methylase, putative; alpha-beta-alpha sandwich, st	97.06

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=8.7e-36  Score=238.76  Aligned_cols=217  Identities=21%  Similarity=0.226  Sum_probs=192.4

Q ss_pred             cccCCCCCCCcchh---hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQ---VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. +   +|++++.++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++++.
T Consensus       111 ~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  188 (334)
T 3qwb_A          111 VMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI  188 (334)
T ss_dssp             EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             EEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            5788 9999999 7   788999999999999888899999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      ++ ++|++.++++++. ++.+.+.+.+++ ++|++|||+|++.++.++++++++|+++.+|...+.     ....+...+
T Consensus       189 ~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~  261 (334)
T 3qwb_A          189 AK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGL-----IPPFSITRL  261 (334)
T ss_dssp             HH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGG
T ss_pred             HH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhh
Confidence            98 9999999998876 889999998877 999999999999999999999999999999976532     224555667


Q ss_pred             Hhhhceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          158 IYKRIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ..+++++.++....+   +....+.++++++++.+|++++.++.+++++++++||+.+.+++..||+||++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          262 SPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             TTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             hhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            788999998766544   4445567899999999999999988899999999999999999999999999863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.5e-35  Score=236.32  Aligned_cols=221  Identities=38%  Similarity=0.695  Sum_probs=192.8

Q ss_pred             CcccCCCCCCCcchhh--hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQV--GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      .++++ |++++.. ++  |+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.
T Consensus       112 ~~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  189 (336)
T 4b7c_A          112 GFYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRF  189 (336)
T ss_dssp             TCEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             HeEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            36788 9998666 44  88999999999999888999999999999999999999999999999999999999999999


Q ss_pred             H-HHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHH
Q 027106           79 L-KDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLD  156 (228)
Q Consensus        79 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~  156 (228)
                      + + ++|++.++|+.+. ++.+.+.+.+++++|++|||+|++.+..++++++++|+++.+|...+.+.. ......+...
T Consensus       190 ~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  267 (336)
T 4b7c_A          190 LVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLS  267 (336)
T ss_dssp             HHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTH
T ss_pred             HHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHH
Confidence            9 6 9999999998876 888999988866999999999999999999999999999999976532100 1112455677


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++.+++++.++....+....++.++++++++++|++++.+..+++++++++||+.+.+++..||+||++
T Consensus       268 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          268 LLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            888999999998877644566889999999999999999888899999999999999999889999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=3.1e-35  Score=234.72  Aligned_cols=215  Identities=21%  Similarity=0.219  Sum_probs=188.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++++.++ 
T Consensus       106 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  182 (325)
T 3jyn_A          106 LVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-  182 (325)
T ss_dssp             EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-
T ss_pred             eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999999 888999999999999988899999999999999999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|++.+..++++++++|+++.+|...+.     ....+...+..+
T Consensus       183 ~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~  256 (325)
T 3jyn_A          183 ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGP-----VSGVNLGILAQK  256 (325)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTTCC-----CCSCCTHHHHHT
T ss_pred             HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCCCC-----CCCCCHHHHhhc
Confidence            9999999999876 899999999887 999999999999999999999999999999976532     124555666666


Q ss_pred             -hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 -RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                       ++.+.+.....+   +...++.++++++++.+|++++.+..++|++++++||+.+.+++..||+||++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          257 DSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             TSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             CcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence             566665544333   44556788899999999999999888999999999999999999999999974

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.3e-35  Score=239.40  Aligned_cols=216  Identities=25%  Similarity=0.407  Sum_probs=190.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++++.++ 
T Consensus       133 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  209 (353)
T 4dup_A          133 ILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-  209 (353)
T ss_dssp             EEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-
T ss_pred             cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999999 888999999999999988899999999999998999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|++.++++++. ++.+.+.+.+++++|++|||+|++.+..++++++++|+++.+|...+..    ....+...++.++
T Consensus       210 ~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~----~~~~~~~~~~~~~  284 (353)
T 4dup_A          210 RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGAV----AEKVNLSPIMVKR  284 (353)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTTCSE----EEEEECHHHHHTT
T ss_pred             hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecCCCc----ccCCCHHHHHhcC
Confidence            9999999998876 8888888888449999999999999999999999999999999765321    1125667888899


Q ss_pred             ceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          162 IKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       162 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +++.|+.....     .....+.++++++++++|++++.+..+++++++++||+.+.+++..||+||++
T Consensus       285 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          285 LTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             ceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999887654     12233458899999999999999989999999999999999999899999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-35  Score=238.68  Aligned_cols=213  Identities=18%  Similarity=0.224  Sum_probs=183.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus       125 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  201 (342)
T 4eye_A          125 ILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-  201 (342)
T ss_dssp             EEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-
T ss_pred             eEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999999 888999999999999988899999999999999999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.+++++ . ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+.     ....+...++.+
T Consensus       202 ~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~  274 (342)
T 4eye_A          202 SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLR  274 (342)
T ss_dssp             HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---------------CCCCGGGT
T ss_pred             hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhc
Confidence            99999999888 5 889999999988 999999999999999999999999999999975532     123344456778


Q ss_pred             hceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.++....+    ++..++.++.+.+++++| +++.++.+++++++++||+.+.+++..||+||++
T Consensus       275 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          275 NASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             TCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999886553    444567899999999999 9999989999999999999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.1e-35  Score=240.62  Aligned_cols=208  Identities=24%  Similarity=0.340  Sum_probs=188.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++++++++++++++ 
T Consensus       155 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-  230 (363)
T 3uog_A          155 FVAA-PKSLDAA-EASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-  230 (363)
T ss_dssp             EEEC-CTTSCHH-HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-
T ss_pred             eEEC-CCCCCHH-HHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-
Confidence            5788 9999999 88999999999999998889999999999999 799999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++|.... ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+.     ....+...++.+
T Consensus       231 ~lGa~~vi~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~  304 (363)
T 3uog_A          231 ALGADHGINRLEE-DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLK  304 (363)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHT
T ss_pred             HcCCCEEEcCCcc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhC
Confidence            9999999995545 888899998887 999999999988999999999999999999976532     124556778889


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.++....     ++.++++++++++|++++.++.+++++++++||+.+.+++ .||+||++
T Consensus       305 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          305 SPVVQGISVGH-----RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCEEEECCCCC-----HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             CcEEEEEecCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999998776     6789999999999999999999999999999999999999 89999985

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3.7e-34  Score=230.32  Aligned_cols=226  Identities=56%  Similarity=0.972  Sum_probs=188.2

Q ss_pred             cccCCCC-CCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPM-GFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~-~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+ ++++++++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++++.++
T Consensus       119 ~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~  197 (345)
T 2j3h_A          119 HFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK  197 (345)
T ss_dssp             CEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             eeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5678 64 455554588999999999999988899999999999999999999999999999999999999999999987


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      +++|++.++|+.+..++.+.+++.+++++|++||++|++.++.++++++++|+++.+|...+.+........+...++.+
T Consensus       198 ~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~  277 (345)
T 2j3h_A          198 TKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYK  277 (345)
T ss_dssp             HTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHH
T ss_pred             HHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhh
Confidence            46999888887653266777777775689999999999999999999999999999997654211111223445677889


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE  228 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~  228 (228)
                      ++++.|+....+....++.++++++++.+|++++.+..+++|+++++||+.+.+++..||+|++++++
T Consensus       278 ~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          278 RNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             TCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             ceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            99999887665444456779999999999999988777889999999999999998889999998764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.8e-34  Score=232.08  Aligned_cols=213  Identities=23%  Similarity=0.301  Sum_probs=182.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCC------CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPK------KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.++++      +|++|||+||+|++|++++|+|+..|++|+++++++++
T Consensus       110 ~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~  187 (346)
T 3fbg_A          110 VAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNET  187 (346)
T ss_dssp             EEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHH
T ss_pred             eEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            5788 9999999 88999999999999998889998      99999999889999999999999999999999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                      +++++ ++|+++++++++  ++.+.+++..++++|++|||+|++ .++.++++++++|+++.++...        ...+.
T Consensus       188 ~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~  256 (346)
T 3fbg_A          188 IEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDL  256 (346)
T ss_dssp             HHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCG
T ss_pred             HHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCcc
Confidence            99999 899999998874  677788887444999999999985 6799999999999999987432        23445


Q ss_pred             HHHHhhhceeeceecccc-------hhHHHHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEE
Q 027106          155 LDVIYKRIKFQGFLAADH-------LNLYQDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ..+..+++++.++.....       ....++.++++++++++|++++.+..++   +++++++||+.+.+++..||+||+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~  336 (346)
T 3fbg_A          257 NALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVIN  336 (346)
T ss_dssp             GGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred             ccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEe
Confidence            566678888887654431       2334678999999999999999888776   899999999999999999999999


Q ss_pred             ecC
Q 027106          225 ITE  227 (228)
Q Consensus       225 ~~~  227 (228)
                      +++
T Consensus       337 ~~~  339 (346)
T 3fbg_A          337 LNE  339 (346)
T ss_dssp             C--
T ss_pred             cCC
Confidence            875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=6.7e-34  Score=228.35  Aligned_cols=208  Identities=21%  Similarity=0.333  Sum_probs=185.0

Q ss_pred             CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      .++++ |+++++. ++|++++++.|||+++ +..++++|++|||+|+ |++|++++|+|+..|++|+++++++++.++++
T Consensus       132 ~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  207 (340)
T 3s2e_A          132 YVGLL-PDKVGFV-EIAPILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR  207 (340)
T ss_dssp             TSEEC-CTTSCHH-HHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HEEEC-CCCCCHH-HhhcccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            36789 9999999 8999999999999999 6789999999999996 99999999999999999999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++|+++. ++.+.+++ +.+++|++||++|+ +.++.++++++++|+++.+|...+      ....+...++.
T Consensus       208 -~lGa~~~i~~~~~-~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~  278 (340)
T 3s2e_A          208 -RLGAEVAVNARDT-DPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVL  278 (340)
T ss_dssp             -HTTCSEEEETTTS-CHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHH
T ss_pred             -HcCCCEEEeCCCc-CHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHh
Confidence             9999999999876 88888877 33489999999985 699999999999999999987542      23456778888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +++++.++....     ++.++++++++++|++++.+. .++++++++||+.+.+++..||+||++++
T Consensus       279 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          279 KGITIRGSIVGT-----RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             TTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             CCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999988876     578999999999999998654 56999999999999999999999999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=4.4e-34  Score=228.75  Aligned_cols=217  Identities=21%  Similarity=0.300  Sum_probs=187.4

Q ss_pred             cccCCCCCCCcchh--hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQ--VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. +  +|+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.+
T Consensus       109 ~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  186 (333)
T 1wly_A          109 LIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA  186 (333)
T ss_dssp             CEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             cEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            6789 9999999 7  8999999999999997788999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH-HH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML-DV  157 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~  157 (228)
                      + ++|++.++|.++. ++.+.+.+.+.+ ++|++|||+|+..++.++++++++|+++.+|...+.     ....+.. .+
T Consensus       187 ~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~  259 (333)
T 1wly_A          187 R-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDL  259 (333)
T ss_dssp             H-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHT
T ss_pred             H-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecCCCC-----cCCCChhHhh
Confidence            8 8999888888776 777888777765 899999999999999999999999999999975421     1234455 66


Q ss_pred             Hhhh--ceeeceecccc--hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          158 IYKR--IKFQGFLAADH--LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.++  +++.|++...+  +...++.++++++++.+|++++.++.++|++++++||+.+.+++..||+++++++
T Consensus       260 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          260 GVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             TTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             hhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            6788  88888754221  3333568999999999999999888899999999999999998888999998754

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.1e-34  Score=239.52  Aligned_cols=212  Identities=20%  Similarity=0.215  Sum_probs=185.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. ++|.++++++|||+++...  +++++|++|||+|++|++|++++|+|+..|++|+++++++++++++
T Consensus       192 ~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          192 LMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             EEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             eeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            5788 9999999 8888999999999999654  7899999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCceeeccCh----------------hhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecc
Q 027106           80 KDKLGFDDAFNYKEE----------------TDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~----------------~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      + ++|++.++++.+.                +.+.+.+++.+++ ++|+||||+|++.+..++++++++|+++.+|...+
T Consensus       270 ~-~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          270 R-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             H-HHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC
T ss_pred             H-hhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC
Confidence            9 9999999987653                1234778888877 99999999999999999999999999999997653


Q ss_pred             cCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEE
Q 027106          143 YTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKV  222 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvv  222 (228)
                      .     ....+...+..+++++.|+.....     +.+.++++++++|++++.++.+++|+++++||+.+.+++..||+|
T Consensus       349 ~-----~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvv  418 (456)
T 3krt_A          349 Y-----MHEYDNRYLWMSLKRIIGSHFANY-----REAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVG  418 (456)
T ss_dssp             S-----EEEEEHHHHHHTTCEEEECCSCCH-----HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEE
T ss_pred             c-----ccccCHHHHHhcCeEEEEeccCCH-----HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEE
Confidence            2     224566778888999999887763     455678999999999999888999999999999999999999999


Q ss_pred             EEec
Q 027106          223 VRIT  226 (228)
Q Consensus       223 l~~~  226 (228)
                      |.+.
T Consensus       419 v~~~  422 (456)
T 3krt_A          419 VLCL  422 (456)
T ss_dssp             EESS
T ss_pred             EEeC
Confidence            9874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=6.6e-34  Score=228.35  Aligned_cols=215  Identities=13%  Similarity=0.170  Sum_probs=181.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus       110 ~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  186 (340)
T 3gms_A          110 VVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-  186 (340)
T ss_dssp             EEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-
T ss_pred             eEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999999 888999999999999988899999999999999889999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH-h
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI-Y  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~  159 (228)
                      ++|++.++|+.+. ++.+.+.+.+++ ++|++|||+|++....++++++++|+++.+|...+.       ..++..+. .
T Consensus       187 ~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~  258 (340)
T 3gms_A          187 RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTK  258 (340)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHT
T ss_pred             hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhc
Confidence            8999999998876 889999999887 999999999998777888999999999999976532       22333333 2


Q ss_pred             hhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCcc-ccceecccCcHHHHHHHhHcCCC-cceEEEEecC
Q 027106          160 KRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYP-LEDISDGVESIPSAFTGLFQGGN-IGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~A~~~~~~~~~-~gkvvl~~~~  227 (228)
                      .++.+..+....+     ....++.++++++++.+|++++ .+..++|++++++||+.+.+++. .||++|++.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          259 AKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             SCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             ccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            3445444443322     2334678999999999999998 46778899999999999999984 5999999865

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-33  Score=227.70  Aligned_cols=213  Identities=24%  Similarity=0.366  Sum_probs=185.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ 
T Consensus       136 ~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  212 (351)
T 1yb5_A          136 VYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-  212 (351)
T ss_dssp             EEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-
T ss_pred             eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-
Confidence            5788 9999999 889999999999999977899999999999999999999999999999999999999999999888 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|++.+..++++++++|+++.+|....       ...+...++.+
T Consensus       213 ~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~  284 (351)
T 1yb5_A          213 QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAK  284 (351)
T ss_dssp             HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTT
T ss_pred             HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEecCCC-------CccCHHHHHhC
Confidence            9999988888876 888888887766 89999999999889999999999999999985321       23455667889


Q ss_pred             hceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHH-hHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTG-LFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~-~~~~~~~gkvvl~~  225 (228)
                      ++++.++..... +....+.++.+.+++.+|++++.+..+||++++++||+. +.++...||+||++
T Consensus       285 ~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          285 ESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             TCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999865433 444567778888899999999998889999999999998 55566789999974

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=5.5e-34  Score=229.91  Aligned_cols=216  Identities=25%  Similarity=0.372  Sum_probs=186.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ 
T Consensus       128 ~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  204 (354)
T 2j8z_A          128 LMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-  204 (354)
T ss_dssp             EEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-
T ss_pred             cEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999999 888999999999999987899999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-HHHHh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-LDVIY  159 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~  159 (228)
                      ++|++.++|+.+. ++.+.+.+.+.+ ++|++|||+|++.+..++++++++|+++.+|...+.     ....+. ..++.
T Consensus       205 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~  278 (354)
T 2j8z_A          205 KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLF  278 (354)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHH
T ss_pred             HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHh
Confidence            9999988888876 888888888876 899999999999999999999999999999975432     124555 67788


Q ss_pred             hhceeeceecccch-----hHHHHHHHHHHHHHHcC---CCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          160 KRIKFQGFLAADHL-----NLYQDFISTTCNHLRSG---AIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       160 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g---~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      +++++.++......     ....+.++++++++++|   ++++.+..+++++++++||+.+.+++..||+||+++
T Consensus       279 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          279 KRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             TTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             CCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99999998765431     11223456788999999   999888889999999999999998888899999885

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=4.8e-34  Score=229.30  Aligned_cols=210  Identities=19%  Similarity=0.379  Sum_probs=182.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++ .+++++++++ 
T Consensus       116 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-  191 (343)
T 3gaz_A          116 LASK-PAALTMR-QASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-  191 (343)
T ss_dssp             EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-
T ss_pred             eeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-
Confidence            5788 9999999 8899999999999999888999999999999999999999999999999999999 7899999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++. ++ .+. ++.+.+.+.+++ ++|++|||+|++.+..++++++++|+++.+|...         ..+...+..+
T Consensus       192 ~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~  259 (343)
T 3gaz_A          192 DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFK  259 (343)
T ss_dssp             HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHT
T ss_pred             HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhc
Confidence            999987 77 544 788888888877 9999999999999999999999999999998653         2345677789


Q ss_pred             hceeeceecccc------hhHHHHHHHHHHHHHHcCCCccccc-eecccCcHHHHHHHhHcCCC----cceEEEEecC
Q 027106          161 RIKFQGFLAADH------LNLYQDFISTTCNHLRSGAIYPLED-ISDGVESIPSAFTGLFQGGN----IGKKVVRITE  227 (228)
Q Consensus       161 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~A~~~~~~~~~----~gkvvl~~~~  227 (228)
                      ++++.++.....      +....+.++++++++++|++++.+. .+++++++++||+.+.+++.    .||+|++++.
T Consensus       260 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          260 QATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             TCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             CcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            999988765321      2344588999999999999999888 68999999999999998864    5899999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=4.2e-34  Score=229.73  Aligned_cols=210  Identities=26%  Similarity=0.362  Sum_probs=185.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ 
T Consensus       132 ~~~~-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-  208 (343)
T 2eih_A          132 LAPK-PKNLSFE-EAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-  208 (343)
T ss_dssp             EEEC-CTTSCHH-HHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-
T ss_pred             eEEC-CCCCCHH-HHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999998 788899999999999966679999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++|+.+. ++.+.+.+.+++ ++|++||++|++.++.++++++++|+++.+|...+.     ....+...++.+
T Consensus       209 ~~ga~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~  282 (343)
T 2eih_A          209 ALGADETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYR  282 (343)
T ss_dssp             HHTCSEEEETTST-THHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHT
T ss_pred             hcCCCEEEcCCcc-cHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhC
Confidence            8999888888776 788888888876 899999999988999999999999999999976532     123455677889


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.|+....     .+.++++++++.+|++++.++.+++|+++++||+.+.+++..||+|+++
T Consensus       283 ~~~~~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          283 QLSILGSTMAS-----KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             TCEEEECCSCC-----GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CcEEEEecCcc-----HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999876544     4678999999999999998888999999999999999888889999986

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.3e-33  Score=227.40  Aligned_cols=208  Identities=21%  Similarity=0.314  Sum_probs=185.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|+++++++|||+++ +..++++|++|||+|+ |++|.+++|+++.. |++|++++++++++++++
T Consensus       130 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~  205 (348)
T 4eez_A          130 AVKV-PDGLDPI-EASSITCAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK  205 (348)
T ss_dssp             SCBC-CTTSCHH-HHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH
T ss_pred             eeec-CCCCCHH-HHhhcccceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh
Confidence            5789 9999999 8999999999999999 6789999999999996 99999999999876 569999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|++.++|+++. ++.+.+++.+++ ++|++++++++ ..+..++++++++|+++.+|....      ....+...++
T Consensus       206 -~~Ga~~~i~~~~~-~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~  277 (348)
T 4eez_A          206 -KIGADVTINSGDV-NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVV  277 (348)
T ss_dssp             -HTTCSEEEEC-CC-CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHH
T ss_pred             -hcCCeEEEeCCCC-CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHH
Confidence             9999999999987 899999999988 99999999886 689999999999999999986543      2356677888


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      .+++++.|+...+     ++.++++++++++|+++|.+ .++||+++++||+.+.+++..||+||+|+.
T Consensus       278 ~~~~~i~gs~~~~-----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          278 FDGVEVAGSLVGT-----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             HSCCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             hCCeEEEEEecCC-----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            9999999988877     57789999999999999865 578999999999999999999999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-33  Score=225.07  Aligned_cols=215  Identities=21%  Similarity=0.211  Sum_probs=184.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ 
T Consensus       106 ~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-  182 (327)
T 1qor_A          106 AAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-  182 (327)
T ss_dssp             EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-
T ss_pred             cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999998 888999999999999977899999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++++.+. ++.+.+.+.+.+ ++|++|||+|.+.++.++++++++|+++.+|...+.     ...++...++.+
T Consensus       183 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~  256 (327)
T 1qor_A          183 KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQK  256 (327)
T ss_dssp             HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHT
T ss_pred             HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEecCCCC-----CCccCHHHHhhc
Confidence            8999888888776 788888887766 899999999988999999999999999999975431     123555666677


Q ss_pred             -hceeeceecccc---hhHHHHHHHHHHHHHHcCCCccccc--eecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 -RIKFQGFLAADH---LNLYQDFISTTCNHLRSGAIYPLED--ISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                       ++.+.+.....+   +...++.++++++++.+|++++.+.  .+++++++++||+.+.+++..||++|++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          257 GSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             TSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence             777776544222   2234677999999999999999888  8899999999999999988889999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=9e-34  Score=229.26  Aligned_cols=212  Identities=15%  Similarity=0.170  Sum_probs=182.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCC-----CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPK-----KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~   75 (228)
                      ++++ |+++++. ++|+++++++|||+++.+..+++     +|++|||+||+|++|++++|+|+.+ |++|+++++++++
T Consensus       132 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~  209 (363)
T 4dvj_A          132 VGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPET  209 (363)
T ss_dssp             CEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHH
T ss_pred             eeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence            6788 9999999 89999999999999998888998     9999999999999999999999984 8899999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                      .++++ ++|+++++++++  ++.+.+++..++++|+||||+|++ .++.++++++++|+++.+|...         ..+.
T Consensus       210 ~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~  277 (363)
T 4dvj_A          210 QEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDI  277 (363)
T ss_dssp             HHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCG
T ss_pred             HHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCC---------ccch
Confidence            99999 999999998874  677888877545999999999985 8899999999999999996432         3445


Q ss_pred             HHHHhhhceeeceecccc-------hhHHHHHHHHHHHHHHcCCCccccceec---ccCcHHHHHHHhHcCCCcceEEEE
Q 027106          155 LDVIYKRIKFQGFLAADH-------LNLYQDFISTTCNHLRSGAIYPLEDISD---GVESIPSAFTGLFQGGNIGKKVVR  224 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~A~~~~~~~~~~gkvvl~  224 (228)
                      ..+..+++++.++.....       .....+.++++++++++|++++.+..++   +++++++||+.+.+++..||+||+
T Consensus       278 ~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~  357 (363)
T 4dvj_A          278 MLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIE  357 (363)
T ss_dssp             GGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred             HHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEe
Confidence            566678888887654331       1223578999999999999999887765   999999999999999999999999


Q ss_pred             ecC
Q 027106          225 ITE  227 (228)
Q Consensus       225 ~~~  227 (228)
                      +..
T Consensus       358 ~~~  360 (363)
T 4dvj_A          358 GFG  360 (363)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            853

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=6.3e-33  Score=224.07  Aligned_cols=221  Identities=34%  Similarity=0.630  Sum_probs=187.9

Q ss_pred             cccCCCCCC---CcchhhhccchhHHHHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 027106            2 LRKFDPMGF---PLSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK   75 (228)
Q Consensus         2 ~~~v~P~~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~   75 (228)
                      ++++ |+++   +.++++|+++++++|||+++.+.+++++|  ++|||+|++|++|++++|+++..|+ +|+++++++++
T Consensus       120 ~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~  198 (357)
T 2zb4_A          120 LEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEK  198 (357)
T ss_dssp             CEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             ceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHH
Confidence            5788 9888   22334889999999999999888999999  9999999999999999999999999 99999999999


Q ss_pred             HHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccc--
Q 027106           76 VTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPE--  153 (228)
Q Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--  153 (228)
                      .+.+++++|++.++|+.+. ++.+.+.+.+.+++|++|||+|+..++.++++++++|+++.+|...+...   ..+..  
T Consensus       199 ~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~---~~~~~~~  274 (357)
T 2zb4_A          199 CILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNK---DVPYPPP  274 (357)
T ss_dssp             HHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTS---CCCSSCC
T ss_pred             HHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCcccccc---Ccccccc
Confidence            9998833999888888876 88888888876689999999999999999999999999999997653210   11111  


Q ss_pred             -----hHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          154 -----MLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       154 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                           ...++.+++++.++....+.....+.++++++++.+|++++.+..+++++++++||+.+.+++..||+||++++
T Consensus       275 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          275 LSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             CCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             chhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEec
Confidence                 24677899999998775544445688999999999999999888889999999999999998888999999865

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=6.8e-35  Score=232.67  Aligned_cols=212  Identities=20%  Similarity=0.270  Sum_probs=181.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGE-KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~-~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. ++|++++.++|||++++..  .++++++ +|||+|++|++|++++|+|+..|++|+++++++++.++
T Consensus       109 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~  186 (324)
T 3nx4_A          109 LVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY  186 (324)
T ss_dssp             CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            5788 9999999 8999999999999998643  5566643 49999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|+++++|+++. +.   +++.+++++|++|||+|++.++.++++++++|+++.+|...+.     ..+.+...++
T Consensus       187 ~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~  256 (324)
T 3nx4_A          187 LK-SLGANRILSRDEF-AE---SRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFI  256 (324)
T ss_dssp             HH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHH
T ss_pred             HH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHh
Confidence            99 9999999988764 32   4555556899999999999999999999999999999976532     1245567788


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      .+++++.+++.... +....+.++.+.+++++|++++. ..+++++++++||+.+.+++..||+||+++
T Consensus       257 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          257 LRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             hcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            89999999876543 44456789999999999999987 788899999999999999999999999875

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-33  Score=226.77  Aligned_cols=203  Identities=20%  Similarity=0.273  Sum_probs=179.3

Q ss_pred             cccCCCCCCCcchhhh---ccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHH
Q 027106            2 LRKFDPMGFPLSYQVG---ILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKV   76 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa---~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~   76 (228)
                      ++++ |+++++. ++|   ++++++.|||+++... +++++|++|||+|+ |++|++++|+|+.+ |++|++++++++++
T Consensus       148 ~~~i-P~~~~~~-~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~  224 (359)
T 1h2b_A          148 VIKL-PKDISRE-KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL  224 (359)
T ss_dssp             EEEC-CTTCCHH-HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH
T ss_pred             EEEC-CCCCCHH-HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            5788 9999998 777   7899999999999665 89999999999998 99999999999999 99999999999999


Q ss_pred             HHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh---HHHHHHHccccCcEEEEEeeecccCCCcCCCcc
Q 027106           77 TLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE---MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAP  152 (228)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  152 (228)
                      ++++ ++|+++++|+++.  +.+.+++.+++ ++|++||++|++   .+..++++  ++|+++.+|...+      . ..
T Consensus       225 ~~~~-~lGa~~vi~~~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~------~-~~  292 (359)
T 1h2b_A          225 KLAE-RLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE------L-RF  292 (359)
T ss_dssp             HHHH-HTTCSEEEETTSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC------C-CC
T ss_pred             HHHH-HhCCCEEEeccch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC------C-CC
Confidence            9999 9999999998763  67778888877 899999999986   78888888  9999999987542      1 45


Q ss_pred             chHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          153 EMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +...++.+++++.++....     ++.++++++++.+|++++.+ .+++++++++||+.+.+++..||+||++
T Consensus       293 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          293 PTIRVISSEVSFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CHHHHHhCCcEEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            5667788999999987765     57889999999999999988 8889999999999999988889999974

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.3e-33  Score=228.19  Aligned_cols=213  Identities=19%  Similarity=0.265  Sum_probs=182.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       159 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~  235 (378)
T 3uko_A          159 VAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK  235 (378)
T ss_dssp             EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5788 9999999 899999999999999988899999999999997 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeecc--ChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHH
Q 027106           81 DKLGFDDAFNYK--EETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  156 (228)
                       ++|+++++++.  +. ++.+.+++.+++++|+||||+|+ ..++.++++++++ |+++.+|.....    .....+...
T Consensus       236 -~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~----~~~~~~~~~  309 (378)
T 3uko_A          236 -KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG----QEISTRPFQ  309 (378)
T ss_dssp             -TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHH
T ss_pred             -HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC----CccccCHHH
Confidence             99999999887  44 88999999988899999999998 5899999999996 999999975421    122334444


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++. ++++.|+....+.  .++.++++++++.+|++++  .++.++||+++++||+.+.+++.. |+||++++
T Consensus       310 ~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          310 LVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             HHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             Hhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            544 8888888765431  1567899999999999885  467788999999999999888765 99999864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=9.7e-34  Score=235.10  Aligned_cols=211  Identities=23%  Similarity=0.221  Sum_probs=184.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI--GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. ++|.++++++|||+++...  +++++|++|||+|++|++|++++|+|+..|++|+++++++++++.+
T Consensus       184 ~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          184 LLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             cEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5789 9999999 8888999999999999643  8999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCceeeccChhh------------------HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           80 KDKLGFDDAFNYKEETD------------------LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      + ++|++.++++.+. +                  +.+.+++.+++++|++||++|.+.++.++++++++|+++.+|...
T Consensus       262 ~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~  339 (447)
T 4a0s_A          262 R-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS  339 (447)
T ss_dssp             H-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTT
T ss_pred             H-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCC
Confidence            8 9999988886543 2                  366777777448999999999999999999999999999999755


Q ss_pred             ccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceE
Q 027106          142 EYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKK  221 (228)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv  221 (228)
                      +.     ....+...++.+++++.|+....     .+.+.++++++++|++++.++.+++++++++||+.+.+++..||+
T Consensus       340 ~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKv  409 (447)
T 4a0s_A          340 GY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKV  409 (447)
T ss_dssp             CS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEE
T ss_pred             Cc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEE
Confidence            32     22456677888999999988776     356678999999999999888899999999999999999999999


Q ss_pred             EEEec
Q 027106          222 VVRIT  226 (228)
Q Consensus       222 vl~~~  226 (228)
                      +|.+.
T Consensus       410 vv~~~  414 (447)
T 4a0s_A          410 AVLCM  414 (447)
T ss_dssp             EEESS
T ss_pred             EEEeC
Confidence            99874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-33  Score=224.15  Aligned_cols=212  Identities=20%  Similarity=0.242  Sum_probs=183.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       156 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~  232 (371)
T 1f8f_A          156 TVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK  232 (371)
T ss_dssp             EEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred             eEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            5788 9999998 888999999999999988899999999999995 9999999999999999 7999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++++++. ++.+.+++.+++++|+|||++|. ..++.++++++++|+++.+|.....    ....++...++.
T Consensus       233 -~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~  306 (371)
T 1f8f_A          233 -QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLL  306 (371)
T ss_dssp             -HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHH
T ss_pred             -HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----CccccCHHHHHh
Confidence             9999999998876 88888888887799999999997 6889999999999999999976421    123456677888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      +++++.+++...+.  .++.++++++++++|++++.  ++. +|++++++||+.+.+++. +|+||++.
T Consensus       307 ~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          307 GGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             TTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            99999998765421  24779999999999999864  555 899999999999988775 79999873

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.3e-33  Score=227.01  Aligned_cols=205  Identities=19%  Similarity=0.199  Sum_probs=179.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE-IGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+ +++. ++|+++++++|||+++.+ ..++++|++|||+|+ |++|++++|+|+.. +++|+++++++++++++
T Consensus       137 ~~~~-p~-~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          137 LVPI-GD-LDPV-AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             EEEC-TT-CCHH-HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             eEeC-CC-CCHH-HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            5678 88 8888 888999999999999976 458999999999997 99999999999999 67999999999999999


Q ss_pred             HHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           80 KDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      + ++|+++++++++  ++.+.+++.+++ ++|++||++|++ .++.++++++++|+++.+|...+..     ...+. .+
T Consensus       213 ~-~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~-~~  283 (345)
T 3jv7_A          213 R-EVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-----AKVGF-FM  283 (345)
T ss_dssp             H-HTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCC-----EEEST-TT
T ss_pred             H-HcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-----CCcCH-HH
Confidence            9 999999998865  778888888887 999999999986 9999999999999999999765421     12333 56


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.+++++.++....     .+.++++++++++|++++. ..+++++++++||+.+.+++..||+||++
T Consensus       284 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          284 IPFGASVVTPYWGT-----RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             SCTTCEEECCCSCC-----HHHHHHHHHHHHTTCCCCC-EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HhCCCEEEEEecCC-----HHHHHHHHHHHHcCCCceE-EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            67899999988776     5789999999999999984 47789999999999999999999999974

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.9e-34  Score=231.23  Aligned_cols=212  Identities=17%  Similarity=0.166  Sum_probs=180.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG-EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++.++|||+++ +.++ ++| ++|||+||+|++|++++|+|+..|++|+++++++++++.++
T Consensus       131 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  206 (349)
T 3pi7_A          131 CIPL-LDTVRDE-DGAAMIVNPLTAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK  206 (349)
T ss_dssp             EEEC-CTTCCC---GGGSSHHHHHHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH
T ss_pred             eEEC-CCCCCHH-HHhhccccHHHHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5788 9999999 8999999999999766 5566 677 79999999999999999999999999999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-HHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-LDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~  158 (228)
                       ++|++.++|+++. ++.+.+++.+++ ++|++|||+|++.+..++++++++|+++.+|...+.     ....+. ..++
T Consensus       207 -~~Ga~~~~~~~~~-~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~  279 (349)
T 3pi7_A          207 -DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD-----ATVIREPGQLI  279 (349)
T ss_dssp             -HHTCSEEEETTST-THHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS-----CCCCSCTHHHH
T ss_pred             -HcCCCEEEECCcH-HHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC-----CCCCCchhhhh
Confidence             9999999999886 899999988876 999999999998889999999999999999975532     224555 7788


Q ss_pred             hhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.+++...+    +....+.++++++++++|++++.++.+++++++++||+. .++...||+||++
T Consensus       280 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          280 FQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             HSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             ccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            89999999887654    233467899999999999999999999999999999994 4555668999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.8e-32  Score=219.45  Aligned_cols=221  Identities=43%  Similarity=0.756  Sum_probs=184.3

Q ss_pred             cccCCCCC----CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106            2 LRKFDPMG----FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~----~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~   77 (228)
                      ++++ |++    +++...+|+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+
T Consensus       106 ~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~  184 (333)
T 1v3u_A          106 LEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA  184 (333)
T ss_dssp             EEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             eEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            5788 886    77772368999999999999988899999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-CCCccchH
Q 027106           78 LLKDKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-KRAAPEML  155 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~  155 (228)
                      .++ ++|++.++|..+ . ++.+.+.+.+++++|++||++|++.+..++++++++|+++.+|...+.+... .....+..
T Consensus       185 ~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  262 (333)
T 1v3u_A          185 YLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPE  262 (333)
T ss_dssp             HHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHH
T ss_pred             HHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHH
Confidence            997 999988888876 5 7888888877668999999999988999999999999999999754311000 01112556


Q ss_pred             HHHhhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          156 DVIYKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .++.+++++.|+....+ +...++.++++++++.+|++++.+..+++++++++||+.+.+++..||+||++
T Consensus       263 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          263 SIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            78889999999876554 24456789999999999999998888889999999999999988889999974

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.6e-33  Score=222.39  Aligned_cols=207  Identities=23%  Similarity=0.320  Sum_probs=182.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.. .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ 
T Consensus       131 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  205 (339)
T 1rjw_A          131 VVKI-PDNLSFE-EAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-  205 (339)
T ss_dssp             CEEC-CTTSCHH-HHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-
T ss_pred             EEEC-CCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            6788 9999999 889999999999999955 58999999999998 89999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++|+.+. ++.+.+++.+ +++|++||++|. ..++.++++++++|+++.+|...+      ....+...++.+
T Consensus       206 ~lGa~~~~d~~~~-~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~  277 (339)
T 1rjw_A          206 ELGADLVVNPLKE-DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLN  277 (339)
T ss_dssp             HTTCSEEECTTTS-CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHT
T ss_pred             HCCCCEEecCCCc-cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC------CCccCHHHHHhC
Confidence            8999988888765 7777787766 689999999997 789999999999999999987542      124566777889


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++++.++....     .+.++++++++.+|++++.+ .++|++++++||+.+.+++..||+||++++
T Consensus       278 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          278 GIKIIGSIVGT-----RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             TCEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             CcEEEEeccCC-----HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999987665     47789999999999999864 578999999999999998888999999875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.2e-33  Score=223.66  Aligned_cols=202  Identities=25%  Similarity=0.266  Sum_probs=173.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++ +.+++++|++|||+||+|++|++++|+|+..|++|++++ ++++.++++ 
T Consensus       119 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-  193 (321)
T 3tqh_A          119 IIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-  193 (321)
T ss_dssp             EEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-
T ss_pred             hccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-
Confidence            5788 9999999 8999999999999999 889999999999999899999999999999999999998 566788898 


Q ss_pred             HhCCCceeeccChhh-HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKEETD-LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|+++++|+++. + +.+.+     +++|++|||+|++....++++++++|+++.+|....        .........+
T Consensus       194 ~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~--------~~~~~~~~~~  259 (321)
T 3tqh_A          194 ALGAEQCINYHEE-DFLLAIS-----TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITA--------GRVIEVAKQK  259 (321)
T ss_dssp             HHTCSEEEETTTS-CHHHHCC-----SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTH--------HHHHHHHHHT
T ss_pred             HcCCCEEEeCCCc-chhhhhc-----cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCc--------hhhhhhhhhc
Confidence            9999999998875 5 44333     479999999999877999999999999999975432        1123345678


Q ss_pred             hceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ++++.++.....    .+.++++++++.+|++++.+..+++++++++||+.+.+++..||+||+++
T Consensus       260 ~~~~~~~~~~~~----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          260 HRRAFGLLKQFN----IEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             TCEEECCCCCCC----HHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ceEEEEEecCCC----HHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            888888543321    57799999999999999998889999999999999999999999999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.7e-33  Score=228.04  Aligned_cols=209  Identities=17%  Similarity=0.254  Sum_probs=175.1

Q ss_pred             CCCcchhhhccchhHHHHHHHHHHhcCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHh
Q 027106            9 GFPLSYQVGILGFSGLTAYAGLFEIGKPKKG-EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK----VTLLKDKL   83 (228)
Q Consensus         9 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~----~~~~~~~~   83 (228)
                      ++++. ++|+++++++|||+++.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .+.++ ++
T Consensus       138 ~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~l  215 (364)
T 1gu7_A          138 GLTIN-QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-EL  215 (364)
T ss_dssp             CCCHH-HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HH
T ss_pred             CCCHH-HHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hc
Confidence            79998 8899999999999999776899999 999999999999999999999999999988865543    57777 99


Q ss_pred             CCCceeeccC---hhhHHHHHHHHC--CC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           84 GFDDAFNYKE---ETDLKAALKRYF--PD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        84 g~~~~~~~~~---~~~~~~~~~~~~--~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      |+++++++++   . ++.+.+++.+  ++ ++|+||||+|++....++++++++|+++.+|...+.     ....+...+
T Consensus       216 Ga~~vi~~~~~~~~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~  289 (364)
T 1gu7_A          216 GATQVITEDQNNSR-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLY  289 (364)
T ss_dssp             TCSEEEEHHHHHCG-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHH
T ss_pred             CCeEEEecCccchH-HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHH
Confidence            9999998874   4 7778888877  44 899999999997666889999999999999975432     124556677


Q ss_pred             Hhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccC---cHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVE---SIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.+++++.++....+    +...++.++++++++++|++++.+..+++++   ++.+||+.+.+++..||+||++
T Consensus       290 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          290 IFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            789999999876543    2233578999999999999998877777664   9999999999988889999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2e-33  Score=226.93  Aligned_cols=214  Identities=21%  Similarity=0.347  Sum_probs=176.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~   77 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|+++++++++.    ++.+
T Consensus       133 ~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~  210 (357)
T 1zsy_A          133 LIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSD  210 (357)
T ss_dssp             EEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHH
T ss_pred             cEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHH
Confidence            5788 9999998 88899999999999998888999999999999999999999999999999888777542    3567


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCC--CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPD--GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                      +++ ++|+++++++.+.  ..+.+.+.+.+  ++|+||||+|++....++++++++|+++.+|...+.     ....+..
T Consensus       211 ~~~-~lGa~~vi~~~~~--~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~  282 (357)
T 1zsy_A          211 RLK-SLGAEHVITEEEL--RRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQ-----PVVASVS  282 (357)
T ss_dssp             HHH-HTTCSEEEEHHHH--HSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCTTC-----CBCCCHH
T ss_pred             HHH-hcCCcEEEecCcc--hHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEecCCCC-----CCCCCHH
Confidence            888 9999998886531  22345555544  599999999998777899999999999999865422     2245566


Q ss_pred             HHHhhhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          156 DVIYKRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .++.+++++.+++...+     +...++.++++++++.+|++++.+..++|++++++||+.+.+++..||+||++
T Consensus       283 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          283 LLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            77789999999876543     22345678999999999999998878899999999999999888788999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.2e-33  Score=226.03  Aligned_cols=220  Identities=22%  Similarity=0.329  Sum_probs=176.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+..| ++|++++ ++++.+.++
T Consensus       108 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~  184 (349)
T 4a27_A          108 VYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK  184 (349)
T ss_dssp             EEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG
T ss_pred             eEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH
Confidence            5788 9999999 8899999999999999888999999999999999999999999999986 5899888 667767665


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCc-----------CC
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGK-----------KR  149 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~  149 (228)
                        +|++++++ .+. ++.+.+++.+++++|++|||+|++.++.++++++++|+++.+|......-..           ..
T Consensus       185 --~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~  260 (349)
T 4a27_A          185 --DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQV  260 (349)
T ss_dssp             --GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-------CTTEEEEEEEEEEC----------------------
T ss_pred             --cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccc
Confidence              89999888 555 8888999888779999999999987899999999999999999753211000           01


Q ss_pred             CccchHHHHhhhceeeceecccc------hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEE
Q 027106          150 AAPEMLDVIYKRIKFQGFLAADH------LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVV  223 (228)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl  223 (228)
                      ...+...++.++.++.++....+      ....++.++++++++++|++++.++.+++++++++||+.+.+++..||+||
T Consensus       261 ~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi  340 (349)
T 4a27_A          261 EKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL  340 (349)
T ss_dssp             ---CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEE
T ss_pred             cccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEE
Confidence            23456777889999999887543      133478899999999999999999999999999999999999999999999


Q ss_pred             EecCC
Q 027106          224 RITEE  228 (228)
Q Consensus       224 ~~~~~  228 (228)
                      +++++
T Consensus       341 ~~~~~  345 (349)
T 4a27_A          341 DVEKT  345 (349)
T ss_dssp             ETTCC
T ss_pred             ecCCC
Confidence            98753

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.3e-33  Score=225.43  Aligned_cols=221  Identities=17%  Similarity=0.187  Sum_probs=181.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHh-cCC-----------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEI-GKP-----------KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS   69 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~-~~~-----------~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~   69 (228)
                      ++++ |+++++. ++|.++++++|||+++.+. .++           ++|++|||+|++|++|++++|+|+..|++|+++
T Consensus       118 ~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~  195 (371)
T 3gqv_A          118 WAKI-PKGLSFE-QAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIAT  195 (371)
T ss_dssp             EEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            5788 9999999 8888999999999999777 553           899999999998999999999999999999998


Q ss_pred             eCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHcc-ccCcEEEEEeeecccCCCc
Q 027106           70 AGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANM-NTYGRVAVCGVISEYTDGK  147 (228)
Q Consensus        70 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~  147 (228)
                      + +++++++++ ++|+++++|+++. ++.+.+++.+++++|++|||+|+ ..+..+++++ +++|+++.+|...+.....
T Consensus       196 ~-~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~  272 (371)
T 3gqv_A          196 C-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATR  272 (371)
T ss_dssp             E-CGGGHHHHH-HTTCSEEEETTST-THHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CC
T ss_pred             e-CHHHHHHHH-HcCCcEEEECCCc-hHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccc
Confidence            7 788999999 9999999999887 89999999998889999999998 6899999999 5899999999654311000


Q ss_pred             CCCc---cchHHHHhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCcccccee--cccCcHHHHHHHhHcCCCc
Q 027106          148 KRAA---PEMLDVIYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDIS--DGVESIPSAFTGLFQGGNI  218 (228)
Q Consensus       148 ~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~--~~~~~~~~A~~~~~~~~~~  218 (228)
                      ....   .....++.+++++.|++....    .....++++++++++.+|++++.+..+  ++++++++||+.+.+++..
T Consensus       273 ~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~  352 (371)
T 3gqv_A          273 KMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELS  352 (371)
T ss_dssp             SCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCS
T ss_pred             cccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCc
Confidence            0111   112356678899888765432    223456678999999999999987665  6999999999999999877


Q ss_pred             c-eEEEEecC
Q 027106          219 G-KKVVRITE  227 (228)
Q Consensus       219 g-kvvl~~~~  227 (228)
                      | |+|+++++
T Consensus       353 Gkkvvv~~~~  362 (371)
T 3gqv_A          353 GEKLVVRLEG  362 (371)
T ss_dssp             SCEEEEEECC
T ss_pred             eEEEEEEeCC
Confidence            7 67777754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3e-33  Score=225.47  Aligned_cols=211  Identities=18%  Similarity=0.178  Sum_probs=178.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       133 ~~~i-P~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  208 (352)
T 3fpc_A          133 LAHL-PKEIPLE-AAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL  208 (352)
T ss_dssp             CEEC-CTTSCHH-HHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH
T ss_pred             EEEC-CCCCCHH-HHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence            5788 9999999 8888889999999999 7899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch--HH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM--LD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~  156 (228)
                       ++|+++++++++. ++.+.+++.+++ ++|+|||++|+ ..++.++++++++|+++.+|...+..    ....+.  ..
T Consensus       209 -~lGa~~vi~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~  282 (352)
T 3fpc_A          209 -EYGATDIINYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGD----NIDIPRSEWG  282 (352)
T ss_dssp             -HHTCCEEECGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCS----EEEEETTTTG
T ss_pred             -HhCCceEEcCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCC----ceecchhHhh
Confidence             9999999999876 899999999988 99999999998 68999999999999999999754321    111111  12


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccc--cceecc-cCcHHHHHHHhHcCCC-cceEEEEec
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL--EDISDG-VESIPSAFTGLFQGGN-IGKKVVRIT  226 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~-~~~~~~A~~~~~~~~~-~gkvvl~~~  226 (228)
                      ...++.++.++.....    ++.++++++++.+|++++.  ++.+++ |+++++||+.+.+++. .+|+||+++
T Consensus       283 ~~~~~~~i~g~~~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          283 VGMGHKHIHGGLCPGG----RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             GGTBCEEEEEBCCCCH----HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             hhccccEEEEeeccCc----hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            2346777777665321    4678999999999999985  566788 9999999999998764 489999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.2e-33  Score=221.79  Aligned_cols=207  Identities=26%  Similarity=0.344  Sum_probs=174.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.+ +++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus        92 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-  167 (302)
T 1iz0_A           92 LLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-  167 (302)
T ss_dssp             CEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-
T ss_pred             cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-
Confidence            5788 9999998 88999999999999997777 999999999999999999999999999999999999999999998 


Q ss_pred             HhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh
Q 027106           82 KLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK  160 (228)
Q Consensus        82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  160 (228)
                      ++|++.++++++ . ++.+.+     +++|++|| +|++.++.++++++++|+++.+|...+.     ....+...++.+
T Consensus       168 ~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~  235 (302)
T 1iz0_A          168 ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRR  235 (302)
T ss_dssp             HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHT
T ss_pred             hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhC
Confidence            899998888775 4 555444     57999999 9989999999999999999999976532     113455667889


Q ss_pred             hceeeceecccchhHHHHHHHHHHH---HHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          161 RIKFQGFLAADHLNLYQDFISTTCN---HLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      ++++.++....+ ...++.++++++   ++.+|++++.++.+++++++++||+.+.+++..||+++++
T Consensus       236 ~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          236 NLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             CCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999999876532 122577888899   9999999998888999999999999999888889999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.8e-32  Score=220.54  Aligned_cols=220  Identities=34%  Similarity=0.483  Sum_probs=184.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+. + . ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ 
T Consensus       131 ~~~~-P~~-~-~-~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-  205 (362)
T 2c0c_A          131 ATPV-PSV-K-P-EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-  205 (362)
T ss_dssp             CEEC-SSS-C-H-HHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-
T ss_pred             eEEC-CCC-c-h-HhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-
Confidence            5788 875 3 3 588999999999999988899999999999999999999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcC--CC--ccchHHH
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKK--RA--APEMLDV  157 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~--~~~~~~~  157 (228)
                      ++|++.++++++. ++.+.+++.+++++|++|||+|+..++.++++++++|+++.+|...+......  ..  ......+
T Consensus       206 ~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  284 (362)
T 2c0c_A          206 SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKL  284 (362)
T ss_dssp             HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHH
T ss_pred             HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHH
Confidence            8999998988776 78888888775589999999999999999999999999999997653210000  00  0113567


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccc--------eecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLED--------ISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--------~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+++++.|++...+....++.++++++++++|++++.+.        ..++++++++||+.+.+++..||+||++++
T Consensus       285 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          285 LKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            7899999998876544444678999999999999998754        456999999999999988888999999854

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3.9e-33  Score=226.06  Aligned_cols=209  Identities=17%  Similarity=0.251  Sum_probs=179.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++ +++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       150 ~~~~-P~~~~~~-~a-al~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  224 (370)
T 4ej6_A          150 AFEI-PLTLDPV-HG-AFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE  224 (370)
T ss_dssp             EEEE-CTTSCTT-GG-GGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred             EEEC-CCCCCHH-HH-hhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 9999988 44 5889999999999 7899999999999997 9999999999999999 9999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHH---HCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKR---YFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  156 (228)
                       ++|++.++|+++. ++.+.+++   .+++++|+||||+|. ..+..++++++++|+++.+|...+.    .....+...
T Consensus       225 -~lGa~~vi~~~~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~  298 (370)
T 4ej6_A          225 -EVGATATVDPSAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFD  298 (370)
T ss_dssp             -HHTCSEEECTTSS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHH
T ss_pred             -HcCCCEEECCCCc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHH
Confidence             9999999998876 88888887   676799999999995 6899999999999999999976531    133567788


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCC-CcceEEEEecC
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGG-NIGKKVVRITE  227 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~~~  227 (228)
                      ++.+++++.|+....      ..++++++++++|++++  .++.++||+++++||+.+.+++ ..+|+++++++
T Consensus       299 ~~~~~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          299 ILFRELRVLGSFINP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             HHHTTCEEEECCSCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             HHhCCcEEEEeccCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            999999999988755      34789999999999954  4677889999999999998877 55799988753

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.1e-33  Score=226.20  Aligned_cols=208  Identities=18%  Similarity=0.217  Sum_probs=182.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLL   79 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~   79 (228)
                      ++++ |+++++. +.|++.++++|||+++ +..+ +++|++|||+| +|++|++++|+|+.+| ++|+++++++++++++
T Consensus       161 ~~~i-P~~l~~~-~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          161 VLKV-SEKDDLD-VLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             EEEE-CTTSCHH-HHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             EEEC-CCCCChH-HhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            6788 9998887 5666767999999999 6688 99999999999 7999999999999999 5999999999999999


Q ss_pred             HHHhCCCceeecc---ChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec-ccCCCcCCCccc
Q 027106           80 KDKLGFDDAFNYK---EETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS-EYTDGKKRAAPE  153 (228)
Q Consensus        80 ~~~~g~~~~~~~~---~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~  153 (228)
                      + ++|++++++++   +. ++.+.+++.+++ ++|+|||++|. ..+..++++++++|+++.+|... +.     ....+
T Consensus       237 ~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~  309 (380)
T 1vj0_A          237 E-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD-----PVPFK  309 (380)
T ss_dssp             H-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC-----CEEEC
T ss_pred             H-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----CeeEc
Confidence            9 99999999887   55 888889998887 89999999997 58999999999999999999754 21     12445


Q ss_pred             hHH-HHhhhceeeceecccchhHHHHHHHHHHHHHHc--CCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          154 MLD-VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRS--GAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      ... ++.+++++.|+....     ++.++++++++++  |++++.+..+++|+++++||+.+.+++.. |+||+++
T Consensus       310 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          310 VYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             hHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            556 778999999987765     5789999999999  99988888889999999999999988877 9999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-32  Score=220.03  Aligned_cols=211  Identities=21%  Similarity=0.333  Sum_probs=182.4

Q ss_pred             CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      .++++ |+++++. ++|+++++++|||+++. ..++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++
T Consensus       135 ~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~  211 (347)
T 2hcy_A          135 QAAHI-PQGTDLA-QVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR  211 (347)
T ss_dssp             TSEEE-CTTCCHH-HHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH
T ss_pred             cEEEC-CCCCCHH-HHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH
Confidence            36789 9999998 88999999999999995 458999999999999999999999999999999999999999989988


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++.++|..+.+++.+.+.+.+++++|++||++|. ..++.++++|+++|+++.+|...+.     ....+...++.
T Consensus       212 -~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~  285 (347)
T 2hcy_A          212 -SIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVV  285 (347)
T ss_dssp             -HTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHH
T ss_pred             -HcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhh
Confidence             8999888887632277777877665589999999997 7899999999999999999975421     12456677888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      +++++.|+....     .+.++++++++++|++++.+ .++|++++++||+.+.+++..||+||+++
T Consensus       286 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          286 KSISIVGSYVGN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             TTCEEEECCCCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             CCcEEEEccCCC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            999999987765     47789999999999999864 57899999999999998888899999886

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.7e-32  Score=220.66  Aligned_cols=214  Identities=16%  Similarity=0.161  Sum_probs=177.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++++++ ++|.+ .+++++++++ ...++++|++|||+|+ |++|++++|+|+.+|+ .+++++.+++++++++
T Consensus       128 ~~~i-P~~l~~~-~aa~l-~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~  202 (346)
T 4a2c_A          128 VFAL-PTDMPIE-DGAFI-EPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK  202 (346)
T ss_dssp             EEEC-CTTSCGG-GGGGH-HHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             EEEC-CCCCCHH-HHHhc-hHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH
Confidence            5789 9999998 55544 4555666655 7799999999999996 9999999999999998 5678888999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                       ++|+++++|+++. +..+.++..+++ ++|+++|++|. ..++.++++++++|+++.+|...+.   ......+...++
T Consensus       203 -~lGa~~~i~~~~~-~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~  277 (346)
T 4a2c_A          203 -SFGAMQTFNSSEM-SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKIL  277 (346)
T ss_dssp             -HTTCSEEEETTTS-CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHH
T ss_pred             -HcCCeEEEeCCCC-CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHh
Confidence             9999999999887 888888888877 89999999996 5889999999999999999976532   111234456778


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.|++.........+.++++++++.+|++++  .++++|+|+++++||+.+.+++..||+||++
T Consensus       278 ~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          278 RKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             hceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            899999998765432233467899999999999864  4667889999999999999999999999964

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.9e-32  Score=221.61  Aligned_cols=210  Identities=20%  Similarity=0.231  Sum_probs=178.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       161 ~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  237 (376)
T 1e3i_A          161 LARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK  237 (376)
T ss_dssp             EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             EEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5788 9999998 888999999999999988899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++|+++ .+++.+.+++.+++++|+|||++|. ..++.++++++++ |+++.+|....      ....+...+
T Consensus       238 -~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~------~~~~~~~~~  310 (376)
T 1e3i_A          238 -ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDV  310 (376)
T ss_dssp             -HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHH
T ss_pred             -HhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC------ccccCHHHh
Confidence             999999998874 1268888888776799999999997 6899999999999 99999987321      224556667


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++ ++.++....+.  .++.++++++++.+|++++  .++.++||+++++||+.+.+++ .+|++|++
T Consensus       311 ~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          311 ILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             hccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            7777 88887654321  2467899999999999975  4567889999999999998877 47999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.8e-32  Score=220.69  Aligned_cols=212  Identities=22%  Similarity=0.279  Sum_probs=178.8

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       156 ~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          156 VAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5788 9999998 889999999999999988899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++++++ .+++.+.+++.+++++|++||++|. ..++.++++++++ |+++.+|.....    .....+...+
T Consensus       233 -~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~  307 (373)
T 2fzw_A          233 -EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----EEIATRPFQL  307 (373)
T ss_dssp             -HHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHHH
T ss_pred             -HcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCC----ceeeeCHHHH
Confidence             999999888774 1268888888887799999999997 6889999999999 999999975421    1123445566


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++ ++.++....+.  .++.++++++++.+|++++  .+..++||+++++||+.+.+++. +|++|++
T Consensus       308 ~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          308 VTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             HTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             hcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            6677 88887654321  2467899999999999884  45678899999999999988775 6999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-32  Score=222.59  Aligned_cols=205  Identities=21%  Similarity=0.253  Sum_probs=174.2

Q ss_pred             cccCCCCC-CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMG-FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~-~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |++ +++. ++|+++++++|||+++.. .++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++
T Consensus       160 ~~~~-P~~~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~  235 (369)
T 1uuf_A          160 VLRI-RHPQEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK  235 (369)
T ss_dssp             CEEC-CSCGGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             EEEC-CCCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            6788 999 9998 889999999999999965 69999999999996 99999999999999999999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|++.++++.+. ++.+.   .. +++|+|||++|.+ .++.++++++++|+++.+|...+.     ....+...++.
T Consensus       236 -~lGa~~vi~~~~~-~~~~~---~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~  304 (369)
T 1uuf_A          236 -ALGADEVVNSRNA-DEMAA---HL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIM  304 (369)
T ss_dssp             -HHTCSEEEETTCH-HHHHT---TT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHT
T ss_pred             -HcCCcEEeccccH-HHHHH---hh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHh
Confidence             8999999988765 54333   22 4799999999985 789999999999999999875421     11345667788


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +++++.++....     .+.++++++++++|++++.+. .+|++++++||+.+.+++..||+||++++
T Consensus       305 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          305 KRRAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             TTCEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             CCcEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999987765     467889999999999998764 58999999999999998888999999864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.4e-32  Score=219.66  Aligned_cols=206  Identities=19%  Similarity=0.208  Sum_probs=175.9

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++| +..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       139 ~~~i-P~~l~~~-~aa-~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  213 (356)
T 1pl8_A          139 CYKL-PDNVTFE-EGA-LIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK  213 (356)
T ss_dssp             EEEC-CTTSCHH-HHH-HHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             EEEC-cCCCCHH-HHH-hhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 9999998 554 557899999999 7789999999999996 9999999999999999 9999999999999999


Q ss_pred             HHhCCCceeecc---ChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHH
Q 027106           81 DKLGFDDAFNYK---EETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLD  156 (228)
Q Consensus        81 ~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  156 (228)
                       ++|++++++++   +. ++.+.+++.+++++|+|||++|++ .++.++++++++|+++.+|....      ....+...
T Consensus       214 -~lGa~~vi~~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~  285 (356)
T 1pl8_A          214 -EIGADLVLQISKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLH  285 (356)
T ss_dssp             -HTTCSEEEECSSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHH
T ss_pred             -HhCCCEEEcCcccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHH
Confidence             99999989887   34 777788777656899999999975 78999999999999999986321      23456677


Q ss_pred             HHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          157 VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      ++.+++++.++....      +.++++++++.+|+++  +.++.+++++++++||+.+.++ ..+|+||++++
T Consensus       286 ~~~~~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~  351 (356)
T 1pl8_A          286 AAIREVDIKGVFRYC------NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDP  351 (356)
T ss_dssp             HHHTTCEEEECCSCS------SCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCT
T ss_pred             HHhcceEEEEecccH------HHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCC
Confidence            888999999876542      4578899999999975  4566788999999999999988 78899999865

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=9.8e-33  Score=222.20  Aligned_cols=201  Identities=20%  Similarity=0.224  Sum_probs=174.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+..|++|+++++++++.++++ 
T Consensus       143 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-  217 (348)
T 3two_A          143 VISV-DKNAPLE-KVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-  217 (348)
T ss_dssp             CEEC-CTTSCHH-HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-
T ss_pred             EEEC-CCCCCHH-HhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-
Confidence            5789 9999999 89999999999999995 569999999999996 99999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCc-cchHHHH-
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAA-PEMLDVI-  158 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~-  158 (228)
                      ++|+++++ . +.+.+        ..++|+|||++|++ .++.++++++++|+++.+|.....     ... .+...++ 
T Consensus       218 ~lGa~~v~-~-~~~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~  282 (348)
T 3two_A          218 SMGVKHFY-T-DPKQC--------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE-----VAPVLSVFDFIH  282 (348)
T ss_dssp             HTTCSEEE-S-SGGGC--------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG-----GCCEEEHHHHHH
T ss_pred             hcCCCeec-C-CHHHH--------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC-----CcccCCHHHHHh
Confidence            99999877 3 22111        12799999999997 999999999999999999975511     122 5566677 


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecCC
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITEE  228 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~~  228 (228)
                      .+++++.|+....     .+.++++++++.+|++++.+ .++|++++++||+.+.+++..||+||+++++
T Consensus       283 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          283 LGNRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             TCSCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             hCCeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            8999999998877     47789999999999999865 6789999999999999999889999999753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=6.4e-32  Score=219.44  Aligned_cols=212  Identities=19%  Similarity=0.266  Sum_probs=178.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       157 ~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          157 VAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             eEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5789 9999998 889999999999999988899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++|+++ .+++.+.+++.+++++|+|||++|. ..++.++++++++ |+++.+|.....    .....+...+
T Consensus       234 -~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~  308 (374)
T 2jhf_A          234 -EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS----QNLSMNPMLL  308 (374)
T ss_dssp             -HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTT----CCEEECTHHH
T ss_pred             -HhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCC----CccccCHHHH
Confidence             999999888774 1267888888887799999999997 6899999999999 999999875421    1123445566


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++ ++.++....+.  .++.++++++++.+|++++  .++.+++++++++||+.+.+++. +|++|+|
T Consensus       309 ~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          309 LSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             HTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             hcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            6777 88887654321  1467899999999999875  45678899999999999988774 6999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-32  Score=219.81  Aligned_cols=211  Identities=18%  Similarity=0.199  Sum_probs=178.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       158 ~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  234 (374)
T 1cdo_A          158 VAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK  234 (374)
T ss_dssp             EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            5788 9999998 889999999999999988899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++++++ .+++.+.+++.+++++|++||++|. ..++.++++++++ |+++.+|...+.     ....+...+
T Consensus       235 -~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-----~~~~~~~~~  308 (374)
T 1cdo_A          235 -VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-----DVATRPIQL  308 (374)
T ss_dssp             -HTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-----CEEECHHHH
T ss_pred             -HhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCC-----CcccCHHHH
Confidence             999999888874 1267888888776789999999997 6899999999999 999999875421     123455666


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++ ++.++....+.  .++.++++++++.+|++++  .+..++||+++++||+.+.+++. +|++|+|
T Consensus       309 ~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          309 IAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             HTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             hcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            6777 88887654321  2467899999999999884  45678899999999999988775 6999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.8e-33  Score=246.58  Aligned_cols=214  Identities=20%  Similarity=0.313  Sum_probs=183.3

Q ss_pred             CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      +++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++ +.+.+ 
T Consensus       310 ~~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-  385 (795)
T 3slk_A          310 MVTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-  385 (795)
T ss_dssp             SEEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-
T ss_pred             HEEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-
Confidence            36789 9999999 99999999999999998889999999999999999999999999999999999999665 54544 


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|+++++++.+. ++.+.+++.+++ |+|+|||+.+++.++.++++++++|+++.+|.....       .........
T Consensus       386 -~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~~-------~~~~~~~~~  456 (795)
T 3slk_A          386 -ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVR-------DPVEVADAH  456 (795)
T ss_dssp             -CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTCC-------CHHHHHHHS
T ss_pred             -hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEecccccc-------CcccccccC
Confidence             3899999999887 999999999988 999999999999999999999999999999864321       111122234


Q ss_pred             hhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +++++.++.+... +...++.++++++++++|++++.+..+||++++++||+.+.+++..||+||++++
T Consensus       457 ~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          457 PGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             SSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             CCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            6777777665432 4455788999999999999999988999999999999999999999999999753

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=7.2e-32  Score=219.04  Aligned_cols=210  Identities=20%  Similarity=0.227  Sum_probs=176.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++.  +|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       158 ~~~i-P~~l~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          158 VAKI-DPKAPLE--SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             EEEE-CTTCCGG--GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             EEEC-CCCCChh--hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            5788 9999888  88899999999999988899999999999995 9999999999999999 8999999999999999


Q ss_pred             HHhCCCceeeccC-hhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHH
Q 027106           81 DKLGFDDAFNYKE-ETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                       ++|+++++++++ .+++.+.+++.+++++|+|||++|. +.++.++++++++ |+++.+|.....    .....+...+
T Consensus       234 -~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~~~~~  308 (373)
T 1p0f_A          234 -ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLLL  308 (373)
T ss_dssp             -HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHHH
T ss_pred             -HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCC----CccccCHHHh
Confidence             999999998874 1268888888887799999999997 6899999999999 999999975421    1123445566


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      +.++ ++.|+....+.   .+.++++++++.+|++++  .+..++|++++++||+.+.+++. +|++|++
T Consensus       309 ~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          309 LTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             HTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             ccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            6677 88887654321   156888999999999884  45678899999999999987764 7999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=3.3e-32  Score=220.30  Aligned_cols=206  Identities=17%  Similarity=0.156  Sum_probs=174.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+ +++. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |++++.++++.++++
T Consensus       148 ~~~i-P~-~s~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  221 (363)
T 3m6i_A          148 CHKI-GN-MSYE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK  221 (363)
T ss_dssp             EEEC-TT-CCHH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred             EEEC-CC-CCHH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 98 8888 66655 6889999999 7899999999999997 99999999999999996 999999999999999


Q ss_pred             HHhCCCceeecc----ChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccch
Q 027106           81 DKLGFDDAFNYK----EETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM  154 (228)
Q Consensus        81 ~~~g~~~~~~~~----~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  154 (228)
                       ++ ++.++++.    +.+++.+.+++.+++ ++|++||++|++ .++.++++++++|+++.+|...+      ....+.
T Consensus       222 -~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~  293 (363)
T 3m6i_A          222 -EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------EIQIPF  293 (363)
T ss_dssp             -HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------CCCCCH
T ss_pred             -Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------CccccH
Confidence             88 65655543    223788899999877 999999999986 88999999999999999997543      224567


Q ss_pred             HHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcC-CCcceEEEEecC
Q 027106          155 LDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQG-GNIGKKVVRITE  227 (228)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvl~~~~  227 (228)
                      ..++.+++++.++...      .+.++++++++++|+++  +.++.++|++++++||+.+.++ ...+|++|++++
T Consensus       294 ~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          294 MRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            7888999999988755      25678899999999994  4566788999999999999988 567899999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.5e-33  Score=220.61  Aligned_cols=213  Identities=20%  Similarity=0.289  Sum_probs=171.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPKKGE-KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. ++|.+++++.|||.+++.  ..++++|+ +|||+|++|++|++++|+|+..|++|++++++++++++
T Consensus       112 ~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~  189 (328)
T 1xa0_A          112 LVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY  189 (328)
T ss_dssp             CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            5788 9999999 899999999999988753  46899997 99999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|+++++|+++. + .+.+++.+++++|++|||+|++.+..++++++++|+++.+|...+.     ....+...++
T Consensus       190 ~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~  261 (328)
T 1xa0_A          190 LR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFI  261 (328)
T ss_dssp             HH-HTTCSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHH
T ss_pred             HH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCC-----CCCCchhhhh
Confidence            99 8999998887754 3 3444555545899999999999999999999999999999975432     1234456677


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      .+++++.|+..... .....+.++.+.+++.+| +++. ..+++++++++||+.+.+++..||+||+++
T Consensus       262 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          262 LRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI-AQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             hcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            89999998753222 223356778888888888 7764 578899999999999999988899999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-32  Score=217.47  Aligned_cols=207  Identities=18%  Similarity=0.181  Sum_probs=175.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++| +..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ 
T Consensus       136 ~~~i-P~~~~~~-~aa-~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-  209 (352)
T 1e3j_A          136 CHKL-PDNVSLE-EGA-LLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-  209 (352)
T ss_dssp             EEEC-CTTSCHH-HHH-THHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-
T ss_pred             eEEC-cCCCCHH-HHH-hhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-
Confidence            5788 9999988 554 557899999999 7789999999999996 99999999999999999999999999999999 


Q ss_pred             HhCCCceeeccC-hhhHHHHHHHHCC---C-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchH
Q 027106           82 KLGFDDAFNYKE-ETDLKAALKRYFP---D-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML  155 (228)
Q Consensus        82 ~~g~~~~~~~~~-~~~~~~~~~~~~~---~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  155 (228)
                      ++|+++++++++ . ++.+.+++.++   + ++|++||++|.. .++.++++++++|+++.+|....      ....+..
T Consensus       210 ~lGa~~~~~~~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~  282 (352)
T 1e3j_A          210 NCGADVTLVVDPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLV  282 (352)
T ss_dssp             HTTCSEEEECCTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHH
T ss_pred             HhCCCEEEcCcccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHH
Confidence            999999888874 4 66777777664   4 899999999975 78999999999999999986331      2245567


Q ss_pred             HHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--cccceecccCcHHHHHHHhHcCC-CcceEEEEecC
Q 027106          156 DVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--PLEDISDGVESIPSAFTGLFQGG-NIGKKVVRITE  227 (228)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvl~~~~  227 (228)
                      .++.+++++.++....      +.++++++++.+|+++  +.++.+||++++++||+.+.+++ ..+|+||+++.
T Consensus       283 ~~~~~~~~i~g~~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          283 NACAREIDIKSVFRYC------NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             HHHTTTCEEEECCSCS------SCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HHHhcCcEEEEeccch------HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            7888999999876542      4578899999999975  45667889999999999999988 68999999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=5e-33  Score=224.80  Aligned_cols=205  Identities=17%  Similarity=0.102  Sum_probs=175.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ 
T Consensus       146 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-  220 (360)
T 1piw_A          146 VVPI-PENIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-  220 (360)
T ss_dssp             EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-
T ss_pred             eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-
Confidence            5788 9999998 889999999999999955 89999999999998 99999999999999999999999999999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch---hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA---EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++|+++++++.+..++.+.+.    +++|+|||++|.   ..++.++++++++|+++.+|...+  .    ...+...++
T Consensus       221 ~lGa~~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~--~----~~~~~~~~~  290 (360)
T 1piw_A          221 KMGADHYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ--H----EMLSLKPYG  290 (360)
T ss_dssp             HHTCSEEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS--S----CCEEECGGG
T ss_pred             HcCCCEEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC--c----cccCHHHHH
Confidence            899999888764213333332    479999999997   688899999999999999987542  1    123444566


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCc--HHHHHHHhHcCCCcceEEEEecC
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVES--IPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~--~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      .+++++.++....     .+.++++++++.+|++++.+ .++++++  +++||+.+.+++..||+||++++
T Consensus       291 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          291 LKAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             CBSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             hCCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            7889999887765     57789999999999999887 7889999  99999999998888999999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-31  Score=219.73  Aligned_cols=214  Identities=18%  Similarity=0.180  Sum_probs=176.9

Q ss_pred             cccCCCCCCCcchh----hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 027106            2 LRKFDPMGFPLSYQ----VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKV   76 (228)
Q Consensus         2 ~~~v~P~~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~   76 (228)
                      ++++ |+++++. +    +|++++++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++
T Consensus       148 ~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          148 LLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             CEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             EEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence            5788 9888877 5    6899999999999995 789999999999995 9999999999999999 799999999999


Q ss_pred             HHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh----------------HHHHHHHccccCcEEEEEee
Q 027106           77 TLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE----------------MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~----------------~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++++ ++|++ ++++++..++.+.+++.+++ ++|+|||++|++                .++.++++++++|+++.+|.
T Consensus       224 ~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~  301 (398)
T 1kol_A          224 AHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL  301 (398)
T ss_dssp             HHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             HHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence            9999 99996 78876542478888888876 899999999974                68999999999999999986


Q ss_pred             ec-ccCCC------cCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc---cccceecccCcHHHHH
Q 027106          140 IS-EYTDG------KKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY---PLEDISDGVESIPSAF  209 (228)
Q Consensus       140 ~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~---~~~~~~~~~~~~~~A~  209 (228)
                      .. +....      .....+++..++.+++++.+.....     .+.++++++++.+|+++   +.++.+++++++++||
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~  376 (398)
T 1kol_A          302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGY  376 (398)
T ss_dssp             CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCH-----HHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHH
T ss_pred             ccCCcccccccccccccccccHHHHhhcccEEEecccCh-----HHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHH
Confidence            52 11100      0112445667788899888765432     46788999999999998   4567888999999999


Q ss_pred             HHhHcCCCcceEEEEecC
Q 027106          210 TGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       210 ~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+.+++. +|+||+++.
T Consensus       377 ~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          377 GEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHHHTCS-CEEEECTTC
T ss_pred             HHHhCCCc-eEEEEEeCC
Confidence            99998887 999998853

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.7e-33  Score=225.14  Aligned_cols=214  Identities=20%  Similarity=0.312  Sum_probs=175.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHH--hcCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFE--IGKPKKGE-KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL   78 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~   78 (228)
                      ++++ |+++++. ++|.+++++.|||.+++.  ..++++|+ +|||+|++|++|++++|+|+..|++|+++++++++++.
T Consensus       113 ~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~  190 (330)
T 1tt7_A          113 LVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY  190 (330)
T ss_dssp             EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             eEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            5788 9999999 899999999999988753  46889997 99999999999999999999999999999999999999


Q ss_pred             HHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           79 LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++ ++|+++++|+++. + .+.+++.+++++|++|||+|++.+..++++++++|+++.+|...+.     ....+...++
T Consensus       191 ~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~  262 (330)
T 1tt7_A          191 LK-QLGASEVISREDV-Y-DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFI  262 (330)
T ss_dssp             HH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHH
T ss_pred             HH-HcCCcEEEECCCc-h-HHHHHHhhcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHH
Confidence            99 8999988876532 2 1223333444899999999999999999999999999999975431     1234455677


Q ss_pred             hhhceeeceecccc-hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADH-LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.|++.... .....+.++.+.+++.+|++++.++.++|++++++||+.+.+++..||+||++
T Consensus       263 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          263 LRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             hcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            89999998753322 22335678888888889999988888899999999999999888889999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.8e-32  Score=224.27  Aligned_cols=213  Identities=17%  Similarity=0.238  Sum_probs=178.9

Q ss_pred             cccCCCCCCCcchh----hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 027106            2 LRKFDPMGFPLSYQ----VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKV   76 (228)
Q Consensus         2 ~~~v~P~~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~   76 (228)
                      ++++ |+++++. +    +|+++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++
T Consensus       148 ~~~i-P~~~~~~-~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  223 (398)
T 2dph_A          148 LLKF-GDKEQAM-EKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERL  223 (398)
T ss_dssp             CEEC-SSHHHHH-HTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             EEEC-CCCCChh-hhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            5788 9998888 5    789999999999999 6799999999999996 9999999999999999 999999999999


Q ss_pred             HHHHHHhCCCceeeccChhhH-HHHHHHHCCC-CccEEEcCcchh---------------HHHHHHHccccCcEEEEEee
Q 027106           77 TLLKDKLGFDDAFNYKEETDL-KAALKRYFPD-GIDIYFDNVGAE---------------MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~-~~d~vld~~g~~---------------~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++++ ++|++ ++++.+. ++ .+.+++.+++ ++|+|||++|+.               .++.++++++++|+++.+|.
T Consensus       224 ~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~  300 (398)
T 2dph_A          224 KLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI  300 (398)
T ss_dssp             HHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred             HHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence            9999 99995 7888765 65 7888888877 899999999974               68999999999999999987


Q ss_pred             ecccCCC-------cCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc--c--ccceecccCcHHHH
Q 027106          140 ISEYTDG-------KKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY--P--LEDISDGVESIPSA  208 (228)
Q Consensus       140 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~--~--~~~~~~~~~~~~~A  208 (228)
                      .......       .....++...++.+++++.++....     ++.++++++++.+|+++  +  .++.+++|+++++|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A  375 (398)
T 2dph_A          301 YVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDG  375 (398)
T ss_dssp             CCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHH
T ss_pred             ccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHH
Confidence            5210000       0112345667788999998876543     35688999999999998  6  46678899999999


Q ss_pred             HHHhHcCCCcceEEEEecC
Q 027106          209 FTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       209 ~~~~~~~~~~gkvvl~~~~  227 (228)
                      |+.+.+++. +|+||+++.
T Consensus       376 ~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          376 YAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HHHHHTTCS-CEEEECTTS
T ss_pred             HHHHhcCCc-eEEEEecCc
Confidence            999998887 999998854

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.9e-31  Score=214.64  Aligned_cols=203  Identities=21%  Similarity=0.252  Sum_probs=178.6

Q ss_pred             CCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC
Q 027106            8 MGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFD   86 (228)
Q Consensus         8 ~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~   86 (228)
                      +++++. ++|++++++.|||+++. .+++++|++|||+|++|++|++++|+++.. |++|+++++++++.+.++ ++|++
T Consensus       142 ~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~  218 (347)
T 1jvb_A          142 RRLNAV-EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGAD  218 (347)
T ss_dssp             SSSCHH-HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCS
T ss_pred             CCCCHH-HcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCC
Confidence            467877 78899999999999994 589999999999999779999999999999 999999999999999998 89999


Q ss_pred             ceeeccChhhHHHHHHHHCC-CCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhcee
Q 027106           87 DAFNYKEETDLKAALKRYFP-DGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKF  164 (228)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~-~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (228)
                      .++++.+. ++.+.+.+.+. +++|++||++|++ .++.++++++++|+++.+|....     .. ..+...++.+++++
T Consensus       219 ~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~-~~~~~~~~~~~~~i  291 (347)
T 1jvb_A          219 YVINASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-----DL-HYHAPLITLSEIQF  291 (347)
T ss_dssp             EEEETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-----CC-CCCHHHHHHHTCEE
T ss_pred             EEecCCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC-----CC-CCCHHHHHhCceEE
Confidence            88888776 77777888876 5899999999986 89999999999999999987541     12 45566778899999


Q ss_pred             eceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          165 QGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .++....     ++.++++++++.+|++++.++.++|++++++||+.+.+++..||+||++
T Consensus       292 ~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          292 VGSLVGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             EECCSCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEeccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            9987765     5788999999999999998888899999999999999988889999974

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=7.5e-32  Score=217.64  Aligned_cols=205  Identities=20%  Similarity=0.207  Sum_probs=174.6

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|+++++++|||+++. ..+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++
T Consensus       146 ~~~~-P~~ls~~-~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~  221 (357)
T 2cf5_A          146 VVKI-PEGMAVE-QAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL  221 (357)
T ss_dssp             EEEC-CSSCCHH-HHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred             EEEC-cCCCCHH-HhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            5788 9999998 88999999999999995 57888 9999999995 99999999999999999999999998888877


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      +++|+++++++++. +   .+++.+ +++|+|||++|.+ .++.++++++++|+++.+|...+.     ....+.. ++.
T Consensus       222 ~~lGa~~vi~~~~~-~---~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~  290 (357)
T 2cf5_A          222 QDLGADDYVIGSDQ-A---KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LML  290 (357)
T ss_dssp             TTSCCSCEEETTCH-H---HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHH
T ss_pred             HHcCCceeeccccH-H---HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHh
Confidence            58999999888753 3   344444 3799999999975 789999999999999999975421     1114455 888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +++++.|+....     .+.++++++++.+|++++.+ .++|++++++||+.+.+++..||+||++++
T Consensus       291 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          291 GRKVITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             CccEEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            999999988765     46789999999999999876 578999999999999998888999999865

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.1e-31  Score=215.99  Aligned_cols=206  Identities=24%  Similarity=0.295  Sum_probs=176.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.+ .++.|||+++ +.+++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++
T Consensus       136 ~~~i-P~~~~~~-~aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~  209 (348)
T 2d8a_A          136 IWKN-PKSIPPE-YATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK  209 (348)
T ss_dssp             EEEC-CTTSCHH-HHTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH
T ss_pred             eEEC-CCCCCHH-HHHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 9999988 56555 5889999999 77899 9999999998 9999999999999999 9999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-HHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-LDV  157 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~  157 (228)
                       ++|+++++++++. ++.+.+++.+++ ++|++||++|. ..++.++++++++|+++.+|...+      ....+. ..+
T Consensus       210 -~~Ga~~~~~~~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~  281 (348)
T 2d8a_A          210 -KVGADYVINPFEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------KVTIDFNNLI  281 (348)
T ss_dssp             -HHTCSEEECTTTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHT
T ss_pred             -HhCCCEEECCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CcccCchHHH
Confidence             9999999998876 888889988877 89999999997 788999999999999999997542      124555 667


Q ss_pred             HhhhceeeceecccchhHHHHHHHHHHHHHHcCCC--ccccceecc-cCcHHHHHHHhHcCCCcceEEEEec
Q 027106          158 IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI--YPLEDISDG-VESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i--~~~~~~~~~-~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      +.+++++.|+.....    .+.++++++++.+|++  ++.++.++| ++++++||+.+.+ ...+|+||+++
T Consensus       282 ~~~~~~i~g~~~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          282 IFKALTIYGITGRHL----WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             TTTTCEEEECCCCCS----HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HhCCcEEEEecCCCc----HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            788999998765431    4678999999999996  455667889 9999999999977 56789999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=9.2e-32  Score=216.18  Aligned_cols=198  Identities=23%  Similarity=0.238  Sum_probs=155.9

Q ss_pred             CCCCcchhhhccchhHHHHHHHHHHh----cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH
Q 027106            8 MGFPLSYQVGILGFSGLTAYAGLFEI----GKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         8 ~~~~~~~~aa~l~~~~~ta~~~l~~~----~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~   81 (228)
                      +++++. ++|+++++++|||+++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|++++++++++++++ 
T Consensus       138 ~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-  213 (344)
T 2h6e_A          138 NSLSPV-EAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-  213 (344)
T ss_dssp             SSSCHH-HHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-
T ss_pred             CCCCHH-HhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-
Confidence            577888 7889999999999999664    288 9999999998 99999999999999  999999999999999999 


Q ss_pred             HhCCCceeeccC-hhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHH
Q 027106           82 KLGFDDAFNYKE-ETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVI  158 (228)
Q Consensus        82 ~~g~~~~~~~~~-~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  158 (228)
                      ++|+++++++++ . ++.   .+++++ ++|+|||++|++ .++.++++++++|+++.+|...+      ....+...++
T Consensus       214 ~lGa~~vi~~~~~~-~~~---~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~  283 (344)
T 2h6e_A          214 ELGADYVSEMKDAE-SLI---NKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK------RVSLEAFDTA  283 (344)
T ss_dssp             HHTCSEEECHHHHH-HHH---HHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHH
T ss_pred             HhCCCEEeccccch-HHH---HHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC------CcccCHHHHh
Confidence            999999888764 3 433   344445 899999999986 99999999999999999987542      1245666778


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                      .+++++.++....     ++.++++++++.+|++++.+ .+++++++++||+.+.+++..||+||++
T Consensus       284 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          284 VWNKKLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             hCCcEEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            8999999987765     57789999999999999988 8899999999999999888889999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.6e-33  Score=222.63  Aligned_cols=199  Identities=15%  Similarity=0.125  Sum_probs=154.0

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|++|++++ ++++.++++ 
T Consensus       109 ~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-  182 (315)
T 3goh_A          109 VMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-  182 (315)
T ss_dssp             EEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-
T ss_pred             hccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-
Confidence            5788 9999999 8888999999999999 8899999999999998 9999999999999999999999 889999999 


Q ss_pred             HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhh
Q 027106           82 KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKR  161 (228)
Q Consensus        82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  161 (228)
                      ++|++++++ + .       .++ ++++|++|||+|++....++++++++|+++.+|.....         .....+.++
T Consensus       183 ~lGa~~v~~-d-~-------~~v-~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---------~~~~~~~~~  243 (315)
T 3goh_A          183 KRGVRHLYR-E-P-------SQV-TQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPA---------PIDPAFTRT  243 (315)
T ss_dssp             HHTEEEEES-S-G-------GGC-CSCEEEEECC-------TTGGGEEEEEEEEEECCC-------------------CC
T ss_pred             HcCCCEEEc-C-H-------HHh-CCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCCc---------cccchhhhc
Confidence            999988774 1 1       112 44899999999998778899999999999999754321         111222334


Q ss_pred             ceeeceeccc-----chh---HHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          162 IKFQGFLAAD-----HLN---LYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       162 ~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+....+..     .+.   ..++.++++++++++|++++.++.++|++++++||+.+.  ...||+||++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          244 ISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             SEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             ceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            4444333221     111   345678999999999999999999999999999999998  666899999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.98  E-value=4e-32  Score=218.24  Aligned_cols=206  Identities=17%  Similarity=0.207  Sum_probs=175.4

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|.+ .++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++
T Consensus       132 ~~~i-P~~~~~~-~aa~~-~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~  206 (343)
T 2dq4_A          132 AWVN-PKDLPFE-VAAIL-EPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR  206 (343)
T ss_dssp             EEEE-CTTSCHH-HHTTH-HHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT
T ss_pred             eEEC-CCCCCHH-HHHhh-hHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5788 9999998 55554 7888999999547899 9999999998 9999999999999999 9999999999999998


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-HHHH
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-LDVI  158 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~  158 (228)
                       ++ +++++++++. ++.+.+++.+++++|++||++|+ ..++.++++++++|+++.+|...+      ....+. ..++
T Consensus       207 -~l-a~~v~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~  277 (343)
T 2dq4_A          207 -PY-ADRLVNPLEE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELV  277 (343)
T ss_dssp             -TT-CSEEECTTTS-CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTG
T ss_pred             -Hh-HHhccCcCcc-CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHH
Confidence             88 8888988876 88888888773389999999998 789999999999999999987432      124555 6677


Q ss_pred             hhhceeeceecccchhHHHHHHHHHHHHHHcCCC--ccccceecccCcHHHHHHHhHcCCCcceEEEEec
Q 027106          159 YKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAI--YPLEDISDGVESIPSAFTGLFQGGNIGKKVVRIT  226 (228)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i--~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~  226 (228)
                      .+++++.|+.....    ++.++++++++++|++  ++.++.++|++++++||+.+.+++. ||+||+++
T Consensus       278 ~~~~~i~g~~~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          278 MRGITAFGIAGRRL----WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             GGTCEEEECCSCCT----THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             hCceEEEEeecCCC----HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            89999999876521    4678899999999995  5666778899999999999998877 99999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.98  E-value=5.9e-32  Score=221.59  Aligned_cols=207  Identities=18%  Similarity=0.207  Sum_probs=176.3

Q ss_pred             cccCCCCCCCc-----chhhhccchhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 027106            2 LRKFDPMGFPL-----SYQVGILGFSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE   74 (228)
Q Consensus         2 ~~~v~P~~~~~-----~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~   74 (228)
                      ++++ |++++.     ..++|+++++++|||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++
T Consensus       172 ~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~  249 (404)
T 3ip1_A          172 AWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEV  249 (404)
T ss_dssp             EEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred             eEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            4677 877753     235899999999999999655 48999999999997 9999999999999999 9999999999


Q ss_pred             HHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchh--HHHHHHHcc----ccCcEEEEEeeecccCCCc
Q 027106           75 KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAE--MQEAAIANM----NTYGRVAVCGVISEYTDGK  147 (228)
Q Consensus        75 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~  147 (228)
                      ++++++ ++|+++++++.+. ++.+.+++.+++ ++|+||||+|++  .+..+++++    +++|+++.+|...+     
T Consensus       250 ~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~-----  322 (404)
T 3ip1_A          250 RRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA-----  322 (404)
T ss_dssp             HHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS-----
T ss_pred             HHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC-----
Confidence            999999 9999999999876 899999999988 999999999986  677777777    99999999997653     


Q ss_pred             CCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCcc--ccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          148 KRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYP--LEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                       ....+...++.+++++.|+.....    .+.++++++++++| +++  .++.+++|+++++||+.+.    .||+||++
T Consensus       323 -~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~  392 (404)
T 3ip1_A          323 -KIPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKV  392 (404)
T ss_dssp             -CEEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCE
T ss_pred             -CCcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEec
Confidence             225677888899999999875432    35678999999999 754  5667889999999999987    57888887


Q ss_pred             cC
Q 027106          226 TE  227 (228)
Q Consensus       226 ~~  227 (228)
                      ++
T Consensus       393 ~~  394 (404)
T 3ip1_A          393 TM  394 (404)
T ss_dssp             EE
T ss_pred             CC
Confidence            53

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.97  E-value=4.1e-31  Score=213.98  Aligned_cols=205  Identities=17%  Similarity=0.180  Sum_probs=175.2

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++++.|||+++. ..+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.++
T Consensus       153 ~~~~-P~~ls~~-~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  228 (366)
T 1yqd_A          153 IIRF-PDNMPLD-GGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL  228 (366)
T ss_dssp             CEEC-CTTSCTT-TTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred             EEEC-CCCCCHH-HhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            6789 9999999 88999999999999995 46788 9999999995 99999999999999999999999999988876


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      +++|++.++++.+. +   .+.+.+ +++|+|||++|.. .++.++++++++|+++.+|...+      ....+...++.
T Consensus       229 ~~lGa~~v~~~~~~-~---~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~  297 (366)
T 1yqd_A          229 KNFGADSFLVSRDQ-E---QMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIA  297 (366)
T ss_dssp             HTSCCSEEEETTCH-H---HHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHT
T ss_pred             HhcCCceEEeccCH-H---HHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHh
Confidence            58999988888753 3   344444 3799999999975 78999999999999999987542      12355677888


Q ss_pred             hhceeeceecccchhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          160 KRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +++++.++....     .+.++++++++.+|++++.+ .++||+++++||+.+.+++..||+||++++
T Consensus       298 ~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          298 GRKIVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             TTCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             CCcEEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            999999987765     46788999999999999876 578999999999999999888999998753

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.97  E-value=3e-32  Score=220.01  Aligned_cols=202  Identities=13%  Similarity=0.157  Sum_probs=173.7

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHcCCE-EEEEeCC
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKG------EKVFVSAASGSVGHLV-GQYA-KLFGCY-VVGSAGS   72 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g------~~VlI~ga~g~~G~~a-~~~a-~~~g~~-V~~~~~~   72 (228)
                      ++++ |++++ +  +|+++++++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++
T Consensus       135 ~~~i-P~~~~-~--~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~  208 (357)
T 2b5w_A          135 LVRI-PRSQA-E--LGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRR  208 (357)
T ss_dssp             EEEC-CGGGS-T--TGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECC
T ss_pred             eEEC-CCCcc-h--hhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCC
Confidence            5788 99998 6  677999999999999 67899999      99999998 9999999 9999 999996 9999998


Q ss_pred             HH---HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcC
Q 027106           73 KE---KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKK  148 (228)
Q Consensus        73 ~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  148 (228)
                      ++   ++++++ ++|++++ ++++. ++.+ +++. ++++|+|||++|++ .+..++++++++|+++.+|...+.     
T Consensus       209 ~~~~~~~~~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----  278 (357)
T 2b5w_A          209 DRPDPTIDIIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----  278 (357)
T ss_dssp             CSSCHHHHHHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----
T ss_pred             cccHHHHHHHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----
Confidence            88   999998 9999988 88765 6666 7776 45899999999985 889999999999999999976421     


Q ss_pred             CCccchHHH----HhhhceeeceecccchhHHHHHHHHHHHHHHcC--C-CccccceecccCcHHHHHHHhHcCCCcceE
Q 027106          149 RAAPEMLDV----IYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG--A-IYPLEDISDGVESIPSAFTGLFQGGNIGKK  221 (228)
Q Consensus       149 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-i~~~~~~~~~~~~~~~A~~~~~~~~~~gkv  221 (228)
                      ...++...+    +.+++++.++....     ++.++++++++++|  + +++.++.+++++++++||+.+   ...||+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKv  350 (357)
T 2b5w_A          279 AFEVDAGAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKT  350 (357)
T ss_dssp             CCCCCHHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEE
T ss_pred             CceecHHHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceE
Confidence            224555666    78999999987765     57899999999999  8 677788889999999999988   346899


Q ss_pred             EEEecC
Q 027106          222 VVRITE  227 (228)
Q Consensus       222 vl~~~~  227 (228)
                      ||++++
T Consensus       351 vi~~~~  356 (357)
T 2b5w_A          351 AIEFST  356 (357)
T ss_dssp             EEECCC
T ss_pred             EEEecC
Confidence            999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.97  E-value=4.8e-31  Score=214.29  Aligned_cols=217  Identities=23%  Similarity=0.314  Sum_probs=168.5

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcC----CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGK----PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT   77 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~   77 (228)
                      ++++ |+++++. ++|+++++++|||+++.+.++    +++|++|||+||+|++|++++|+|+..|++|++++ ++++.+
T Consensus       145 ~~~i-P~~ls~~-~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          145 VSHK-PKSLTHT-QAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             EEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             eeeC-CCCCCHH-HHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            5788 9999998 889999999999999977788    99999999999999999999999999999999998 678889


Q ss_pred             HHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh--HHHHHHHccccCcEEEEEeeecccCCCcCCCccch-
Q 027106           78 LLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-  154 (228)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-  154 (228)
                      +++ ++|++.++++++. ++.+.+.+.  +++|++|||+|++  .+..++++++++|+++.+|................ 
T Consensus       222 ~~~-~lGa~~v~~~~~~-~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~  297 (375)
T 2vn8_A          222 LVR-KLGADDVIDYKSG-SVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGML  297 (375)
T ss_dssp             HHH-HTTCSEEEETTSS-CHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHH
T ss_pred             HHH-HcCCCEEEECCch-HHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhh
Confidence            998 9999999998876 777776653  4799999999986  45888999999999999986432100000000000 


Q ss_pred             ---HHHHhhhc-ee-eceeccc-chhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEe
Q 027106          155 ---LDVIYKRI-KF-QGFLAAD-HLNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRI  225 (228)
Q Consensus       155 ---~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~  225 (228)
                         ..++.+++ .+ .+..+.. +....++.++++++++++|++++.++.++|++++++||+.+.+++..||+||++
T Consensus       298 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          298 QTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             eeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence               12233333 11 2222110 001125678999999999999998888899999999999999988889999986

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.97  E-value=7.1e-32  Score=219.33  Aligned_cols=212  Identities=15%  Similarity=0.136  Sum_probs=176.1

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSA-ASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~g-a~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++++ |+++++. ++|++++.++|||+++. ... ++|++|||+| |+|++|++++|+|+..|++|+++++++++.++++
T Consensus       138 ~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~-~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~  213 (379)
T 3iup_A          138 CLVL-PEGATPA-DGASSFVNPLTALGMVE-TMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK  213 (379)
T ss_dssp             EEEC-CTTCCHH-HHTTSSHHHHHHHHHHH-HHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH
T ss_pred             eEEC-CCCCCHH-HHHhhhhhHHHHHHHHH-Hhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            5788 9999999 89999999999998874 445 8999999996 7899999999999999999999999999999999


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccc-----cC-----------cEEEEEeeecc
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMN-----TY-----------GRVAVCGVISE  142 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~-----~~-----------G~~v~~g~~~~  142 (228)
                       ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+ ..++.++++++     ++           |+++.+|....
T Consensus       214 -~lGa~~~~~~~~~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~  291 (379)
T 3iup_A          214 -AQGAVHVCNAASP-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT  291 (379)
T ss_dssp             -HTTCSCEEETTST-THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE
T ss_pred             -hCCCcEEEeCCCh-HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC
Confidence             9999999999887 899999998877 99999999998 46678888875     44           66666655332


Q ss_pred             cCCCcCCCccchHHHHhhhceeeceecccc-----hhHHHHHHHHHHHHHHcCCCccccceecccCcH--HHHHHHhHcC
Q 027106          143 YTDGKKRAAPEMLDVIYKRIKFQGFLAADH-----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESI--PSAFTGLFQG  215 (228)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~--~~A~~~~~~~  215 (228)
                      .       +.+....+.+++++.|++...+     +...++.++.+.+++.+ .+++.++.+++++++  ++||+.+.++
T Consensus       292 ~-------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~  363 (379)
T 3iup_A          292 S-------PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKR  363 (379)
T ss_dssp             E-------EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTC
T ss_pred             C-------ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcC
Confidence            1       1222334567889999877654     33445677888888888 588888899999999  9999999999


Q ss_pred             CCcceEEEEecC
Q 027106          216 GNIGKKVVRITE  227 (228)
Q Consensus       216 ~~~gkvvl~~~~  227 (228)
                      +..||+||+++.
T Consensus       364 ~~~gKvVv~~~~  375 (379)
T 3iup_A          364 ATGEKYLINPNK  375 (379)
T ss_dssp             CTTCCEEEETTT
T ss_pred             CCCceEEEeCCC
Confidence            989999999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.97  E-value=1.7e-30  Score=210.45  Aligned_cols=204  Identities=16%  Similarity=0.126  Sum_probs=169.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHH--H--hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLF--E--IGKPK--K-------GEKVFVSAASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~--~--~~~~~--~-------g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      ++++ |++++ . + |+++.++.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+|+..|++|++
T Consensus       135 ~~~i-P~~l~-~-~-Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~  209 (366)
T 2cdc_A          135 LVKI-PKSIE-D-I-GILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWM  209 (366)
T ss_dssp             EEEE-CGGGT-T-T-GGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEE
T ss_pred             eEEC-cCCcc-h-h-hhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence            5788 99999 7 4 568899999999996  4  78898  8       999999998 99999999999999999999


Q ss_pred             EeCCH---HHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HH-HHHHHccccCcEEEEEeeeccc
Q 027106           69 SAGSK---EKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQ-EAAIANMNTYGRVAVCGVISEY  143 (228)
Q Consensus        69 ~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~  143 (228)
                      +++++   ++.++++ ++|++.+ | .+  ++.+.+.+ +++++|++||++|.. .+ +.++++++++|+++.+|...+.
T Consensus       210 ~~~~~~~~~~~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~  283 (366)
T 2cdc_A          210 ANRREPTEVEQTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG  283 (366)
T ss_dssp             EESSCCCHHHHHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC
T ss_pred             EeCCccchHHHHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC
Confidence            99988   8889998 9999877 6 43  44555555 335899999999984 77 9999999999999999875431


Q ss_pred             CCCcCCCccchHH---HHhhhceeeceecccchhHHHHHHHHHHHHHHcCC------CccccceecccCcHHHHHHHh-H
Q 027106          144 TDGKKRAAPEMLD---VIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGA------IYPLEDISDGVESIPSAFTGL-F  213 (228)
Q Consensus       144 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------i~~~~~~~~~~~~~~~A~~~~-~  213 (228)
                           ....+...   ++.+++++.|+....     ++.++++++++.+|+      +++.++.+++++++++||+.+ .
T Consensus       284 -----~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~  353 (366)
T 2cdc_A          284 -----SVPLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLRE  353 (366)
T ss_dssp             -----EEEEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHC
T ss_pred             -----ccccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhh
Confidence                 12445555   788999999987655     578899999999999      556777889999999999983 3


Q ss_pred             cCCCcceEEEEec
Q 027106          214 QGGNIGKKVVRIT  226 (228)
Q Consensus       214 ~~~~~gkvvl~~~  226 (228)
                      ++...||+||+++
T Consensus       354 ~~~~~gKvvi~~~  366 (366)
T 2cdc_A          354 KEHGEIKIRILWE  366 (366)
T ss_dssp             CCTTCCEEEEECC
T ss_pred             hcCCceEEEEecC
Confidence            3556789999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=1.4e-29  Score=242.03  Aligned_cols=218  Identities=23%  Similarity=0.330  Sum_probs=186.3

Q ss_pred             cccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 027106            2 LRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD   81 (228)
Q Consensus         2 ~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~   81 (228)
                      ++++ |+++++. ++|+++++++|||+++...+++++|++|||+||+|++|++++|+|+..|++|++++.++++.+.+++
T Consensus      1633 v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~ 1710 (2512)
T 2vz8_A         1633 TWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQA 1710 (2512)
T ss_dssp             EEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             EEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHh
Confidence            5788 9999999 8999999999999999888999999999999999999999999999999999999999999999984


Q ss_pred             H---hCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH
Q 027106           82 K---LGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV  157 (228)
Q Consensus        82 ~---~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  157 (228)
                      .   +|+++++++++. ++.+.+++.+++ |+|+|||+.+++.++.++++++++|+++.+|......     ........
T Consensus      1711 ~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~-----~~~~~~~~ 1784 (2512)
T 2vz8_A         1711 RFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN-----NHALGMAV 1784 (2512)
T ss_dssp             HCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT-----TCEEEGGG
T ss_pred             hcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc-----cCcccccc
Confidence            2   678899998886 899999998887 9999999999899999999999999999999644211     11222345


Q ss_pred             Hhhhceeeceecccc----hhHHHHHHHHHHHHHHcCCCccccceecccCcHHHHHHHhHcCCCcceEEEEecC
Q 027106          158 IYKRIKFQGFLAADH----LNLYQDFISTTCNHLRSGAIYPLEDISDGVESIPSAFTGLFQGGNIGKKVVRITE  227 (228)
Q Consensus       158 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvl~~~~  227 (228)
                      +.+++++.++....+    +...++.++.+.+++.+|.+++.+..+||++++++||+.+.+++..||+||++++
T Consensus      1785 ~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1785 FLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             GGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred             cccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence            568899888776542    3344566777777778899999888899999999999999999988999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.96  E-value=6e-28  Score=179.45  Aligned_cols=190  Identities=21%  Similarity=0.343  Sum_probs=145.0

Q ss_pred             CcccCCCCCCCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106            1 MLRKFDPMGFPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus         1 ~~~~v~P~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      .++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++
T Consensus         3 ~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            3 LVVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             ceeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            36789 9999999 888999999999999977789999999999999999999999999999999999999999988888


Q ss_pred             HHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           81 DKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                       ++|.+.+++..+. +..+.+.+.+.+ ++|+++|++|...+..++++++++|+++.+|......    ....+.. .+.
T Consensus        81 -~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~-~~~  153 (198)
T 1pqw_A           81 -RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGLA-ALA  153 (198)
T ss_dssp             -TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEGG-GGT
T ss_pred             -HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCChh-Hhc
Confidence             8998888887766 777778777765 8999999999889999999999999999999754211    1112222 345


Q ss_pred             hhceeeceeccc----chhHHHHHHHHHHHHHHcCCCcccccee
Q 027106          160 KRIKFQGFLAAD----HLNLYQDFISTTCNHLRSGAIYPLEDIS  199 (228)
Q Consensus       160 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~i~~~~~~~  199 (228)
                      +++++.++....    .+....+.++++++++++|++++.+..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          154 KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             TTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             CCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            778877654311    1222357899999999999999876543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.23  E-value=4.5e-11  Score=96.17  Aligned_cols=145  Identities=14%  Similarity=0.050  Sum_probs=99.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +.+...  +++.+.. ++.+.+.     ++|+|++|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999997 99999999999999999999999999999988 665543  2333322 4444443     589999999


Q ss_pred             chhH-------HHHHHHccccCcEEEEEeeecccCCCcC-CCccchHHHHhhhceeeceecccc-------hhHHHHHHH
Q 027106          117 GAEM-------QEAAIANMNTYGRVAVCGVISEYTDGKK-RAAPEMLDVIYKRIKFQGFLAADH-------LNLYQDFIS  181 (228)
Q Consensus       117 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  181 (228)
                      +.+.       ....++.++++|.++.++...+.+++.. ...++...+..+++++.+......       ....+..++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            7542       6778899999999999987654432110 112222223346677666432111       111245678


Q ss_pred             HHHHHHHcCC
Q 027106          182 TTCNHLRSGA  191 (228)
Q Consensus       182 ~~~~~~~~g~  191 (228)
                      .+++++.+|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8899998884

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=99.19  E-value=2e-10  Score=92.90  Aligned_cols=147  Identities=14%  Similarity=0.068  Sum_probs=95.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|++|+|+|+ |++|..+++.++.+|++|+++++++++.+.+++.+|.....+.....++.+.+.     ++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5889999996 999999999999999999999999999888883477754333322224444443     4899999987


Q ss_pred             hhH-------HHHHHHccccCcEEEEEeeecccCCCc-CCCccchHHHHhhhceeeceecccc--hh-----HHHHHHHH
Q 027106          118 AEM-------QEAAIANMNTYGRVAVCGVISEYTDGK-KRAAPEMLDVIYKRIKFQGFLAADH--LN-----LYQDFIST  182 (228)
Q Consensus       118 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  182 (228)
                      .+.       ....++.++++|.++.++...++.++. .+.+.+...+..+++.+.+...-..  +.     ..+..++.
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~  320 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPY  320 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHH
Confidence            542       678899999999999998654432211 1111111122235565543322111  11     11344567


Q ss_pred             HHHHHHcC
Q 027106          183 TCNHLRSG  190 (228)
Q Consensus       183 ~~~~~~~g  190 (228)
                      +.+++.+|
T Consensus       321 ~~~l~~~g  328 (377)
T 2vhw_A          321 VLELADHG  328 (377)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhCC
Confidence            77777766

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=99.17  E-value=5.4e-10  Score=90.17  Aligned_cols=148  Identities=13%  Similarity=0.068  Sum_probs=92.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ++++|+|+|+ |++|+.+++.++..|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|+|++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4689999997 999999999999999999999999999888873477653333333324444443     4899999998


Q ss_pred             hhH-------HHHHHHccccCcEEEEEeeecccCCCcC-CCccchHHHHhhhceeeceecccc--h-----hHHHHHHHH
Q 027106          118 AEM-------QEAAIANMNTYGRVAVCGVISEYTDGKK-RAAPEMLDVIYKRIKFQGFLAADH--L-----NLYQDFIST  182 (228)
Q Consensus       118 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~  182 (228)
                      .+.       .+..++.++++|.++.++...+.++... +.+.+...+..+++++.+...-..  +     ...++.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            642       6788999999999999987654322100 011111222345666655432111  1     112456778


Q ss_pred             HHHHHHcCC
Q 027106          183 TCNHLRSGA  191 (228)
Q Consensus       183 ~~~~~~~g~  191 (228)
                      +.+++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            888888774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.97  E-value=3.9e-10  Score=91.47  Aligned_cols=126  Identities=16%  Similarity=0.113  Sum_probs=85.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccCh--------------hh----HH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEE--------------TD----LK   98 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--------------~~----~~   98 (228)
                      +|++|+|+|+ |++|++++++++.+|++|+++++++++.+.++ ++|++.+ ++..+.              ++    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999995 99999999999999999999999998888888 7997543 222110              00    11


Q ss_pred             HHHHHHCCCCccEEEcCc---chh---H-HHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           99 AALKRYFPDGIDIYFDNV---GAE---M-QEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      ..+.+... ++|+|++|+   |.+   . ....++.|++++.++.++...+.+.+.   ..+...+..+++++.+...
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~~  322 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHTN  322 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCSS
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeCC
Confidence            12333222 589999999   432   2 377889999999999998655433211   1111223356777777654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.81  E-value=8.5e-09  Score=83.89  Aligned_cols=125  Identities=14%  Similarity=0.109  Sum_probs=83.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-ecc-------------ChhhH----HH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYK-------------EETDL----KA   99 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~~~~----~~   99 (228)
                      +|++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|+..+. +..             .. ++    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            5889999995 99999999999999999999999999988887 88875431 110             11 11    11


Q ss_pred             HHHHHCCCCccEEEcCc---ch---h-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchH-HHHhhhceeeceec
Q 027106          100 ALKRYFPDGIDIYFDNV---GA---E-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEML-DVIYKRIKFQGFLA  169 (228)
Q Consensus       100 ~~~~~~~~~~d~vld~~---g~---~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  169 (228)
                      .+.+... ++|+|++++   |.   . .....++.|+++|.++.++...+.++...   .... .+..+++++.+...
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCSC
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeCC
Confidence            2222221 589999995   21   1 23678899999999999997544332111   1111 13357788887543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.81  E-value=1.5e-08  Score=83.98  Aligned_cols=106  Identities=19%  Similarity=0.167  Sum_probs=82.2

Q ss_pred             hhHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHH
Q 027106           21 FSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKA   99 (228)
Q Consensus        21 ~~~~ta~~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   99 (228)
                      ....++++++.... ...+|++|+|+|. |.+|..+++.++.+|++|+++++++.+.+.++ ++|++ +.+      +.+
T Consensus       255 ~~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~~------l~e  325 (494)
T 3ce6_A          255 GTRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VVT------VEE  325 (494)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECC------HHH
T ss_pred             hhhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Eec------HHH
Confidence            34456666663322 2789999999995 99999999999999999999999999988888 88874 221      222


Q ss_pred             HHHHHCCCCccEEEcCcchh-HHH-HHHHccccCcEEEEEeee
Q 027106          100 ALKRYFPDGIDIYFDNVGAE-MQE-AAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       100 ~~~~~~~~~~d~vld~~g~~-~~~-~~~~~l~~~G~~v~~g~~  140 (228)
                      .+     .+.|+|+++++.. .+. ..++.++++|+++.+|..
T Consensus       326 ~l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          326 AI-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             HG-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             HH-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            22     2589999999874 444 788999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.80  E-value=3e-08  Score=76.40  Aligned_cols=105  Identities=14%  Similarity=0.180  Sum_probs=78.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce---eeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA---FNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.+++|....   .|..+.++....+.+...  |++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999999999998887768876332   344444233333333222  479999


Q ss_pred             EcCcchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|..           .|               +.+++.|+++|++|.++...+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            9988731           22               445678888999999987654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.76  E-value=2.5e-08  Score=79.80  Aligned_cols=106  Identities=19%  Similarity=0.116  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-e--------ccC---hh---hHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-N--------YKE---ET---DLKAALK  102 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~--------~~~---~~---~~~~~~~  102 (228)
                      ++.+|+|+|+ |.+|+.++++++.+|++|+++++++++++.++ ++|++.+. +        +..   .+   .-...+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999996 99999999999999999999999999999998 88875321 0        000   00   0011122


Q ss_pred             HHCCCCccEEEcCcch-----h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106          103 RYFPDGIDIYFDNVGA-----E--MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus       103 ~~~~~~~d~vld~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                      +.. .+.|+||.++..     +  .....++.+++++.++.++...+++++
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e  310 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE  310 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence            211 268999998622     1  347889999999999999988777664

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.70  E-value=1.2e-08  Score=83.27  Aligned_cols=112  Identities=16%  Similarity=0.151  Sum_probs=78.0

Q ss_pred             cchhHHHHHHHHHHhc---CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHhCCCceeeccC
Q 027106           19 LGFSGLTAYAGLFEIG---KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKV-TLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~---~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~-~~~~~~~g~~~~~~~~~   93 (228)
                      ...+..++|.++....   .-.+|++|+|+|+ |++|.++++.++..|+ +|+++++++++. ++++ ++|++ +++.. 
T Consensus       144 ~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~-  219 (404)
T 1gpj_A          144 SEGAVSIGSAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD-  219 (404)
T ss_dssp             TCSCCSHHHHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG-
T ss_pred             cCCCccHHHHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH-
Confidence            3456667777764322   1258999999996 9999999999999999 999999999887 4555 88875 33332 


Q ss_pred             hhhHHHHHHHHCCCCccEEEcCcchh-HH--HHHHHc--c--ccCcEEEEEeeec
Q 027106           94 ETDLKAALKRYFPDGIDIYFDNVGAE-MQ--EAAIAN--M--NTYGRVAVCGVIS  141 (228)
Q Consensus        94 ~~~~~~~~~~~~~~~~d~vld~~g~~-~~--~~~~~~--l--~~~G~~v~~g~~~  141 (228)
                        ++.+.+.     ++|+|++|++.. .+  ...++.  +  +++|.++.++...
T Consensus       220 --~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          220 --ELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             --GHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             --hHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence              3333332     589999999863 21  234454  4  5677777777543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.65  E-value=1.5e-07  Score=71.97  Aligned_cols=105  Identities=11%  Similarity=0.148  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899999999999999999988999999999999988877765665421   2344444233333332211  379999


Q ss_pred             EcCcchh--------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          113 FDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|..                          ..+.+++.++++|+++.+++..+
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9988621                          12334456667899999987654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.62  E-value=2.2e-07  Score=74.99  Aligned_cols=106  Identities=17%  Similarity=0.114  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee-------------ccC--hhhH----H
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN-------------YKE--ETDL----K   98 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~--~~~~----~   98 (228)
                      ++.+|+|+|+ |.+|+.++++++.+|++|+++++++++++.++ ++|...+..             +..  ..++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5789999996 99999999999999999999999999999998 788743211             000  0000    1


Q ss_pred             HHHHHHCCCCccEEEcCcch-----h--HHHHHHHccccCcEEEEEeeecccCCC
Q 027106           99 AALKRYFPDGIDIYFDNVGA-----E--MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                      ..+.+.. .+.|+||.|+..     +  .-...++.|++++.+|.++...+++++
T Consensus       267 ~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e  320 (405)
T 4dio_A          267 ALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIE  320 (405)
T ss_dssp             HHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBT
T ss_pred             hHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCcc
Confidence            1112111 158999998531     1  457889999999999999876666553

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.59  E-value=2.8e-08  Score=69.30  Aligned_cols=106  Identities=11%  Similarity=0.129  Sum_probs=74.0

Q ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHH
Q 027106           24 LTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        24 ~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      .+++.++ +......+++|+|+|+ |.+|.+.++.++..|++|+++++++++.+.+.+++|.. +....   ++.+.+. 
T Consensus         7 sv~~~a~-~~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~~-   79 (144)
T 3oj0_A            7 SIPSIVY-DIVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLIK-   79 (144)
T ss_dssp             SHHHHHH-HHHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHHH-
T ss_pred             cHHHHHH-HHHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHhc-
Confidence            3555555 3333345999999995 99999999988888999999999999887765578743 22332   3333332 


Q ss_pred             HCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeee
Q 027106          104 YFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       104 ~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                          ++|+|++|++..........+++++.++.++.+
T Consensus        80 ----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           80 ----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             ----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             ----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence                489999999864111122678888899888754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.59  E-value=3.9e-07  Score=70.63  Aligned_cols=102  Identities=16%  Similarity=0.120  Sum_probs=74.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ..+++++|++||..| +|+.|+.++.+++..|++|++++.+++..+.+++.   .|.+.+ ..... +..    ++.++.
T Consensus       116 ~la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~g-Da~----~l~d~~  188 (298)
T 3fpf_A          116 ALGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITG-DET----VIDGLE  188 (298)
T ss_dssp             HHTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEES-CGG----GGGGCC
T ss_pred             HHcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEEC-chh----hCCCCC
Confidence            347899999999999 47777888888888899999999999999888732   355332 11111 211    122348


Q ss_pred             ccEEEcCcch----hHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVGA----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ||+|+.....    ..++.+.+.|+|||+++.....
T Consensus       189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          189 FDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             CSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             cCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            9999865442    3889999999999999986643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.53  E-value=6.7e-07  Score=68.79  Aligned_cols=80  Identities=25%  Similarity=0.373  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce---eeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA---FNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+.++++....   .|..+.++....+.+...  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999999888776656765321   344444233333333221  379999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus       106 vnnAg  110 (266)
T 3grp_A          106 VNNAG  110 (266)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.51  E-value=1e-06  Score=67.37  Aligned_cols=80  Identities=15%  Similarity=0.266  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHC--CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+.++....+.+..  .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999988877765665422   234444423333333222  1379999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        87 v~~Ag   91 (259)
T 4e6p_A           87 VNNAA   91 (259)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.48  E-value=9e-07  Score=68.23  Aligned_cols=80  Identities=15%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999998999999999998887776665666422   2355544333333333221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        90 v~nAg   94 (271)
T 3tzq_B           90 DNNAA   94 (271)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99877

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.48  E-value=1.5e-06  Score=66.72  Aligned_cols=105  Identities=11%  Similarity=0.157  Sum_probs=71.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            57899999999999999999988899999999999888777664554211   1344444233333333211  369999


Q ss_pred             EcCcchh--------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          113 FDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|..                          ..+.+++.++.+|+++.+++...
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            9988731                          11223444433799999987543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.43  E-value=2.3e-06  Score=66.30  Aligned_cols=81  Identities=14%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--c----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD--D----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +..  .    ..|..+.++....+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999988889999999999988766554333   220  1    1344444233333333222  


Q ss_pred             CCccEEEcCcch
Q 027106          107 DGIDIYFDNVGA  118 (228)
Q Consensus       107 ~~~d~vld~~g~  118 (228)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            369999998874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.42  E-value=3.1e-06  Score=64.94  Aligned_cols=105  Identities=16%  Similarity=0.211  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .|+++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++..    ..    ..|..+.+++...+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999888999999999998776554423321    11    1344444233333333211  3


Q ss_pred             CccEEEcCcch---hH---------------HHHHHHcccc-----CcEEEEEeeecc
Q 027106          108 GIDIYFDNVGA---EM---------------QEAAIANMNT-----YGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  142 (228)
                      ++|++++++|.   +.               .+.+++.+..     .|+++.+++..+
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            69999999873   11               1233444543     589999887654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.42  E-value=1.9e-06  Score=65.72  Aligned_cols=105  Identities=20%  Similarity=0.191  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.+++...+.+...  +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999888776654665321   1344444233333333211  368999


Q ss_pred             EcCcchh--------------------------HHHHHHHccc-cCcEEEEEeeecc
Q 027106          113 FDNVGAE--------------------------MQEAAIANMN-TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  142 (228)
                      ++++|..                          ..+.+++.++ .+|+++.+++...
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhh
Confidence            9988731                          1123344443 3589999887654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.41  E-value=1.1e-06  Score=66.80  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999999999999999999988877765666422   2344444233333333221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.39  E-value=2.5e-06  Score=66.13  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHH----HHHHhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTL----LKDKLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~----~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||+|++|.++++.+...|++|++++++.++ .+.    ++ +.|...   ..|..+.++....+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999988899999999887543 222    22 334321   1344443233333332211  3


Q ss_pred             CccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|++++++|..                          ..+.+++.++.+|+++.+++..+
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999998731                          12344556666799999987554

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.39  E-value=3.3e-06  Score=64.70  Aligned_cols=82  Identities=21%  Similarity=0.306  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      -+|++|||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+.++....+.+...  ++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999888889999999999988776654333   321   12344444233333333221  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.38  E-value=2e-06  Score=66.04  Aligned_cols=80  Identities=16%  Similarity=0.209  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++++|||+||+|++|..+++.+.. .|++|++++++.++.+.+.+++   +.. .  ..|..+.+++...+.+...  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999988877 8999999999887665544233   321 1  2344443233333332221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999886

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.38  E-value=8.8e-07  Score=67.50  Aligned_cols=105  Identities=20%  Similarity=0.306  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|...   ..|..+.++....+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999998889999999999999887666543   34422   2355554344333333222  479


Q ss_pred             cEEEcCcch--h----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          110 DIYFDNVGA--E----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~--~----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      |++++++|.  .          .|               +.+++.|.  .+|++|.+++..+
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            999998872  1          12               33455553  3699999987664

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.38  E-value=1.8e-06  Score=65.99  Aligned_cols=105  Identities=10%  Similarity=0.137  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++..+.+.+   +.+...    ..|..+.++..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999866  89999999999999999999998876655542   333311    2355544343333333222  


Q ss_pred             CCccEEEcCcch----h-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          107 DGIDIYFDNVGA----E-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 ~~~d~vld~~g~----~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|++++++|.    +           .+               +.....++.+|++|.+++..+
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            479999998762    0           11               123456677899999987654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.37  E-value=1.8e-06  Score=67.24  Aligned_cols=78  Identities=13%  Similarity=0.216  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      +|+++||+||+|++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+.+++...+.+.  +++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            67899999999999999999888899999999999988877764554321   23445442344444433  47999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            887

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.37  E-value=3.1e-06  Score=56.30  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..+..+.    +.+.+.. .++|+||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~-~~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKAL-GGFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHT-TTCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHH-cCCCEEEEC
Confidence            4578999998 999999999999999 79999999999888777 666533 2333332    2233322 269999999


Q ss_pred             cchhHHHHHHH-ccccCcEEEEE
Q 027106          116 VGAEMQEAAIA-NMNTYGRVAVC  137 (228)
Q Consensus       116 ~g~~~~~~~~~-~l~~~G~~v~~  137 (228)
                      ++........+ +...+-+++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCchhhHHHHHHHHHhCCCEEEe
Confidence            98654334443 34445555544

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.36  E-value=1.6e-06  Score=65.72  Aligned_cols=80  Identities=11%  Similarity=0.185  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .|+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++|... ..|..+.++....+.+...  +++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999988899999999999888776664556322 2354544233333333211  36999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.36  E-value=2.8e-06  Score=66.47  Aligned_cols=81  Identities=16%  Similarity=0.200  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc----eeeccCh-hhHHHHHHHHCC--
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD----AFNYKEE-TDLKAALKRYFP--  106 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~----~~~~~~~-~~~~~~~~~~~~--  106 (228)
                      ..+++|||+||++++|.++++.+...|++|++++++.++.+.+.+++   +...    ..|..+. +.....+.....  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35789999999999999999888889999999999988765554343   2111    1344442 233333332211  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        90 g~iD~lv~nAg  100 (311)
T 3o26_A           90 GKLDILVNNAG  100 (311)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999988

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.35  E-value=1.5e-06  Score=65.94  Aligned_cols=104  Identities=13%  Similarity=0.037  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .++|||+||++|+|.+.++.+...|++|+++++++++.+.+.++.+...  ..|..+.++....+.+...  +++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999999999999999999999988877773332211  2344444233333333222  47999999


Q ss_pred             Ccch-----------hHH---------------HHHHHcc-ccCcEEEEEeeecc
Q 027106          115 NVGA-----------EMQ---------------EAAIANM-NTYGRVAVCGVISE  142 (228)
Q Consensus       115 ~~g~-----------~~~---------------~~~~~~l-~~~G~~v~~g~~~~  142 (228)
                      ++|.           +.+               +.+.+.| +.+|++|.+++..+
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            8862           122               2233444 35799999887654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.35  E-value=9.1e-07  Score=67.45  Aligned_cols=106  Identities=21%  Similarity=0.309  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|...   ..|..+.++....+.+...  +++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999999998877655433   34322   2355554344444433322  479


Q ss_pred             cEEEcCcchh-----------HH---------------HHHHHcc---ccCcEEEEEeeeccc
Q 027106          110 DIYFDNVGAE-----------MQ---------------EAAIANM---NTYGRVAVCGVISEY  143 (228)
Q Consensus       110 d~vld~~g~~-----------~~---------------~~~~~~l---~~~G~~v~~g~~~~~  143 (228)
                      |++++++|..           .|               +.+++.|   ..+|++|.+++..+.
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            9999998721           11               3345556   246999999876653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.35  E-value=2e-06  Score=65.79  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57899999999999999999988999999999999998887775666432   2344444233333333221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99876

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.35  E-value=6.1e-06  Score=63.24  Aligned_cols=80  Identities=15%  Similarity=0.219  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||+  |++|.++++.+...|++|+++++++   +..+.+.++.+....  .|..+.++....+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  9999999998888999999999876   333444423343222  355554344444443322  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.35  E-value=1.9e-06  Score=65.36  Aligned_cols=80  Identities=20%  Similarity=0.328  Sum_probs=59.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCCCCccEE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ..++++|||+||+|++|..+++.+...|++|++++++.++.+.+.+++....   ..|..+.+.+.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            4578999999999999999999888899999999999988877765665422   23444432333333322  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.34  E-value=1.3e-06  Score=66.37  Aligned_cols=80  Identities=29%  Similarity=0.449  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+.++....+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999998877766455431   12355554333333333222  379999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.34  E-value=2e-06  Score=66.50  Aligned_cols=105  Identities=14%  Similarity=0.249  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999988999999999999988877765666432   2344544233333333221  369999


Q ss_pred             EcCcch-----------hH---------------HHHHHHcccc--CcEEEEEeeecc
Q 027106          113 FDNVGA-----------EM---------------QEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ++++|.           +.               .+.+++.++.  +|+++.+++..+
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            999872           11               2234455544  589999887654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.34  E-value=1.4e-06  Score=65.75  Aligned_cols=80  Identities=13%  Similarity=0.065  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .++++||+||++++|.++++.+...|++|++++++.++.+.+.++++..   ...|..+.++....+.+...  +++|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            3678999999999999999988889999999999998887776455431   12344444233333333221  379999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        82 vnnAg   86 (235)
T 3l6e_A           82 LHCAG   86 (235)
T ss_dssp             EEECC
T ss_pred             EECCC
Confidence            99887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.33  E-value=2.2e-06  Score=66.46  Aligned_cols=80  Identities=21%  Similarity=0.232  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57899999999999999999988999999999999988877764565422   2344444233333333221  379999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        84 vnnAg   88 (281)
T 3zv4_A           84 IPNAG   88 (281)
T ss_dssp             ECCCC
T ss_pred             EECCC
Confidence            99987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.33  E-value=2.7e-06  Score=65.78  Aligned_cols=80  Identities=25%  Similarity=0.410  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC-Cc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGF-DD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +++++||+||+|++|..+++.+...|++|++++++.++.+.+.++   .|. ..    ..|..+.+++...+.+...  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999998888999999999998776655423   232 11    1344444233333332221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++|+++|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.33  E-value=5.4e-06  Score=63.24  Aligned_cols=79  Identities=15%  Similarity=0.204  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      ++++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++.+.+.+..  .+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999998889999999999987766554233   3321   234444423333333221  14799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999886

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.32  E-value=7e-06  Score=63.21  Aligned_cols=104  Identities=18%  Similarity=0.281  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++ .++.+.+.+   +.|...   ..|..+.++....+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999888899999988644 444444332   234322   2344444334333333222  37


Q ss_pred             ccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|++++++|..                          ..+.+++.++++|+++.++...
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999988720                          1234456677789999987644

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.32  E-value=1.9e-06  Score=66.59  Aligned_cols=105  Identities=18%  Similarity=0.264  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999888899999999999888877765666422   2355544233333333221  379999


Q ss_pred             EcCcchh-----------H---------------HHHHHHcc--ccCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------M---------------QEAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      ++++|..           .               .+.+++.+  +.+|++|.+++..+
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  165 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG  165 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            9988731           1               22334444  45689999987654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.31  E-value=2e-06  Score=65.64  Aligned_cols=80  Identities=19%  Similarity=0.204  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.+++...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999998999999999999887776654554311   1344444234333333221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        84 v~nAg   88 (254)
T 1hdc_A           84 VNNAG   88 (254)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.30  E-value=5.9e-06  Score=63.35  Aligned_cols=105  Identities=10%  Similarity=0.128  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDD----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||+|  |+|.++++.+...|++|++++++++..+.+.   ++++...    ..|..+.+++.+.+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            578999999994  5999999888889999999998765443333   1333211    2344444344443433322  


Q ss_pred             CCccEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          107 DGIDIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 ~~~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|++++++|..                              ..+.+++.++++|+++.++...+
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            3699999987621                              12334556677899999987654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.30  E-value=2.8e-06  Score=64.87  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---D---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++++|.++++.+...|++|+++++++++.+.+.+++..   .   ...|..+.++....+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999889999999999999888776645432   1   12344544233333333221  379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.30  E-value=7e-06  Score=62.25  Aligned_cols=80  Identities=11%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-C--c--eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-D--D--AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~--~--~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +++++||+||+|++|..+++.+...|++|+++++++++.+.+.+++.. .  .  ..|..+.+++...+.+...  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999998888999999999998877665534432 1  1  1344443233333332211  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.29  E-value=3.5e-06  Score=64.99  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCc--eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDD--AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      .|+++||+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+...  ..|..+.++....+.+..  .++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  99999999998889999999998764   3444442344322  235454423333333221  137


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999886

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.29  E-value=2.4e-06  Score=65.91  Aligned_cols=81  Identities=17%  Similarity=0.225  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      ..++++||+||++++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+.++....+.+...  +++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357899999999999999999888899999999999988877765665322   2344544233333333221  37999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus       106 lVnnAg  111 (272)
T 4dyv_A          106 LFNNAG  111 (272)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.29  E-value=3.7e-06  Score=64.35  Aligned_cols=105  Identities=16%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.++++.+...|++|+++ .++.++.+.+.++   .|...   ..|..+.++....+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999888899999988 4454444433322   34321   2344444233333333222  37


Q ss_pred             ccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|++++++|..                           ..+.+++.+.++|++|.+++..+
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            99999988621                           11233455666899999887543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.29  E-value=6.9e-06  Score=63.95  Aligned_cols=104  Identities=17%  Similarity=0.231  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++++|.++++.+...|++|++++++.++ .+.+.+   +.|...   ..|..+.++....+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887543 222221   334322   1345544233333333221  36


Q ss_pred             ccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|++++++|..                           ..+.+++.++++|+++.++...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            99999987621                           1233456677789999988654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.28  E-value=2.9e-06  Score=65.15  Aligned_cols=105  Identities=16%  Similarity=0.287  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.++....+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999998899999999999988776655343   3311   2355544233333333221  369


Q ss_pred             cEEEcCcchh-----------HH---------------HHHHHcc--ccCcEEEEEeeecc
Q 027106          110 DIYFDNVGAE-----------MQ---------------EAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~-----------~~---------------~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      |++++++|..           .+               +.+++.+  +.+|++|.+++..+
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  143 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA  143 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence            9999998721           11               2234444  34689999987654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.28  E-value=1.5e-06  Score=67.41  Aligned_cols=80  Identities=16%  Similarity=0.218  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+.++..+.+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999988889999999999988776654333    211 1  2355554333333333221  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       112 iD~lvnnAG  120 (281)
T 4dry_A          112 LDLLVNNAG  120 (281)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.28  E-value=1.9e-06  Score=64.32  Aligned_cols=89  Identities=8%  Similarity=0.088  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .++++||+||++++|.+.++.+...|++|++++++.+              .|..+.++..+.+.++  +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4789999999999999999988888999999986643              3333332444444443  46899998877


Q ss_pred             hh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          118 AE---------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       118 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ..                           ..+.+++.++++|+++.++....
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            21                           12334456667899999987554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.27  E-value=7.1e-06  Score=63.12  Aligned_cols=105  Identities=17%  Similarity=0.254  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      -.|+++||+||++++|.+.++.+...|++|+++++ +.+..+.+.+   ..|...   ..|..+.++..+.+.+...  +
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999998999999998765 4444443332   334321   2344444344333333222  3


Q ss_pred             CccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          108 GIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ++|++++++|..                          ..+.+++.+.++|+++.++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            699999988731                          1244566777899999998755

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.27  E-value=1e-05  Score=63.05  Aligned_cols=106  Identities=10%  Similarity=0.117  Sum_probs=69.6

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc--eeeccChhhHHHHHHHHC--CC
Q 027106           37 KKGEKVFVSAASGS--VGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDD--AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~--~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~--~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      -.|+++||+||+|+  +|.++++.+...|++|++++++++..+.++   ++.+...  ..|..+.++....+.+..  .+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46889999999855  999999988889999999998865333332   1344322  234454423333333322  13


Q ss_pred             CccEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|++++++|..                              ..+.+++.++++|++|.++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            799999998731                              12334556677899999987554

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.27  E-value=9.1e-06  Score=62.94  Aligned_cols=104  Identities=13%  Similarity=0.158  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCc---eeeccChhhHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------------KEKVTLLKD---KLGFDD---AFNYKEETDLKA   99 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~   99 (228)
                      .|+++||+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.++..+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999988999999999876            554444332   233321   234454423333


Q ss_pred             HHHHHCC--CCccEEEcCcch---------h---------------HHHHHHHccccCcEEEEEeeec
Q 027106          100 ALKRYFP--DGIDIYFDNVGA---------E---------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       100 ~~~~~~~--~~~d~vld~~g~---------~---------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.+...  +++|++++++|.         +               ..+.+++.+..+|+++.++...
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3333221  369999998873         1               1233455666789999988643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.27  E-value=8.5e-06  Score=63.59  Aligned_cols=105  Identities=13%  Similarity=0.119  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDDA--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||+|  ++|.+.++.+...|++|++++++++..+.++   ++.+....  .|..+.++....+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999986  9999999988889999999998865433332   14443222  355554333333333221  37


Q ss_pred             ccEEEcCcchh------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE------------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|++++++|..                              ..+.+++.+.++|++|.++...+
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            99999998731                              11233456667899999987654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.26  E-value=1.1e-05  Score=60.83  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|++|||+||+|++|..+++.+...|++|+++++++++.+.+.+++....+  .|..+.+.+...+.  .-+++|+++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            578999999999999999999988999999999998877766534432222  34444322332222  11369999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        84 Ag   85 (244)
T 3d3w_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.26  E-value=5.2e-06  Score=63.15  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----C-C-Cc--eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----G-F-DD--AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g-~-~~--~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .++++||+||++++|.++++.+...|++|++++++.++.+.+.+++     + . ..  ..|..+.++....+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999888889999999999988776655333     2 1 11  1355544233333333221  


Q ss_pred             CCccEEEcCcch
Q 027106          107 DGIDIYFDNVGA  118 (228)
Q Consensus       107 ~~~d~vld~~g~  118 (228)
                      +++|++++++|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.26  E-value=5.8e-07  Score=67.88  Aligned_cols=102  Identities=15%  Similarity=0.242  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++.+... .-.. ....|..+.++..+.+.++  +++|++++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLVNNA   86 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEAL--PRLDVLVNNA   86 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhc--CCCCEEEECC
Confidence            6999999999999999999999999999999998876654322 1111 1124555553444444332  4799999998


Q ss_pred             ch--h-------HH---------------HHHHHccc-cCcEEEEEeeecc
Q 027106          117 GA--E-------MQ---------------EAAIANMN-TYGRVAVCGVISE  142 (228)
Q Consensus       117 g~--~-------~~---------------~~~~~~l~-~~G~~v~~g~~~~  142 (228)
                      |.  +       .|               +.+++.|+ .+|++|.+++..+
T Consensus        87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            72  1       12               33455564 4799999987654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.26  E-value=4.7e-06  Score=63.73  Aligned_cols=105  Identities=21%  Similarity=0.271  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHHCCC-C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRYFPD-G  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~~~~-~  108 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+.+++...+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999988889999999999988766554333     311 1  13555443444444433222 4


Q ss_pred             ccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +|++++++|..           .+               +.+++.+.  ..|+++.+++...
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL  147 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            99999998721           11               33444443  3489999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.26  E-value=4.3e-06  Score=64.26  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      -.|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++    |...   ..|..+.+++...+.+...  +
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999998889999999999988766544233    5422   2344544233333332211  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        99 ~iD~lvnnAg  108 (267)
T 1vl8_A           99 KLDTVVNAAG  108 (267)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.26  E-value=5.8e-06  Score=63.27  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDDA--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+....  .|..+.++....+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  89999999888888999999998764   33444423443222  344444233333332221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        87 iD~lv~~Ag   95 (261)
T 2wyu_A           87 LDYLVHAIA   95 (261)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.25  E-value=5.8e-06  Score=63.29  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++    +...   ..|..+.+++...+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988889999999999987766544233    4321   1344444233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.25  E-value=3.4e-06  Score=64.61  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc----eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD----AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~----~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   +...    ..|..+.++....+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999998899999999999988776654333   2111    2344444233333332221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.25  E-value=4.7e-06  Score=64.00  Aligned_cols=80  Identities=16%  Similarity=0.194  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-----GFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .|+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++     +...   ..|..+.+++...+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999988889999999999988766544232     4321   1355544234333333221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999886

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.25  E-value=4.9e-06  Score=63.13  Aligned_cols=80  Identities=25%  Similarity=0.383  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++....+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988889999999999988776554333   4321   2344444233333332221  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.24  E-value=1.2e-05  Score=62.63  Aligned_cols=93  Identities=19%  Similarity=0.267  Sum_probs=71.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      --+|++|+|.|+ |.+|..+++.++..|++|++++++.++.+.++ ++|... ++..   ++.+.+     ...|+|+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~-~~~~---~l~~~l-----~~aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGMEP-FHIS---KAAQEL-----RDVDVCINT  220 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSEE-EEGG---GHHHHT-----TTCSEEEEC
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCee-cChh---hHHHHh-----cCCCEEEEC
Confidence            347899999995 99999999999999999999999988877777 777642 2222   332222     258999999


Q ss_pred             cchh-HHHHHHHccccCcEEEEEee
Q 027106          116 VGAE-MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       116 ~g~~-~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++.. .-...++.+++++.++.++.
T Consensus       221 ~p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CSSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             CChHHhCHHHHHhcCCCCEEEEecC
Confidence            8753 22456788999999999885

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.24  E-value=7.2e-06  Score=63.39  Aligned_cols=78  Identities=23%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC-CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP-DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~-~~~d~vl  113 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+.++....+.+... +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            57899999999999999999888899999999999998887775676432   2355554344544554422 3789999


Q ss_pred             cC
Q 027106          114 DN  115 (228)
Q Consensus       114 d~  115 (228)
                      ++
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            87

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.24  E-value=3.4e-06  Score=64.28  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHH---HHHHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLK---AALKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~---~~~~~~~~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |..   ...|..+.++..   +.+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            5789999999999999999998889999999999888766655333   331   123444442333   333333  57


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        84 id~lv~nAg   92 (252)
T 3h7a_A           84 LEVTIFNVG   92 (252)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEECCC
Confidence            999999988

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.23  E-value=5.7e-06  Score=62.92  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+.++....+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998899999999999988776665343   321   12344444233333332221  369


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |++++++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999998863

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.23  E-value=5.6e-06  Score=67.11  Aligned_cols=102  Identities=20%  Similarity=0.156  Sum_probs=75.4

Q ss_pred             HHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHH
Q 027106           25 TAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        25 ta~~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      ..+.++.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|... .      ++.+.+  
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~v-~------~Leeal--  273 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFRL-V------KLNEVI--  273 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHT--
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCEe-c------cHHHHH--
Confidence            3444453333 3468999999995 99999999999999999999999888766666 666421 1      222222  


Q ss_pred             HCCCCccEEEcCcchh-HH-HHHHHccccCcEEEEEeee
Q 027106          104 YFPDGIDIYFDNVGAE-MQ-EAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       104 ~~~~~~d~vld~~g~~-~~-~~~~~~l~~~G~~v~~g~~  140 (228)
                         ...|+++.|.+.. .+ ...++.|++++.++.+|..
T Consensus       274 ---~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          274 ---RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             ---hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence               2479999987753 44 4788999999999999854

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.23  E-value=5.3e-06  Score=64.91  Aligned_cols=81  Identities=20%  Similarity=0.310  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      -.|++|||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +...   ..|..+.++..+.+.+...  ++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            36789999999999999999998899999999999988876655333   3221   2355544233333333221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       109 id~lvnnAg  117 (301)
T 3tjr_A          109 VDVVFSNAG  117 (301)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.22  E-value=4.7e-06  Score=63.33  Aligned_cols=80  Identities=14%  Similarity=0.138  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHC-CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYF-PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~-~~~~d~v  112 (228)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.++++...    ..|..+.+++...+.+.. .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            57899999999999999999888899999999999887766654554321    134444423333332211 1469999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.22  E-value=3.9e-06  Score=64.51  Aligned_cols=105  Identities=15%  Similarity=0.183  Sum_probs=67.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ..|+++||+||++++|.++++.+...|++|++++ ++.+..+.+.+   ..|...   ..|..+.++....+.+...  +
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3688999999999999999988888899998874 44444444332   234321   2355544233333333221  3


Q ss_pred             CccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          108 GIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ++|++++++|..                          ..+.+++.++++|+++.++...
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            799999998721                          1234556677789999988643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.22  E-value=1.9e-06  Score=65.81  Aligned_cols=80  Identities=21%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999988999999999988877665553555321   1344444233333333221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.22  E-value=4.5e-06  Score=63.88  Aligned_cols=80  Identities=19%  Similarity=0.196  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.++++..   ...|..+.+++.+.+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999988889999999999988776655344321   12344444233333332221  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.22  E-value=5.7e-06  Score=63.70  Aligned_cols=80  Identities=19%  Similarity=0.184  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++....  ..|..+.+++...+.+...  +++|+++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999988899999999999888776653443211  2344444233333332211  3699999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9886

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.22  E-value=5.8e-06  Score=63.85  Aligned_cols=80  Identities=18%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      +++++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++...+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999998889999999999988765544233   4321   234444423333333221  1369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.22  E-value=7.9e-06  Score=62.95  Aligned_cols=80  Identities=16%  Similarity=0.271  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHH---HHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAA---LKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~---~~~~~~~~  108 (228)
                      .|+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++....   +.+..+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999988766544232   4321   2344444233332   33333257


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       100 id~lv~nAg  108 (273)
T 1ae1_A          100 LNILVNNAG  108 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.21  E-value=5.4e-06  Score=64.13  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .+|+++||+||++++|.++++.+...|++|++++++.++.+.+.+++   |...   ..|..+.++....+.+...  ++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999888889999999999988776655343   3221   2355544333333333221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       102 id~lv~nAg  110 (279)
T 3sju_A          102 IGILVNSAG  110 (279)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999887

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.21  E-value=3.9e-06  Score=65.44  Aligned_cols=80  Identities=16%  Similarity=0.262  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cc----eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---DD----AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~----~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++..   ..    ..|..+.++..+.+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999889999999999998877665544432   11    2345544233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.21  E-value=7.1e-06  Score=62.32  Aligned_cols=78  Identities=23%  Similarity=0.337  Sum_probs=57.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.+++...+.+...  +++|++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            378999999999999999888899999999999888777664665321   2355554344444544433  37999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        81 nAg   83 (248)
T 3asu_A           81 NAG   83 (248)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            886

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.21  E-value=5.4e-06  Score=63.05  Aligned_cols=100  Identities=13%  Similarity=0.169  Sum_probs=66.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      ..+++|||+||+|++|.++++.+...|++|++++++.++.+.      ....++..+.++....+.+...  +++|++++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            447899999999999999999988999999999987654221      1112233333244444444322  37999999


Q ss_pred             Ccch--------h-------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          115 NVGA--------E-------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       115 ~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|.        +                   ..+.+++.++++|+++.++...+
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            9872        0                   12334556667899999987554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.21  E-value=1.1e-05  Score=59.95  Aligned_cols=97  Identities=7%  Similarity=0.032  Sum_probs=64.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHHhCCC-ce--eeccChhhHHHHHHHHCCCCccEEEc
Q 027106           40 EKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGSKE-KVTLLKDKLGFD-DA--FNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~-~~g~~V~~~~~~~~-~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      ++|||+||+|++|..+++.+. ..|++|++++++++ +.+.+. ..+.. .+  .|..+.+++...+     .++|++++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAV-----TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHH-----TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHH-----cCCCEEEE
Confidence            469999999999999998877 89999999999988 665553 22321 11  2444332222222     25899999


Q ss_pred             Ccchh--HHHHHHHcccc--CcEEEEEeeecc
Q 027106          115 NVGAE--MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       115 ~~g~~--~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ++|..  ....+++.++.  .+++|.++....
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            99852  14455555544  368998887553

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.20  E-value=6.4e-06  Score=63.87  Aligned_cols=80  Identities=15%  Similarity=0.216  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +++++||+||++++|.++++.+...|++|++++++.++.+.+.+++.   ...   ..|..+.++....+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999888899999999999888776654542   211   2344444233333333221  379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       107 D~lVnnAg  114 (283)
T 3v8b_A          107 DIVVANAG  114 (283)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.20  E-value=4.9e-06  Score=64.40  Aligned_cols=80  Identities=24%  Similarity=0.291  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG---FDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+.+++.   ...   ..|..+.++....+.+...  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999888899999999999888776664542   211   1344444233333332221  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.20  E-value=9.1e-06  Score=62.10  Aligned_cols=80  Identities=15%  Similarity=0.270  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHH---HHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAAL---KRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~---~~~~~~~  108 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++....+   .+...++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999988766544233   3211   13444432333333   3333257


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.20  E-value=7e-06  Score=62.47  Aligned_cols=81  Identities=16%  Similarity=0.227  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----C-CCc--eeec--cChhhHHHHHHHHC--
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----G-FDD--AFNY--KEETDLKAALKRYF--  105 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g-~~~--~~~~--~~~~~~~~~~~~~~--  105 (228)
                      -.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++    + ...  ..|.  .+.++....+.+..  
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            36789999999999999999988889999999999988776554332    2 111  2233  33323333333221  


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      .+++|++++++|
T Consensus        90 ~g~id~lv~nAg  101 (252)
T 3f1l_A           90 YPRLDGVLHNAG  101 (252)
T ss_dssp             CSCCSEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence            237999999887

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.20  E-value=2.5e-06  Score=64.56  Aligned_cols=103  Identities=14%  Similarity=0.055  Sum_probs=74.0

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHH
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      ..+ ...++.+|++||..|+ | .|..+..+++. +.+|++++.+++..+.+++.   .+...-+..... ++.    +.
T Consensus        82 ~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~  152 (248)
T 2yvl_A           82 YIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFK----DA  152 (248)
T ss_dssp             HHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTT----TS
T ss_pred             HHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chh----hc
Confidence            444 5678899999999994 5 69999999988 88999999999998888732   243111111111 211    11


Q ss_pred             C-C-CCccEEEcCcch--hHHHHHHHccccCcEEEEEee
Q 027106          105 F-P-DGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       105 ~-~-~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . . +++|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       153 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          153 EVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             ccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2 2 379999987764  588999999999999998753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.20  E-value=4.8e-06  Score=64.01  Aligned_cols=80  Identities=18%  Similarity=0.303  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCC-c--eeeccChhhHHHHHHH---HCC--
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTLLKDKLGFD-D--AFNYKEETDLKAALKR---YFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~---~~~--  106 (228)
                      +|+++||+||  ++++|.+.++.+...|++|+++++++++ .+.+.++++.. .  ..|..+.++....+.+   ..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999998  8999999999888899999999987755 35444345432 1  2355544233333332   222  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999886

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.20  E-value=4.7e-06  Score=64.39  Aligned_cols=80  Identities=21%  Similarity=0.322  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |.. .  ..|..+.++..+.+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999887766554333   322 1  2355544334333333221  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       111 D~lvnnAg  118 (276)
T 3r1i_A          111 DIAVCNAG  118 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.20  E-value=2e-05  Score=61.01  Aligned_cols=80  Identities=14%  Similarity=0.185  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCce--eeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDDA--FNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      .|+++||+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+....  .|..+.+++...+.+..  .++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  89999999988889999999998764   33334323443222  34444423333333221  147


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.20  E-value=5.8e-06  Score=63.28  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++... .  ..|..+.+++...+.+...  +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999998889999999999988777665344321 1  2344444233333332211  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.20  E-value=7.9e-06  Score=61.88  Aligned_cols=80  Identities=24%  Similarity=0.357  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .++++||+||++++|...++.+...|++|+++++++++.+.+.+++   +...   ..|..+.++....+.+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999888889999999999988776654333   4321   234444434444343332  2379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        84 d~li~~Ag   91 (247)
T 3lyl_A           84 DILVNNAG   91 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.20  E-value=1.5e-05  Score=62.06  Aligned_cols=105  Identities=16%  Similarity=0.167  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.  +..+.+.+   +.|...   ..|..+.++....+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999889999999988762  23333221   344322   1344444233333332221  3


Q ss_pred             CccEEEcCcchh---------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE---------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++|++++++|..                           ..+.+++.+.++|++|.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            799999988731                           11334556777899999987654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.19  E-value=4.6e-06  Score=65.83  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C---ceeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF--D---DAFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~---~~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +.  .   ...|..+.+++...+.+..  .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999988889999999999988776654332   32  1   1235554433433333322  14


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.19  E-value=3.7e-06  Score=65.02  Aligned_cols=105  Identities=17%  Similarity=0.231  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+.+++...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999988999999999999887777664555321   2344444233333333221  369999


Q ss_pred             EcCcchh-----------H---------------HHHHHHccc--cCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------M---------------QEAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      ++++|..           .               .+.+++.++  ..|++|.+++..+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~  141 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG  141 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            9998721           1               333444443  3589999887654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.19  E-value=9e-06  Score=64.88  Aligned_cols=79  Identities=24%  Similarity=0.388  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCCc---eeeccChhhHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-----------VTLLKDKLGFDD---AFNYKEETDLKAALKR  103 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~~~~~  103 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++           .+.++ ..|...   ..|..+.+++...+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999888899999999987653           22333 444321   2355554344333333


Q ss_pred             HCC--CCccEEEcCcc
Q 027106          104 YFP--DGIDIYFDNVG  117 (228)
Q Consensus       104 ~~~--~~~d~vld~~g  117 (228)
                      ...  +++|++++++|
T Consensus       123 ~~~~~g~iDilVnnAG  138 (346)
T 3kvo_A          123 AIKKFGGIDILVNNAS  138 (346)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  37999999988

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.19  E-value=4.6e-06  Score=63.80  Aligned_cols=80  Identities=18%  Similarity=0.142  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +++++||+||+|++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999988899999999998777666554665421   1344444233333332211  369999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99876

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.19  E-value=8.8e-06  Score=62.41  Aligned_cols=107  Identities=10%  Similarity=0.130  Sum_probs=69.5

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHhCCCc--eeeccChhhHHHHHHHHC--C
Q 027106           36 PKKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEKVT---LLKDKLGFDD--AFNYKEETDLKAALKRYF--P  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~---~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~  106 (228)
                      ..++++|||+||+  +++|.++++.+...|++|++++++....+   .+.++.+...  ..|..+.++....+.+..  .
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999998  99999999988889999999987754333   3322444322  234444423333333322  1


Q ss_pred             CCccEEEcCcchh-------------------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          107 DGIDIYFDNVGAE-------------------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       107 ~~~d~vld~~g~~-------------------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|++++++|..                               ..+.+++.++++|+++.++....
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  157 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  157 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc
Confidence            4799999988621                               11233445666899999887554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.19  E-value=7.6e-06  Score=62.73  Aligned_cols=81  Identities=12%  Similarity=0.192  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      -.|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.++..+.+.+..  .++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999988889999999999988776655333   3221   235555433333333322  137


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        89 id~lv~nAg   97 (264)
T 3ucx_A           89 VDVVINNAF   97 (264)
T ss_dssp             CSEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999885

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.18  E-value=7.1e-06  Score=63.71  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh----CCCc---eeeccC----hhhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTLLKDKL----GFDD---AFNYKE----ETDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~~----g~~~---~~~~~~----~~~~~~~~~~~~  105 (228)
                      .|+++||+||++++|.++++.+...|++|++++++. ++.+.+.+++    |...   ..|..+    .+++...+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            578999999999999999998888999999999887 6655443233    3211   134444    323333333221


Q ss_pred             C--CCccEEEcCcc
Q 027106          106 P--DGIDIYFDNVG  117 (228)
Q Consensus       106 ~--~~~d~vld~~g  117 (228)
                      .  +++|++++++|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999887

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.18  E-value=4.2e-06  Score=63.89  Aligned_cols=105  Identities=17%  Similarity=0.214  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   +...   ..|..+.++....+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888889999999999988776654332   3321   2344444233333333221  369


Q ss_pred             cEEEcCcch----------hH---------------HHHHHHccc--cCcEEEEEeeecc
Q 027106          110 DIYFDNVGA----------EM---------------QEAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      |++++++|.          +.               .+.+++.+.  .+|+++.+++..+
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  150 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG  150 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Confidence            999998873          11               122334443  3689999987654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.18  E-value=8.4e-06  Score=62.93  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-c--eeeccChhhHHHHHHHHC--CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--D-D--AFNYKEETDLKAALKRYF--PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~~~~~~--~~~~d  110 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++..  . .  ..|..+.+++...+.+..  .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999999999888999999999998877655434421  1 1  134444423333333221  24799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.17  E-value=1.1e-05  Score=62.37  Aligned_cols=82  Identities=16%  Similarity=0.160  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ..|+++||+||++++|.++++.+...|++|+++++ ++++.+.+.++   .|...   ..|..+.++....+.+...  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999998899999999984 66655444323   33321   2344444344433333221  3


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|++++++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.17  E-value=8.2e-06  Score=62.45  Aligned_cols=80  Identities=18%  Similarity=0.282  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+.++....+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999988766554333   3221   1344444233333332221  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999876

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.17  E-value=7.3e-06  Score=63.29  Aligned_cols=81  Identities=17%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      -.|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++    .|...   ..|..+.++....+.+...  +
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999888999999999998766554323    24321   1355544233333333221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.16  E-value=3.6e-05  Score=55.50  Aligned_cols=93  Identities=13%  Similarity=0.136  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCC-CCccEEEcC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFP-DGIDIYFDN  115 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~d~vld~  115 (228)
                      +++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+. +   .+.+.++ .++|+|+.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~-~---~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP-D---FWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH-H---HHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH-H---HHHhccCCCCCCEEEEe
Confidence            678999995 99999999999998 999999999999998888 77875433 33332 2   2333312 379999999


Q ss_pred             cchh-HHH---HHHHccccCcEEEEE
Q 027106          116 VGAE-MQE---AAIANMNTYGRVAVC  137 (228)
Q Consensus       116 ~g~~-~~~---~~~~~l~~~G~~v~~  137 (228)
                      ++.. ...   ...+.+.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            8863 222   234444555676664

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.16  E-value=6.9e-06  Score=63.23  Aligned_cols=81  Identities=17%  Similarity=0.323  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      -.|+++||+||++++|.++++.+...|++|+++++++++.+.+.++   .|...   ..|..+.++....+.+...  ++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999998888999999999998876655423   33321   2355544233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       106 iD~lvnnAg  114 (270)
T 3ftp_A          106 LNVLVNNAG  114 (270)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.16  E-value=6.1e-06  Score=63.29  Aligned_cols=105  Identities=11%  Similarity=0.096  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++    .+...    ..|..+.++....+.+...  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999998888999999999998877655433    23221    1345544233333333221  3


Q ss_pred             CccEEEcCcchh-----------H---------------HHHHHHcccc--CcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE-----------M---------------QEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ++|++++++|..           .               .+.+++.+..  +|++|.+++..+
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  149 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA  149 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc
Confidence            799999998731           1               2233444543  689999887654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.16  E-value=2e-05  Score=59.14  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +++++||+||++++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|..+.++....+.+...  ++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            367999999999999999999999999999999998877655433    23322   1344444233322222211  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        81 id~li~~Ag   89 (235)
T 3l77_A           81 VDVVVANAG   89 (235)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999887

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.16  E-value=1.9e-06  Score=65.17  Aligned_cols=102  Identities=11%  Similarity=0.116  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHH---HHHHHCC-CCccEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKA---ALKRYFP-DGIDIY  112 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~-~~~d~v  112 (228)
                      .+++++||+||+|++|.++++.+...|++|+++++++++.+.   .. .....|..+.++...   .+.+..+ +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            467899999999999999999988899999999987654210   00 001123333222222   2222222 479999


Q ss_pred             EcCcch--------h-------------------HHHHHHHccccCcEEEEEeeecc
Q 027106          113 FDNVGA--------E-------------------MQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++++|.        +                   ..+.+++.++++|+++.+++...
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            998872        1                   11233455556799999887554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.16  E-value=3.4e-06  Score=64.57  Aligned_cols=79  Identities=18%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vl  113 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++. +.++ +.+... ..|..+.++....+.+..  .+++|+++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            578999999999999999998888999999999877654 3333 556432 235555423333333322  13799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.16  E-value=5.7e-06  Score=63.74  Aligned_cols=80  Identities=21%  Similarity=0.367  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.++..+.+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999998899999999999988776554333   3321   134444423333333321  2379


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.15  E-value=7.8e-06  Score=61.95  Aligned_cols=80  Identities=24%  Similarity=0.354  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++ ++++.+.+.+++   +...   ..|..+.+++...+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999998889999999998 776665443232   4321   2344444233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (246)
T 2uvd_A           83 VDILVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.15  E-value=3.4e-06  Score=64.81  Aligned_cols=80  Identities=19%  Similarity=0.318  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|..+.++....+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998877655433    34321   2344444243333333221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999887

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.15  E-value=1e-05  Score=66.80  Aligned_cols=100  Identities=17%  Similarity=0.194  Sum_probs=73.4

Q ss_pred             HHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHC
Q 027106           27 YAGLFEIGKP-KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        27 ~~~l~~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      +.++.+..+. -.|++|+|+|+ |++|.+.++.++..|++|+++++++.+.+.+. ..|.+ +.+..+.           
T Consensus       252 ~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~lee~-----------  317 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLEDV-----------  317 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGGGT-----------
T ss_pred             HHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHHHH-----------
Confidence            3334333333 47999999996 79999999999999999999999988877777 66642 2221110           


Q ss_pred             CCCccEEEcCcch-h-HHHHHHHccccCcEEEEEeee
Q 027106          106 PDGIDIYFDNVGA-E-MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       106 ~~~~d~vld~~g~-~-~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ...+|+++++.|. . .-...++.+++++.++..|..
T Consensus       318 ~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          318 VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            1258999999886 3 334578999999999998853

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.15  E-value=1e-05  Score=62.02  Aligned_cols=103  Identities=18%  Similarity=0.224  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK---EKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.   ++.+.+.+++   |...   ..|..+.++....+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999888999999987543   3444333233   3211   2355554233333333221  


Q ss_pred             CCccEEEcCcch-----------hH---------------HHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDNVGA-----------EM---------------QEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~~g~-----------~~---------------~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +++|++++++|.           +.               .+.+++.++++|+++.++..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            479999999872           11               13344566678999998764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.15  E-value=9.4e-06  Score=62.61  Aligned_cols=81  Identities=15%  Similarity=0.258  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Cc----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF--DD----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   +.  ..    ..|..+.+++...+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999988889999999999988776655344   21  11    1344444233333332221  


Q ss_pred             CCccEEEcCcch
Q 027106          107 DGIDIYFDNVGA  118 (228)
Q Consensus       107 ~~~d~vld~~g~  118 (228)
                      +++|++++++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.15  E-value=8.8e-06  Score=61.06  Aligned_cols=80  Identities=19%  Similarity=0.178  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      .+++|||+||+|++|..+++.+...|++|++++++.++.+.+.++++...  ..|..+.+++...+.+...  +++|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999888899999999999888776653453212  1344444233333332211  3699999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.14  E-value=1.4e-06  Score=65.74  Aligned_cols=101  Identities=16%  Similarity=0.119  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHH---HHHHHHCC-CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLK---AALKRYFP-DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~-~~~d~vl  113 (228)
                      +++++||+||+|++|.++++.+...|++|+++++++++.+.   .. .....|..+.++..   +.+.+..+ +++|+++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---EE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---cc-EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            36789999999999999999998899999999987654210   00 00012333221222   22222222 4799999


Q ss_pred             cCcch--------h----H---------------HHHHHHccccCcEEEEEeeecc
Q 027106          114 DNVGA--------E----M---------------QEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       114 d~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +++|.        +    .               .+.+++.++++|+++.+++..+
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            99872        1    1               2334556656789999887554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.14  E-value=1.5e-05  Score=60.85  Aligned_cols=80  Identities=14%  Similarity=0.205  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC---CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF---PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~---~~~  108 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |.. .  ..|..+.++....+.+..   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999998889999999999988766554333   321 1  134444423433333321   347


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999984

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.14  E-value=5.8e-06  Score=63.92  Aligned_cols=80  Identities=16%  Similarity=0.284  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-c--eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF---D-D--AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~-~--~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+.++....+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999988889999999999988776554333   22   1 1  1355544233333333221  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999886

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.14  E-value=1e-05  Score=61.26  Aligned_cols=77  Identities=18%  Similarity=0.037  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHHh-CCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-A--GSKEKVTLLKDKL-GFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~--~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      |+++||+||+|++|.++++.+...|++|+++ .  +++++.+.+.+++ +. .+.+..+.+.+.+.+.+.. +++|++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4689999999999999999988899999999 6  8888877666455 32 2333333324444444432 37999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.13  E-value=9.2e-06  Score=61.69  Aligned_cols=79  Identities=15%  Similarity=0.228  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHH-HHHHhCCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-EKVTL-LKDKLGFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~-~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++ ++.+. ++ +.|...   ..|..+.+++...+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999998888999999999887 65543 33 555321   2344444233333332211  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.13  E-value=1.1e-05  Score=62.02  Aligned_cols=80  Identities=19%  Similarity=0.213  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .++++||+||+|++|..+++.+...|++|+++++++++.+.+.+++   |...   ..|..+.+++...+.+..  .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999998889999999999987766544232   4321   134444423333333221  1369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.13  E-value=3.2e-05  Score=58.25  Aligned_cols=78  Identities=17%  Similarity=0.230  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCc-eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-GFDD-AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+.+.++. +... ..|..+.+++.+.+.  ..+++|+++++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            5789999999999999999998889999999999988776665333 2221 234444323333332  11369999999


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.13  E-value=9.1e-06  Score=62.09  Aligned_cols=80  Identities=16%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh----CCCc---eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-VTLLKDKL----GFDD---AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++++ .+.+.+++    |...   ..|..+.+++...+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999988899999999988766 55443233    4321   1344444233333333221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.12  E-value=5.6e-06  Score=62.65  Aligned_cols=100  Identities=23%  Similarity=0.308  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCc---eeeccChhhHHHHHHHHC-CCCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKDKLGFDD---AFNYKEETDLKAALKRYF-PDGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~-~~~~d~  111 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.  +..+.++ +.|...   ..|..+. +   .+++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence            689999999999999999999999999999999764  3445555 666532   2243333 1   122222 248999


Q ss_pred             EEcCcchh-----------HH---------------HHHHHcc-c--cCcEEEEEeeecc
Q 027106          112 YFDNVGAE-----------MQ---------------EAAIANM-N--TYGRVAVCGVISE  142 (228)
Q Consensus       112 vld~~g~~-----------~~---------------~~~~~~l-~--~~G~~v~~g~~~~  142 (228)
                      +++++|..           .|               +.+++.| +  .+|++|.+++..+
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            99998721           22               2334444 2  3699999987654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.12  E-value=1.2e-05  Score=61.18  Aligned_cols=80  Identities=15%  Similarity=0.197  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+++|||+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++.+.+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999887665443232   4321   2344444233333332211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.12  E-value=1.4e-05  Score=60.89  Aligned_cols=79  Identities=18%  Similarity=0.296  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .|+++||+||+|++|..+++.+...|++|+++++++++  .+.+. +.|...   ..|..+.+++...+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999888899999999876541  12222 234321   1344444233333332221  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.12  E-value=1.2e-05  Score=60.22  Aligned_cols=77  Identities=12%  Similarity=0.139  Sum_probs=55.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +++||+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++....+.+. ...+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-DSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSC-SSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHH-hhcCCEEEEeC
Confidence            369999999999999999988999999999999998887774554321   23555442333333332 23459999988


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.12  E-value=1.1e-05  Score=61.69  Aligned_cols=80  Identities=20%  Similarity=0.261  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+.++....+.+...  +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999887765543232   3321   1344443233333332211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.12  E-value=1.7e-05  Score=59.82  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      |++|||+||+|++|..+++.+...|++|+++ .+++++.+.+.++   .+...   ..|..+.+++...+.+..  .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998999999984 7777766544322   24311   134444423333333321  1369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.12  E-value=1.5e-05  Score=61.29  Aligned_cols=80  Identities=16%  Similarity=0.324  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c----eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D----AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~----~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      .+++|||+||+|++|..+++.+...|++|++++++.++.+.+.++++.. .    ..|..+.+++...+.+...  +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999988889999999999887766554355431 1    1344444233333332211  3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9998876

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.12  E-value=3.2e-06  Score=64.95  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+. .-... ...|..+.+++...+.+...  +++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5789999999999999999998889999999999887755432 11111 12344444233333333221  37999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        94 nAg   96 (266)
T 3p19_A           94 NAG   96 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.12  E-value=1.6e-05  Score=60.12  Aligned_cols=81  Identities=20%  Similarity=0.300  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++++|||+||+|++|..+++.+...|++|+++ .+++++.+.+.+   ..+...   ..|..+.+++...+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999988899999998 555544443321   234321   1344444233333332211  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.12  E-value=7e-06  Score=64.11  Aligned_cols=80  Identities=18%  Similarity=0.326  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-c--eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF---D-D--AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~-~--~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   |.   . .  ..|..+.+++...+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999988889999999999988766554232   22   1 1  1344444233333332211  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999887

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.11  E-value=1.4e-05  Score=62.43  Aligned_cols=94  Identities=18%  Similarity=0.291  Sum_probs=71.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      --.|++|+|.|+ |.+|..+++.++..|++|++++++.++.+.+. ++|.. .++..   ++.+.+     .+.|+|+.+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELKEHV-----KDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHHHHS-----TTCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHHHHh-----hCCCEEEEC
Confidence            347899999995 99999999999999999999999988877776 67753 22222   332222     258999999


Q ss_pred             cchhH-HHHHHHccccCcEEEEEeee
Q 027106          116 VGAEM-QEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       116 ~g~~~-~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ++... -...++.+++++.++.++..
T Consensus       223 ~p~~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CSSCCBCHHHHTTSCTTCEEEECSST
T ss_pred             CChhhhCHHHHHhCCCCCEEEEEeCC
Confidence            88642 24567889999999998853

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.11  E-value=7.6e-06  Score=62.41  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++ +.+.++++. ..  .|..+.+++...+.+...  +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999888899999999988776 444335542 22  344443233333333211  3699999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.11  E-value=8.8e-06  Score=62.80  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhH---HHHHHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDL---KAALKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~---~~~~~~~~~~~  108 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+.   .+.+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            6789999999999999999998889999999998877655544232   3321   1244433233   3333333  57


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.11  E-value=9.9e-06  Score=62.40  Aligned_cols=80  Identities=14%  Similarity=0.116  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCCc---eeeccCh----hhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL----GFDD---AFNYKEE----TDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~---~~~~~~~----~~~~~~~~~~~  105 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++ ++++.+.+.+++    |...   ..|..+.    +.+...+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            5789999999999999999988889999999998 877766554333    4321   1244333    24333333221


Q ss_pred             C--CCccEEEcCcc
Q 027106          106 P--DGIDIYFDNVG  117 (228)
Q Consensus       106 ~--~~~d~vld~~g  117 (228)
                      .  +++|++++++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=98.11  E-value=6.6e-05  Score=55.93  Aligned_cols=102  Identities=11%  Similarity=0.094  Sum_probs=70.6

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCC-ceeeccChhhHHHHHHHHCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFD-DAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~-~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ..+.+++.+||-.|  .+.|..++.+++.+  +.+|++++.+++..+.+++.   .|.. .-+..... +..+.+....+
T Consensus        51 ~~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~  127 (221)
T 3dr5_A           51 TTNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAN  127 (221)
T ss_dssp             HSCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCT
T ss_pred             hhCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcC
Confidence            34445566999888  67899999999986  57999999999988887643   3444 22322222 44444433324


Q ss_pred             CCccEEEcCcch----hHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVGA----EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+||-....    ..+..+.+.|+|||.++.-
T Consensus       128 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          128 DSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             TCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             CCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            589998854432    3788899999999999883

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.10  E-value=1.3e-05  Score=62.21  Aligned_cols=80  Identities=19%  Similarity=0.238  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh-----CCCc---eeeccChhhHHHHHHHHCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC---YVVGSAGSKEKVTLLKDKL-----GFDD---AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~~~~~~~  106 (228)
                      .|+++||+||++++|.+.++.+...|+   +|++++++.++.+.+.+++     +...   ..|..+.++....+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999998877776676   9999999988877665343     3211   2355554355555554433


Q ss_pred             --CCccEEEcCcc
Q 027106          107 --DGIDIYFDNVG  117 (228)
Q Consensus       107 --~~~d~vld~~g  117 (228)
                        +++|++++++|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999887

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.10  E-value=1.2e-05  Score=60.97  Aligned_cols=79  Identities=20%  Similarity=0.164  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-c--eeeccChhhHHHHHHHHCC--CCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFD-D--AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      ++++||+||+|++|..++..+...|++|+++++++++.+.+.+++    +.. .  ..|..+.+++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988889999999999988776655344    221 1  1344444233333332211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.09  E-value=3.2e-05  Score=62.93  Aligned_cols=101  Identities=19%  Similarity=0.114  Sum_probs=74.4

Q ss_pred             HHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106           26 AYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        26 a~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      .+.++.+. ...-.|++|+|.| .|.+|..+++.++.+|++|+++++++.+...+. ..|... .      ++.+.+.  
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~v-v------~LeElL~--  301 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFEV-V------TLDDAAS--  301 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCEE-C------CHHHHGG--
T ss_pred             HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCcee-c------cHHHHHh--
Confidence            33444332 3456899999999 499999999999999999999998887765555 556532 2      2222222  


Q ss_pred             CCCCccEEEcCcchh-H-HHHHHHccccCcEEEEEeee
Q 027106          105 FPDGIDIYFDNVGAE-M-QEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       105 ~~~~~d~vld~~g~~-~-~~~~~~~l~~~G~~v~~g~~  140 (228)
                         ..|+|+.+.+.. . -...+..|++++.++.+|..
T Consensus       302 ---~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          302 ---TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             ---GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             ---hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence               479999998764 3 36788999999999998854

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.09  E-value=4.3e-06  Score=63.86  Aligned_cols=104  Identities=12%  Similarity=0.152  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH---HHHHhCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL---LKDKLGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~---~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++.+.   +. +.|...   ..|..+..+..+.+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999888899999999987654333   33 344322   2345544233333333222  479


Q ss_pred             cEEEcCcch----------hHH---------------HHHHHccc-cCcEEEEEeeecc
Q 027106          110 DIYFDNVGA----------EMQ---------------EAAIANMN-TYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~----------~~~---------------~~~~~~l~-~~G~~v~~g~~~~  142 (228)
                      |++++++|.          +.|               +.+++.|+ .+|++|.+++..+
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            999999873          112               33445554 4799999987654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.09  E-value=1.2e-05  Score=56.51  Aligned_cols=93  Identities=16%  Similarity=0.118  Sum_probs=59.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ....++++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++++.|.. ++..+.. + .+.+.+..-.++|+||
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVF   89 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEE
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEE
Confidence            34567899999995 99999999999999999999999988776554224443 2222211 2 1223322112699999


Q ss_pred             cCcchh-HHHHHHHcccc
Q 027106          114 DNVGAE-MQEAAIANMNT  130 (228)
Q Consensus       114 d~~g~~-~~~~~~~~l~~  130 (228)
                      .+++.+ ....+...++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999874 33333344443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.08  E-value=1.7e-05  Score=59.88  Aligned_cols=80  Identities=23%  Similarity=0.437  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc---eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD---AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      +++++||+||+|++|..+++.+...|++|+++++++++.+.+.++    .+...   ..|..+.+++...+.+..  .++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999998888999999999998776655422    34321   124444423333333221  136


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.08  E-value=1.5e-05  Score=62.11  Aligned_cols=80  Identities=10%  Similarity=0.228  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc---eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD---AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++    +...   ..|..+.+++...+.+..  .++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988889999999999987766544232    4321   134444423333333321  237


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.07  E-value=1.4e-05  Score=61.20  Aligned_cols=81  Identities=26%  Similarity=0.388  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc----eeeccChhhHHHHHHHHCC--
Q 027106           37 KKGEKVFVSAASG-SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        37 ~~g~~VlI~ga~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      -.|+++||+||+| ++|.++++.+...|++|++++++.++.+.+.+++   +...    ..|..+.+++...+.+...  
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            3578999999975 8999999988889999999999988776655444   2111    2344544333333333221  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus       100 g~id~li~~Ag  110 (266)
T 3o38_A          100 GRLDVLVNNAG  110 (266)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCcEEEECCC
Confidence            36999999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.07  E-value=9.5e-06  Score=61.79  Aligned_cols=77  Identities=14%  Similarity=0.037  Sum_probs=52.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD--KLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+.+  ..|... .++..+.+.+.+.+.+.. +++|++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nA   80 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   80 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECC
Confidence            479999999999999999999999999999988776555431  234322 223332223333333322 3699999987


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        81 g   81 (254)
T 1zmt_A           81 I   81 (254)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.07  E-value=2.2e-05  Score=59.39  Aligned_cols=81  Identities=17%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Cce--eec--cChhhHHHHHHHHCC-
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF--DDA--FNY--KEETDLKAALKRYFP-  106 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~~--~~~--~~~~~~~~~~~~~~~-  106 (228)
                      -+|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +.  ..+  ++.  .+.+++...+.+... 
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            36789999999999999999998899999999999988776654332   21  111  222  333233333332211 


Q ss_pred             -CCccEEEcCcc
Q 027106          107 -DGIDIYFDNVG  117 (228)
Q Consensus       107 -~~~d~vld~~g  117 (228)
                       +++|++++++|
T Consensus        92 ~g~id~lv~nAg  103 (247)
T 3i1j_A           92 FGRLDGLLHNAS  103 (247)
T ss_dssp             HSCCSEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence             36999999887

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.07  E-value=1.4e-05  Score=61.81  Aligned_cols=81  Identities=15%  Similarity=0.228  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---hCCCc---eeeccChhhH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-------------SKEKVTLLKDK---LGFDD---AFNYKEETDL   97 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-------------~~~~~~~~~~~---~g~~~---~~~~~~~~~~   97 (228)
                      -.|+++||+||++++|.++++.+...|++|+++++             ++++.+.+.+.   .|...   ..|..+.++.
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46889999999999999999998899999999987             56665554423   23221   2355544233


Q ss_pred             HHHHHHHCC--CCccEEEcCcc
Q 027106           98 KAALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        98 ~~~~~~~~~--~~~d~vld~~g  117 (228)
                      ...+.+...  +++|++++++|
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg  114 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAG  114 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333221  37999999887

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.07  E-value=2.4e-05  Score=59.68  Aligned_cols=80  Identities=20%  Similarity=0.274  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh-----CCC-c--eeeccChhhHHHHHHHH--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKL---FGCYVVGSAGSKEKVTLLKDKL-----GFD-D--AFNYKEETDLKAALKRY--  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~~~~~--  104 (228)
                      +|+++||+||++++|.+.++.+..   .|++|+++++++++.+.+.+++     +.. .  ..|..+.++....+.+.  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            467999999999999999887777   8999999999988776554343     321 1  23555543444444433  


Q ss_pred             --CCCCcc--EEEcCcc
Q 027106          105 --FPDGID--IYFDNVG  117 (228)
Q Consensus       105 --~~~~~d--~vld~~g  117 (228)
                        ..+++|  ++++++|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence              223677  9998876

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.06  E-value=1.1e-05  Score=61.58  Aligned_cols=80  Identities=18%  Similarity=0.240  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|+++ .++.++.+.+.+++   |...   ..|..+.++....+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999886 77877666554333   3221   1344444233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (258)
T 3oid_A           83 LDVFVNNAA   91 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.06  E-value=1.8e-05  Score=61.25  Aligned_cols=78  Identities=27%  Similarity=0.280  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc----eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD----AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~----~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      +|.+|||+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...    ..|..+.++....+.+..  .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999998888999999999998877655422   34321    134444323333333221  137


Q ss_pred             ccEEEcC
Q 027106          109 IDIYFDN  115 (228)
Q Consensus       109 ~d~vld~  115 (228)
                      +|+++++
T Consensus       107 iD~li~n  113 (286)
T 1xu9_A          107 LDMLILN  113 (286)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999988

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.06  E-value=3.8e-06  Score=64.01  Aligned_cols=95  Identities=14%  Similarity=0.170  Sum_probs=62.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +++||+||+|++|.++++.+...|++|+++++++++.+    .   ....|..+.+++...+.++ .+++|++++++|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~---~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----A---DLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----c---ccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCC
Confidence            47999999999999999988889999999998764421    1   1112333221233333322 24789999998742


Q ss_pred             H-------------------HHHHHHcccc--CcEEEEEeeecc
Q 027106          120 M-------------------QEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       120 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      .                   .+.+++.+..  .|++|.+++...
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            1                   3344555543  389999987654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.06  E-value=4.1e-05  Score=59.43  Aligned_cols=76  Identities=21%  Similarity=0.194  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCc-eeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GFDD-AFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      -+|+++||+||+|++|.+++..+...|++|++++++.++.+.+.+++    +... ..|..+. +   .+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-H---HHHHHHH-hCCE
Confidence            46889999999999999999999999999999999988776554343    3222 2344443 2   2222222 4899


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999997

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.06  E-value=1.6e-05  Score=61.24  Aligned_cols=78  Identities=15%  Similarity=0.255  Sum_probs=56.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-c--eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--D-D--AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+.+++..  . .  ..|..+.+++...+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999998888999999999998887766545532  1 1  2355554344444444322  368999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus       102 vnnAG  106 (272)
T 2nwq_A          102 INNAG  106 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99886

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.06  E-value=1.4e-05  Score=61.04  Aligned_cols=79  Identities=10%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK--VTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      |+++||+||+|++|.+.++.+...|++|+++++++++  .+.+.+++   +...   ..|..+.+++...+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6789999999999999998888889999999988766  44443233   3221   1344444233333332211  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        82 iD~lv~nAg   90 (258)
T 3a28_C           82 FDVLVNNAG   90 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.05  E-value=1.8e-05  Score=61.29  Aligned_cols=80  Identities=11%  Similarity=0.212  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCCc---eeeccChhhHHHHHHHHC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL----GFDD---AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .++++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+++    +...   ..|..+.++....+.+..  .+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            5789999999999999999998899999999998 555555444233    2211   134444423333333322  13


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus       104 ~iD~lv~nAg  113 (281)
T 3v2h_A          104 GADILVNNAG  113 (281)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.05  E-value=2.5e-05  Score=60.95  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CCCc---eeeccChhhHHHHHHHHCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL--------GFDD---AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~~~---~~~~~~~~~~~~~~~~~~~  106 (228)
                      .|++|||+||+|++|..+++.+...|++|++++++.++.+.+.+++        +...   ..|..+.+++...+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999988889999999999987766554332        2211   1344443233333333211


Q ss_pred             --CCccEEEcCcc
Q 027106          107 --DGIDIYFDNVG  117 (228)
Q Consensus       107 --~~~d~vld~~g  117 (228)
                        +++|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.05  E-value=4e-06  Score=63.63  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.   +  ...|..+.++....+.+...  +++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999988889999999998765432211   1  22344444233333332211  368999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        89 Ag   90 (247)
T 1uzm_A           89 AG   90 (247)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.04  E-value=1.5e-05  Score=60.52  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .+.+|||+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++...+.+...  +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999988889999999999987765544232   3321   1344443233333332211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        90 d~vi~~Ag   97 (255)
T 1fmc_A           90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.04  E-value=1.2e-05  Score=61.74  Aligned_cols=103  Identities=17%  Similarity=0.267  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeeccChhhHHHHHHHHCCCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-DD----AFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~----~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      .|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++   +. ..    ..|..+.+.+...+.+ . +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-Y-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-C-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-c-CCC
Confidence            5789999999999999999988889999999999987765544232   11 11    1244444233333332 2 479


Q ss_pred             cEEEcCcch-----------hH---------------HHHHHHcc--ccCcEEEEEeeecc
Q 027106          110 DIYFDNVGA-----------EM---------------QEAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~-----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      |++++++|.           +.               .+.+++.+  +.+|++|.+++..+
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  147 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA  147 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhh
Confidence            999999872           11               23334444  34589999887654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.04  E-value=1.6e-05  Score=61.55  Aligned_cols=80  Identities=20%  Similarity=0.219  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHh---CCCc---eeeccChh
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS----------------KEKVTLLKDKL---GFDD---AFNYKEET   95 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~----------------~~~~~~~~~~~---g~~~---~~~~~~~~   95 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++                .++.+.+.+++   +...   ..|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999988999999999876                55555444232   3221   23455442


Q ss_pred             hHHHHHHHHCC--CCccEEEcCcc
Q 027106           96 DLKAALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        96 ~~~~~~~~~~~--~~~d~vld~~g  117 (228)
                      +....+.+...  +++|++++++|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            33333333221  36999999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.03  E-value=2.1e-05  Score=60.06  Aligned_cols=80  Identities=14%  Similarity=0.116  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---C-------C-Cc--eeeccChhhHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---G-------F-DD--AFNYKEETDLKAALKRY  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g-------~-~~--~~~~~~~~~~~~~~~~~  104 (228)
                      ++++|||+||+|++|..+++.+...|++|+++++++++.+.+.+++   |       . ..  ..|..+.+.+...+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            5789999999999999999988889999999999988776654233   1       1 11  13444432333333332


Q ss_pred             CC--CCc-cEEEcCcc
Q 027106          105 FP--DGI-DIYFDNVG  117 (228)
Q Consensus       105 ~~--~~~-d~vld~~g  117 (228)
                      ..  +++ |++++++|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            11  356 99999887

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.03  E-value=1.1e-05  Score=61.42  Aligned_cols=79  Identities=24%  Similarity=0.276  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      |+++||+||++++|.+.++.+...  |++|+.+++++++.+.+.++++...   ..|..+.++....+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            678999999999999988766655  5799999999988877775665421   2344544233333333221  37999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        82 lvnnAg   87 (254)
T 3kzv_A           82 LVANAG   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            999877

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.03  E-value=1.2e-05  Score=61.17  Aligned_cols=81  Identities=19%  Similarity=0.310  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|++|||+||+|++|..+++.+...|++|++++++ +++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999888899999999987 66554443232   321 1  1344444234333333221  36


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.03  E-value=2.4e-05  Score=60.06  Aligned_cols=105  Identities=18%  Similarity=0.292  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++.+|||+||+|++|..+++.+...|++|+++++ ++++.+.+.++   .+...   ..|..+.+++...+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988889999999998 66665544322   34321   2344444233333332221  36


Q ss_pred             ccEEEcCcchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|++++++|..           .+               +.+++.++.+|+++.+++...
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~  159 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  159 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHh
Confidence            99999988621           11               222344445689999887543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.02  E-value=1.5e-05  Score=59.81  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|||+||+|++|..+++.+...|.+|+++++++++.+.+. ..+...++.. +. .  +.+.+.. +++|+|++++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~-Dl-~--~~~~~~~-~~~D~vi~~ag   93 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVA-NL-E--EDFSHAF-ASIDAVVFAAG   93 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEEC-CT-T--SCCGGGG-TTCSEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEc-cc-H--HHHHHHH-cCCCEEEECCC
Confidence            5789999999999999999998889999999999998887776 5555122211 11 1  2222222 26999999987


Q ss_pred             hh--------------HHHHHHHcccc--CcEEEEEeeec
Q 027106          118 AE--------------MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus       118 ~~--------------~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                      ..              ....+++.++.  .++++.++...
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            42              11223333332  47899988754

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.02  E-value=2e-05  Score=60.10  Aligned_cols=80  Identities=15%  Similarity=0.214  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      ++++|||+||+|++|..+++.+...|++|+++++ ++++.+.+.+++   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999888889999999998 776655443232   321 1  1344443233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++|+++|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.02  E-value=1.9e-05  Score=60.45  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHH---HHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALK---RYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~---~~~~~~  108 (228)
                      ++++|||+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+.+++...+.   +..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999998889999999999887765543232   3321   134444323333332   222247


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        93 id~li~~Ag  101 (266)
T 1xq1_A           93 LDILINNLG  101 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CcEEEECCC
Confidence            999999887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.02  E-value=1.4e-05  Score=61.44  Aligned_cols=80  Identities=16%  Similarity=0.221  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|+++||+||++++|.++++.+...|++|+++++ +.++.+.+.++   .|...   ..|..+.++....+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988889999999887 55555444322   33321   2345544233333333221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       107 id~lv~nAg  115 (269)
T 4dmm_A          107 LDVLVNNAG  115 (269)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.01  E-value=1.7e-05  Score=61.39  Aligned_cols=80  Identities=14%  Similarity=0.328  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .+++|||+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +...   ..|..+.+++...+.+..  .+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999988888999999988877765544233   3321   134444423333333321  2369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++|+++|
T Consensus       123 d~li~~Ag  130 (285)
T 2c07_A          123 DILVNNAG  130 (285)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.00  E-value=2.7e-05  Score=60.19  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCc---eeeccChhhHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------------KEKVTLLKD---KLGFDD---AFNYKEETDLKA   99 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~   99 (228)
                      .|+++||+||++++|.++++.+...|++|++++++            .++.+...+   +.|...   ..|..+.++...
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999986            444433321   334322   234454423333


Q ss_pred             HHHHHCC--CCccEEEcCcc
Q 027106          100 ALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus       100 ~~~~~~~--~~~d~vld~~g  117 (228)
                      .+.+...  +++|++++++|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            3333221  37999999887

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.00  E-value=2.2e-05  Score=59.19  Aligned_cols=79  Identities=14%  Similarity=0.162  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGC-------YVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF  105 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~-------~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~  105 (228)
                      +++|||+||+|++|..+++.+...|+       +|+++++++++.+.+.+++   +.. .  ..|..+.+.+...+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999988888898       9999999988776655343   321 1  134444423333333221


Q ss_pred             --CCCccEEEcCcc
Q 027106          106 --PDGIDIYFDNVG  117 (228)
Q Consensus       106 --~~~~d~vld~~g  117 (228)
                        .+++|++++++|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              136999999887

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.00  E-value=2.4e-05  Score=58.94  Aligned_cols=79  Identities=19%  Similarity=0.214  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCCc----eeeccChhhHHHHHHHHCC--CC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDK---LGFDD----AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~----~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +++|||+||+|++|..+++.+...|++|+++ .+++++.+.+.++   .+...    ..|..+.++..+.+.+...  ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999888899999998 7887766554323   23321    1244444233333332211  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.00  E-value=2.8e-05  Score=59.95  Aligned_cols=105  Identities=18%  Similarity=0.234  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCc---eeeccChhhHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------------KEKVTLLKD---KLGFDD---AFNYKEETDLKA   99 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~   99 (228)
                      .|+++||+||++++|.+.++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+.++...
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            67899999999999999999988999999999876            554443321   334321   234444433333


Q ss_pred             HHHHHCC--CCccEEEcCcchh----------------------HHHHHHHccc---cCcEEEEEeeecc
Q 027106          100 ALKRYFP--DGIDIYFDNVGAE----------------------MQEAAIANMN---TYGRVAVCGVISE  142 (228)
Q Consensus       100 ~~~~~~~--~~~d~vld~~g~~----------------------~~~~~~~~l~---~~G~~v~~g~~~~  142 (228)
                      .+.+...  +++|++++++|..                      ..+.+++.+.   .+|++|.+++..+
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            3333221  3799999998731                      1122344443   2689999887654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.00  E-value=1.7e-05  Score=61.21  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---hCCCc---eeeccChhhHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-------------SKEKVTLLKDK---LGFDD---AFNYKEETDLK   98 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-------------~~~~~~~~~~~---~g~~~---~~~~~~~~~~~   98 (228)
                      .|+++||+||++++|.++++.+...|++|+++++             +.++.+.+.+.   .+...   ..|..+.++..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999998899999999987             55555444322   23321   23444442333


Q ss_pred             HHHHHHCC--CCccEEEcCcc
Q 027106           99 AALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        99 ~~~~~~~~--~~~d~vld~~g  117 (228)
                      ..+.+...  +++|++++++|
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg  110 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            33333221  36999999887

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.00  E-value=2.8e-05  Score=60.71  Aligned_cols=81  Identities=15%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCc---eeeccChhhHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------------KEKVTLLKD---KLGFDD---AFNYKEETDLK   98 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~   98 (228)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+.+   ..|...   ..|..+.++..
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            357899999999999999999988999999999876            554444332   334321   23555442333


Q ss_pred             HHHHHHCC--CCccEEEcCcc
Q 027106           99 AALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        99 ~~~~~~~~--~~~d~vld~~g  117 (228)
                      ..+.+...  +++|++++++|
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHhCCCCEEEECCC
Confidence            33333221  37999999887

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.99  E-value=4.4e-05  Score=57.94  Aligned_cols=104  Identities=9%  Similarity=0.043  Sum_probs=71.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.++.+||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+....+
T Consensus        57 ~l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~  133 (248)
T 3tfw_A           57 LLVRLTQAKRILEIG--TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGE  133 (248)
T ss_dssp             HHHHHHTCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCS
T ss_pred             HHHhhcCCCEEEEec--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCC
Confidence            334566889999999  45688888999887  46999999999988887743   355422222222 44444444433


Q ss_pred             C-CccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          107 D-GIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~-~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      . .||+|+-....    ..+..+.+.|+|||.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          134 CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            2 79999843322    37888899999999888754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.99  E-value=2.4e-05  Score=59.19  Aligned_cols=77  Identities=16%  Similarity=0.279  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|+++||+||+|++|.++++.+...|++|+++++++++.+.+. +++...  ..|..+.+++. .+.+.. +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID-QFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH-HHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH-HHHHHh-CCCCEEEEC
Confidence            4789999999999999999998889999999999887765544 332111  23444442333 333322 469999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.98  E-value=8.7e-05  Score=51.07  Aligned_cols=95  Identities=15%  Similarity=0.109  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ..++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++ +.|...+. |..+. +   .+.+..-.++|+++-++
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~-~---~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE-E---IMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH-H---HHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH-H---HHHhcCcccCCEEEEEC
Confidence            4578999995 99999999999999999999999999999988 77774432 33332 2   22222112689999998


Q ss_pred             chh----HHHHHHHccccCcEEEEEe
Q 027106          117 GAE----MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       117 g~~----~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.+    ..-...+.+.+..+++...
T Consensus        80 ~~~~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence            864    2333455666777766643

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.98  E-value=4.4e-05  Score=56.13  Aligned_cols=101  Identities=14%  Similarity=0.182  Sum_probs=70.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD-DAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+.++++||-.|+ | .|..++.+++. +.+|++++.+++..+.+++.   +|.. .+-... . +..+.+..  .+
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~-~-d~~~~~~~--~~  121 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQ-G-TAPAALAD--LP  121 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE-S-CTTGGGTT--SC
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEe-C-chhhhccc--CC
Confidence            5567899999999994 4 48888888888 88999999999988887743   3554 321111 1 21111111  12


Q ss_pred             CccEEEcCcch--hHHHHHHHccccCcEEEEEee
Q 027106          108 GIDIYFDNVGA--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       108 ~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .+|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       122 ~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          122 LPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             CCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            69999866542  278889999999999998653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.98  E-value=1.8e-05  Score=60.11  Aligned_cols=75  Identities=16%  Similarity=0.298  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      +|+++||+||+|++|.+.++.+...|++|++++++++.    + +.+... ..|..+.+++...+.+..  .+++|++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999987542    2 334211 234444423433333321  237999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        81 ~Ag   83 (250)
T 2fwm_X           81 AAG   83 (250)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.98  E-value=1.5e-05  Score=61.82  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCCc---eeeccChhhHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-----------VTLLKDKLGFDD---AFNYKEETDLKAALKR  103 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~~~~~  103 (228)
                      +|+++||+||++++|.++++.+...|++|++++++.++           .+.++ ..+...   ..|..+.++....+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            57899999999999999999888899999999987652           22233 344321   2355554333333333


Q ss_pred             HCC--CCccEEEcCcc
Q 027106          104 YFP--DGIDIYFDNVG  117 (228)
Q Consensus       104 ~~~--~~~d~vld~~g  117 (228)
                      ...  +++|++++++|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            222  37999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.98  E-value=1.8e-05  Score=59.68  Aligned_cols=75  Identities=19%  Similarity=0.286  Sum_probs=51.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      ++++||+||+|++|.++++.+...|++|+++++++++  ..+ ++|... ..|..+. +....+.+...  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999988899999999988766  233 556321 1233332 33333332211  369999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.97  E-value=6e-05  Score=55.91  Aligned_cols=92  Identities=13%  Similarity=0.024  Sum_probs=63.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+. ..+...+ .|..+. +.    ..+  +++|+||+++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE----ADL--DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH----HHH--TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH----hhc--ccCCEEEECCccC
Confidence            6999999999999999998889999999999988766544 2333221 233333 22    111  3699999998751


Q ss_pred             -----------HHHHHHHcccc-CcEEEEEeee
Q 027106          120 -----------MQEAAIANMNT-YGRVAVCGVI  140 (228)
Q Consensus       120 -----------~~~~~~~~l~~-~G~~v~~g~~  140 (228)
                                 ....+++.++. +++++.+++.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       33445555544 5788888754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.97  E-value=2.5e-05  Score=60.75  Aligned_cols=45  Identities=16%  Similarity=0.096  Sum_probs=38.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDK   82 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~   82 (228)
                      .|+++||+||++++|.++++.+...|++|++++ ++.++.+.+.++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~   53 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   53 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence            578999999999999999999888999999999 988876655433

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.97  E-value=2.4e-05  Score=58.64  Aligned_cols=103  Identities=10%  Similarity=0.072  Sum_probs=69.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-C
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-P  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-~  106 (228)
                      ......++++||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++.   .|...-+..... +..+.+.... +
T Consensus        48 ~~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  124 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELY  124 (233)
T ss_dssp             HHHHHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTS
T ss_pred             HHHhccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccC
Confidence            3445678899999993  4788888999887 57999999999988888743   254221211111 2222222222 2


Q ss_pred             CCccEEEcCcch----hHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVGA----EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+|+.....    ..+..+.+.|++||+++..
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            479999876552    4778888999999999885

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.96  E-value=2e-05  Score=60.57  Aligned_cols=80  Identities=23%  Similarity=0.388  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .|++|||+||++++|.++++.+...|++|+++++ +++..+.+.+   +.+...   ..|..+.++....+.+...  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999888889999999998 4444443332   334321   1344443233333333221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       108 id~li~nAg  116 (271)
T 4iin_A          108 LSYLVNNAG  116 (271)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.95  E-value=2.4e-05  Score=61.74  Aligned_cols=80  Identities=21%  Similarity=0.249  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---------GSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---------~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      .|+++||+||+|++|..+++.+...|++|++++         ++.++.+.+.++   .+...+.|..+.++....+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999998888999999964         345554433322   34333456555433333332221


Q ss_pred             --CCCccEEEcCcc
Q 027106          106 --PDGIDIYFDNVG  117 (228)
Q Consensus       106 --~~~~d~vld~~g  117 (228)
                        .+++|++|+++|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              237999999887

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.95  E-value=3.4e-05  Score=58.09  Aligned_cols=104  Identities=12%  Similarity=0.108  Sum_probs=70.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-  105 (228)
                      ...++.++++||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .|....+..... +..+.+.... 
T Consensus        54 ~l~~~~~~~~VLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~  130 (239)
T 2hnk_A           54 ILTKISGAKRIIEIG--TFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLID  130 (239)
T ss_dssp             HHHHHHTCSEEEEEC--CTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCcCEEEEEe--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHh
Confidence            334567889999999  44788999999987  56999999999988887743   354321222112 3333222221 


Q ss_pred             -------------C-CCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          106 -------------P-DGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 -------------~-~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                                   + +.||+|+.....    ..+..+.+.|++||.++...
T Consensus       131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          131 SKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                         1 579999876553    36788889999999999753

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.95  E-value=2.9e-05  Score=61.37  Aligned_cols=80  Identities=18%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-----KEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-----~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~  106 (228)
                      +++++||+||+|++|.++++.+...|++|++++++     .++.+.+.+   ..+...   ..|..+.+++...+.+...
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999988765     344444331   234321   2344444344444433321


Q ss_pred             --CCccEEEcCcc
Q 027106          107 --DGIDIYFDNVG  117 (228)
Q Consensus       107 --~~~d~vld~~g  117 (228)
                        +++|++++++|
T Consensus        84 ~~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 EDGRIDVLIHNAG   96 (324)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              47999999988

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.95  E-value=6.9e-05  Score=58.46  Aligned_cols=103  Identities=9%  Similarity=0.047  Sum_probs=72.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +....++++|++||-.|  .|.|..+..+++..|++|++++.+++..+.+++.   .|...-+..... ++.    ++ .
T Consensus        64 ~~~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEee--ccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            44566789999999999  3458889999998899999999999988888743   243211111111 221    12 4


Q ss_pred             CCccEEEcCcc----------------hhHHHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDNVG----------------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~~g----------------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.||+|+....                ...+..+.++|+|||+++.....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            58999986321                14678888999999999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.94  E-value=3.9e-05  Score=59.06  Aligned_cols=79  Identities=25%  Similarity=0.340  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHHhCCC---ceeeccChhhHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK-------VT----LLKDKLGFD---DAFNYKEETDLKAALKR  103 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~-------~~----~~~~~~g~~---~~~~~~~~~~~~~~~~~  103 (228)
                      +|+++||+||++++|.++++.+...|++|++++++.++       .+    .++ ..+..   ...|..+.++....+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            57899999999999999999888899999999987542       22    222 33432   12355544233333333


Q ss_pred             HCC--CCccEEEcCcc
Q 027106          104 YFP--DGIDIYFDNVG  117 (228)
Q Consensus       104 ~~~--~~~d~vld~~g  117 (228)
                      ...  +++|++++++|
T Consensus        84 ~~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           84 TVDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            222  37999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.94  E-value=2.9e-05  Score=61.43  Aligned_cols=45  Identities=16%  Similarity=0.096  Sum_probs=39.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDK   82 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~   82 (228)
                      .|+++||+||++++|.++++.+...|++|++++ +++++.+.+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            578999999999999999999989999999999 888877665533

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.93  E-value=6.4e-06  Score=61.99  Aligned_cols=97  Identities=19%  Similarity=0.122  Sum_probs=63.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ..+|||+||+|++|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+.+++...+.     ++|+||+++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcC
Confidence            4689999999999999999999999 79999999877643322 112211 124444323332222     589999988


Q ss_pred             chh----HHHHHHHcccc--CcEEEEEeeec
Q 027106          117 GAE----MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus       117 g~~----~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                      +..    ..+.+++.++.  .+++|.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            863    33445555544  36899887644

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.93  E-value=3.2e-05  Score=59.77  Aligned_cols=81  Identities=12%  Similarity=0.155  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCce--eeccChhhHHHHHHHHC--CCC
Q 027106           37 KKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKDKLGFDDA--FNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      -+|+++||+||+  +|+|.++++.+...|++|++++++.  +..+.+.++.+....  .|..+.++..+.+.+..  .++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999988  6699999988888999999999876  555655534443222  34444423333333322  147


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       104 id~li~nAg  112 (280)
T 3nrc_A          104 LDAIVHSIA  112 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999887

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.93  E-value=2.6e-05  Score=59.03  Aligned_cols=80  Identities=24%  Similarity=0.339  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .++++||+||++++|.+.++.+...|++|+++++ +.++.+.+.++   .|...   ..|..+.++....+.+...  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999998899999988876 44555444322   34322   1344444233333333221  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        83 id~lv~nAg   91 (246)
T 3osu_A           83 LDVLVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.93  E-value=3.6e-05  Score=60.60  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCc---eeeccChhhHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------------KEKVTLLKD---KLGFDD---AFNYKEETDLK   98 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~   98 (228)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+.+   +.|...   ..|..+.++..
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            367899999999999999999999999999998765            444443321   334322   23444442343


Q ss_pred             HHHHHHCC--CCccEEEcCcc
Q 027106           99 AALKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus        99 ~~~~~~~~--~~~d~vld~~g  117 (228)
                      ..+.+...  +++|++++++|
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            33333222  37999999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.92  E-value=6.3e-05  Score=57.04  Aligned_cols=74  Identities=27%  Similarity=0.304  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .-+|+++||+||+|++|.++++.+...|++|++++++++.   ++ +++.... .|. .. +....+.+..  ++|++++
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEE
Confidence            3568899999999999999999888899999999988743   33 4442121 233 11 3333333332  6999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        88 ~Ag   90 (249)
T 1o5i_A           88 NAG   90 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.92  E-value=3e-05  Score=59.73  Aligned_cols=79  Identities=13%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHC-CCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYF-PDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~-~~~~d  110 (228)
                      .|+++||+||++++|.++++.+...|++|+++++++...+.++ ++   +.. .  ..|..+.++......... .+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999999988899999999996654333333 33   221 1  234444322222211111 14799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus       109 ~lv~nAg  115 (273)
T 3uf0_A          109 VLVNNAG  115 (273)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.91  E-value=4.9e-05  Score=56.20  Aligned_cols=91  Identities=20%  Similarity=0.172  Sum_probs=62.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+.  .+... ..|..+. +.    ..+  +++|+||+++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL----SDL--SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH----HHH--TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh----hhh--cCCCEEEECCcCC
Confidence            6999999999999999999999999999999987765432  22221 1233332 22    222  3699999998742


Q ss_pred             ---------HHHHHHHcccc--CcEEEEEeee
Q 027106          120 ---------MQEAAIANMNT--YGRVAVCGVI  140 (228)
Q Consensus       120 ---------~~~~~~~~l~~--~G~~v~~g~~  140 (228)
                               ....+++.++.  .++++.+++.
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                     33455666655  3688888754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.91  E-value=1.9e-05  Score=60.38  Aligned_cols=74  Identities=14%  Similarity=0.219  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ceeeccChhhHHHHHHHHC--CCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD--DAFNYKEETDLKAALKRYF--PDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~--~~~~d~vl  113 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++      .....  ...|..+.++....+.+..  -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            78999999999999999999999999999999986532      11111  1234444423333333222  14799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.91  E-value=7.3e-05  Score=56.74  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=73.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      +....++++|++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.   .|....+..... ++.+   .+
T Consensus        85 i~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~---~~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYE---GI  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGG---CC
T ss_pred             HHHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhh---cc
Confidence            335678899999999993 4 488888998885  56999999999988888743   354331222111 2221   12


Q ss_pred             CCCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.+|+|+...+.  ..+..+.+.|+++|+++.+.
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            22379999977665  38999999999999999875

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.90  E-value=5.2e-05  Score=56.89  Aligned_cols=103  Identities=11%  Similarity=0.087  Sum_probs=70.0

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC--
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF--  105 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~--  105 (228)
                      ..+..++++||-.|  .+.|..++.+++..  +.+|++++.+++..+.+++.   .|....+..... +..+.+..+.  
T Consensus        67 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~  143 (232)
T 3cbg_A           67 LISLTGAKQVLEIG--VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQG  143 (232)
T ss_dssp             HHHHHTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTS
T ss_pred             HHHhcCCCEEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhc
Confidence            34456788999999  45888999999886  46999999999988887733   355322222222 3333333332  


Q ss_pred             C--CCccEEEcCcc-h---hHHHHHHHccccCcEEEEEe
Q 027106          106 P--DGIDIYFDNVG-A---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~--~~~d~vld~~g-~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +  +.||+||-... .   ..+..+.++|++||.++.-.
T Consensus       144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            1  47999984332 2   37888899999999998853

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.89  E-value=3.9e-05  Score=60.55  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHH---HhCCCc---eeeccChhhHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS----------KEKVTLLKD---KLGFDD---AFNYKEETDLKAA  100 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~----------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~  100 (228)
                      -.|+++||+||++++|.+.++.+...|++|++++++          .++.+.+.+   ..|...   ..|..+.++....
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            367899999999999999999888899999999876          344333332   234311   1244443233333


Q ss_pred             HHHHCC--CCccEEEcCcc
Q 027106          101 LKRYFP--DGIDIYFDNVG  117 (228)
Q Consensus       101 ~~~~~~--~~~d~vld~~g  117 (228)
                      +.+...  +++|++++++|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            333221  37999999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.89  E-value=4.5e-05  Score=57.93  Aligned_cols=105  Identities=17%  Similarity=0.173  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHh-CCC-c--eeeccCh-hhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSK--EKVTLLKDKL-GFD-D--AFNYKEE-TDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~--~~~~~~~~~~-g~~-~--~~~~~~~-~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||+|++|.++++.+...|++ |+++++++  +..+.+.+.. +.. .  ..|..+. ++..+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4789999999999999999988889995 88888765  3444444232 211 1  1344432 244333333221  3


Q ss_pred             CccEEEcCcch---h---------------HHHHHHHcccc-----CcEEEEEeeecc
Q 027106          108 GIDIYFDNVGA---E---------------MQEAAIANMNT-----YGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~---~---------------~~~~~~~~l~~-----~G~~v~~g~~~~  142 (228)
                      ++|++++++|.   +               ..+.+++.+..     +|+++.+++..+
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            69999999872   1               12333444432     589999887654

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.89  E-value=5.7e-05  Score=57.83  Aligned_cols=96  Identities=16%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      .++.+||..|+ |. |..+..+++.. +.+|++++.++...+.++ +.+....+...+..++     ....+.||+|+..
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~  155 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSHRL-----PFSDTSMDAIIRI  155 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTTSC-----SBCTTCEEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchhhC-----CCCCCceeEEEEe
Confidence            68899999994 65 88888999886 679999999999999998 5543221211111011     1122479999965


Q ss_pred             cchhHHHHHHHccccCcEEEEEeee
Q 027106          116 VGAEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       116 ~g~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .....+..+.+.|+|+|+++.....
T Consensus       156 ~~~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          156 YAPCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             SCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             CChhhHHHHHHhcCCCcEEEEEEcC
Confidence            5556889999999999999987643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.89  E-value=4.5e-05  Score=58.34  Aligned_cols=80  Identities=23%  Similarity=0.269  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHhCCCc---eeeccChhhHHHHHHHHC--
Q 027106           38 KGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKE-----KVTLLKDKLGFDD---AFNYKEETDLKAALKRYF--  105 (228)
Q Consensus        38 ~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~-----~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--  105 (228)
                      +|+++||+||+  +++|.++++.+...|++|++++++..     ..+.+.+..+...   ..|..+.++....+.+..  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999998  89999999888889999999887643     2233332345321   234444423333333321  


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      .+++|++++++|
T Consensus        99 ~g~id~li~nAg  110 (267)
T 3gdg_A           99 FGQIDAFIANAG  110 (267)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            137999999887

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.88  E-value=1.2e-05  Score=61.88  Aligned_cols=78  Identities=21%  Similarity=0.247  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCC--CCccE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      ...+|++|||+||++++|.++++.+...|++|++++++++...    . ... ...|..+.++....+.+...  +++|+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999988889999999998765431    1 111 12355544333333333222  37999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        85 lv~nAg   90 (269)
T 3vtz_A           85 LVNNAG   90 (269)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.88  E-value=4.9e-05  Score=58.39  Aligned_cols=82  Identities=20%  Similarity=0.173  Sum_probs=54.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--  106 (228)
                      ..++++|||+||++++|.++++.+...|++|+++ .++.++.+.+.++   .+...   ..|..+.++....+.+...  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999776 6676665554422   23211   1244444233333333221  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999877

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=97.86  E-value=0.00012  Score=55.08  Aligned_cols=102  Identities=17%  Similarity=0.077  Sum_probs=68.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC---
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF---  105 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~---  105 (228)
                      ....++++||-.|  ++.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+..+.   
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence            4456778999998  66788888898886  56999999999988887733   355321222212 3333333221   


Q ss_pred             --CCCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          106 --PDGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 --~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                        .+.||+||-....    ..+..+.++|++||.++.-.
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence              3479998854332    37788899999999988743

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.86  E-value=3.9e-05  Score=58.52  Aligned_cols=80  Identities=11%  Similarity=0.133  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHhCCCc---eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT----LLKDKLGFDD---AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~----~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      .+++|||+||+|++|..+++.+...|++|++++++.++.+    .+.++.+...   ..|..+.+++...+.+..  -++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4679999999999999999988889999999998544322    2221234321   234444423433333322  136


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        93 id~li~~Ag  101 (265)
T 1h5q_A           93 ISGLIANAG  101 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.85  E-value=4.7e-05  Score=61.83  Aligned_cols=85  Identities=19%  Similarity=0.165  Sum_probs=56.5

Q ss_pred             hcCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------H-HHHHHHhCCCc---eeec
Q 027106           33 IGKP-KKGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEK---------------V-TLLKDKLGFDD---AFNY   91 (228)
Q Consensus        33 ~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~---------------~-~~~~~~~g~~~---~~~~   91 (228)
                      ..++ +.|+++||+||++|+|++.++.+.. .|++|++++++.+.               . +.++ +.|...   ..|.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecC
Confidence            3456 4678999999999999998877777 99999998865432               1 3344 566432   1344


Q ss_pred             cChhh---HHHHHHHHCCCCccEEEcCcch
Q 027106           92 KEETD---LKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        92 ~~~~~---~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      .+.+.   ..+.+.+..+|++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            44322   3334444443579999998864

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.85  E-value=9.9e-05  Score=57.96  Aligned_cols=103  Identities=16%  Similarity=0.186  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +....++.++++||-.|+ | .|..+..+++..|++|++++.+++..+.+++.+   |...-+..... ++    .++ +
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~  153 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-A  153 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-C
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-C
Confidence            335567889999999994 4 488888999888999999999999988887432   33221111111 21    111 2


Q ss_pred             CCccEEEcC-----cch----hHHHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDN-----VGA----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.||+|+..     .+.    ..+..+.++|+|||+++.....
T Consensus       154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            579999865     331    3778888999999999986643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.85  E-value=1.2e-05  Score=60.84  Aligned_cols=100  Identities=14%  Similarity=0.056  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +++++||+||++++|.+.++.+.. .|++|+.++++++ ..+    +.- ....|..+.++....+.....+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cce-EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            577999999999999998876665 6789998887654 111    110 112344544344444433333489999999


Q ss_pred             cchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          116 VGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       116 ~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|..           .+               +.+++.+.++|+++.++....
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            8731           11               223345556789999887554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.84  E-value=2.8e-05  Score=58.70  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCC-c--eeeccChhhHHHHHHH---HCCC-
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKL-GFD-D--AFNYKEETDLKAALKR---YFPD-  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~-g~~-~--~~~~~~~~~~~~~~~~---~~~~-  107 (228)
                      ++++|||+||+|++|..+++.+...|  ++|++++++.++.+.++ +. +.. .  ..|..+.+.+.+.+.+   ..+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            46799999999999999999888899  99999999988777666 44 221 1  2344443233333332   2221 


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++|+++|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            6999999886

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.84  E-value=0.00032  Score=51.24  Aligned_cols=102  Identities=11%  Similarity=0.070  Sum_probs=70.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...+++++++||-.|+ | .|..++.+++... .+|++++.+++..+.+++.   .|...+-... . +..+.+..  .+
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~-d~~~~~~~--~~  107 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVE-A-FAPEGLDD--LP  107 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEE-C-CTTTTCTT--SC
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe-C-Chhhhhhc--CC
Confidence            5678899999999993 4 5888888888853 6999999999988888732   3443221111 1 11111110  13


Q ss_pred             CccEEEcCcc----hhHHHHHHHccccCcEEEEEee
Q 027106          108 GIDIYFDNVG----AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       108 ~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .+|+|+....    ...+..+.+.|+++|+++....
T Consensus       108 ~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          108 DPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             CCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            6999987654    2488889999999999998653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.84  E-value=3.9e-05  Score=58.23  Aligned_cols=106  Identities=18%  Similarity=0.209  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHH---C-
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS-AGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRY---F-  105 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~---~-  105 (228)
                      -+|+++||+||++++|.+.++.+...|++|+++ .++.++.+.+.++   .+...   ..|..+..+....+.+.   . 
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            357899999999999999999988999999886 4555544433322   23211   12333332222222211   1 


Q ss_pred             ---C-CCccEEEcCcchh-----------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          106 ---P-DGIDIYFDNVGAE-----------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       106 ---~-~~~d~vld~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                         . +++|++++++|..           .+               +.+++.++++|+++.++....
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence               1 2599999988721           11               223345566799999887554

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.83  E-value=6.3e-05  Score=56.35  Aligned_cols=102  Identities=13%  Similarity=0.107  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-CceeeccC-hhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGF-DDAFNYKE-ETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~~~~~  107 (228)
                      ....++||++||=.|  .|.|..+..+|+..|.  +|++++.+++..+.+++.... ..+.+... ..+. ... ....+
T Consensus        71 ~~l~ikpG~~VldlG--~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p-~~~-~~~~~  146 (233)
T 4df3_A           71 IELPVKEGDRILYLG--IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP-EKY-RHLVE  146 (233)
T ss_dssp             SCCCCCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG-GGG-TTTCC
T ss_pred             hhcCCCCCCEEEEec--CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc-ccc-ccccc
Confidence            346789999999999  5678889999999875  899999999988888744332 12211111 0010 000 11123


Q ss_pred             CccEEEcCcch-----hHHHHHHHccccCcEEEEE
Q 027106          108 GIDIYFDNVGA-----EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       108 ~~d~vld~~g~-----~~~~~~~~~l~~~G~~v~~  137 (228)
                      .+|+|+.....     ..+..+.+.|+|+|+++++
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            68988764442     2677788999999999875

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.83  E-value=0.00015  Score=58.98  Aligned_cols=91  Identities=16%  Similarity=0.193  Sum_probs=69.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      ..-.|.+|.|.| .|.+|...++.++.+|++|+++++++.+...+. ..|... .      ++.+.+.     ..|+|+.
T Consensus       207 ~~L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~-~------sL~eal~-----~ADVVil  272 (436)
T 3h9u_A          207 VMIAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQV-L------LVEDVVE-----EAHIFVT  272 (436)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHTT-----TCSEEEE
T ss_pred             CcccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCee-c------CHHHHHh-----hCCEEEE
Confidence            334799999999 599999999999999999999999988776666 666532 1      2222222     4799998


Q ss_pred             Ccchh-HH-HHHHHccccCcEEEEEee
Q 027106          115 NVGAE-MQ-EAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       115 ~~g~~-~~-~~~~~~l~~~G~~v~~g~  139 (228)
                      +.+.. .+ ...++.|++++.++.+|.
T Consensus       273 t~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          273 TTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             CSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             CCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            87753 33 366788999999999874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.82  E-value=0.00013  Score=58.12  Aligned_cols=78  Identities=10%  Similarity=0.120  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCCc----eeeccChhhHHHHHHHHCCCCc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF-GC-YVVGSAGSKEKVTLLKDKLGFDD----AFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      .-.+.+|||+||+|.+|..+++.+... |. +|+++++++.+.+.+.+.+....    ..|..+.    +.+.+... ++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~   92 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GV   92 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cC
Confidence            346789999999999999999888877 98 99999999887766653553222    1233333    22333332 69


Q ss_pred             cEEEcCcch
Q 027106          110 DIYFDNVGA  118 (228)
Q Consensus       110 d~vld~~g~  118 (228)
                      |+||++++.
T Consensus        93 D~Vih~Aa~  101 (344)
T 2gn4_A           93 DICIHAAAL  101 (344)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.82  E-value=0.0003  Score=48.27  Aligned_cols=93  Identities=18%  Similarity=0.140  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ..++|+|.|+ |.+|..+++.+...|.+|+++++++++.+.++ +.|...+ .|..+. +   .+.+..-.++|+++.++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~-~---~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE-S---FYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH-H---HHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH-H---HHHhCCcccCCEEEEec
Confidence            3568999996 99999999999999999999999999988888 6665332 233332 2   23333223799999999


Q ss_pred             chh----HHHHHHHccccCcEEEEE
Q 027106          117 GAE----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       117 g~~----~~~~~~~~l~~~G~~v~~  137 (228)
                      +..    ......+.+. ..+++..
T Consensus        79 ~~~~~n~~~~~~a~~~~-~~~iia~  102 (141)
T 3llv_A           79 SDDEFNLKILKALRSVS-DVYAIVR  102 (141)
T ss_dssp             SCHHHHHHHHHHHHHHC-CCCEEEE
T ss_pred             CCHHHHHHHHHHHHHhC-CceEEEE
Confidence            863    2223334444 4555553

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.82  E-value=0.00013  Score=54.21  Aligned_cols=104  Identities=12%  Similarity=0.035  Sum_probs=69.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-  105 (228)
                      ...+..++.+||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .|....+..... +..+.+..+. 
T Consensus        52 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~  128 (223)
T 3duw_A           52 LLVQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIEN  128 (223)
T ss_dssp             HHHHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence            334557889999998  55788888888887  57999999999888877633   355331222112 3333222221 


Q ss_pred             --CCCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          106 --PDGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 --~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                        .+.||+|+-....    ..+..+.+.|++||.++.-.
T Consensus       129 ~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          129 EKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence              1369998843322    37888899999999887754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.82  E-value=2.8e-05  Score=58.84  Aligned_cols=95  Identities=15%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      ++|||+||+|++|..+++.+...|++|+++++++++.+    .   ....|..+.+.+...+.++ .+++|+|++++|..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~---~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----A---DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----c---cccCCcccHHHHHHHHHHc-CCCccEEEECCCCC
Confidence            47999999999999999888889999999998764321    0   1112222221333333333 24799999988731


Q ss_pred             -------------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106          120 -------------------MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       120 -------------------~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                                         .++.+.+.+..  .++++.+++...
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence                               11233334433  389999887543

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.81  E-value=8.9e-05  Score=55.26  Aligned_cols=104  Identities=12%  Similarity=0.067  Sum_probs=70.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...+..++++||-.|  .|.|..++.+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+..+..
T Consensus        63 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~  139 (229)
T 2avd_A           63 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  139 (229)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhcCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHh
Confidence            334567889999999  45888899999876  46999999999888887733   354221222222 33333332211


Q ss_pred             ----CCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          107 ----DGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ----~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                          +.||+|+.....    ..+..+.++|++||.++...
T Consensus       140 ~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          140 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence                479998754332    47888999999999998854

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.81  E-value=2.8e-05  Score=60.16  Aligned_cols=95  Identities=14%  Similarity=0.098  Sum_probs=62.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +|||+||+|.+|..+++.+... |.+|+++++++++...+. ..+... ..|..+. +   .+.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~-~---~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ-E---SMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH-H---HHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH-H---HHHHHHh-CCCEEEEeCCC
Confidence            5999999999999999887777 899999999887654433 333322 1344443 2   2333322 69999999874


Q ss_pred             --------hHHHHHHHccccC--cEEEEEeeec
Q 027106          119 --------EMQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       119 --------~~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                              .....+++.++..  ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                    1334445555543  4888888754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.81  E-value=0.00016  Score=51.46  Aligned_cols=102  Identities=21%  Similarity=0.237  Sum_probs=70.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCC-ceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDK---LGFD-DAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~-~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.++++||..|+ | .|..+..+++.. +.+|++++.+++..+.+++.   .|.. .+ ....  +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence            4457889999999993 4 588888988886 56999999999988888742   3443 33 2211  21111111 11


Q ss_pred             CCccEEEcCcch---hHHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFDNVGA---EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld~~g~---~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.||+|+.....   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            479999965543   378999999999999998653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.80  E-value=3.3e-05  Score=58.87  Aligned_cols=77  Identities=19%  Similarity=0.163  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHC-CCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYF-PDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~-~~~~d~vl  113 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.++.  .+ +++...   ..|..+.++....+.... .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            478999999999999999998888999999999754432  33 555421   234444423332222111 24799999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      +++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9998

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.80  E-value=0.00024  Score=55.73  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhC----C-CceeeccChhhHHHHHHHHCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS---KEKVTLLKDKLG----F-DDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~---~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      -.|+++||.|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    . ..+++.++.+++.+.+.     
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence            36889999996 9999999999999999 99999999   777766553433    2 12334433213333332     


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      .+|+|++|++.
T Consensus       226 ~aDiIINaTp~  236 (315)
T 3tnl_A          226 ESVIFTNATGV  236 (315)
T ss_dssp             TCSEEEECSST
T ss_pred             CCCEEEECccC
Confidence            48999999873

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.80  E-value=3.5e-05  Score=59.36  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      .++++||+||+|++|..++..+...|++|++++++.++.+.+.+   ..+...   ..|..+.+++...+.+...  +++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999998888889999999987654443331   234321   1344444233333333211  369


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999887

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=97.80  E-value=0.0001  Score=54.80  Aligned_cols=104  Identities=14%  Similarity=0.110  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ......++.+||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.....
T Consensus        58 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~  134 (225)
T 3tr6_A           58 LLVKLMQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIH  134 (225)
T ss_dssp             HHHHHHTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHT
T ss_pred             HHHHhhCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhh
Confidence            334456788999998  45688888888876  46999999999988887743   354321222112 33333333221


Q ss_pred             ----CCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          107 ----DGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ----~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                          +.||+|+-....    ..+..+.+.|++||.++...
T Consensus       135 ~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          135 AGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence                479998843332    36788889999999998754

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.80  E-value=2.8e-05  Score=58.58  Aligned_cols=99  Identities=9%  Similarity=-0.037  Sum_probs=67.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEE-
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIY-  112 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~v-  112 (228)
                      ..+|.+||-+|  .|.|..+..+++..+.+|++++.+++..+.++ +.....  -+..... +.......+..+.||.| 
T Consensus        58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~-~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEee-hHHhhcccccccCCceEE
Confidence            47899999999  56788888888877779999999999999998 433211  1111111 33333334444479987 


Q ss_pred             EcCcch-----------hHHHHHHHccccCcEEEEEe
Q 027106          113 FDNVGA-----------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       113 ld~~g~-----------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+...           ..+.++.++|+|||+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            454321           25677889999999998754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.80  E-value=2.7e-05  Score=59.60  Aligned_cols=81  Identities=12%  Similarity=0.216  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH--HhCCC-c--eeeccChhhHHHHHH---HHC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG---CYVVGSAGSKEKVTLLKD--KLGFD-D--AFNYKEETDLKAALK---RYF  105 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~~~~~~~~~~~~~--~~g~~-~--~~~~~~~~~~~~~~~---~~~  105 (228)
                      -++.+|||+||+|++|..+++.+...|   ++|++++++.++.+.+++  +.+.. .  ..|..+.+++...+.   +..
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            457899999999999999999888889   899999988764443331  11221 1  134444323333333   222


Q ss_pred             CC-CccEEEcCcc
Q 027106          106 PD-GIDIYFDNVG  117 (228)
Q Consensus       106 ~~-~~d~vld~~g  117 (228)
                      +. ++|++|+++|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 5999999887

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.80  E-value=6.7e-05  Score=57.54  Aligned_cols=81  Identities=17%  Similarity=0.263  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      ..++++||+||++++|.++++.+...|++|++++ ++.+..+...++   .+.. .  ..|..+.++..+.+.+...  +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999888999999988 555544433212   2321 1  2344544233333333221  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus       103 ~id~li~nAg  112 (269)
T 3gk3_A          103 KVDVLINNAG  112 (269)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.79  E-value=6.7e-05  Score=56.32  Aligned_cols=100  Identities=20%  Similarity=0.251  Sum_probs=69.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC-
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD-  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~-  107 (228)
                      ....++++++||..|+ | .|..+..+++..+.+|++++.+++..+.+++.   .|...+ ..... +..   ..+..+ 
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~~  157 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPKA  157 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGGC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCCC
Confidence            4567899999999993 4 78889999988778999999999888887743   344332 11111 211   111122 


Q ss_pred             CccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +||+|+.+..- .....+.+.|+++|+++..-
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            59999977654 35567889999999998854

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=97.79  E-value=0.00026  Score=53.61  Aligned_cols=103  Identities=14%  Similarity=0.095  Sum_probs=69.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC--
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF--  105 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~--  105 (228)
                      .....++++||-.|  ++.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+..+.  
T Consensus        74 l~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~  150 (247)
T 1sui_A           74 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD  150 (247)
T ss_dssp             HHHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHS
T ss_pred             HHHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhc
Confidence            34456778999998  67788888999886  57999999999888877732   354221222211 3333333221  


Q ss_pred             ---CCCccEEEcCcc----hhHHHHHHHccccCcEEEEEe
Q 027106          106 ---PDGIDIYFDNVG----AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ---~~~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~g  138 (228)
                         .+.||+||-...    ...+..+.++|++||.++.-.
T Consensus       151 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          151 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             cCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence               347999884332    137888999999999998743

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.78  E-value=5.2e-05  Score=65.11  Aligned_cols=80  Identities=21%  Similarity=0.268  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---------SKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---------~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      .|+++||+||++++|.+.++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+....+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999988889999999876         4443333322   344444556555434444444433


Q ss_pred             C--CCccEEEcCcc
Q 027106          106 P--DGIDIYFDNVG  117 (228)
Q Consensus       106 ~--~~~d~vld~~g  117 (228)
                      .  +++|++++++|
T Consensus        98 ~~~g~iDiLVnnAG  111 (613)
T 3oml_A           98 KAFGRVDILVNNAG  111 (613)
T ss_dssp             -------CEECCCC
T ss_pred             HHCCCCcEEEECCC
Confidence            3  37999999987

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.78  E-value=7.5e-05  Score=54.89  Aligned_cols=100  Identities=14%  Similarity=0.079  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....++++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.   .|...+-... . +..+...  ..+.
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~-~-d~~~~~~--~~~~  143 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRH-G-DGWQGWQ--ARAP  143 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-S-CGGGCCG--GGCC
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEE-C-CcccCCc--cCCC
Confidence            5577899999999994 4 58888888887 78999999999988888743   2443221111 1 1111111  1247


Q ss_pred             ccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+....- .....+.+.|+++|+++..-
T Consensus       144 ~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          144 FDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             EEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             ccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            9999976553 34456789999999998854

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.77  E-value=9.4e-05  Score=54.01  Aligned_cols=63  Identities=17%  Similarity=0.270  Sum_probs=46.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|++|..+++.+. .|++|++++++++           ....|..+.+.+.+.+.+.  +++|++++++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999998888 8999999997753           1123444442444444443  46899999887

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.77  E-value=7.6e-05  Score=56.97  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKL---GFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .++++||+||++++|.++++.+...|++|++++++ ++..+.+++.+   +.. .  ..|..+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999888899999998655 44444444222   211 1  2344544344433433322  36


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.76  E-value=0.0001  Score=55.87  Aligned_cols=101  Identities=12%  Similarity=0.077  Sum_probs=71.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCceeeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKL----GFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |...+ ..... ++.+.  .+.
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~  163 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE  163 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence            5577899999999994 4 488888999886  469999999999888887433    63332 11111 21111  112


Q ss_pred             CCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+.+|+|+...+.  ..+..+.+.|+++|+++.+.
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            2379999875543  58899999999999999875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.76  E-value=4.1e-05  Score=55.91  Aligned_cols=96  Identities=16%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++.+... ..+... ..|..+.+.+.+.+     .++|+|+++++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~-----~~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTV-----AGQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHH-----TTCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHH-----cCCCEEEECccC
Confidence            68999999999999999988888999999999876543211 111111 12333331222222     258999999874


Q ss_pred             h-----------HHHHHHHcccc--CcEEEEEeeec
Q 027106          119 E-----------MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus       119 ~-----------~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                      .           ....+++.+..  .++++.++...
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            2           13334444433  35888887654

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.76  E-value=0.00017  Score=55.58  Aligned_cols=101  Identities=18%  Similarity=0.263  Sum_probs=71.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.++++||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... ++.+.   +..
T Consensus       106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~  179 (277)
T 1o54_A          106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FDE  179 (277)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CSC
T ss_pred             HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---ccC
Confidence            5578899999999994 44 88888898885  46999999999988888733   244111211111 22111   222


Q ss_pred             CCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            479999876654  48889999999999999865

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.76  E-value=0.0005  Score=53.14  Aligned_cols=103  Identities=15%  Similarity=0.106  Sum_probs=64.8

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHH
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALK  102 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~  102 (228)
                      .+|.+...--.+++++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.    ..+...+.. ++.+.+.
T Consensus       116 ~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~  193 (283)
T 3jyo_A          116 RGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIA  193 (283)
T ss_dssp             HHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHH
T ss_pred             HHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHh
Confidence            34433333346889999996 9999999998888999 899999999988766545432    122222211 4444443


Q ss_pred             HHCCCCccEEEcCcchhHH-----HHHHHccccCcEEEEE
Q 027106          103 RYFPDGIDIYFDNVGAEMQ-----EAAIANMNTYGRVAVC  137 (228)
Q Consensus       103 ~~~~~~~d~vld~~g~~~~-----~~~~~~l~~~G~~v~~  137 (228)
                           .+|+|++|++....     ......++++..++.+
T Consensus       194 -----~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          194 -----AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             -----HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred             -----cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence                 38999999873211     1123456666555544

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.76  E-value=0.00014  Score=49.86  Aligned_cols=75  Identities=20%  Similarity=0.178  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ++++|+|+|+ |.+|..+++.+...|.+|+++++++++.+.++ +.+...+. +..+.    +.+.+..-+++|+++.++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE----NELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSEEEECCTTCH----HHHHTTTGGGCSEEEECC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCEEEEeCCCCH----HHHHhcCCCCCCEEEECC
Confidence            3568999997 99999999999999999999999888777665 44542221 22221    223322113699999999


Q ss_pred             ch
Q 027106          117 GA  118 (228)
Q Consensus       117 g~  118 (228)
                      +.
T Consensus        79 ~~   80 (144)
T 2hmt_A           79 GA   80 (144)
T ss_dssp             CS
T ss_pred             CC
Confidence            85

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.75  E-value=0.00015  Score=52.17  Aligned_cols=101  Identities=17%  Similarity=0.134  Sum_probs=67.4

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCc
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ...+++|++||-.|  .|.|..+..+++. +.+|++++.+++..+.+++.   .|...+-....  +.. .+....++.|
T Consensus        17 ~~~~~~~~~vLDiG--cG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~--~~~-~l~~~~~~~f   90 (185)
T 3mti_A           17 AEVLDDESIVVDAT--MGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILD--GHE-NLDHYVREPI   90 (185)
T ss_dssp             HTTCCTTCEEEESC--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEES--CGG-GGGGTCCSCE
T ss_pred             HHhCCCCCEEEEEc--CCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--cHH-HHHhhccCCc
Confidence            35678999999998  4558888888887 88999999999988887643   34332211111  111 1122233479


Q ss_pred             cEEEcCcch----------------hHHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNVGA----------------EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~g~----------------~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+|+.+.+.                ..+..+.+.|+|||+++.+..
T Consensus        91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            998755311                255788899999999988753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.75  E-value=0.00016  Score=59.85  Aligned_cols=80  Identities=18%  Similarity=0.263  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCc-eeeccChhhHHHHH---HHHCCCCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDD-AFNYKEETDLKAAL---KRYFPDGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~-~~~~~~~~~~~~~~---~~~~~~~~d~  111 (228)
                      +|+++||+||+|++|...++.+...|++|++++++..  ..+...++.+... ..|..+.++....+   .+..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5789999999999999999888888999999987543  3333332555432 23444432333333   3333335999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus       292 lV~nAG  297 (454)
T 3u0b_A          292 LVNNAG  297 (454)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999887

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.75  E-value=7.7e-05  Score=56.77  Aligned_cols=101  Identities=8%  Similarity=0.034  Sum_probs=71.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--c--eeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD--D--AFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....++++.+||-.|  .|.|..+..+++..+++|++++.+++..+.++ +....  .  ++..+-. +.     ....+
T Consensus        49 ~~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~d~~-~~-----~~~~~  119 (266)
T 3ujc_A           49 SDIELNENSKVLDIG--SGLGGGCMYINEKYGAHTHGIDICSNIVNMAN-ERVSGNNKIIFEANDIL-TK-----EFPEN  119 (266)
T ss_dssp             TTCCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HTCCSCTTEEEEECCTT-TC-----CCCTT
T ss_pred             HhcCCCCCCEEEEEC--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhhcCCCeEEEECccc-cC-----CCCCC
Confidence            556788999999999  45788888898877899999999999999998 44321  1  1111111 10     11124


Q ss_pred             CccEEEcCcc-------h--hHHHHHHHccccCcEEEEEeeec
Q 027106          108 GIDIYFDNVG-------A--EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g-------~--~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .||+|+....       .  ..+..+.+.|+|||+++......
T Consensus       120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  162 (266)
T 3ujc_A          120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA  162 (266)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence            7999986432       1  26788889999999999976543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.74  E-value=0.00022  Score=54.86  Aligned_cols=95  Identities=9%  Similarity=0.066  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -+|++++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+.++    +.+   +++|++++++
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~---~~~DivVn~t  188 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEG---HEFDLIINAT  188 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTT---CCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hcc---CCCCEEEECC
Confidence            36889999997 999999999999999999999999988766654665311111111101    111   4699999999


Q ss_pred             chhHHHH----HHHccccCcEEEEEee
Q 027106          117 GAEMQEA----AIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~~~~~----~~~~l~~~G~~v~~g~  139 (228)
                      +......    -...++++..++.+..
T Consensus       189 ~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          189 SSGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             SCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            8543210    1133555556666543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.74  E-value=0.00027  Score=51.21  Aligned_cols=96  Identities=11%  Similarity=0.097  Sum_probs=63.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHhCCCcee---eccChhhHHHH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG----------CYVVGSAGSKEKVTLLKDKLGFDDAF---NYKEETDLKAA  100 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g----------~~V~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~  100 (228)
                      ..++++++||..|+ |+ |..+..+++..+          .+|++++.++..      .......+   |..+. .....
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~   88 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQR   88 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHH
Confidence            44789999999994 65 888999999876          789999987632      01111122   22222 34444


Q ss_pred             HHHHCCC-CccEEEc-----Ccch-------------hHHHHHHHccccCcEEEEEe
Q 027106          101 LKRYFPD-GIDIYFD-----NVGA-------------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       101 ~~~~~~~-~~d~vld-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +....++ .||+|+.     +.+.             ..+..+.+.|+|+|+++...
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            4444544 7999994     3331             35667889999999999864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.73  E-value=2.8e-05  Score=57.90  Aligned_cols=95  Identities=18%  Similarity=0.157  Sum_probs=60.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.  -+... ..|..+.+++.+.+.     ++|+||+++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcC
Confidence            58999999999999999999999999999999876643211  11111 123333322332222     58999999874


Q ss_pred             h------------HHHHHHHccccC--cEEEEEeeec
Q 027106          119 E------------MQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       119 ~------------~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                      .            ....+++.++..  ++++.+++..
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            2            223344445443  4888887643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.73  E-value=1.4e-05  Score=60.97  Aligned_cols=74  Identities=16%  Similarity=0.168  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHC--CCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYF--PDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~--~~~~d~vld  114 (228)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+    +  .. ...|..+.+++...+.+..  .+++|++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----G--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----T--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----c--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999998889999999998765432    1  11 1234444423333333221  246999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        94 nAg   96 (253)
T 2nm0_A           94 NAG   96 (253)
T ss_dssp             ECS
T ss_pred             CCC
Confidence            876

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.72  E-value=7e-05  Score=55.49  Aligned_cols=94  Identities=15%  Similarity=0.193  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+   .+... ..|..+   ..+.+.+... ++|+||+++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d---~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDW---TPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTS---CHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccC---CHHHHHHHHc-CCCEEEECCcCC
Confidence            699999999999999999988999999999987654321   11111 123332   0223333332 699999998842


Q ss_pred             ----------HHHHHHHccccC--cEEEEEeeec
Q 027106          120 ----------MQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       120 ----------~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                                ....+++.++..  ++++.+++..
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                      133344444433  5899888754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.72  E-value=0.00012  Score=55.09  Aligned_cols=73  Identities=21%  Similarity=0.138  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+.+|||+||+|.+|..+++.+...  |.+|+++++++++.+.+.  .+... ..|..+.+++.+.+    . ++|+||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~----~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF----Q-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH----T-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHH----c-CCCEEEE
Confidence            4679999999999999999888888  789999999877654321  12221 12444332333322    2 5899999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      +++
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            876

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.71  E-value=1.2e-05  Score=61.55  Aligned_cols=76  Identities=16%  Similarity=0.133  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+    ..... ...|..+.++....+.+...  +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5789999999999999999998889999999998754321    11111 12344444233333332221  37999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.71  E-value=0.0001  Score=53.90  Aligned_cols=74  Identities=20%  Similarity=0.286  Sum_probs=51.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .++||+||+|++|..+++.+...  +|+++++++++.+.+.++++.. ...|..+.+++...+.+  .+++|++++++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            37999999999999888776655  9999999988877666445431 11344444244444443  247999999887

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.71  E-value=6.4e-05  Score=57.14  Aligned_cols=81  Identities=23%  Similarity=0.257  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHH----HHHHHHhCCCc---eeeccChhhHHHHHHHHC--
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKV----TLLKDKLGFDD---AFNYKEETDLKAALKRYF--  105 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~----~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--  105 (228)
                      ..++++|||+||++++|.++++.+...|++|++++ ++.++.    +.++ +.+...   ..|..+.++....+.+..  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            45788999999999999999998888999999887 433332    2223 344322   134444323333333321  


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      .+++|++++++|
T Consensus        89 ~g~id~lv~~Ag  100 (256)
T 3ezl_A           89 VGEIDVLVNNAG  100 (256)
T ss_dssp             TCCEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            137999999887

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.71  E-value=0.00016  Score=53.28  Aligned_cols=101  Identities=20%  Similarity=0.217  Sum_probs=69.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.++++||..|+ | .|..+..+++..|  .+|++++.+++..+.+++.   .|...+- .... +....+.  ..
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~-d~~~~~~--~~  144 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVI-VIVG-DGTLGYE--PL  144 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEE-EEES-CGGGCCG--GG
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEEC-CcccCCC--CC
Confidence            5567899999999994 4 6888999999886  7999999999988887743   3443321 1111 2111111  12


Q ss_pred             CCccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.||+|+.+..- .....+.+.|+++|+++..-
T Consensus       145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            379999977654 34468889999999998864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.70  E-value=9.5e-05  Score=56.61  Aligned_cols=80  Identities=14%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC-c--eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKDK---LGFD-D--AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      .+++|||+||++++|..+++.+...|++|++.. ++.++.+...++   .+.. .  ..|..+.++..+.+.+...  ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467999999999999999999889999987654 565555443322   2321 1  2344444233333332221  37


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       105 id~li~nAg  113 (267)
T 4iiu_A          105 WYGVVSNAG  113 (267)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEECCC
Confidence            999999887

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.69  E-value=1.1e-05  Score=61.86  Aligned_cols=75  Identities=17%  Similarity=0.180  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      .|+++||+||++++|.++++.+...|++|++++++.+..+... .    ...|..+.......+.+...  +++|+++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~----~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-H----LPGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-E----CCCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-c----cCcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999988889999999998755432111 1    11233333222222222211  369999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus       102 Ag  103 (266)
T 3uxy_A          102 AG  103 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.69  E-value=0.00077  Score=53.46  Aligned_cols=74  Identities=12%  Similarity=0.161  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHh-------CCCc-eeeccChhhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVTLLKDKL-------GFDD-AFNYKEETDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~~~~~-------g~~~-~~~~~~~~~~~~~~~~~~  105 (228)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.    ...+.+. ..       +... ..|..+.    +.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHh
Confidence            467999999999999999999988999999999843    3333333 21       2211 1233333    2233333


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                      . ++|+||++++
T Consensus        99 ~-~~d~Vih~A~  109 (351)
T 3ruf_A           99 K-GVDHVLHQAA  109 (351)
T ss_dssp             T-TCSEEEECCC
T ss_pred             c-CCCEEEECCc
Confidence            2 6999999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.68  E-value=8.2e-05  Score=63.71  Aligned_cols=104  Identities=20%  Similarity=0.270  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHH---HhCCCceeeccChhh---HHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK---------EKVTLLKD---KLGFDDAFNYKEETD---LKAALK  102 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~---------~~~~~~~~---~~g~~~~~~~~~~~~---~~~~~~  102 (228)
                      .|++++|+||++|+|.+.++.+...|++|++++++.         ++.+.+.+   ..|...+.|..+..+   +.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999987643         33333221   234333445444322   333333


Q ss_pred             HHCCCCccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          103 RYFPDGIDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       103 ~~~~~~~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +.. +++|++++++|..           .+               +.+++.|+  .+|++|.+++..+
T Consensus        87 ~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            222 4699999998720           12               33455664  3599999987543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.67  E-value=0.00027  Score=54.36  Aligned_cols=101  Identities=18%  Similarity=0.159  Sum_probs=70.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----C--CCceeeccChhhHHHHHHH
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKL----G--FDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~~~~  103 (228)
                      ....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |  ...+ ..... ++.+.  .
T Consensus        93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~--~  166 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS--E  166 (280)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC--C
T ss_pred             HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc--C
Confidence            5577899999999993 4 788888998875  469999999999888887432    4  2222 11111 21111  1


Q ss_pred             HCCCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ...+.+|+|+.....  ..+..+.+.|+++|+++.+.
T Consensus       167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            112379999875543  58899999999999999875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.67  E-value=0.00034  Score=55.27  Aligned_cols=76  Identities=17%  Similarity=0.297  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHhCC-Cc----eeeccChhhHHHHHHHHCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV--TLLKDKLGF-DD----AFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~~g~-~~----~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++++++.  +.++ .++. ..    ..|..+...+.+.+...   ++|
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d   77 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPD   77 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCC
Confidence            367999999999999999988888899999999876532  2333 3321 11    12444432333333332   589


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +||++++
T Consensus        78 ~vih~A~   84 (345)
T 2z1m_A           78 EVYNLAA   84 (345)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.67  E-value=7.2e-05  Score=57.25  Aligned_cols=99  Identities=18%  Similarity=0.233  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      .|+++||+||+|++|.++++.+...|++|+++++++++      ..... ...|..+.+++...+.+...  +++|++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999988899999999987543      01111 12344444233333333221  36999999


Q ss_pred             Ccchh-----------H---------------HHHHHHcccc--CcEEEEEeeecc
Q 027106          115 NVGAE-----------M---------------QEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       115 ~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ++|..           .               .+.+++.+..  .|++|.+++...
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh
Confidence            88721           1               2334455533  589999987654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.66  E-value=0.00049  Score=53.06  Aligned_cols=103  Identities=11%  Similarity=0.043  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +....++.++.+||-.|  .|.|..+..+++..|++|++++.+++..+.+++.+   |...-+..... ++    .++. 
T Consensus        56 ~~~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-
T ss_pred             HHHHcCCCCcCEEEEEC--CcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-
Confidence            33556788999999999  45588888899878999999999999888887433   32211111111 22    1122 


Q ss_pred             CCccEEEcC-----cc----hhHHHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDN-----VG----AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~-----~g----~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.||+|+..     .+    ...+..+.++|+|||+++.....
T Consensus       128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  170 (287)
T 1kpg_A          128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT  170 (287)
T ss_dssp             CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            579999754     22    13788889999999999986643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.65  E-value=0.00027  Score=57.66  Aligned_cols=84  Identities=15%  Similarity=0.060  Sum_probs=53.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH---------------HHHH-HHHHHhCCCc---eeecc
Q 027106           34 GKPKKGEKVFVSAASGSVGHL--VGQYAKLFGCYVVGSAGSK---------------EKVT-LLKDKLGFDD---AFNYK   92 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~--a~~~a~~~g~~V~~~~~~~---------------~~~~-~~~~~~g~~~---~~~~~   92 (228)
                      ..+..|+++||+||++|+|.+  .+......|++|++++++.               +..+ .++ +.|...   ..|..
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCC
Confidence            456789999999999999998  5554445599999988743               2222 233 556432   23444


Q ss_pred             ChhhHHHHHHHHC--CCCccEEEcCcch
Q 027106           93 EETDLKAALKRYF--PDGIDIYFDNVGA  118 (228)
Q Consensus        93 ~~~~~~~~~~~~~--~~~~d~vld~~g~  118 (228)
                      +.++....+.+..  .+++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            4423333333332  2479999998874

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.65  E-value=0.00024  Score=51.57  Aligned_cols=102  Identities=19%  Similarity=0.180  Sum_probs=67.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ..++++++||-.|  .|.|..+..+++..+  .+|++++.+++..+.+++.   .|...-+..... ++. .+....++.
T Consensus        18 ~~~~~~~~vLDlG--cG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~-~~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDAT--CGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQ-NMDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESC--CTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGG-GGGGTCCSC
T ss_pred             hcCCCCCEEEEcC--CCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHH-HHhhhccCC
Confidence            4578999999998  344888888888864  5999999999988887743   233111111111 211 111122347


Q ss_pred             ccEEEcCcch----------------hHHHHHHHccccCcEEEEEee
Q 027106          109 IDIYFDNVGA----------------EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       109 ~d~vld~~g~----------------~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ||+|+...+-                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999865421                478889999999999988753

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=97.64  E-value=0.00012  Score=55.39  Aligned_cols=102  Identities=15%  Similarity=0.150  Sum_probs=69.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....+.++.+||-.|  .|.|..+..+++..|.+|++++.++...+.+++.   .|...-+..... ++.+.   ..++.
T Consensus        30 ~~~~~~~~~~VLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~~~  103 (256)
T 1nkv_A           30 RVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY---VANEK  103 (256)
T ss_dssp             HHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC---CCSSC
T ss_pred             HhcCCCCCCEEEEEC--CCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-ChHhC---CcCCC
Confidence            556789999999999  3448888899988899999999999888877633   343211111111 11100   01247


Q ss_pred             ccEEEcCcc-------hhHHHHHHHccccCcEEEEEee
Q 027106          109 IDIYFDNVG-------AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       109 ~d~vld~~g-------~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ||+|+....       ...+..+.++|+|||+++....
T Consensus       104 fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  141 (256)
T 1nkv_A          104 CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  141 (256)
T ss_dssp             EEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             CCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence            999985211       1368888999999999998653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.64  E-value=0.00022  Score=57.56  Aligned_cols=83  Identities=14%  Similarity=0.126  Sum_probs=53.8

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------H-HHHHHHhCCCc---eeecc
Q 027106           34 GKP-KKGEKVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEK---------------V-TLLKDKLGFDD---AFNYK   92 (228)
Q Consensus        34 ~~~-~~g~~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~---------------~-~~~~~~~g~~~---~~~~~   92 (228)
                      ..+ ..|+++||+||++|+|.+.++.+.. .|++|++++++.+.               . +.++ +.|...   ..|..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence            455 5678899999999999998877777 89999988764322               1 2334 556432   13444


Q ss_pred             ChhhHHHH---HHHHCCCCccEEEcCcch
Q 027106           93 EETDLKAA---LKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        93 ~~~~~~~~---~~~~~~~~~d~vld~~g~  118 (228)
                      +.+.....   +.+.. |++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            44233333   33322 479999999874

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.63  E-value=0.00027  Score=51.99  Aligned_cols=99  Identities=18%  Similarity=0.097  Sum_probs=68.6

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ...+.++.+||-.|  .|.|..+..+++. |.+|++++.++...+.++ +.+...+--.. . ++.+.   ...+.||+|
T Consensus        41 l~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~-~-d~~~~---~~~~~~D~v  111 (218)
T 3ou2_A           41 LRAGNIRGDVLELA--SGTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQ-Q-DLFDW---TPDRQWDAV  111 (218)
T ss_dssp             HTTTTSCSEEEEES--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEE-C-CTTSC---CCSSCEEEE
T ss_pred             HhcCCCCCeEEEEC--CCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEe-c-ccccC---CCCCceeEE
Confidence            34578889999999  3457777777777 889999999999999998 66643321111 1 11111   123489999


Q ss_pred             EcCcc---------hhHHHHHHHccccCcEEEEEeee
Q 027106          113 FDNVG---------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       113 ld~~g---------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +....         ...+..+.+.|+++|+++.....
T Consensus       112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            86432         23677888999999999987653

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.62  E-value=8.6e-05  Score=58.73  Aligned_cols=77  Identities=13%  Similarity=0.108  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCCC-ce--eeccChhhHHHHHHHHCCCCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV----TLLKDKLGFD-DA--FNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~----~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++.    +.+.+..+.. .+  .|..+.+.+.+.+.+   +++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            467999999999999999999988999999998754432    2222122321 11  244443233333332   3699


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +|+++++
T Consensus        81 ~vih~A~   87 (341)
T 3enk_A           81 AAIHFAA   87 (341)
T ss_dssp             EEEECCC
T ss_pred             EEEECcc
Confidence            9999987

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.62  E-value=0.00011  Score=58.32  Aligned_cols=104  Identities=18%  Similarity=0.163  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC--------------CCceeeccChh
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLG--------------FDDAFNYKEET   95 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~   95 (228)
                      ....+.+|++||-.|+ |. |..++.+++..|  .+|++++.++...+.+++.+.              ...+ ..... 
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v-~~~~~-  174 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIHK-  174 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEES-
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce-EEEEC-
Confidence            4457899999999993 44 888888888776  699999999998888874221              1111 11111 


Q ss_pred             hHHHHHHHHCCCCccEEEcCcch--hHHHHHHHccccCcEEEEEee
Q 027106           96 DLKAALKRYFPDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        96 ~~~~~~~~~~~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +..+....+..+.||+|+.....  ..+..+.+.|+++|+++....
T Consensus       175 d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            11111111122369998865543  378899999999999997653

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.61  E-value=0.00055  Score=53.33  Aligned_cols=94  Identities=13%  Similarity=0.053  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--ceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD--DAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      -++.+|+|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++..  .+++..   +    +.+.. .++|+|+
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~---~----~~~~~-~~aDivI  209 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLA---E----AETRL-AEYDIII  209 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHH---H----HHHTG-GGCSEEE
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHH---H----HHhhh-ccCCEEE
Confidence            36889999996 9999999999999998 9999999998877666466652  222111   2    22111 2589999


Q ss_pred             cCcchhHH------HHHHHccccCcEEEEEee
Q 027106          114 DNVGAEMQ------EAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       114 d~~g~~~~------~~~~~~l~~~G~~v~~g~  139 (228)
                      +|++....      ......++++..++.+..
T Consensus       210 n~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          210 NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             ECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99985421      111245667777777654

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=97.60  E-value=0.00032  Score=53.93  Aligned_cols=100  Identities=7%  Similarity=-0.001  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCceeeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKL----GFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ....++++++||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.+    |...+- .... ++.+   ...
T Consensus       104 ~~~~~~~~~~VLD~G--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~-~~~~-d~~~---~~~  176 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRS-DIAD---FIS  176 (275)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECS-CTTT---CCC
T ss_pred             HHcCCCCcCEEEEec--CCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEE-EEEC-chhc---cCc
Confidence            556789999999998  34677888888874  579999999999888887433    533321 1111 2211   112


Q ss_pred             CCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ++.||+|+.....  ..+..+.+.|+++|+++...
T Consensus       177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            2379999876553  48899999999999999875

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=97.60  E-value=0.00018  Score=56.40  Aligned_cols=105  Identities=11%  Similarity=0.082  Sum_probs=70.5

Q ss_pred             HhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      .... ++++++||-.|  .|.|..+..+++..|++|++++.+++..+.+++.   .|...-+..... ++.+ + .+..+
T Consensus       110 ~~l~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~~~  184 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAG--CGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-NMLD-T-PFDKG  184 (312)
T ss_dssp             TTSCCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCCTT
T ss_pred             HHhccCCCCCEEEEec--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-Chhc-C-CCCCC
Confidence            3344 78999999999  4568888888888799999999999988887732   343211111111 1110 0 01224


Q ss_pred             CccEEEcCcc------hhHHHHHHHccccCcEEEEEeeec
Q 027106          108 GIDIYFDNVG------AEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g------~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .||+|+....      ...+..+.++|+|||+++......
T Consensus       185 ~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          185 AVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             CEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            7999975322      248888999999999999877544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.59  E-value=8.7e-05  Score=56.03  Aligned_cols=78  Identities=13%  Similarity=0.111  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH--HHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL--KAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~--~~~d~vl  113 (228)
                      .|+++||+||+|++|.++++.+.. |.+|+++++++++.+.+. +......+.. +..+.  ...+.+...  +++|+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES-DIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC-CHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec-ccchHHHHHHHHHHHHhcCCCCEEE
Confidence            468999999999999998877655 899999999998887776 4322111111 11011  011111111  3799999


Q ss_pred             cCcch
Q 027106          114 DNVGA  118 (228)
Q Consensus       114 d~~g~  118 (228)
                      +++|.
T Consensus        81 ~~Ag~   85 (245)
T 3e9n_A           81 HAAAV   85 (245)
T ss_dssp             ECC--
T ss_pred             ECCCc
Confidence            99874

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.59  E-value=0.00044  Score=52.55  Aligned_cols=96  Identities=22%  Similarity=0.240  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ++++++||-.|+ |. |..++.+++ .|++|++++.++...+.+++.   .+..  +..... +..+.   +..+.||+|
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence            678999999994 43 777777666 577999999999888877732   3433  222112 33322   223479999


Q ss_pred             EcCcch----hHHHHHHHccccCcEEEEEeee
Q 027106          113 FDNVGA----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       113 ld~~g~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.+...    ..+..+.+.|+++|+++..+..
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence            865432    3677888999999999998754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.58  E-value=0.00055  Score=57.15  Aligned_cols=77  Identities=22%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------HHHHHHHHhCCCc---eeeccChhhHHHHHHHHCCC-
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE-------KVTLLKDKLGFDD---AFNYKEETDLKAALKRYFPD-  107 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~-------~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~-  107 (228)
                      .++||+||+|++|...++.+...|+ +|+.+.++..       -.+.++ ..|...   ..|..+.+.+...+.+.... 
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            8999999999999999988888898 8888887532       112233 456422   23455543445555544333 


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|+||+++|
T Consensus       319 ~ld~vVh~AG  328 (496)
T 3mje_A          319 PLTAVFHSAG  328 (496)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            7999999887

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=97.57  E-value=0.0007  Score=48.53  Aligned_cols=100  Identities=20%  Similarity=0.224  Sum_probs=69.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC-CceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGF-DDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+.++++||-.|+ |. |..+..+++.. .+|++++.+++..+.+++.   .+. .. +..... +..+.+..  .+
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~~~-d~~~~~~~--~~   99 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDN-VTLMEG-DAPEALCK--IP   99 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTT-EEEEES-CHHHHHTT--SC
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcc-eEEEec-CHHHhccc--CC
Confidence            4567889999999994 44 88888887765 8999999999988887742   344 22 222222 33332221  13


Q ss_pred             CccEEEcCcc----hhHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVG----AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g----~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|+|+....    ...+..+.+.|+++|+++...
T Consensus       100 ~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            7999986554    247788889999999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.57  E-value=0.00038  Score=55.57  Aligned_cols=37  Identities=14%  Similarity=0.122  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKL--FGCYVVGSAGSKE   74 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~--~g~~V~~~~~~~~   74 (228)
                      .+.+|||+||+|.+|..+++.+..  .|.+|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            568999999999999999988888  8999999997543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.56  E-value=4.6e-05  Score=60.30  Aligned_cols=79  Identities=13%  Similarity=0.130  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH---HH-HHHHHHhC------CC-c--eeeccChhhHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE---KV-TLLKDKLG------FD-D--AFNYKEETDLKAALKRY  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~---~~-~~~~~~~g------~~-~--~~~~~~~~~~~~~~~~~  104 (228)
                      +|++|||+||+|++|.++++.+...|++|+.+.++.+   +. +.++ ..+      .. .  ..|..+.+++...+.+.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            3678999999999999999998889998777654322   21 2222 221      11 1  23555543444455544


Q ss_pred             CCCCccEEEcCcc
Q 027106          105 FPDGIDIYFDNVG  117 (228)
Q Consensus       105 ~~~~~d~vld~~g  117 (228)
                      ..+++|++++++|
T Consensus        80 ~~g~iD~lVnnAG   92 (327)
T 1jtv_A           80 TEGRVDVLVCNAG   92 (327)
T ss_dssp             TTSCCSEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence            3357999999886

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.56  E-value=0.0019  Score=43.81  Aligned_cols=93  Identities=13%  Similarity=0.092  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +.+|+|+|+ |.+|...++.+...|.+|+++++++++.+.+.+.+|...+. +..+. +   .+.+..-.++|+|+.+++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~-~---~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI-K---TLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH-H---HHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH-H---HHHHcCcccCCEEEEeeC
Confidence            458999996 99999999988888999999999998887776345653221 22222 1   222221236899999988


Q ss_pred             hhH----HHHHHHccccCcEEEEE
Q 027106          118 AEM----QEAAIANMNTYGRVAVC  137 (228)
Q Consensus       118 ~~~----~~~~~~~l~~~G~~v~~  137 (228)
                      .+.    +....+.+.+ ++++..
T Consensus        79 ~~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           79 KEEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             CHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             CchHHHHHHHHHHHcCC-CEEEEE
Confidence            642    2233444444 355553

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.56  E-value=0.0019  Score=44.92  Aligned_cols=95  Identities=11%  Similarity=0.063  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh--CCCcee-eccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKDKL--GFDDAF-NYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +.++|+|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+  |...+. |..+.    +.+.+..-.+.|+|+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDS----SVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSH----HHHHHHTTTTCSEEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCH----HHHHHcChhhCCEEE
Confidence            3568999995 999999999999999999999986 56665555233  332221 22222    233333223689999


Q ss_pred             cCcchh----HHHHHHHccccCcEEEEE
Q 027106          114 DNVGAE----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       114 d~~g~~----~~~~~~~~l~~~G~~v~~  137 (228)
                      -+++.+    ......+.+.+..+++..
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           77 ALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            998864    333334455555676664

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.55  E-value=0.00022  Score=56.23  Aligned_cols=101  Identities=19%  Similarity=0.126  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CC--Cce--eeccChhhHHHHHHHHCCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL----GF--DDA--FNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~--~~~--~~~~~~~~~~~~~~~~~~~  107 (228)
                      ..++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.  ..+  .|..+. +   .+.+.. .
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~-~   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVI-K   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTT-T
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHH-c
Confidence            356789999999999999999888888999999999887765554222    21  111  233332 1   122221 2


Q ss_pred             CccEEEcCcchh---------------HHHHHHHccc--c-CcEEEEEeeec
Q 027106          108 GIDIYFDNVGAE---------------MQEAAIANMN--T-YGRVAVCGVIS  141 (228)
Q Consensus       108 ~~d~vld~~g~~---------------~~~~~~~~l~--~-~G~~v~~g~~~  141 (228)
                      ++|+||++++..               ....+++.+.  . .+++|.+++..
T Consensus        83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            689999988631               1122334433  2 37899888753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.54  E-value=0.00011  Score=56.53  Aligned_cols=95  Identities=18%  Similarity=0.232  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+...+ .|..+. +   .+.+... ++|+||++++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE-A---ALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH-H---HHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH-H---HHHHHHh-CCCEEEEeCC
Confidence            4899999999999999888877  889999998877655554 4444221 244433 2   2333322 5899999887


Q ss_pred             hh------HHHHHHHcccc-C-cEEEEEeeec
Q 027106          118 AE------MQEAAIANMNT-Y-GRVAVCGVIS  141 (228)
Q Consensus       118 ~~------~~~~~~~~l~~-~-G~~v~~g~~~  141 (228)
                      ..      ....+++.+.. + ++++.+++..
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41      23344444433 2 5888887654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.53  E-value=0.00042  Score=58.36  Aligned_cols=82  Identities=12%  Similarity=0.018  Sum_probs=54.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHHhCCCc---eeecc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGS-AGSK-------------EK----VTLLKDKLGFDD---AFNYK   92 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~-~~~~-------------~~----~~~~~~~~g~~~---~~~~~   92 (228)
                      .++++.++||+||+|++|..+++.+...|++ |+.+ .++.             ++    .+.++ +.|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3578899999999999999999888888985 6666 6662             22    22333 456422   23555


Q ss_pred             ChhhHHHHHHHHCC-CCccEEEcCcc
Q 027106           93 EETDLKAALKRYFP-DGIDIYFDNVG  117 (228)
Q Consensus        93 ~~~~~~~~~~~~~~-~~~d~vld~~g  117 (228)
                      +.+.....+.+... +++|+||+++|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            54344444544432 37999999987

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=97.53  E-value=0.00054  Score=55.51  Aligned_cols=115  Identities=17%  Similarity=0.210  Sum_probs=75.7

Q ss_pred             cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HhCC--
Q 027106           19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD----------KLGF--   85 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----------~~g~--   85 (228)
                      +.......+..+....++++|++||=.|  .|.|..++++|+..|+ +|++++.++...+.+++          .+|.  
T Consensus       154 YGEt~~~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~  231 (438)
T 3uwp_A          154 YGETSFDLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH  231 (438)
T ss_dssp             GGGTHHHHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred             cCCCCHHHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            3344444555555778899999999998  6788899999998898 59999999876655542          2343  


Q ss_pred             Cce--e--eccChhhHHHHHHHHCCCCccEEEcCc---ch---hHHHHHHHccccCcEEEEEeeec
Q 027106           86 DDA--F--NYKEETDLKAALKRYFPDGIDIYFDNV---GA---EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        86 ~~~--~--~~~~~~~~~~~~~~~~~~~~d~vld~~---g~---~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ..+  +  |..+. .+.+.+     ..+|+|+-..   ..   ..+...++.|+|||++|+.....
T Consensus       232 ~rVefi~GD~~~l-p~~d~~-----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~  291 (438)
T 3uwp_A          232 AEYTLERGDFLSE-EWRERI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFA  291 (438)
T ss_dssp             CEEEEEECCTTSH-HHHHHH-----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred             CCeEEEECcccCC-cccccc-----CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence            222  1  11111 222111     1489987422   22   26677889999999999976543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.52  E-value=0.0005  Score=57.32  Aligned_cols=81  Identities=17%  Similarity=0.205  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHhCCCc---eeeccChhhHHHHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK---V----TLLKDKLGFDD---AFNYKEETDLKAALKRY  104 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~---~----~~~~~~~g~~~---~~~~~~~~~~~~~~~~~  104 (228)
                      ++++.++||+||+|++|..+++.+...|+ +|+.+.++...   .    +.++ ..|...   ..|..+.+.+...+.+.
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            56789999999999999999988888898 59999887641   1    2233 445421   23445543444445444


Q ss_pred             CC-CCccEEEcCcc
Q 027106          105 FP-DGIDIYFDNVG  117 (228)
Q Consensus       105 ~~-~~~d~vld~~g  117 (228)
                      .. +++|+||+++|
T Consensus       302 ~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          302 GDDVPLSAVFHAAA  315 (486)
T ss_dssp             CTTSCEEEEEECCC
T ss_pred             HhcCCCcEEEECCc
Confidence            22 37899999987

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.51  E-value=3.1e-05  Score=58.21  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+.+|||+||+|++|..+++.+...|+  +|+++++++++.+... .-+... ..|..+.++    +.+... ++|+|++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~----~~~~~~-~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDD----YASAFQ-GHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGG----GGGGGS-SCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHH----HHHHhc-CCCEEEE
Confidence            367999999999999999998888999  9999998765433221 112211 123332212    222222 6999999


Q ss_pred             Ccchh---------------HHHHHHHcccc--CcEEEEEeeecc
Q 027106          115 NVGAE---------------MQEAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       115 ~~g~~---------------~~~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ++|..               ....+++.+.+  .++++.+++...
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            98742               11223334433  368999887543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.51  E-value=0.00067  Score=56.90  Aligned_cols=78  Identities=17%  Similarity=0.215  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHhCCCc---eeeccChhhHHHHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK---V----TLLKDKLGFDD---AFNYKEETDLKAALKRY  104 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~---~----~~~~~~~g~~~---~~~~~~~~~~~~~~~~~  104 (228)
                      ++++.+|||+||+|++|..+++.+...|+ +|+.+.++...   .    +.++ ..|...   ..|..+.+.+...+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            46789999999999999999988888898 68888887531   1    2222 345321   1355554234444443 


Q ss_pred             CCCCccEEEcCcc
Q 027106          105 FPDGIDIYFDNVG  117 (228)
Q Consensus       105 ~~~~~d~vld~~g  117 (228)
                        +++|+||+++|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              56999999987

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=97.51  E-value=0.00059  Score=51.18  Aligned_cols=95  Identities=12%  Similarity=0.047  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .++++.+||-.|  .|.|..+..+++. |++|++++.+++..+.++ +.  ..++   .. +..+....+..+.||+|+.
T Consensus        38 ~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~--~~~~---~~-d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIG--CGRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK--FNVV---KS-DAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEET--CTTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT--SEEE---CS-CHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEe--CCCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh--ccee---ec-cHHHHhhhcCCCCeeEEEE
Confidence            457889999999  4556666666665 889999999999988888 43  1222   12 3333333333458999985


Q ss_pred             Cc-----c----hhHHHHHHHccccCcEEEEEee
Q 027106          115 NV-----G----AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       115 ~~-----g----~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..     .    ...+..+.+.|+|||+++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            32     2    1377888899999999988543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.51  E-value=0.00024  Score=56.44  Aligned_cols=95  Identities=24%  Similarity=0.225  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HhCCCc-eeeccChhhHHHHHHHHCCCCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVTLLKD--KLGFDD-AFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~~~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ..+|||+||+|.+|..+++.+...|.+|+++++++    ++.+.+.+  ..++.. ..|..+.+.+.+.+.+   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            46899999999999999998888899999999865    45443331  234432 1344443244444432   26999


Q ss_pred             EEcCcchh---HHHHHHHccccCc---EEEE
Q 027106          112 YFDNVGAE---MQEAAIANMNTYG---RVAV  136 (228)
Q Consensus       112 vld~~g~~---~~~~~~~~l~~~G---~~v~  136 (228)
                      ||.+++..   ....+++.++..|   +++.
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            99999852   3344455554434   5654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.50  E-value=0.00093  Score=51.54  Aligned_cols=90  Identities=11%  Similarity=0.039  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC---CceeeccChhhHHHHHHHHCCCCccEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF---DDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      -.+.+++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.   ......++.           ...+|+|
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l-----------~~~aDiI  191 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL-----------KQSYDVI  191 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----------CSCEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHh-----------cCCCCEE
Confidence            36889999996 9999999988888997 999999999887776646653   122222211           1369999


Q ss_pred             EcCcchhHHHH----HHHccccCcEEEEEe
Q 027106          113 FDNVGAEMQEA----AIANMNTYGRVAVCG  138 (228)
Q Consensus       113 ld~~g~~~~~~----~~~~l~~~G~~v~~g  138 (228)
                      ++|++......    -...++++..++.+.
T Consensus       192 InaTp~gm~~~~~~l~~~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          192 INSTSASLDGELPAIDPVIFSSRSVCYDMM  221 (281)
T ss_dssp             EECSCCCC----CSCCGGGEEEEEEEEESC
T ss_pred             EEcCcCCCCCCCCCCCHHHhCcCCEEEEec
Confidence            99987532111    123455555555543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.50  E-value=0.00019  Score=55.25  Aligned_cols=95  Identities=19%  Similarity=0.245  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+...+ .|..+.    +.+.+... ++|+||++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            6999999999999999888877  889999998877665554 4344221 244433    22333322 5899999887


Q ss_pred             h--------hHHHHHHHccccC--cEEEEEeeec
Q 027106          118 A--------EMQEAAIANMNTY--GRVAVCGVIS  141 (228)
Q Consensus       118 ~--------~~~~~~~~~l~~~--G~~v~~g~~~  141 (228)
                      .        .....+++.+...  ++++.+++..
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            3        1223344444433  4888887654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.50  E-value=5.7e-05  Score=56.76  Aligned_cols=73  Identities=18%  Similarity=0.108  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHC-CCCccEEEcCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVG  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~vld~~g  117 (228)
                      ++++||+||+|++|..+++.+...|++|++++++++    .. +.- ....|..+.+++.+.+.+.. .+++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999999999999999888888999999998754    11 110 01134444324444443331 136999999876

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=97.50  E-value=0.00036  Score=53.88  Aligned_cols=96  Identities=18%  Similarity=0.202  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC--------CceeeccChhhHHHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL----GF--------DDAFNYKEETDLKAALKR  103 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~----g~--------~~~~~~~~~~~~~~~~~~  103 (228)
                      ..+.+||+.|  +|.|..+..+++. +. +|++++.+++..+.+++.+    +.        ..-+..... +..+.+..
T Consensus        74 ~~~~~VLdiG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence            4678999999  5567777778777 65 9999999999999988545    21        111111112 33333433


Q ss_pred             HCCCCccEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                        .+.||+|+-...           .+.++.+.+.|+++|.++.-.
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  193 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  193 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence              457999874322           236788899999999998853

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.50  E-value=0.0014  Score=51.36  Aligned_cols=76  Identities=16%  Similarity=0.202  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhCC---C--ceeeccChhhHHHHHHHHCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS---KEKVTLLKDKLGF---D--DAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~---~~~~~~~~~~~g~---~--~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      -.|+++||.|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++.   .  ..++..+.....+.+.     
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence            36889999996 9999999999999998 89999999   7777665534432   1  1223322101122232     


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      .+|+||+|++.
T Consensus       220 ~~DiIINaTp~  230 (312)
T 3t4e_A          220 SADILTNGTKV  230 (312)
T ss_dssp             HCSEEEECSST
T ss_pred             CceEEEECCcC
Confidence            38999999874

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=97.49  E-value=0.00077  Score=52.82  Aligned_cols=95  Identities=12%  Similarity=0.163  Sum_probs=65.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC--ceeeccChhhHHHHHHHHCCCCccEEEcCc-
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFD--DAFNYKEETDLKAALKRYFPDGIDIYFDNV-  116 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vld~~-  116 (228)
                      +||+.|  +|.|..+..+++.. +.+|++++.+++-.+.+++.++..  .-+..... +..+.+.....+.||+|+... 
T Consensus        92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~  168 (317)
T 3gjy_A           92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF  168 (317)
T ss_dssp             EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred             EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence            999999  66778888888854 679999999999999998556531  11111112 444445443345899987422 


Q ss_pred             c----------hhHHHHHHHccccCcEEEEEe
Q 027106          117 G----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       117 g----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .          .+.++.+.+.|+++|.++.-.
T Consensus       169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            1          236788899999999988744

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=97.49  E-value=0.00045  Score=52.81  Aligned_cols=106  Identities=14%  Similarity=0.214  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      +....++.++.+||-.|  .|.|..+..+++..+++|++++.++...+.+++.   .|...-+..... ++.+ + ...+
T Consensus        53 l~~~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~  127 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVG--CGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYA-DAMD-L-PFED  127 (273)
T ss_dssp             HHHHSCCCTTCEEEEES--CTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CSCT
T ss_pred             HHHhcCCCCCCEEEEeC--CCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-cccc-C-CCCC
Confidence            33556788999999999  4558888888888899999999999888877633   233210111111 1110 0 1112


Q ss_pred             CCccEEEcC-----cch--hHHHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYFDN-----VGA--EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vld~-----~g~--~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.||+|+..     ...  ..+..+.++|+|+|+++.....
T Consensus       128 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~  168 (273)
T 3bus_A          128 ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV  168 (273)
T ss_dssp             TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred             CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence            379999742     222  3788889999999999987644

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=97.48  E-value=0.00063  Score=50.42  Aligned_cols=103  Identities=11%  Similarity=0.096  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ......++++||-.|  .|.|..++.+++.+  +.+|++++.+++..+.+++   ..|...-+..... +..+.+.....
T Consensus        52 ~l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~  128 (221)
T 3u81_A           52 AVIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKK  128 (221)
T ss_dssp             HHHHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTT
T ss_pred             HHHHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHH
Confidence            334456789999998  56678888888865  6799999999998888774   2454321222222 44333333332


Q ss_pred             ----CCccEEEcCcchh-------HHHHHHHccccCcEEEEEe
Q 027106          107 ----DGIDIYFDNVGAE-------MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ----~~~d~vld~~g~~-------~~~~~~~~l~~~G~~v~~g  138 (228)
                          +.||+|+-.....       .+... +.|+|||.++.-.
T Consensus       129 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~  170 (221)
T 3u81_A          129 KYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN  170 (221)
T ss_dssp             TSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred             hcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence                4799987544321       12222 7999999998743

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=97.47  E-value=0.00045  Score=53.59  Aligned_cols=101  Identities=10%  Similarity=0.084  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      .+.++.+||-.|  .|.|..+..+++..|++|++++.++...+.+++.   .|...-+..... ++.+ + .+.++.||+
T Consensus        79 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~fD~  153 (297)
T 2o57_A           79 VLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCEDNSYDF  153 (297)
T ss_dssp             CCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCTTCEEE
T ss_pred             CCCCCCEEEEeC--CCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc-Cccc-C-CCCCCCEeE
Confidence            788999999999  4578888888888899999999999888777632   343211111111 1110 0 111237999


Q ss_pred             EEcCcc-------hhHHHHHHHccccCcEEEEEeee
Q 027106          112 YFDNVG-------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       112 vld~~g-------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+....       ...+..+.++|+|||+++.....
T Consensus       154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  189 (297)
T 2o57_A          154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  189 (297)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence            986432       23788899999999999987654

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=97.47  E-value=0.00047  Score=52.67  Aligned_cols=97  Identities=11%  Similarity=0.176  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF---GCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~---g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      +++|.+||-.|  .|.|..+..+++..   |++|++++.+++.++.+++.+   +...-+..... ++    .++..+.+
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~----~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CT----TTCCCCSE
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-cc----cccccccc
Confidence            78999999999  56677777888764   679999999999988887443   32211111111 11    12222368


Q ss_pred             cEEEcCcc-----h----hHHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+|+.+..     .    ..+..+.+.|+|||+++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            88875322     1    267888999999999998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.47  E-value=0.0011  Score=50.78  Aligned_cols=90  Identities=14%  Similarity=0.093  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC--CceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF--DDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .|++++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.  ......+   +..       ...+|+|++
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~-------~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE-------GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT-------TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc-------ccCCCEEEE
Confidence            6889999996 9999999988888997 999999999988777656664  1122222   211       136999999


Q ss_pred             CcchhHHH----HHHHccccCcEEEEEe
Q 027106          115 NVGAEMQE----AAIANMNTYGRVAVCG  138 (228)
Q Consensus       115 ~~g~~~~~----~~~~~l~~~G~~v~~g  138 (228)
                      +++.....    .-...++++..++.+-
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            98753211    0124566666666653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.46  E-value=0.00054  Score=53.49  Aligned_cols=69  Identities=16%  Similarity=0.283  Sum_probs=39.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+    . .  . ...|..+.+.+.+.+...   ++|+||++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~--~-~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K--F-EQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C--e-EEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            5789999999999999999888889999999976543    1 1  0 112222221233333322   58999998874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.45  E-value=0.00042  Score=53.85  Aligned_cols=92  Identities=18%  Similarity=0.203  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--HhCCCce-eeccChhhHHHHHHHHCCCC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK-------EKVTLLKD--KLGFDDA-FNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~-------~~~~~~~~--~~g~~~~-~~~~~~~~~~~~~~~~~~~~  108 (228)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++       ++.+.+++  ..|+..+ .|..+.+.+...+.     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----C
Confidence            46899999999999999988888899999999875       55444331  2344321 34444323333322     5


Q ss_pred             ccEEEcCcch---hHHHHHHHccccC---cEEE
Q 027106          109 IDIYFDNVGA---EMQEAAIANMNTY---GRVA  135 (228)
Q Consensus       109 ~d~vld~~g~---~~~~~~~~~l~~~---G~~v  135 (228)
                      +|+||++++.   .....+++.++..   .+++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999999874   2333444444432   4666

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=97.44  E-value=0.00075  Score=52.97  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=65.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..+.+||+.|  +|.|..+..+++..+ .+|++++.+++..+.+++.+..      ..-+..... +..+.+.. .++.|
T Consensus       107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            4568999999  566777778887654 5999999999999998844421      111222222 44444433 34479


Q ss_pred             cEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106          110 DIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       110 d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+|+....           ...++.+.+.|+++|.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            99884331           246778889999999998853

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.42  E-value=0.00069  Score=52.99  Aligned_cols=88  Identities=18%  Similarity=0.148  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++..|++|++++++.++ +.+. +.|+.. .      ++.+.+.     ..|+|+.+++
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~-~------~l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKF-V------DLETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEE-C------CHHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCccc-c------CHHHHHh-----hCCEEEEecC
Confidence            578999999 5999999999999999999999988766 5555 677632 1      2222332     2699998876


Q ss_pred             h-h----HH-HHHHHccccCcEEEEEeee
Q 027106          118 A-E----MQ-EAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       118 ~-~----~~-~~~~~~l~~~G~~v~~g~~  140 (228)
                      . +    .+ ...++.+++++.++.++..
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            3 1    22 4677889999999998763

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.41  E-value=0.0018  Score=48.07  Aligned_cols=101  Identities=19%  Similarity=0.161  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHH---hC-----CCce-eeccChhh-HH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFG------CYVVGSAGSKEKVTLLKDK---LG-----FDDA-FNYKEETD-LK   98 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g------~~V~~~~~~~~~~~~~~~~---~g-----~~~~-~~~~~~~~-~~   98 (228)
                      .++++++||-.|+ | .|..+..+++..+      .+|++++.+++..+.+++.   .+     ...+ +...+..+ ..
T Consensus        77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            6889999999993 4 4888889998876      5999999999988887733   23     2221 11111101 10


Q ss_pred             HHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEee
Q 027106           99 AALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .....  .+.||+|+..... ..+..+.+.|+++|+++..-.
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011  2479999876654 466888899999999988643

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=97.40  E-value=0.0005  Score=53.74  Aligned_cols=99  Identities=13%  Similarity=0.045  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-------CCceeeccChhhHHHHHHHHCCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG-------FDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ..++.+||+.|  +|.|..+..+++..+ .+|++++.+++..+.+++.+.       ...+ ..... +..+.+....++
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~-D~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVG-DGLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEES-CHHHHHHSSCTT
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEEC-cHHHHHHhccCC
Confidence            46778999999  556777778887654 599999999998888884331       1111 11111 333333321234


Q ss_pred             CccEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .||+|+....           ...+..+.+.|+++|.++...
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            7999885331           246788889999999999864

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=97.40  E-value=0.00075  Score=51.47  Aligned_cols=100  Identities=13%  Similarity=0.059  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ...++.+|.+||-.|  .|.|..+..+++. |++|++++.+++..+.+++...... ..+..+. +.  .......+.||
T Consensus        39 ~~l~l~~g~~VLDlG--cGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIG--ASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEEC--TTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEe--CcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            556789999999999  5678888888774 8899999999999999985443321 1121111 10  00001124799


Q ss_pred             EEEcCcc-----h----hHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNVG-----A----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+.+..     .    ..+..+.+++ |||+++..-
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~  148 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV  148 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence            9986432     1    2677777889 999988643

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.40  E-value=0.0006  Score=52.27  Aligned_cols=96  Identities=17%  Similarity=0.056  Sum_probs=67.5

Q ss_pred             cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHH
Q 027106           19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLK   98 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   98 (228)
                      +||....+...|.+..---.|.+++|.|+++.+|..++.++...|++|+++.+...                     ++.
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~  198 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLS  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            55555555666644444458999999998677999999999999999998874321                     222


Q ss_pred             HHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           99 AALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.++     ..|+|+.++|.+.+ ---++++++..++.+|...
T Consensus       199 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          199 LYTR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHhh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            2222     37999999987522 1225678888888898764

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.40  E-value=0.00046  Score=51.39  Aligned_cols=99  Identities=14%  Similarity=0.030  Sum_probs=67.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....+.++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.+... .  ++..    +..+...  ..+.
T Consensus        64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~----d~~~~~~--~~~~  134 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT-G-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILG----DGTLGYE--EEKP  134 (231)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEES----CGGGCCG--GGCC
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC----Ccccccc--cCCC
Confidence            5567889999999993 4 48888888776 489999999999999888444321 1  1111    1111010  1247


Q ss_pred             ccEEEcCcch-hHHHHHHHccccCcEEEEEee
Q 027106          109 IDIYFDNVGA-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       109 ~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ||+|+....- .....+.+.|+++|+++..-.
T Consensus       135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            9999876543 344678899999999988643

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=97.40  E-value=0.00059  Score=50.11  Aligned_cols=97  Identities=19%  Similarity=0.170  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..++.+||-.|  .|.|..+..+++..  +.+|++++.+++..+.+++.   .|...-+..... +..+.+.. .++ ||
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD  128 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID  128 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence            45678999998  66788888888876  57999999999988887732   343221211111 33332222 234 99


Q ss_pred             EEEcCcc----hhHHHHHHHccccCcEEEEE
Q 027106          111 IYFDNVG----AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       111 ~vld~~g----~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+-...    ...+..+.+.|++||.++.-
T Consensus       129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          129 ILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            9884322    24788888999999998874

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=97.40  E-value=0.00043  Score=54.82  Aligned_cols=99  Identities=18%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC--CceeeccChhhHHHHHHHHCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKL-----GF--DDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.+||..|  +|.|..+..+++..+ .+|++++.+++..+.+++.+     |.  .. +..... +..+.+.....
T Consensus       117 ~~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~r-v~~~~~-D~~~~l~~~~~  192 (334)
T 1xj5_A          117 SIPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPR-VNLVIG-DGVAFLKNAAE  192 (334)
T ss_dssp             TSSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTT-EEEEES-CHHHHHHTSCT
T ss_pred             hCCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCc-EEEEEC-CHHHHHHhccC
Confidence            345678999999  566777788887654 59999999999988888433     21  12 111122 44444433333


Q ss_pred             CCccEEEcCcc-----------hhHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVG-----------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.||+|+....           ...+..+.+.|+++|.++.-
T Consensus       193 ~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          193 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            47999884321           24678889999999999985

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.40  E-value=0.00017  Score=56.94  Aligned_cols=80  Identities=11%  Similarity=0.113  Sum_probs=49.1

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHh----CCCc-eeeccChhhHHHHHHHHCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV--TLLKDKL----GFDD-AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~~----g~~~-~~~~~~~~~~~~~~~~~~~  106 (228)
                      -.-+++.+|||+||+|.+|..+++.+...|.+|++++++..+.  +.+. .+    +... ..|..+.+.+.+.+...  
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   85 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA--   85 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc--
Confidence            3457889999999999999999998888899999999865431  2222 22    1111 12333332333333322  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                       ++|+||++++
T Consensus        86 -~~d~Vih~A~   95 (335)
T 1rpn_A           86 -QPQEVYNLAA   95 (335)
T ss_dssp             -CCSEEEECCS
T ss_pred             -CCCEEEECcc
Confidence             5899999887

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.38  E-value=0.00069  Score=51.95  Aligned_cols=97  Identities=22%  Similarity=0.119  Sum_probs=67.0

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||....+...|.+..---.|.+++|.|+++.+|..+++++...|++|+++.+...                     ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L  198 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------DL  198 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            345555556666644433458999999998666999999999999999988764311                     22


Q ss_pred             HHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.++     ..|+|+.++|.+.+ ---++++++..++.+|.+.
T Consensus       199 ~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          199 KSHTT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             HHhcc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence            22222     37999999887522 1225678888889898654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.38  E-value=0.00071  Score=53.00  Aligned_cols=92  Identities=17%  Similarity=0.194  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--HhCCCce-eeccChhhHHHHHHHHCCCCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK------EKVTLLKD--KLGFDDA-FNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~------~~~~~~~~--~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..+|||+||+|.+|..+++.+...|.+|+++++++      ++.+.+.+  ..+...+ .|..+.+.+...+    . ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~----~-~~   78 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL----K-QV   78 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH----c-CC
Confidence            45799999999999999998888899999999875      34333320  2344222 3444432333322    2 59


Q ss_pred             cEEEcCcchh---HHHHHHHccccC---cEEE
Q 027106          110 DIYFDNVGAE---MQEAAIANMNTY---GRVA  135 (228)
Q Consensus       110 d~vld~~g~~---~~~~~~~~l~~~---G~~v  135 (228)
                      |+||++++..   ....+++.+...   +++|
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999998742   333444444432   4776

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.37  E-value=0.00062  Score=58.30  Aligned_cols=103  Identities=18%  Similarity=0.235  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCCCceeeccCh----hhHHHHHHHHCCCCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS--KEKVTLLKDKLGFDDAFNYKEE----TDLKAALKRYFPDGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~--~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~d~  111 (228)
                      .|+++||+||++|+|.+.++.+...|++|++.++.  ++-.+.++ +.|...+....+.    +.+.+.+.+.. +++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            47899999999999999999999999999998742  22223344 4454322222221    12223332222 46999


Q ss_pred             EEcCcch-----------hHH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          112 YFDNVGA-----------EMQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       112 vld~~g~-----------~~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +++++|.           +.+               +.+++.|.  .+|++|.+++..+
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999872           111               33455663  3689999987543

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.37  E-value=0.00015  Score=54.08  Aligned_cols=96  Identities=20%  Similarity=0.225  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHh---C-----CCce-eeccChhhHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFG-------CYVVGSAGSKEKVTLLKDKL---G-----FDDA-FNYKEETDLK   98 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-------~~V~~~~~~~~~~~~~~~~~---g-----~~~~-~~~~~~~~~~   98 (228)
                      .++++++||-.|+ | .|..+..+++..+       .+|++++.+++..+.+++.+   +     ...+ +...   +..
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~  155 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGR  155 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGG
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC---Ccc
Confidence            5889999999993 4 4888888888766       49999999998888776322   1     1121 1111   111


Q ss_pred             HHHHHHCC-CCccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106           99 AALKRYFP-DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        99 ~~~~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .   .+.. +.||+|+..... .....+.+.|+++|+++..-
T Consensus       156 ~---~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          156 K---GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             G---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             c---CCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            1   1112 479999876654 46678889999999998853

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=97.37  E-value=0.00099  Score=50.79  Aligned_cols=106  Identities=11%  Similarity=0.040  Sum_probs=69.3

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ++.....+.++.+||-.|  .|.|..+..+++..+++|++++.++...+.+++.   .|...-+..... ++.+ + ...
T Consensus        37 ~l~~l~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~  111 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIG--CGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG-SMDD-L-PFR  111 (267)
T ss_dssp             HHTTCCCCCTTCEEEEET--CTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCC
T ss_pred             HHHhcccCCCCCEEEEeC--CCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc-Chhh-C-CCC
Confidence            443333578999999999  4568888888888556999999999988887743   343211111111 1100 0 011


Q ss_pred             CCCccEEEcCcc-----h-hHHHHHHHccccCcEEEEEee
Q 027106          106 PDGIDIYFDNVG-----A-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       106 ~~~~d~vld~~g-----~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .+.||+|+....     . ..+..+.+.|+|||+++....
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            247999985432     1 378888899999999998764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.36  E-value=0.00018  Score=56.72  Aligned_cols=78  Identities=6%  Similarity=0.018  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      -.+.+|||+||+|.+|..+++.+...|.+|++++++......+.+.+. ... ..|..+.+.+.+.+.+.   ++|+||+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih   94 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH   94 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence            356799999999999999999888889999999985433211110221 111 12444432344444332   6999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      +++
T Consensus        95 ~A~   97 (330)
T 2pzm_A           95 SAA   97 (330)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.35  E-value=0.00047  Score=54.19  Aligned_cols=103  Identities=23%  Similarity=0.270  Sum_probs=68.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      +....++++|++||-.|+ |. |..+..+++..+  .+|++++.+++..+.+++.   .|...+ ..... +..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~-d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCG-DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEEC-Chhhccc--
Confidence            335678899999999993 44 888888888754  4799999999988888743   254332 11111 2111111  


Q ss_pred             CCCCccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.||+|+....- .....+.+.|+|+|+++..-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            12479999876554 24467788999999998853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.35  E-value=0.003  Score=51.49  Aligned_cols=96  Identities=13%  Similarity=0.203  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+++|+|+|. |-+|..+++.++..|.+|++++.++++.+.++ +.|...++ |..+. +   .+++..-...|+|+-++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~-~---~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRM-D---LLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCH-H---HHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCH-H---HHHhcCCCccCEEEECC
Confidence            4568999995 99999999999999999999999999999998 88875433 33332 2   23333223789999998


Q ss_pred             chh----HHHHHHHccccCcEEEEEee
Q 027106          117 GAE----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.+    .+....+.+.+..+++.-..
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence            864    33444566667777776543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.35  E-value=0.00018  Score=57.28  Aligned_cols=77  Identities=18%  Similarity=0.350  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc-eeeccChhhHHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD-AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++..+.+.+.+.+.    ... ..|..+...+...+...   ++|+|
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~v   84 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   84 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEE
Confidence            36799999999999999999888889999999987654332321221    111 12444432333333322   58999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      |++++
T Consensus        85 ih~A~   89 (357)
T 1rkx_A           85 FHMAA   89 (357)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99987

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.35  E-value=0.00017  Score=57.00  Aligned_cols=36  Identities=6%  Similarity=0.034  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .++++||+|+++  |+|.++++.+...|++|+++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            367899999864  999999988888999999888654

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.34  E-value=0.0032  Score=45.99  Aligned_cols=95  Identities=15%  Similarity=0.087  Sum_probs=63.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---------------Cc--ee--eccCh
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF---------------DD--AF--NYKEE   94 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---------------~~--~~--~~~~~   94 (228)
                      ..+.++.+||..|  .|.|..+..+++. |++|++++.++...+.++++.+.               ..  ++  |..+.
T Consensus        18 l~~~~~~~vLD~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l   94 (203)
T 1pjz_A           18 LNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   94 (203)
T ss_dssp             HCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cccCCCCEEEEeC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence            4577899999998  4567777778775 89999999999999998855432               11  11  11111


Q ss_pred             hhHHHHHHHHCCCCccEEEcCcc-----h----hHHHHHHHccccCcEEEEEe
Q 027106           95 TDLKAALKRYFPDGIDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        95 ~~~~~~~~~~~~~~~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                       .+.+      .+.||+|++...     .    ..++.+.+.|+|||+++.+.
T Consensus        95 -~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           95 -TARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             -THHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             -Cccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence             1110      025999986321     1    15678889999999954443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.34  E-value=0.00057  Score=54.13  Aligned_cols=76  Identities=18%  Similarity=0.237  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHHhCCC-c--eeeccChhhHHHHHHHHC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----------EKVTLLKDKLGFD-D--AFNYKEETDLKAALKRYF  105 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----------~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~  105 (228)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+.. .  ..|..+.+.+.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            46899999999999999988888899999987632          3333343112321 1  12444432333333321 


Q ss_pred             CCCccEEEcCcc
Q 027106          106 PDGIDIYFDNVG  117 (228)
Q Consensus       106 ~~~~d~vld~~g  117 (228)
                        ++|+||++++
T Consensus        81 --~~d~vih~A~   90 (348)
T 1ek6_A           81 --SFMAVIHFAG   90 (348)
T ss_dssp             --CEEEEEECCS
T ss_pred             --CCCEEEECCC
Confidence              6999999987

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=97.34  E-value=0.00031  Score=52.62  Aligned_cols=103  Identities=12%  Similarity=0.122  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...++.++.+||-.|  .|.|..+..+++.. +.+|++++.+++..+.+++.   .|...-+..... +..+.+.....+
T Consensus        65 ~~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  141 (232)
T 3ntv_A           65 QLIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG-NALEQFENVNDK  141 (232)
T ss_dssp             HHHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CGGGCHHHHTTS
T ss_pred             HHHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhhccC
Confidence            344556889999998  56677778888754 67999999999988887743   344211111111 211112201134


Q ss_pred             CccEEEcCcch----hHHHHHHHccccCcEEEEE
Q 027106          108 GIDIYFDNVGA----EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       108 ~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~  137 (228)
                      .||+|+-....    ..+..+.+.|++||.++.-
T Consensus       142 ~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          142 VYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             CEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            79998743322    3678888999999999874

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=97.34  E-value=0.00092  Score=50.53  Aligned_cols=106  Identities=11%  Similarity=0.106  Sum_probs=70.3

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      .+.....+.++++||-.|  .|.|..+..+++..+.+|++++.++...+.+++.   .|...-+..... ++. .+ ...
T Consensus        37 ~l~~l~~~~~~~~vLDiG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~-~~-~~~  111 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIG--CGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITG-SMD-NL-PFQ  111 (257)
T ss_dssp             HHTTSCCCCTTCEEEEET--CTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTT-SC-SSC
T ss_pred             HHHHHhcCCCCCeEEEeC--CCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC-Chh-hC-CCC
Confidence            443345778999999999  4568889999998878999999999988877632   343220111111 110 00 011


Q ss_pred             CCCccEEEcC-----cch-hHHHHHHHccccCcEEEEEee
Q 027106          106 PDGIDIYFDN-----VGA-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       106 ~~~~d~vld~-----~g~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .+.||+|+..     .+. ..+..+.++|+|||+++....
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            2479999742     222 478889999999999998764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.33  E-value=0.0016  Score=52.95  Aligned_cols=96  Identities=15%  Similarity=0.044  Sum_probs=65.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCC-----Cc--eeeccChhhHHHHHHHHCCCCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG---CYVVGSAGSKEKVTLLKDKLGF-----DD--AFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~~~~~~~~~~~~~~~g~-----~~--~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      .+|+|+|+ |++|..+++.+...|   .+|++++++.++.+.+.++++.     ..  .+|..+.+++.+.+.+.   ++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CC
Confidence            37999997 999999998888777   3899999999988776645532     11  23444432444444432   58


Q ss_pred             cEEEcCcchh-HHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNVGAE-MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+|++|++.. ....+..++..+-.++.+..
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEecC
Confidence            9999999863 44445566777777776543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.33  E-value=0.00078  Score=51.52  Aligned_cols=85  Identities=15%  Similarity=0.128  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +.+++|.|+ |++|.+++..+...|.+|+++.|+.++.+.+. ++|.. ....++.            ..+|+|++|++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l------------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK------------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS------------SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh------------ccCCEEEEcccC
Confidence            889999995 99999999999999999999999999988887 78742 2332221            158999999863


Q ss_pred             h-----HH--HHHHHccccCcEEEEEe
Q 027106          119 E-----MQ--EAAIANMNTYGRVAVCG  138 (228)
Q Consensus       119 ~-----~~--~~~~~~l~~~G~~v~~g  138 (228)
                      .     .+  ......++++..++.+.
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence            2     11  11223567777776654

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=97.33  E-value=0.00063  Score=51.68  Aligned_cols=99  Identities=15%  Similarity=0.095  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--------------------CceeeccCh
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--------------------DDAFNYKEE   94 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--------------------~~~~~~~~~   94 (228)
                      ...++.+||..|  .|.|..+..+++. |++|++++.++...+.++++.+.                    .. +.....
T Consensus        65 ~~~~~~~vLD~G--CG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~  140 (252)
T 2gb4_A           65 KGQSGLRVFFPL--CGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS-ISLYCC  140 (252)
T ss_dssp             TTCCSCEEEETT--CTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS-EEEEES
T ss_pred             cCCCCCeEEEeC--CCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc-eEEEEC
Confidence            346889999998  4567777777765 89999999999999988745532                    11 111111


Q ss_pred             hhHHHHHHHHCCCCccEEEcCcc-----h----hHHHHHHHccccCcEEEEEee
Q 027106           95 TDLKAALKRYFPDGIDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        95 ~~~~~~~~~~~~~~~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                       ++.+ +.....+.||+|++...     .    ..+..+.++|+|||+++.+..
T Consensus       141 -D~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~  192 (252)
T 2gb4_A          141 -SIFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL  192 (252)
T ss_dssp             -CTTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             -cccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence             1111 11111147999996432     1    267788899999999976543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.33  E-value=0.0015  Score=54.07  Aligned_cols=94  Identities=14%  Similarity=0.142  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      ++.+|+|+|+ |++|..++..+... +.+|++++++.++.+.+.+..+... .++..+..++.+.+.     ++|+|++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            4678999996 99999998888777 6799999999888776652334321 233333213333332     58999999


Q ss_pred             cchh-HHHHHHHccccCcEEEEE
Q 027106          116 VGAE-MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       116 ~g~~-~~~~~~~~l~~~G~~v~~  137 (228)
                      ++.. .......+++++-.++..
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CchhhhHHHHHHHHhcCCEEEEe
Confidence            9864 223344566666666664

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=97.33  E-value=0.00015  Score=54.83  Aligned_cols=104  Identities=11%  Similarity=0.036  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH--
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY--  104 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~--  104 (228)
                      ......++.+||-.|  .|.|..++.+|+..  +.+|++++.+++..+.+++   ..|...-+..... +..+.+...  
T Consensus        54 ~l~~~~~~~~VLDiG--~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~~~~  130 (242)
T 3r3h_A           54 MLIRLTRAKKVLELG--TFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG-PALDTLHSLLN  130 (242)
T ss_dssp             HHHHHHTCSEEEEEE--SCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHhhcCcCEEEEee--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHhh
Confidence            334456788999998  56677788888876  5699999988765444332   4565321222111 332333222  


Q ss_pred             --CCCCccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          105 --FPDGIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 --~~~~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                        ..+.||+|+-....    ..+..+.+.|+|||.++.-.
T Consensus       131 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          131 EGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             HHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence              12479998743332    26788899999999998854

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.32  E-value=0.00041  Score=51.59  Aligned_cols=75  Identities=16%  Similarity=0.214  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHH
Q 027106           38 KGEKVFVSAA----------------SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAAL  101 (228)
Q Consensus        38 ~g~~VlI~ga----------------~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  101 (228)
                      .|.+|||+||                +|++|.+.++.+...|++|+++.+.. ..+.   ..|. .+++..+.+++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc---CCCC-eEEccCcHHHHHHHH
Confidence            5889999999                58999999999999999999987653 1110   1122 345555443555555


Q ss_pred             HHHCCCCccEEEcCcch
Q 027106          102 KRYFPDGIDIYFDNVGA  118 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g~  118 (228)
                      .+.. +++|+++++++-
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 369999999884

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.32  E-value=0.0004  Score=51.60  Aligned_cols=98  Identities=19%  Similarity=0.173  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hC-----CCceeeccChhhHHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LG-----FDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g-----~~~~~~~~~~~~~~~~~~~~  104 (228)
                      .++++++||-.|+ | .|..+..+++..|  .+|++++.++...+.+++.   .|     ...+ ..... +.....  .
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~-d~~~~~--~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV-QLVVG-DGRMGY--A  147 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE-EEEES-CGGGCC--G
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE-EEEEC-CcccCc--c
Confidence            4789999999994 4 4888888888876  5999999999988887632   22     1121 11111 111000  0


Q ss_pred             CCCCccEEEcCcch-hHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.||+|+..... ..+..+.+.|+++|+++..-
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            12379999876554 46688899999999998854

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.31  E-value=0.00072  Score=55.88  Aligned_cols=91  Identities=19%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      --.|.+|.|.| .|.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.+     ...|+|+.+
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHH-----hcCCEEEEC
Confidence            45799999999 599999999999999999999999987754444 45542 11      222222     247999988


Q ss_pred             cchh--HHHHHHHccccCcEEEEEeee
Q 027106          116 VGAE--MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       116 ~g~~--~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .+..  .-...++.|++++.++.+|..
T Consensus       320 ~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             CChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            7643  224677889999999998854

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.31  E-value=0.00098  Score=52.12  Aligned_cols=75  Identities=12%  Similarity=0.181  Sum_probs=48.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      -++-.+|||+||+|.+|..+++.+...|.+|++++++... +    .++... ..|..+...+.+.+..   +++|+||+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence            3456799999999999999999888889999999987654 1    122211 1233433233333332   25899999


Q ss_pred             Ccch
Q 027106          115 NVGA  118 (228)
Q Consensus       115 ~~g~  118 (228)
                      +++.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            8873

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.31  E-value=0.00043  Score=51.87  Aligned_cols=99  Identities=9%  Similarity=-0.068  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF--DDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .+++.+||-.|  .|.|..+..+++....+|++++.+++..+.+++....  ..+ ..... ++.+....+..+.||+|+
T Consensus        58 ~~~~~~vLDiG--cGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~~-d~~~~~~~~~~~~fD~V~  133 (236)
T 1zx0_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKV-IPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEE-EEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             CCCCCeEEEEe--ccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCe-EEEec-CHHHhhcccCCCceEEEE
Confidence            57889999999  4456777777554334899999999999988843311  121 11112 333322233334799998


Q ss_pred             c-Ccc----h-------hHHHHHHHccccCcEEEEEe
Q 027106          114 D-NVG----A-------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       114 d-~~g----~-------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      . +.+    .       ..+..+.+.|+|||+++.+.
T Consensus       134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  170 (236)
T 1zx0_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence            6 222    1       12778889999999998764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=97.31  E-value=0.0013  Score=58.19  Aligned_cols=82  Identities=17%  Similarity=0.176  Sum_probs=56.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHH---H----HHHHHHHhCCCc---eeeccChhhHHHHHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAK-LFGC-YVVGSAGSKE---K----VTLLKDKLGFDD---AFNYKEETDLKAALKR  103 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~-~~g~-~V~~~~~~~~---~----~~~~~~~~g~~~---~~~~~~~~~~~~~~~~  103 (228)
                      +.++.++||+||+|++|.+.++.+. ..|+ +|+.++++..   +    .+.++ ..|...   ..|..+.++....+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999988776 7899 6888888732   2    22333 456522   2355555355555555


Q ss_pred             HCCC-CccEEEcCcch
Q 027106          104 YFPD-GIDIYFDNVGA  118 (228)
Q Consensus       104 ~~~~-~~d~vld~~g~  118 (228)
                      .... ++|++++++|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            5443 79999999873

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.31  E-value=0.0014  Score=50.61  Aligned_cols=97  Identities=15%  Similarity=0.066  Sum_probs=67.6

Q ss_pred             cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHH
Q 027106           19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLK   98 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   98 (228)
                      +||....+...|.+..---.|.+++|.|.++.+|..++.++...|++|+++.+....++                   +.
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~  205 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MI  205 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hh
Confidence            55666666666655444468999999998666999999999999999998885322211                   00


Q ss_pred             HHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106           99 AALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.++     ..|+|+.++|.+ .+.  -++++++..++.+|.+.
T Consensus       206 ~~~~-----~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          206 DYLR-----TADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             HHHH-----TCSEEEECSCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred             hhhc-----cCCEEEECCCCCCCCc--HHhcCCCcEEEEEeccC
Confidence            2222     279999988865 322  25678898999998754

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.31  E-value=0.0007  Score=53.19  Aligned_cols=35  Identities=20%  Similarity=0.330  Sum_probs=31.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           38 KGEKVFVSAA--SGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        38 ~g~~VlI~ga--~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      .|+++||+||  ++++|.++++.+...|++|++++++
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            5789999998  8999999999888899999998754

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.30  E-value=0.00073  Score=56.09  Aligned_cols=91  Identities=19%  Similarity=0.172  Sum_probs=67.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      .-.|.+|.|.| .|.+|..+++.++.+|++|+++++++.+...+. ..|... .      ++.+.+     ...|+|+.+
T Consensus       274 ~L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~~-~------~l~ell-----~~aDiVi~~  339 (494)
T 3d64_A          274 MIAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYRV-V------TMEYAA-----DKADIFVTA  339 (494)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCEE-C------CHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCEe-C------CHHHHH-----hcCCEEEEC
Confidence            45789999999 599999999999999999999999887643444 445421 1      222222     247999988


Q ss_pred             cchh--HHHHHHHccccCcEEEEEeee
Q 027106          116 VGAE--MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       116 ~g~~--~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ++..  .-...++.|++++.++.+|..
T Consensus       340 ~~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             CCcccccCHHHHhhCCCCcEEEEcCCC
Confidence            7643  225678899999999998864

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=97.30  E-value=0.00089  Score=51.73  Aligned_cols=99  Identities=16%  Similarity=0.143  Sum_probs=65.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ..++.+||+.|  +|.|..+..+++..+ .+|++++.+++..+.+++.+..      +.-+..... +..+.+... ++.
T Consensus        76 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CSC
T ss_pred             CCCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CCC
Confidence            45678999999  556777777777654 5999999999999998844432      111111111 333333332 447


Q ss_pred             ccEEEc-Cc---c-------hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFD-NV---G-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld-~~---g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+. ..   +       ...++.+.+.|+++|.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            999874 21   1       246788889999999999864

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=97.30  E-value=0.0031  Score=45.10  Aligned_cols=102  Identities=14%  Similarity=0.049  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc--eeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD--AFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~  104 (228)
                      +......+++++||-.|  .|.|..+..+++. +.+|++++.++...+.+++.+   +...  +-... . ++.+.   .
T Consensus        44 l~~~~~~~~~~~vLdiG--~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-~-d~~~~---~  115 (194)
T 1dus_A           44 LVENVVVDKDDDILDLG--CGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVH-S-DLYEN---V  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEE-C-STTTT---C
T ss_pred             HHHHcccCCCCeEEEeC--CCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEE-C-chhcc---c
Confidence            33556778999999998  3457777777777 889999999999888877433   4332  21111 1 11111   1


Q ss_pred             CCCCccEEEcCcc--------hhHHHHHHHccccCcEEEEEee
Q 027106          105 FPDGIDIYFDNVG--------AEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       105 ~~~~~d~vld~~g--------~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..+.+|+|+....        ...+..+.+.|+++|.++....
T Consensus       116 ~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence            1237999986542        1367778899999999998754

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=97.29  E-value=0.0029  Score=51.25  Aligned_cols=98  Identities=15%  Similarity=0.189  Sum_probs=65.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +++|++||=.|  .+.|..++.+|+. |++|++++.++...+.+++.   .|...-+..  . +..+.+.... +.||+|
T Consensus       212 ~~~g~~VLDlg--~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~~--~-D~~~~l~~~~-~~fD~I  284 (393)
T 4dmg_A          212 VRPGERVLDVY--SYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIRH--G-EALPTLRGLE-GPFHHV  284 (393)
T ss_dssp             CCTTCEEEEES--CTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--S-CHHHHHHTCC-CCEEEE
T ss_pred             hcCCCeEEEcc--cchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEE--c-cHHHHHHHhc-CCCCEE
Confidence            45699999887  4556666666664 88899999999998888743   355422222  2 4444444432 349998


Q ss_pred             EcCcch----------------hHHHHHHHccccCcEEEEEeee
Q 027106          113 FDNVGA----------------EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       113 ld~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +-..+.                ..+..++++|+|+|.++.+...
T Consensus       285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s  328 (393)
T 4dmg_A          285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS  328 (393)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence            753321                4677788999999999977643

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=97.29  E-value=0.0012  Score=49.28  Aligned_cols=103  Identities=16%  Similarity=0.195  Sum_probs=67.0

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      .+.......++.+||-.|  .|.|..+..+++. |. +|++++.++...+.+++......+ ..... +... + ....+
T Consensus        34 ~l~~~~~~~~~~~vLdiG--~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~-d~~~-~-~~~~~  106 (243)
T 3bkw_A           34 ALRAMLPEVGGLRIVDLG--CGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGI-TYERA-DLDK-L-HLPQD  106 (243)
T ss_dssp             HHHHHSCCCTTCEEEEET--CTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSE-EEEEC-CGGG-C-CCCTT
T ss_pred             HHHHhccccCCCEEEEEc--CcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCc-eEEEc-Chhh-c-cCCCC
Confidence            344556667899999998  3457777777765 77 999999999999998833322211 11111 1111 0 01123


Q ss_pred             CccEEEcCcc-------hhHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVG-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|+|+....       ...+..+.+.|+++|+++...
T Consensus       107 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          107 SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            7999986432       137788889999999998864

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.29  E-value=0.0014  Score=49.95  Aligned_cols=94  Identities=13%  Similarity=0.027  Sum_probs=67.8

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||.......+|.+..  -.|.+++|.|+++.+|..+++++...|++|+++.+..                    . ++
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------~-~L  187 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------K-DI  187 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CH
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------c-cH
Confidence            34565566666665544  7899999999866799999999999999999887431                    1 33


Q ss_pred             HHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.+++     .|+|+.++|.+ .+.  -+++++|..++.+|...
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred             HHhhcc-----CCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence            334443     69999998875 222  25678888999998754

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.28  E-value=0.0013  Score=65.36  Aligned_cols=83  Identities=13%  Similarity=0.034  Sum_probs=58.9

Q ss_pred             CCCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHhCCC--c----eeeccChhhHHHHHHH
Q 027106           36 PKKGEKVFVSAASGS-VGHLVGQYAKLFGCYVVGSAGSKEK-----VTLLKDKLGFD--D----AFNYKEETDLKAALKR  103 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~-~G~~a~~~a~~~g~~V~~~~~~~~~-----~~~~~~~~g~~--~----~~~~~~~~~~~~~~~~  103 (228)
                      .-.|+++||+||++| +|.+.++.+...|++|++++++.++     .+.+.++++..  .    ..|..+.++....+.+
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            357899999999999 9999999999999999999987655     34443355431  1    1355554355555554


Q ss_pred             HCC------CCccEEEcCcch
Q 027106          104 YFP------DGIDIYFDNVGA  118 (228)
Q Consensus       104 ~~~------~~~d~vld~~g~  118 (228)
                      ...      |++|++++++|.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence            443      479999999874

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.28  E-value=0.00093  Score=52.08  Aligned_cols=93  Identities=12%  Similarity=0.102  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++...+ +.   +... + .-+. . .+.+.+... ++|+||++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~-~-~~Dl-~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEY-R-VSDY-T-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEE-E-ECCC-C-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEE-E-Eccc-c-HHHHHHhhc-CCCEEEEcccc
Confidence            368999999999999999999999999999998854433 32   3322 1 1122 2 334444433 69999998863


Q ss_pred             h--------------HHHHHHHccccC--cEEEEEeee
Q 027106          119 E--------------MQEAAIANMNTY--GRVAVCGVI  140 (228)
Q Consensus       119 ~--------------~~~~~~~~l~~~--G~~v~~g~~  140 (228)
                      .              ....+++.++..  .++|.+++.
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            1              123344444433  478887763

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=97.28  E-value=0.0011  Score=50.47  Aligned_cols=106  Identities=15%  Similarity=0.084  Sum_probs=67.1

Q ss_pred             HHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC
Q 027106           30 LFEIGKPK-KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        30 l~~~~~~~-~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      +.....++ ++++||-.|  .|.|..+..+++....+|++++.++...+.+++.   .+...-+..... ++.+....+.
T Consensus        40 l~~~~~~~~~~~~vLDlG--~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~-D~~~~~~~~~  116 (259)
T 3lpm_A           40 LAKFSYLPIRKGKIIDLC--SGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY-DLKKITDLIP  116 (259)
T ss_dssp             HHHHCCCCSSCCEEEETT--CTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS-CGGGGGGTSC
T ss_pred             HHHHhcCCCCCCEEEEcC--CchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC-cHHHhhhhhc
Confidence            33456778 899999998  4456666677766555999999999988887742   243210111111 2211111122


Q ss_pred             CCCccEEEcCcc---------------------------hhHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFDNVG---------------------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld~~g---------------------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+.||+|+.+.+                           ...+..+.++|+++|+++.+-
T Consensus       117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  176 (259)
T 3lpm_A          117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH  176 (259)
T ss_dssp             TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence            348999987321                           126678889999999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.27  E-value=0.00031  Score=55.44  Aligned_cols=96  Identities=20%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      .+|||+||+|.+|..+++.+...|.+|+++++++.+.+.+. ..+...+ .|..+.    +.+.+... ++|+||++++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence            48999999999999999988889999999998766543333 2233221 233332    22333332 59999999873


Q ss_pred             hH----------------HHHHHHcccc-C-cEEEEEeeec
Q 027106          119 EM----------------QEAAIANMNT-Y-GRVAVCGVIS  141 (228)
Q Consensus       119 ~~----------------~~~~~~~l~~-~-G~~v~~g~~~  141 (228)
                      ..                ...+++.+.+ + +++|.+++..
T Consensus        88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~  128 (342)
T 2x4g_A           88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY  128 (342)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence            11                1223333333 3 6899887654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.27  E-value=0.0011  Score=51.71  Aligned_cols=93  Identities=16%  Similarity=0.190  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HhCCCc-eeeccChhhHHHHHHHHCCCCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-----KEKVTLLKD--KLGFDD-AFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-----~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..+|||+||+|.+|..+++.+...|.+|++++++     +++.+.+++  ..+... ..|..+.+.+.+.+    . ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----~-~~d   78 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL----K-QVD   78 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH----T-TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH----h-CCC
Confidence            4579999999999999999888889999999987     445444431  223322 12444432333332    2 599


Q ss_pred             EEEcCcchh-------HHHHHHHccccC---cEEEE
Q 027106          111 IYFDNVGAE-------MQEAAIANMNTY---GRVAV  136 (228)
Q Consensus       111 ~vld~~g~~-------~~~~~~~~l~~~---G~~v~  136 (228)
                      +||++++..       ....+++.++..   .+++.
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           79 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             EEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             EEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            999988632       233444544443   37763

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=97.27  E-value=0.00095  Score=49.79  Aligned_cols=101  Identities=13%  Similarity=0.148  Sum_probs=66.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Cceee-ccChhhHHHHHHHHCCCCc
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF-DDAFN-YKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~  109 (228)
                      ...++++++||-.|+ |. |..+..+++..| .+|++++.+++..+.+++.... ..+.. ..+..+.. ..... .+.+
T Consensus        69 ~~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~-~~~~  144 (230)
T 1fbn_A           69 VMPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ-EYANI-VEKV  144 (230)
T ss_dssp             CCCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG-GGTTT-SCCE
T ss_pred             ccCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc-ccccc-CccE
Confidence            345788999999994 43 888888888876 5999999999988887733322 22211 11110100 00011 1479


Q ss_pred             cEEEcCcch----h-HHHHHHHccccCcEEEEE
Q 027106          110 DIYFDNVGA----E-MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       110 d~vld~~g~----~-~~~~~~~~l~~~G~~v~~  137 (228)
                      |+|+.....    . .+..+.+.|+|+|+++..
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            999865432    2 478888999999999986

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.26  E-value=0.001  Score=51.48  Aligned_cols=95  Identities=17%  Similarity=0.061  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKV--TLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~--~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      ..+|||+||+|.+|..+++.+...| .+|+++++++++.  +.+. ..+...+ .|..+.+.+...+     .++|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~-----~~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELAL-----NGAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHH-----TTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHH-----hcCCEEEE
Confidence            4789999999999999998888778 8999999886653  2233 3454322 2444432332222     25899999


Q ss_pred             Ccchh----------HHHHHHHcccc--CcEEEEEee
Q 027106          115 NVGAE----------MQEAAIANMNT--YGRVAVCGV  139 (228)
Q Consensus       115 ~~g~~----------~~~~~~~~l~~--~G~~v~~g~  139 (228)
                      +++..          ....+++.+..  -+++|..+.
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            98731          12234444433  257887654

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=97.26  E-value=0.0015  Score=47.80  Aligned_cols=94  Identities=16%  Similarity=0.110  Sum_probs=66.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ..+.++.+||-.|  .|.|..+..+++. |.+|++++.++...+.+++.++...+. .+-. ++    .  ..+.||+|+
T Consensus        39 ~~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~d~~-~~----~--~~~~fD~v~  107 (211)
T 3e23_A           39 GELPAGAKILELG--CGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRT-MLFH-QL----D--AIDAYDAVW  107 (211)
T ss_dssp             TTSCTTCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEE-CCGG-GC----C--CCSCEEEEE
T ss_pred             HhcCCCCcEEEEC--CCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEE-eeec-cC----C--CCCcEEEEE
Confidence            4577899999998  4567777777765 889999999999999988555543321 1111 11    0  234799998


Q ss_pred             cCcc-------h--hHHHHHHHccccCcEEEEEe
Q 027106          114 DNVG-------A--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       114 d~~g-------~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ....       .  ..+..+.+.|+++|+++..-
T Consensus       108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            6532       1  37788889999999998864

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.26  E-value=0.0012  Score=50.62  Aligned_cols=97  Identities=19%  Similarity=0.092  Sum_probs=67.9

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||....+...|.+..---.|.+++|.|.++.+|..++.++...|++|+++.+...                     ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~---------------------~L  198 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR---------------------DL  198 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS---------------------CH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc---------------------CH
Confidence            345655556666644433458999999998677999999999999999998874321                     22


Q ss_pred             HHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.++     ..|+|+.++|.+.+ ---++++++..++.+|...
T Consensus       199 ~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          199 ADHVS-----RADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHH-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             HHHhc-----cCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence            22333     27999999887522 1225678999999998754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.26  E-value=0.00013  Score=55.80  Aligned_cols=95  Identities=12%  Similarity=0.077  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +++|||+||+|++|..+++.+...|++|+++++++.+.+    ..+... ..|..+.+.+...+    . ++|+|++++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~----~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMV----A-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHH----T-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHH----c-CCCEEEECCC
Confidence            568999999999999999888888999999998764422    111111 13444431222222    2 5999999987


Q ss_pred             hh---HHH-----------HHHHcccc--CcEEEEEeeecc
Q 027106          118 AE---MQE-----------AAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       118 ~~---~~~-----------~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      ..   .+.           .+++.+.+  .+++|.+++...
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            31   111           12233332  369999887543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.26  E-value=0.0014  Score=52.61  Aligned_cols=92  Identities=13%  Similarity=0.084  Sum_probs=64.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      .+|+|.|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+.+.+.+.+.     +.|+|++|++..
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCCc
Confidence            47999997 9999988877643 568999999998888776 433222345444323333332     489999999874


Q ss_pred             -HHHHHHHccccCcEEEEEee
Q 027106          120 -MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       120 -~~~~~~~~l~~~G~~v~~g~  139 (228)
                       ....+-.|+..+-.++.+..
T Consensus        89 ~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHTCEEEECCC
T ss_pred             ccchHHHHHHhcCcceEeeec
Confidence             45555667788889998764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.25  E-value=0.0017  Score=51.56  Aligned_cols=75  Identities=13%  Similarity=0.177  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHh------CCCc-eeeccChhhHHHHHHHHCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK----EKVTLLKDKL------GFDD-AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~  106 (228)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+.+.+      +... ..|..+.+.+.+.+    .
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----A  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----T
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh----c
Confidence            357999999999999999998888899999999754    2333333122      1111 12333331222222    2


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                       ++|+||++++
T Consensus       102 -~~d~vih~A~  111 (352)
T 1sb8_A          102 -GVDYVLHQAA  111 (352)
T ss_dssp             -TCSEEEECCS
T ss_pred             -CCCEEEECCc
Confidence             6999999987

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.25  E-value=0.00091  Score=52.94  Aligned_cols=88  Identities=16%  Similarity=0.178  Sum_probs=65.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|+| .|.+|...++.++..|++|++.+++..+ +.+. +.|+..    .   ++.+.+.     ..|+|+.++
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEec
Confidence            3678999999 5999999999999999999999987655 4455 677632    1   2222222     379999887


Q ss_pred             chh-----HH-HHHHHccccCcEEEEEee
Q 027106          117 GAE-----MQ-EAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~-----~~-~~~~~~l~~~G~~v~~g~  139 (228)
                      +..     .+ ...++.|++++.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            642     22 467889999999999886

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.25  E-value=0.02  Score=45.35  Aligned_cols=89  Identities=19%  Similarity=0.268  Sum_probs=59.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-H-cCCEEE-EEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAK-L-FGCYVV-GSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~-~-~g~~V~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -+|.|+|+ |.+|...++.++ . .+++++ ++++++++.+.+.+++|...+++     ++.+.+.   ..++|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhc---CCCCCEEEEeC
Confidence            48999995 999998887776 4 466765 56778887766654677644332     3332222   12699999999


Q ss_pred             chh-HHHHHHHccccCcEEEEEe
Q 027106          117 GAE-MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       117 g~~-~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.. ..+.+..+++.| +-|.+.
T Consensus        80 p~~~h~~~~~~al~~G-~~v~~e  101 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAG-LNVFCE  101 (346)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             ChHhHHHHHHHHHHCC-CEEEEc
Confidence            874 777777777765 444443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.25  E-value=0.0013  Score=50.99  Aligned_cols=93  Identities=20%  Similarity=0.253  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHH--HhCCCce-eeccChhhHHHHHHHHCCCCc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS------KEKVTLLKD--KLGFDDA-FNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~------~~~~~~~~~--~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..+|||+||+|.+|..+++.+...|.+|++++++      +++.+.+++  ..|...+ .|..+.+.+...+.     ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence            4689999999999999999888889999999986      344443331  2343221 24444323333332     58


Q ss_pred             cEEEcCcchh---HHHHHHHcccc---CcEEEE
Q 027106          110 DIYFDNVGAE---MQEAAIANMNT---YGRVAV  136 (228)
Q Consensus       110 d~vld~~g~~---~~~~~~~~l~~---~G~~v~  136 (228)
                      |+||++++..   ....+++.++.   -.+++.
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~  111 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP  111 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEee
Confidence            9999998752   22333444433   246763

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=97.24  E-value=0.001  Score=51.16  Aligned_cols=95  Identities=12%  Similarity=0.053  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC--Cce-eeccChhhHHHHHHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKL-----GF--DDA-FNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~-----g~--~~~-~~~~~~~~~~~~~~~~~~~~  108 (228)
                      .+.+||+.|  +|.|..+..+++..+ .+|++++.+++-.+.+++.+     +.  ..+ +...   +..+.+.. .++.
T Consensus        75 ~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~---D~~~~l~~-~~~~  148 (275)
T 1iy9_A           75 NPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD---DGFMHIAK-SENQ  148 (275)
T ss_dssp             SCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES---CSHHHHHT-CCSC
T ss_pred             CCCEEEEEC--CchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC---cHHHHHhh-CCCC
Confidence            568999999  456777777777766 49999999999988888433     22  121 1112   32333332 2347


Q ss_pred             ccEEEcCcc-----------hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFDNVG-----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld~~g-----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+....           .+.++.+.+.|+++|.++.-.
T Consensus       149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            999875332           247889999999999998853

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.24  E-value=0.0022  Score=49.19  Aligned_cols=95  Identities=9%  Similarity=-0.007  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -++.+++|.|+ |++|.+++..+...|.+|+++.++.++.+.+.++++...-+...   ++    .+...+.+|+|++++
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~---~~----~~~~~~~~DivIn~t  188 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAV---SM----DSIPLQTYDLVINAT  188 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEE---EG----GGCCCSCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEe---eH----HHhccCCCCEEEECC
Confidence            36789999996 99999999888888999999999998877666455431001111   11    011013699999999


Q ss_pred             chhHHHHH----HHccccCcEEEEEee
Q 027106          117 GAEMQEAA----IANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~~~~~~----~~~l~~~G~~v~~g~  139 (228)
                      +.......    ...+.++..++.+..
T Consensus       189 ~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (272)
T 1p77_A          189 SAGLSGGTASVDAEILKLGSAFYDMQY  215 (272)
T ss_dssp             CC-------CCCHHHHHHCSCEEESCC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEeeC
Confidence            86432111    133455666666553

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=97.24  E-value=0.0014  Score=49.63  Aligned_cols=102  Identities=17%  Similarity=0.240  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....+.++.+||-.|+  |.|..+..+++. +.+|++++.+++..+.+++.+   |...+ ..... +..+ + .+.++.
T Consensus        31 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v-~~~~~-d~~~-l-~~~~~~  103 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQV-EYVQG-DAEQ-M-PFTDER  103 (260)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEEC-CC-C-C-CSCTTC
T ss_pred             HHhCCCCCCEEEEEeC--CCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCce-EEEEe-cHHh-C-CCCCCC
Confidence            4456789999999993  467777777765 459999999999888877332   33221 11111 1110 0 112247


Q ss_pred             ccEEEcCcch-------hHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVGA-------EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g~-------~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ||+|+....-       ..+..+.+.|+|||+++.....
T Consensus       104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~  142 (260)
T 1vl5_A          104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS  142 (260)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence            9999875331       4788899999999999987543

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.22  E-value=0.0013  Score=50.71  Aligned_cols=97  Identities=16%  Similarity=0.119  Sum_probs=65.9

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||........|.+..---.|.+|+|.|++..+|.-+++++...|++|+++.+...                     ++
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L  202 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------HL  202 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc---------------------cH
Confidence            345554444445533332358999999998667999999999999999998863311                     33


Q ss_pred             HHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.++     ..|+||.++|.+.+ ---++++++..++.+|.+.
T Consensus       203 ~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          203 DEEVN-----KGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             HHHhc-----cCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence            33333     37999999987532 1224578999999998753

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=97.22  E-value=0.00053  Score=51.03  Aligned_cols=95  Identities=9%  Similarity=0.051  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHC-CCCccEEEc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF-PDGIDIYFD  114 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~vld  114 (228)
                      +.++.+||-.|  .|.|..+..+++. |++|++++.++...+.+++......++..+-. +   .+ ... .+.||+|+.
T Consensus        46 ~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~---~~-~~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAG--CGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK-G---EL-PAGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC-S---SC-CTTCCCCEEEEEE
T ss_pred             CCCCCeEEEeC--CCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh-h---cc-CCcCCCCEEEEEe
Confidence            47889999999  4557777777776 88999999999999998833221222221110 0   00 112 347999997


Q ss_pred             Ccch-hHHHHHHHccccCcEEEEEe
Q 027106          115 NVGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       115 ~~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .... ..+..+.+.|+|+|+++..+
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            6543 58889999999999999443

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=97.22  E-value=0.00053  Score=51.03  Aligned_cols=98  Identities=17%  Similarity=0.207  Sum_probs=65.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC-CceeeccChhhHHHHHHHHCCCCc
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGF-DDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..++++++||-.|+ |..|..+..+++..+.+|++++.+++..+.+++.   .|. ..++..+.. .    +..+.++.|
T Consensus        51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~----~~~~~~~~f  124 (230)
T 3evz_A           51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-I----IKGVVEGTF  124 (230)
T ss_dssp             TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-S----STTTCCSCE
T ss_pred             hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-h----hhhcccCce
Confidence            44689999999993 4367777777777688999999999988887632   343 122221100 0    111222479


Q ss_pred             cEEEcCcc--------------------------hhHHHHHHHccccCcEEEEE
Q 027106          110 DIYFDNVG--------------------------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       110 d~vld~~g--------------------------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      |+|+....                          ...+..+.+.|+++|+++.+
T Consensus       125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            99985421                          23677788899999999885

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.22  E-value=0.0031  Score=49.48  Aligned_cols=90  Identities=13%  Similarity=0.079  Sum_probs=63.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .+|.|+| .|.+|...++.++..|.  +|+++++++++.+.+. +.|.......+.. +.  .+     ...|+||-|+.
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~~~-~~--~~-----~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA-KV--ED-----FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCTT-GG--GG-----GCCSEEEECSC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCCHH-HH--hh-----ccCCEEEEeCC
Confidence            6899999 59999999999999998  9999999999988888 8886321111111 10  11     24799998887


Q ss_pred             hh----HHHHHHHccccCcEEEEEee
Q 027106          118 AE----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~~----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..    .+......++++..++.+++
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCC
Confidence            64    34445556677776666654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.21  E-value=0.0014  Score=52.24  Aligned_cols=97  Identities=12%  Similarity=0.096  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHh-CCCc-eee-ccChhhHHHHHHHHCCCCccEEE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV--TLLKDKL-GFDD-AFN-YKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~~-g~~~-~~~-~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++++.  +.+. .. +... ..| ..+.+++.+.+     .++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~-----~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLF-----EGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHH-----TTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHH-----hcCCEEE
Confidence            56899999999999999988888899999999876653  2233 22 2221 123 33331233222     2589999


Q ss_pred             cCcchh------HHHHHHHcccc-C--cEEEEEeeec
Q 027106          114 DNVGAE------MQEAAIANMNT-Y--GRVAVCGVIS  141 (228)
Q Consensus       114 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~  141 (228)
                      .+++..      ....+++.++. +  +++|.+++..
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            766431      22344444443 3  5899888653

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=97.21  E-value=0.0012  Score=51.98  Aligned_cols=98  Identities=16%  Similarity=0.152  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC------CceeeccChhhHHHHHHHHCCCCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF------DDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      .++.+||..|  +|.|..+..+++..+ .+|++++.+++..+.+++.+..      ..-+..... +..+.+.. .++.|
T Consensus       115 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEE--CTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH-CCSCE
T ss_pred             CCCCEEEEEc--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-cHHHHHhh-cCCCc
Confidence            4568999999  555777777877654 6999999999999998844432      111111112 33333332 23479


Q ss_pred             cEEEcCc----c-------hhHHHHHHHccccCcEEEEEe
Q 027106          110 DIYFDNV----G-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       110 d~vld~~----g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+|+...    +       ...++.+.+.|+++|.++.-.
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            9988322    1       246788889999999998853

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=97.21  E-value=0.0013  Score=50.54  Aligned_cols=97  Identities=16%  Similarity=0.079  Sum_probs=67.8

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      -+||........|.....--.|.+++|.|++..+|.-+++++...|++|+++.+...                     ++
T Consensus       138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L  196 (288)
T 1b0a_A          138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NL  196 (288)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CH
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            345555555555644443458999999998667899999999999999999864321                     33


Q ss_pred             HHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           98 KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.+++     .|+|+.++|.+.+ ---++++++..++.+|.+.
T Consensus       197 ~~~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          197 RHHVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             HHHhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence            334443     7999999987532 1124578899999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.21  E-value=0.00066  Score=53.77  Aligned_cols=69  Identities=17%  Similarity=0.208  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++++.+       .+... ..|..+...+.+.+.     ++|+|+.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEEC
Confidence            467799999999999999999999999999999987544       12222 134444322333222     68999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      ++
T Consensus        85 A~   86 (347)
T 4id9_A           85 GA   86 (347)
T ss_dssp             CC
T ss_pred             Cc
Confidence            76

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=97.20  E-value=0.0009  Score=52.27  Aligned_cols=99  Identities=15%  Similarity=0.149  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-------CCceeeccChhhHHHHHHHHCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG-------FDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+.+||+.|  +|.|..+..+++..+ .+|++++.+++..+.+++.+.       ... +..... +..+.+.. .+
T Consensus        92 ~~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~r-v~v~~~-Da~~~l~~-~~  166 (304)
T 2o07_A           92 SHPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSK-LTLHVG-DGFEFMKQ-NQ  166 (304)
T ss_dssp             TSSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTT-EEEEES-CHHHHHHT-CS
T ss_pred             hCCCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCc-EEEEEC-cHHHHHhh-CC
Confidence            345678999999  566777778887654 599999999998888884331       111 111111 33333332 23


Q ss_pred             CCccEEEc-Ccc----------hhHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYFD-NVG----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vld-~~g----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.||+|+. ...          ...++.+.++|+++|.++.-.
T Consensus       167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            47999884 322          136888899999999998854

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.20  E-value=0.00059  Score=54.57  Aligned_cols=75  Identities=11%  Similarity=0.163  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHh-------CCC-c--eeeccChhhHHHHHHHHCC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV--TLLKDKL-------GFD-D--AFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~~-------g~~-~--~~~~~~~~~~~~~~~~~~~  106 (228)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+.  +.+. .+       +.. .  ..|..+.+.+.+.+...  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc--
Confidence            35899999999999999988888899999999875431  2222 11       111 1  12344332333333332  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                       ++|+||++++
T Consensus        78 -~~d~vih~A~   87 (372)
T 1db3_A           78 -QPDEVYNLGA   87 (372)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             5899999876

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.20  E-value=0.00079  Score=53.60  Aligned_cols=91  Identities=21%  Similarity=0.227  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|+| .|.+|...++.++..|++|++.++++...+.+. +.|...+   .   ++.+.+.     ..|+|+.++
T Consensus       162 l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~l~ell~-----~aDvV~l~~  228 (351)
T 3jtm_A          162 LEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV---E---DLNEMLP-----KCDVIVINM  228 (351)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC---S---CHHHHGG-----GCSEEEECS
T ss_pred             ccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc---C---CHHHHHh-----cCCEEEECC
Confidence            3688999999 599999999999999999999998765556666 6776332   1   2232332     378888877


Q ss_pred             ch-h-----HHHHHHHccccCcEEEEEeee
Q 027106          117 GA-E-----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       117 g~-~-----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +. +     .-...+..|++++.++.++..
T Consensus       229 Plt~~t~~li~~~~l~~mk~gailIN~aRG  258 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKGVLIVNNARG  258 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             CCCHHHHHhhcHHHHhcCCCCCEEEECcCc
Confidence            63 1     235677889999999888753

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=97.19  E-value=0.0031  Score=49.48  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCcee-eccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDK---LGFDDAF-NYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~~-~~~~~~~~~~~~~~~~  105 (228)
                      ....+++|++||-.|  .|.|..++++++.++  .+|++++.++.+.+.+++.   +|...+. ...+..++.    . .
T Consensus       112 ~~l~~~~g~~VLDlg--~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~----~-~  184 (315)
T 1ixk_A          112 VALDPKPGEIVADMA--AAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG----E-L  184 (315)
T ss_dssp             HHHCCCTTCEEEECC--SSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG----G-G
T ss_pred             HHhCCCCCCEEEEeC--CCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc----c-c
Confidence            445789999999888  345666777787763  6999999999988887643   4654321 111111111    1 1


Q ss_pred             CCCccEEEc---Ccc--------------------------hhHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFD---NVG--------------------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld---~~g--------------------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+.||+|+-   |+|                          ...+..+.+.|++||+++...
T Consensus       185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence            347999874   332                          145677889999999998754

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=97.19  E-value=0.0013  Score=49.77  Aligned_cols=99  Identities=10%  Similarity=0.021  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH-HCCCCcc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR-YFPDGID  110 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~-~~~~~~d  110 (228)
                      +.++.+||=.|  +|.|..++.+++.. +.+|++++.+++..+.+++   ++|...+-... . +..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG--~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~-~-d~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLG--TGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALW-G-RAEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEET--CTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE-C-CHHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEE-C-cHHHhhcccccCCCce
Confidence            35788999998  45666667777765 5699999999998887763   35654322111 1 22222111 1124799


Q ss_pred             EEEcCc-c--hhHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNV-G--AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~-g--~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+... .  ...+..+.+.|++||+++.+-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            998643 2  247778889999999998864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.18  E-value=0.00049  Score=55.08  Aligned_cols=75  Identities=16%  Similarity=0.152  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCc-eeecc-ChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYK-EETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+.+|||+||+|.+|..+++.+... |.+|++++++.++.+.+.+..+... ..|.. +.+.+.+.+.     ++|+||+
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEE
Confidence            3579999999999999999888877 8999999988766544331122222 12444 3313333333     5899999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      +++
T Consensus        98 ~A~  100 (372)
T 3slg_A           98 LVA  100 (372)
T ss_dssp             CBC
T ss_pred             cCc
Confidence            877

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=97.18  E-value=0.0006  Score=53.90  Aligned_cols=89  Identities=9%  Similarity=0.033  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++..|++|++.++++.+.+... .+|...    .   ++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQ----V---ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCcee----C---CHHHHHhh-----CCEEEEcCC
Confidence            578999999 599999999999999999999998764445555 666522    1   22223332     688887766


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEeee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      . +     .-...+..|++++.++.++..
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            2 1     224677888998888888753

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.18  E-value=0.0014  Score=51.35  Aligned_cols=88  Identities=17%  Similarity=0.144  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|+| .|.+|...++.++..|++|++.++++++. .+. +.|... .      +..+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~-~------~l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA-V------SLEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE-C------CHHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee-c------CHHHHHh-----hCCEEEEec
Confidence            4678999999 59999999999999999999999877663 355 677642 1      2222333     269998887


Q ss_pred             ch-h----HH-HHHHHccccCcEEEEEee
Q 027106          117 GA-E----MQ-EAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~-~----~~-~~~~~~l~~~G~~v~~g~  139 (228)
                      +. +    .+ ...+..+++++.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            63 2    22 567788999999999876

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.18  E-value=0.0013  Score=49.09  Aligned_cols=77  Identities=10%  Similarity=0.145  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHH
Q 027106           38 KGEKVFVSAA----------------SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAAL  101 (228)
Q Consensus        38 ~g~~VlI~ga----------------~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  101 (228)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.+.... .... ..| ..+++....+++...+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~~-~~~-~~~~~v~s~~em~~~v   78 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPEP-HPN-LSIREITNTKDLLIEM   78 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCCC-CTT-EEEEECCSHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cccC-CCC-eEEEEHhHHHHHHHHH
Confidence            5889999999                7889999999999999999999976421 1000 012 2344544443555666


Q ss_pred             HHHCCCCccEEEcCcch
Q 027106          102 KRYFPDGIDIYFDNVGA  118 (228)
Q Consensus       102 ~~~~~~~~d~vld~~g~  118 (228)
                      .+.. +++|+++.+++-
T Consensus        79 ~~~~-~~~Dili~aAAv   94 (232)
T 2gk4_A           79 QERV-QDYQVLIHSMAV   94 (232)
T ss_dssp             HHHG-GGCSEEEECSBC
T ss_pred             HHhc-CCCCEEEEcCcc
Confidence            5544 369999998873

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.17  E-value=0.0035  Score=48.19  Aligned_cols=89  Identities=15%  Similarity=0.116  Sum_probs=61.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~  116 (228)
                      .+|.|+| .|.+|.+.++.++..|.  +|+++++++++.+.++ +.|...... .+.   .+.+     . ..|+|+.|+
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~-~~~---~~~~-----~~~aDvVilav   70 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGT-TSI---AKVE-----DFSPDFVMLSS   70 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEE-SCG---GGGG-----GTCCSEEEECS
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCccccc-CCH---HHHh-----cCCCCEEEEcC
Confidence            3789999 59999999998888887  9999999999988887 788642111 111   1111     2 479999998


Q ss_pred             chh----HHHHHHHccccCcEEEEEee
Q 027106          117 GAE----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~~----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ...    .+......++++..++.+++
T Consensus        71 p~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           71 PVRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            864    33334455667776666553

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.17  E-value=0.00016  Score=56.54  Aligned_cols=115  Identities=18%  Similarity=0.092  Sum_probs=72.6

Q ss_pred             hccchhHHHHHHHHHHh--------cC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC
Q 027106           17 GILGFSGLTAYAGLFEI--------GK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFD   86 (228)
Q Consensus        17 a~l~~~~~ta~~~l~~~--------~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~   86 (228)
                      .-+||....+...+.+.        .+ --.|.+++|.|++.-+|..+++++...|++|+++.++..+. +... +++..
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~  224 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLN  224 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhh
Confidence            34566666666666442        23 34789999999744679999999999999999888763321 1111 23321


Q ss_pred             -cee-e---ccChhhHHHHHHHHCCCCccEEEcCcchhH--HHHHHHccccCcEEEEEeee
Q 027106           87 -DAF-N---YKEETDLKAALKRYFPDGIDIYFDNVGAEM--QEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus        87 -~~~-~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~--~~~~~~~l~~~G~~v~~g~~  140 (228)
                       +.. .   .+.. ++.+.+++     .|+|+.++|.+.  +..  ++++++..++.+|.+
T Consensus       225 ~~~~t~~~~t~~~-~L~e~l~~-----ADIVIsAtg~p~~vI~~--e~vk~GavVIDVgi~  277 (320)
T 1edz_A          225 KHHVEDLGEYSED-LLKKCSLD-----SDVVITGVPSENYKFPT--EYIKEGAVCINFACT  277 (320)
T ss_dssp             CCEEEEEEECCHH-HHHHHHHH-----CSEEEECCCCTTCCBCT--TTSCTTEEEEECSSS
T ss_pred             cccccccccccHh-HHHHHhcc-----CCEEEECCCCCcceeCH--HHcCCCeEEEEcCCC
Confidence             111 0   1112 56666654     899999999752  322  347888888888864

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.17  E-value=0.00038  Score=55.42  Aligned_cols=77  Identities=14%  Similarity=0.159  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-CCCceeeccChhhHHHHHHHH-CCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKL-GFDDAFNYKEETDLKAALKRY-FPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vld  114 (228)
                      ++.+|||+||+|.+|..+++.+...| .+|++++++..... .. .+ +.....|..+. +....+.+. ..+++|+||+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~d~Vih  121 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE-DFLIQIMAGEEFGDVEAIFH  121 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH-HHHHHHHTTCCCSSCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH-HHHHHHHhhcccCCCCEEEE
Confidence            45789999999999999999888889 89999987654321 11 22 11211233332 222222211 1126999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      +++
T Consensus       122 ~A~  124 (357)
T 2x6t_A          122 EGA  124 (357)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            887

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.17  E-value=0.0018  Score=51.56  Aligned_cols=88  Identities=20%  Similarity=0.291  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...++.++..|++|++.+++... +.+. +.|...+   .   ++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~---~---~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSK-ERAR-ADGFAVA---E---SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHH-hcCceEe---C---CHHHHHhh-----CCEEEEecc
Confidence            578999999 5999999999999999999999977533 4455 6676321   1   33333333     689888775


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|++++.++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            2 2     23467889999999999884

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.16  E-value=0.0069  Score=44.67  Aligned_cols=91  Identities=12%  Similarity=-0.031  Sum_probs=60.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+.+..|...+. |..+.    +.+.+..-.++|+++-+++.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~----~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHK----EILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSH----HHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCH----HHHHhcCcccCCEEEEecCCc
Confidence            5899996 99999999999999999999999999988776356653322 22222    233333223689999999875


Q ss_pred             HHH----HHHHccccCcEEEE
Q 027106          120 MQE----AAIANMNTYGRVAV  136 (228)
Q Consensus       120 ~~~----~~~~~l~~~G~~v~  136 (228)
                      ...    ...+.+.+..+++.
T Consensus        77 ~~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           77 EVNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEE
T ss_pred             HHHHHHHHHHHHHcCCCeEEE
Confidence            322    22233344455555

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.16  E-value=0.0022  Score=49.22  Aligned_cols=89  Identities=10%  Similarity=0.185  Sum_probs=62.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++.+.+.+. ..+...+ .|..+. +         -.++|+||++++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-S---------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-C---------CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-c---------cCCCCEEEECCCc
Confidence            58999997 99999999999888999999999988877766 5554322 222221 1         2379999999863


Q ss_pred             -----hHHHHHHHcccc----CcEEEEEeee
Q 027106          119 -----EMQEAAIANMNT----YGRVAVCGVI  140 (228)
Q Consensus       119 -----~~~~~~~~~l~~----~G~~v~~g~~  140 (228)
                           +.....++.++.    -.+++.+++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence                 233444444433    2688887764

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=97.15  E-value=0.0032  Score=48.27  Aligned_cols=97  Identities=15%  Similarity=0.187  Sum_probs=66.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ....+.++.+||-.|  .|.|..+..+++ .+.+|++++.++...+.+++.+....+...+.. ++     . .++.||+
T Consensus        51 ~~l~~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~-----~-~~~~fD~  120 (279)
T 3ccf_A           51 QLLNPQPGEFILDLG--CGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYPHLHFDVADAR-NF-----R-VDKPLDA  120 (279)
T ss_dssp             HHHCCCTTCEEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTT-TC-----C-CSSCEEE
T ss_pred             HHhCCCCCCEEEEec--CCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCCCCEEEECChh-hC-----C-cCCCcCE
Confidence            344567899999998  456777777777 788999999999998888844322122221111 11     0 1247999


Q ss_pred             EEcCcc-----h--hHHHHHHHccccCcEEEEEe
Q 027106          112 YFDNVG-----A--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       112 vld~~g-----~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+....     .  ..+..+.+.|+|||+++...
T Consensus       121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            986432     1  37888899999999998754

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=97.15  E-value=0.0012  Score=48.92  Aligned_cols=99  Identities=13%  Similarity=0.135  Sum_probs=63.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCC-Cce--eeccChhhHHHHHHHHCCCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGF-DDA--FNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~-~~~--~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ..++++++||-.|+  |.|..+..+++..|  .+|++++.+++..+.+++.... ..+  +..+.. +.. ... ..++.
T Consensus        69 ~~~~~~~~vLDlG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~-~~~-~~~-~~~~~  143 (227)
T 1g8a_A           69 FPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT-KPE-EYR-ALVPK  143 (227)
T ss_dssp             CCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT-CGG-GGT-TTCCC
T ss_pred             cCCCCCCEEEEEec--cCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCC-Ccc-hhh-cccCC
Confidence            34789999999993  44888888888764  6999999999777666533321 111  111110 100 000 11237


Q ss_pred             ccEEEcCcchh----H-HHHHHHccccCcEEEEE
Q 027106          109 IDIYFDNVGAE----M-QEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vld~~g~~----~-~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+.....+    . +..+.+.|+|||+++..
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            99998655432    3 78889999999999987

>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*

Probab=97.15  E-value=0.0024  Score=49.31  Aligned_cols=99  Identities=11%  Similarity=-0.062  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC------CceeeccChhhHHHHHHHH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF------DDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~------~~~~~~~~~~~~~~~~~~~  104 (228)
                      ....++.+||=.|  .|.|..+..+++. |++|++++.++...+.+++..   +.      -.+...+.. ++...+  .
T Consensus        53 l~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~--~  126 (293)
T 3thr_A           53 LRQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDV--P  126 (293)
T ss_dssp             HHHTTCCEEEETT--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHS--C
T ss_pred             hcccCCCEEEEec--CCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCcccc--c
Confidence            3446788999988  5557777777775 789999999999888887332   11      111111111 222111  2


Q ss_pred             CCCCccEEEcC---cc------------hhHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYFDN---VG------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vld~---~g------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.||+|+..   ..            ...+..+.++|+|||.++..-
T Consensus       127 ~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  175 (293)
T 3thr_A          127 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH  175 (293)
T ss_dssp             CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence            23489999854   11            137788899999999998754

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=97.15  E-value=0.00082  Score=52.75  Aligned_cols=97  Identities=18%  Similarity=0.135  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC--------CCceeeccChhhHHHHHHHHCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG--------FDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ..+.+||+.|  +|.|..+..+++..+ .+|++++.+++..+.+++.+.        ... +..... +..+.+.. ..+
T Consensus        76 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~-v~~~~~-D~~~~l~~-~~~  150 (314)
T 1uir_A           76 PEPKRVLIVG--GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPR-AVLVID-DARAYLER-TEE  150 (314)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTT-EEEEES-CHHHHHHH-CCC
T ss_pred             CCCCeEEEEc--CCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCc-eEEEEc-hHHHHHHh-cCC
Confidence            4668999999  566777778887654 599999999998888874331        112 111112 33333333 344


Q ss_pred             CccEEEcCc-------c-------hhHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNV-------G-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~-------g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .||+|+...       +       ...++.+.+.|+++|.++...
T Consensus       151 ~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          151 RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             CEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            799987422       1       236888899999999998853

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.14  E-value=0.0056  Score=44.86  Aligned_cols=90  Identities=14%  Similarity=0.062  Sum_probs=59.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|+|+||+|.+|...+..+...|.+|+++++++++.+.+.+.++.    .. +..  . +..+.+.     +.|+|+.|+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~-----~~D~Vi~~~   72 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS-ITG--M-KNEDAAE-----ACDIAVLTI   72 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC-EEE--E-EHHHHHH-----HCSEEEECS
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC-CCh--h-hHHHHHh-----cCCEEEEeC
Confidence            689999779999998888888899999999998887766634441    11 111  1 3333333     379999999


Q ss_pred             chhHHHHHHHccc---cCcEEEEEee
Q 027106          117 GAEMQEAAIANMN---TYGRVAVCGV  139 (228)
Q Consensus       117 g~~~~~~~~~~l~---~~G~~v~~g~  139 (228)
                      ........++.+.   ++..++.+..
T Consensus        73 ~~~~~~~~~~~l~~~~~~~~vi~~~~   98 (212)
T 1jay_A           73 PWEHAIDTARDLKNILREKIVVSPLV   98 (212)
T ss_dssp             CHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred             ChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence            8754444443222   3445555543

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=97.12  E-value=0.0041  Score=44.52  Aligned_cols=94  Identities=14%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +.++.+||-.|+  |.|..+..+++. +.++++++.++...+.+++.+....++..+.. +.     ....+.+|+|+..
T Consensus        44 ~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~-~~-----~~~~~~~D~i~~~  114 (195)
T 3cgg_A           44 APRGAKILDAGC--GQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFPEARWVVGDLS-VD-----QISETDFDLIVSA  114 (195)
T ss_dssp             SCTTCEEEEETC--TTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTSEEEECCTT-TS-----CCCCCCEEEEEEC
T ss_pred             ccCCCeEEEECC--CCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccc-cC-----CCCCCceeEEEEC
Confidence            678999999993  467777777776 88999999999998888833322222222111 11     1112479999864


Q ss_pred             c---c-------hhHHHHHHHccccCcEEEEEe
Q 027106          116 V---G-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~---g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .   .       ...+..+.+.|+++|+++..-
T Consensus       115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~  147 (195)
T 3cgg_A          115 GNVMGFLAEDGREPALANIHRALGADGRAVIGF  147 (195)
T ss_dssp             CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            1   1       136778889999999998754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.12  E-value=0.0019  Score=52.21  Aligned_cols=39  Identities=15%  Similarity=0.079  Sum_probs=31.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      ...+.+|||+||+|-+|..++..+...|.+|+++++...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            467889999999999999999888888999999987643

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=97.11  E-value=0.0007  Score=47.78  Aligned_cols=96  Identities=8%  Similarity=-0.086  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ..+.++.+||-.|  .|.|..+..+++... +|++++.+++..+.++ +... . +..... +     .....+.+|+|+
T Consensus        13 ~~~~~~~~vLDiG--~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~-~~~~-~-v~~~~~-d-----~~~~~~~~D~v~   80 (170)
T 3i9f_A           13 IFEGKKGVIVDYG--CGNGFYCKYLLEFAT-KLYCIDINVIALKEVK-EKFD-S-VITLSD-P-----KEIPDNSVDFIL   80 (170)
T ss_dssp             HHSSCCEEEEEET--CTTCTTHHHHHTTEE-EEEEECSCHHHHHHHH-HHCT-T-SEEESS-G-----GGSCTTCEEEEE
T ss_pred             cCcCCCCeEEEEC--CCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHH-HhCC-C-cEEEeC-C-----CCCCCCceEEEE
Confidence            3578899999999  345777777777664 9999999999999988 4422 1 111122 3     222234799998


Q ss_pred             cCcc-------hhHHHHHHHccccCcEEEEEeeec
Q 027106          114 DNVG-------AEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       114 d~~g-------~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ....       ...+..+.+.|+++|+++......
T Consensus        81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  115 (170)
T 3i9f_A           81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK  115 (170)
T ss_dssp             EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred             EccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence            5332       137788999999999999986543

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=97.11  E-value=0.0069  Score=49.94  Aligned_cols=101  Identities=20%  Similarity=0.218  Sum_probs=65.5

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...+++|++||=.|+  +.|..++++|..++  .+|++++.++.+.+.+++   ++|...+.....  +....... .++
T Consensus       100 ~L~~~~g~~VLDlca--GpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~--Da~~l~~~-~~~  174 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCA--APGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH--APAELVPH-FSG  174 (456)
T ss_dssp             HHCCCTTCEEEESSC--TTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC--CHHHHHHH-HTT
T ss_pred             HcCCCCCCEEEEECC--CcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC--CHHHhhhh-ccc
Confidence            346789999998873  34555666666653  499999999998887763   467654332221  22222111 234


Q ss_pred             CccEEEc---Ccch--------------------------hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFD---NVGA--------------------------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .||+|+-   |+|.                          ..+..++++|++||+++...
T Consensus       175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT  234 (456)
T 3m4x_A          175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST  234 (456)
T ss_dssp             CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            7999874   4332                          34677888999999998644

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=97.11  E-value=0.0071  Score=44.70  Aligned_cols=97  Identities=10%  Similarity=-0.005  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHHC-CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRYF-PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~v  112 (228)
                      ++.+||=.|  .|.|..++.+|+.. +.+|++++.++...+.+++.   .|...+- .-.. +..+.+.... ++.+|.|
T Consensus        34 ~~~~vLDiG--cG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~-~~~~-Da~~~l~~~~~~~~~d~v  109 (218)
T 3dxy_A           34 EAPVTLEIG--FGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLR-VMCH-DAVEVLHKMIPDNSLRMV  109 (218)
T ss_dssp             CCCEEEEES--CTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEE-EECS-CHHHHHHHHSCTTCEEEE
T ss_pred             CCCeEEEEe--eeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEE-EEEC-CHHHHHHHHcCCCChheE
Confidence            677888888  67788888888876 46999999999988776632   4544422 2222 4444444333 3478988


Q ss_pred             EcCcch---------------hHHHHHHHccccCcEEEEEe
Q 027106          113 FDNVGA---------------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       113 ld~~g~---------------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +-....               ..+..+.+.|+|||.++...
T Consensus       110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t  150 (218)
T 3dxy_A          110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT  150 (218)
T ss_dssp             EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence            754221               26788889999999988864

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=97.10  E-value=0.0021  Score=47.31  Aligned_cols=95  Identities=18%  Similarity=0.115  Sum_probs=64.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG-FDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ....++.+||-.|  .|.|..+..+++. +.+|++++.+++..+.+++.+. ...++..+-. ++     . ..+.+|+|
T Consensus        41 ~~~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~-~~-----~-~~~~fD~v  110 (220)
T 3hnr_A           41 VVNKSFGNVLEFG--VGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFL-SF-----E-VPTSIDTI  110 (220)
T ss_dssp             HHHTCCSEEEEEC--CTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSS-SC-----C-CCSCCSEE
T ss_pred             hhccCCCeEEEeC--CCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChh-hc-----C-CCCCeEEE
Confidence            3456889999999  4557777777765 8899999999999998884444 1122211111 11     0 11479999


Q ss_pred             EcCcc-----hh----HHHHHHHccccCcEEEEEe
Q 027106          113 FDNVG-----AE----MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       113 ld~~g-----~~----~~~~~~~~l~~~G~~v~~g  138 (228)
                      +....     .+    .+..+.+.|+|+|.++...
T Consensus       111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            86432     21    6788889999999999875

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=97.10  E-value=0.003  Score=47.65  Aligned_cols=98  Identities=10%  Similarity=0.038  Sum_probs=67.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ....+.++.+||-.|  .|.|..+..+++.. +.+|++++.++...+.+++......++..+.. ++    .  .++.||
T Consensus        27 ~~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~~----~--~~~~fD   97 (259)
T 2p35_A           27 AQVPLERVLNGYDLG--CGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLA-TW----K--PAQKAD   97 (259)
T ss_dssp             TTCCCSCCSSEEEET--CTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTT-TC----C--CSSCEE
T ss_pred             HhcCCCCCCEEEEec--CcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChh-hc----C--ccCCcC
Confidence            556678899999999  45677777887776 67999999999999988833221222221111 11    0  123799


Q ss_pred             EEEcCcc-------hhHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNVG-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|+....       ...+..+.+.|+|||+++...
T Consensus        98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           98 LLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             EEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            9986442       136778889999999998865

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=97.09  E-value=0.0032  Score=51.30  Aligned_cols=101  Identities=9%  Similarity=0.050  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ....+.++.+||-.|+  |.|..+..+++ .|.+|++++.+++..+.++ +.+.......-.. +....+. ...+.||+
T Consensus       101 ~~~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~-~~~~~~~~~~~~~-~~~~~l~-~~~~~fD~  174 (416)
T 4e2x_A          101 ATELTGPDPFIVEIGC--NDGIMLRTIQE-AGVRHLGFEPSSGVAAKAR-EKGIRVRTDFFEK-ATADDVR-RTEGPANV  174 (416)
T ss_dssp             HTTTCSSSCEEEEETC--TTTTTHHHHHH-TTCEEEEECCCHHHHHHHH-TTTCCEECSCCSH-HHHHHHH-HHHCCEEE
T ss_pred             HHhCCCCCCEEEEecC--CCCHHHHHHHH-cCCcEEEECCCHHHHHHHH-HcCCCcceeeech-hhHhhcc-cCCCCEEE
Confidence            4456788999999993  44666666665 5889999999999999988 6665443222111 2222222 12347999


Q ss_pred             EEcCcc-------hhHHHHHHHccccCcEEEEEe
Q 027106          112 YFDNVG-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       112 vld~~g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+....       ...+..+.++|+|+|.++...
T Consensus       175 I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~  208 (416)
T 4e2x_A          175 IYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED  208 (416)
T ss_dssp             EEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            985432       137888999999999999753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.09  E-value=0.00055  Score=55.07  Aligned_cols=74  Identities=16%  Similarity=0.191  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..+..... ..+... ..|..+.+.+.+.+     .++|+||+++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~-----~~~d~Vih~A  101 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVT-----EGVDHVFNLA  101 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHh-----CCCCEEEECc
Confidence            3568999999999999999988888999999998754422111 112221 12444331233222     2699999988


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      +
T Consensus       102 ~  102 (379)
T 2c5a_A          102 A  102 (379)
T ss_dssp             C
T ss_pred             e
Confidence            6

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.09  E-value=0.0017  Score=49.93  Aligned_cols=59  Identities=8%  Similarity=0.136  Sum_probs=43.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|.+|..+++.+...|.+|+++++.+               .|..+.+.+.+.+.+.   ++|+|+++++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~   65 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAA   65 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCc
Confidence            799999999999999998888899999999721               2233332334444332   5899998876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.08  E-value=0.0011  Score=51.04  Aligned_cols=64  Identities=9%  Similarity=0.149  Sum_probs=44.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      -++..+|||+||+|.+|..+++.+...|.+|++++++.               .|..+.+.+.+.+...   ++|+||++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~   70 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC   70 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence            35667999999999999999998888899999998751               2233332333333322   58999988


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      ++
T Consensus        71 A~   72 (292)
T 1vl0_A           71 AA   72 (292)
T ss_dssp             CC
T ss_pred             Cc
Confidence            76

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=97.08  E-value=0.0037  Score=50.05  Aligned_cols=118  Identities=16%  Similarity=0.127  Sum_probs=72.1

Q ss_pred             hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC----HHH----HHHHHHHhCCC
Q 027106           16 VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS----KEK----VTLLKDKLGFD   86 (228)
Q Consensus        16 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~----~~~----~~~~~~~~g~~   86 (228)
                      ..+....+..-+.++...++--++.+|+|.|| |..|..+++++..+|+ +|++++++    .++    +...++.+...
T Consensus       169 qGTasV~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~  247 (388)
T 1vl6_A          169 QGTAVVVSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARI  247 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHh
Confidence            33344444444555533343336679999996 9999999999999999 89999987    444    22222122111


Q ss_pred             ceeeccChhhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeee
Q 027106           87 DAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .-...... ++.+.++     +.|++|-+++.. .-++.++.|+++-.++.++.+
T Consensus       248 ~~~~~~~~-~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNP  296 (388)
T 1vl6_A          248 TNPERLSG-DLETALE-----GADFFIGVSRGNILKPEWIKKMSRKPVIFALANP  296 (388)
T ss_dssp             SCTTCCCS-CHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSS
T ss_pred             hhccCchh-hHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCC
Confidence            00001112 5555554     379999887743 456677888887766666653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.08  E-value=0.0005  Score=53.55  Aligned_cols=74  Identities=14%  Similarity=0.094  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +.+|||+||+|.+|..+++.+...  |.+|++++++..+.+...   +... ..|..+.+.+.+.+.+.   ++|+||++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~   75 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLM   75 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEEC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEEC
Confidence            468999999999999999877777  789999988765433222   2322 12444432333333321   68999999


Q ss_pred             cch
Q 027106          116 VGA  118 (228)
Q Consensus       116 ~g~  118 (228)
                      ++.
T Consensus        76 a~~   78 (312)
T 2yy7_A           76 AAL   78 (312)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.08  E-value=0.00023  Score=55.69  Aligned_cols=37  Identities=11%  Similarity=0.128  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            3679999999999999999998888999999998754

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=97.08  E-value=0.0025  Score=48.06  Aligned_cols=106  Identities=15%  Similarity=0.161  Sum_probs=68.6

Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH
Q 027106           26 AYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        26 a~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      .+..+.......++.+||-.|  .|.|..+..+++. |. +|++++.+++..+.+++......+ ..... ++.+ + ..
T Consensus        32 ~~~~l~~~~~~~~~~~vLD~G--cG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~-d~~~-~-~~  104 (253)
T 3g5l_A           32 EWHELKKMLPDFNQKTVLDLG--CGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVV-CYEQK-AIED-I-AI  104 (253)
T ss_dssp             HHHHHHTTCCCCTTCEEEEET--CTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTE-EEEEC-CGGG-C-CC
T ss_pred             hHHHHHHhhhccCCCEEEEEC--CCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCe-EEEEc-chhh-C-CC
Confidence            344444545566899999999  4457777777776 55 999999999999998844432221 11111 1110 0 11


Q ss_pred             CCCCccEEEcCcc-------hhHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYFDNVG-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vld~~g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+.||+|+....       ...+..+.+.|++||+++..-
T Consensus       105 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  145 (253)
T 3g5l_A          105 EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSV  145 (253)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence            1247999986432       137788899999999998853

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=97.08  E-value=0.0043  Score=47.54  Aligned_cols=90  Identities=17%  Similarity=0.098  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .+..+.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++..  +.. +. .         ...+|+|+
T Consensus       115 ~~~~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~-~~-~---------~~~~DivI  180 (271)
T 1npy_A          115 HLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN-SL-E---------NQQADILV  180 (271)
T ss_dssp             TCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES-CC-T---------TCCCSEEE
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch-hh-h---------cccCCEEE
Confidence            3446789999995 9999999988888998 8999999988877666577641  111 11 0         12589999


Q ss_pred             cCcchhHH--------HHHHHccccCcEEEEEe
Q 027106          114 DNVGAEMQ--------EAAIANMNTYGRVAVCG  138 (228)
Q Consensus       114 d~~g~~~~--------~~~~~~l~~~G~~v~~g  138 (228)
                      +|++....        ......+.++..++.+-
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv  213 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV  213 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEee
Confidence            99875321        11123455666666654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.07  E-value=0.00086  Score=53.73  Aligned_cols=91  Identities=11%  Similarity=0.058  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCY-VVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      -.|.+|.|+| .|.+|...++.++..|++ |++.+++..+.+.+. ++|+..+   .   ++.+.+.     ..|+|+.+
T Consensus       162 l~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~-----~aDvV~l~  228 (364)
T 2j6i_A          162 IEGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV---E---NIEELVA-----QADIVTVN  228 (364)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC---S---SHHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec---C---CHHHHHh-----cCCEEEEC
Confidence            3688999999 599999999999999996 999998765555555 6775321   1   2222332     37898887


Q ss_pred             cchh-----HH-HHHHHccccCcEEEEEeee
Q 027106          116 VGAE-----MQ-EAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       116 ~g~~-----~~-~~~~~~l~~~G~~v~~g~~  140 (228)
                      ++..     .+ ...+..|++++.++.++..
T Consensus       229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          229 APLHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCCChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            7641     22 4567888999888888764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=97.06  E-value=0.0024  Score=60.68  Aligned_cols=81  Identities=22%  Similarity=0.181  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEE-eCCHHHHHHHH----HHh---CCCc---eeeccChhhHHHHHHHH
Q 027106           37 KKGEKVFVSAASGS-VGHLVGQYAKLFGCYVVGS-AGSKEKVTLLK----DKL---GFDD---AFNYKEETDLKAALKRY  104 (228)
Q Consensus        37 ~~g~~VlI~ga~g~-~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~----~~~---g~~~---~~~~~~~~~~~~~~~~~  104 (228)
                      -.|+++||+||+++ +|.++++.+...|++|+++ .++.++.+.+.    +++   |...   ..|..+.+++...+.+.
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            36889999999998 9999999888899999998 45555543322    133   3211   23555443444334332


Q ss_pred             C-------CC-CccEEEcCcc
Q 027106          105 F-------PD-GIDIYFDNVG  117 (228)
Q Consensus       105 ~-------~~-~~d~vld~~g  117 (228)
                      .       -+ .+|++|+++|
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCC
T ss_pred             HHhccccccCCCCeEEEECCC
Confidence            1       13 6999999887

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=97.06  E-value=0.0022  Score=48.49  Aligned_cols=96  Identities=7%  Similarity=0.038  Sum_probs=64.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-C-CCce-eeccChhhHHHHHHHHCCCCcc
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL-G-FDDA-FNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~-g-~~~~-~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..+.++.+||-.|+  |.|..+..+++. +.+|++++.++...+.+++.+ + ...+ +...+..++     ....+.||
T Consensus        35 ~~~~~~~~vLDiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD  106 (263)
T 2yqz_A           35 HPKGEEPVFLELGV--GTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI-----PLPDESVH  106 (263)
T ss_dssp             CCSSSCCEEEEETC--TTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC-----CSCTTCEE
T ss_pred             cCCCCCCEEEEeCC--cCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC-----CCCCCCee
Confidence            36788999999993  447677777765 789999999999999888443 1 1111 111111011     01123799


Q ss_pred             EEEcCcc-------hhHHHHHHHccccCcEEEEE
Q 027106          111 IYFDNVG-------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       111 ~vld~~g-------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+....       ...+..+.+.|+|||.++..
T Consensus       107 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          107 GVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            9986433       23788889999999999886

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.06  E-value=0.0025  Score=47.33  Aligned_cols=95  Identities=9%  Similarity=-0.027  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      -.|.+|||.|| |.+|...++.+...|++|++++.... .++.+. +.|.-..+...-. .     ..  -.++|+||-+
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~-~~~~i~~i~~~~~-~-----~d--L~~adLVIaA   98 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWE-AKGQLRVKRKKVG-E-----ED--LLNVFFIVVA   98 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH-HTTSCEEECSCCC-G-----GG--SSSCSEEEEC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH-HcCCcEEEECCCC-H-----hH--hCCCCEEEEC
Confidence            36889999996 99999999999999999999885432 333333 2232122211110 0     00  1269999999


Q ss_pred             cchhHHHHHHHccccCcEEEEEeeec
Q 027106          116 VGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       116 ~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ++.+.....+...+..|..|.+...+
T Consensus        99 T~d~~~N~~I~~~ak~gi~VNvvD~p  124 (223)
T 3dfz_A           99 TNDQAVNKFVKQHIKNDQLVNMASSF  124 (223)
T ss_dssp             CCCTHHHHHHHHHSCTTCEEEC----
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEeCCc
Confidence            98865555555545588888865543

>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46

Probab=97.06  E-value=0.0039  Score=44.50  Aligned_cols=103  Identities=11%  Similarity=0.009  Sum_probs=61.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHH--CCCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRY--FPDG  108 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~--~~~~  108 (228)
                      ....++++||-.|  .|.|..+..+++....+|++++.+++..+.+++.   .+...-+..... ++.+.....  ..+.
T Consensus        40 ~~~~~~~~vLD~G--cG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~  116 (187)
T 2fhp_A           40 GPYFDGGMALDLY--SGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM-DANRALEQFYEEKLQ  116 (187)
T ss_dssp             CSCCSSCEEEETT--CTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             HhhcCCCCEEEeC--CccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEEC-cHHHHHHHHHhcCCC
Confidence            3456889999888  4566666666664335999999999888877633   333111111111 333322221  1347


Q ss_pred             ccEEEcCcc------hhHHHHH--HHccccCcEEEEEee
Q 027106          109 IDIYFDNVG------AEMQEAA--IANMNTYGRVAVCGV  139 (228)
Q Consensus       109 ~d~vld~~g------~~~~~~~--~~~l~~~G~~v~~g~  139 (228)
                      ||+|+-...      ...+..+  .+.|+++|.++....
T Consensus       117 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~  155 (187)
T 2fhp_A          117 FDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD  155 (187)
T ss_dssp             EEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             CCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence            999886432      1244444  567899999887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	228
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	3e-31
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	2e-28
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-20
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	8e-18
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-17
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	4e-17
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-16
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-16
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	4e-16
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	5e-16
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	5e-15
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	6e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	2e-13
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	8e-13
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	4e-12
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	6e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	1e-09
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	3e-09
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	6e-09
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-08
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	5e-08
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	6e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-07
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	4e-07
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	4e-06
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	1e-04
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	2e-04
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	4e-04
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	0.001

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  111 bits (277), Expect = 3e-31
 Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 3/182 (1%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           PLS  +G +G  GLTAY GL E+   K GE V VSAA+G+VG +VGQ AKL GC VVG+A
Sbjct: 2   PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 61

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           GS EK+  LK   GFD AFNYK    L+ ALK+  PDG D YFDNVG E     ++ M  
Sbjct: 62  GSDEKIAYLKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKD 120

Query: 131 YGRVAVCGVISEYTDGKKRAA-PEMLDVIYKRIKFQGFLAADHLN-LYQDFISTTCNHLR 188
           +G++A+CG IS Y    +    P    +IYK+++ +GF+       + +  +      + 
Sbjct: 121 FGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVL 180

Query: 189 SG 190
            G
Sbjct: 181 EG 182

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (258), Expect = 2e-28
 Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 6/185 (3%)

Query: 12  LSYQVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQYAKLFGCYVVGS 69
           LSY +G +G  GLT+  G+ E G    G  + + VS A+G+ G L GQ   L GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 70  AGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMN 129
               ++  L        DA    +  ++   L+   P G+D+YFDNVG ++    I+ MN
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 130 TYGRVAVCGVISEYTDGKKRAAPE----MLDVIYKRIKFQGFLAADHLNLYQDFISTTCN 185
               + +CG IS+Y        P           + I  + F   ++ + ++  I     
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 186 HLRSG 190
             + G
Sbjct: 182 WFKEG 186

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 14/178 (7%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFV-SAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT 77
           +  + LTAY  L    K   G+  F+ +  + +VG    Q  KL     +     +  + 
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 78  LL---KDKLGFDDAFNYKEET-----DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMN 129
            +     +LG        +              +       +  + VG +        +N
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 130 TYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHL 187
             G +   G +S                I+K     GF   + L   ++  ++T N +
Sbjct: 129 NNGLMLTYGGMSFQP-----VTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQI 181

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 75.8 bits (185), Expect = 8e-18
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 11/151 (7%)

Query: 20  GFSGLTAYAG---LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV 76
           G +G TA      L + G   +   V V+ A+G VG +        G  VV S G++E  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 77  TLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAV 136
             L  +LG  +  + ++  D    LK           D VG +   + ++ +   G VAV
Sbjct: 62  DYL-KQLGASEVISREDVYD--GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 137 CGVISEYTDGKKRAAPEMLDVIYKRIKFQGF 167
            G+              +   I + +   G 
Sbjct: 119 SGLTGGGEV-----PATVYPFILRGVSLLGI 144

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 74.2 bits (181), Expect = 3e-17
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 5/155 (3%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +V +LG    T Y       K + G    V    G    ++          ++G   +K+
Sbjct: 5   KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD 64

Query: 75  KVTLLKDKLGFDDAFNYKEET-DLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGR 133
           K    K + G  +  N ++ +  ++  L      G+D  F+ +G      A       G 
Sbjct: 65  KFARAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW 123

Query: 134 VAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
                V    +  +    P  L        ++G  
Sbjct: 124 GVSVVVGVAASGEEIATRPFQL---VTGRTWKGTA 155

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.3 bits (181), Expect = 4e-17
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 2/177 (1%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
            G + LTA+  L E+G+   GE+V + +A+G VG      AK      + +    +    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
           +  +LG +   + +        L+     G+D+  +++  E  +  +  +   GR    G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 139 VISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIYPL 195
               Y D     A       +  +     L       Y+  +     H+  G +  L
Sbjct: 125 KKDVYADASLGLAALAKSASFSVVDLDLNLKLQP-ARYRQLLQHILQHVADGKLEVL 180

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 71.5 bits (174), Expect = 3e-16
 Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 8/159 (5%)

Query: 11  PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           P+   +G LG    T         K           A G+VG      AK+ G  ++ + 
Sbjct: 2   PIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAV 59

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMN 129
              E    L  +LG     N K + D  AA+K     G++   ++ G+ E+ +  +  + 
Sbjct: 60  DIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALG 118

Query: 130 TYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
             G++AV G     T  +     ++ D++       G +
Sbjct: 119 ILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVV 153

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 71.6 bits (174), Expect = 3e-16
 Identities = 19/176 (10%), Positives = 49/176 (27%), Gaps = 5/176 (2%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +V ++G    T Y    ++ K  +G    V    G    ++          ++G   +K+
Sbjct: 5   KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD 64

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
           K    K+    +       +  ++  L      G+D  F+ +G         +       
Sbjct: 65  KFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYG 124

Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSG 190
                         +       ++     ++G +        +D +        + 
Sbjct: 125 VSVI---VGVPPDSQNLSMNPMLLLSGRTWKGAIFGG--FKSKDSVPKLVADFMAK 175

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 71.4 bits (174), Expect = 4e-16
 Identities = 31/156 (19%), Positives = 48/156 (30%), Gaps = 11/156 (7%)

Query: 18  ILGFSGLTAYAG---LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
            +G +G TA      L E G   +   V V+ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
           +   L+             E  +   ++           D VG       ++ M   G V
Sbjct: 68  EHDYLRV---LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAA 170
           AV G+              +   I + +   G  + 
Sbjct: 125 AVSGLTGGAEVPT-----TVHPFILRGVSLLGIDSV 155

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 70.8 bits (172), Expect = 5e-16
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 2/155 (1%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
               GLT Y  L +  + K  E+    AA+G VG +  Q+AK  G  ++G+ G+ +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
              K G     NY+EE  ++   +      + + +D+VG +  E ++  +   G +   G
Sbjct: 69  AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 139 VISEYTDGKKRAAPEML-DVIYKRIKFQGFLAADH 172
             S    G           +   R   QG++    
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTRE 162

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 68.4 bits (166), Expect = 5e-15
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 13/156 (8%)

Query: 15  QVGILGFSGLTAYAGLF---EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG 71
           +  I+G +G TA   +    + G   +  ++ V+ ASG VG          G  VV  +G
Sbjct: 5   KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG 64

Query: 72  SKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTY 131
            +     LK  LG        E  + +   K+          D VG ++    +A MN  
Sbjct: 65  RESTHEYLKS-LGASRVLPRDEFAESRPLEKQ----VWAGAIDTVGDKVLAKVLAQMNYG 119

Query: 132 GRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF 167
           G VA CG+   +T         ++  I + ++ QG 
Sbjct: 120 GCVAACGLAGGFTLPT-----TVMPFILRNVRLQGV 150

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 68.0 bits (165), Expect = 6e-15
 Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 8/162 (4%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
            + +   SG TAY    E  +   G+ V +  A G +G      A+  G   V       
Sbjct: 5   VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP 63

Query: 75  KVTLLKDKLGFDDAFNYKE---ETDLKAALKRYFPDGIDIYFDNVGAEMQ-EAAIANMNT 130
               L +++G D   N +E   E   KA +      G D   +  G           +  
Sbjct: 64  NRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRR 123

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH 172
            G  +V GV         +    +   + K   F+G   +D 
Sbjct: 124 GGFYSVAGVAVPQDPVPFKVYEWL---VLKNATFKGIWVSDT 162

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.8 bits (154), Expect = 2e-13
 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 9/158 (5%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  +G+TAY  + +  +             G +GH+  Q  K+     V +   KE+   
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG-AEMQEAAIANMNTYGRVAVC 137
           L ++LG D   + + +  +K  ++     G+++  D VG     +     +   GR+ + 
Sbjct: 72  LAERLGADHVVDARRD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNL 175
           G   E            + VI   + F+G L  +++ L
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGNYVEL 161

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 62.3 bits (150), Expect = 8e-13
 Identities = 21/155 (13%), Positives = 38/155 (24%), Gaps = 6/155 (3%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
            V +LG    T +       K + G    V          V          ++    + +
Sbjct: 5   TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD 64

Query: 75  KVTLLKDKLGFDDAFNYKEETDL-KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGR 133
           K    K   G  D  N  + ++     L +    G+D   + VG              G 
Sbjct: 65  KFEKAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGW 123

Query: 134 VAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
                V                  +     ++G +
Sbjct: 124 GVSVLVGWTDLHDV----ATRPIQLIAGRTWKGSM 154

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 4e-12
 Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 9/158 (5%)

Query: 12  LSYQVG-ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           L ++ G  +G    TAY  L      K GE V V  ASG VG    Q A+ +G  ++G+A
Sbjct: 1   LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA 60

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
           G++E    +  + G  + FN++E   +    K     GIDI  + +        ++ ++ 
Sbjct: 61  GTEEGQK-IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSH 119

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
            GRV V G                 D + K     G  
Sbjct: 120 GGRVIVVGSRGTIE-------INPRDTMAKESSIIGVT 150

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 57.2 bits (137), Expect = 6e-11
 Identities = 24/125 (19%), Positives = 37/125 (29%), Gaps = 4/125 (3%)

Query: 18  ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVT 77
           ++G    T Y       K   G    V    G VG       K  G   +   G+ +   
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 78  LLKDKLGFDDAFNYKEETDLKA-ALKRYFPDGIDIYFDNVGA--EMQEAAIANMNTYGRV 134
               +LG  +  N K+        +      G+D   +  G    M  A  +     G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 135 AVCGV 139
            V G+
Sbjct: 126 VVLGL 130

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 51.1 bits (122), Expect = 1e-09
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 15 QVGILGFSGLTAYAGLFEIG---KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG 71
          +  I+G +G TA   +  +       +  ++ V+ ASG VG          G  VV  +G
Sbjct: 5  KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG 64

Query: 72 SKEKVTLLKDKLG 84
           +     LK  LG
Sbjct: 65 RESTHEYLK-SLG 76

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 53.0 bits (126), Expect = 1e-09
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 14/151 (9%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  +G+T Y+ L    +   G+KV V      +GH+  + A   G +VV    S+ K   
Sbjct: 12  LLCAGITTYSPLRH-WQAGPGKKVGVVGIG-GLGHMGIKLAHAMGAHVVAFTTSEAKRE- 68

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV-GAEMQEAAIANMNTYGRVAVC 137
               LG D+  N +   ++ A LK       D   + V      +     +   G + + 
Sbjct: 69  AAKALGADEVVNSRNADEMAAHLK-----SFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 123

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
           G            +PE+ ++I KR    G +
Sbjct: 124 GAP-----ATPHKSPEVFNLIMKRRAIAGSM 149

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 52.6 bits (125), Expect = 3e-09
 Identities = 29/157 (18%), Positives = 46/157 (29%), Gaps = 7/157 (4%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
              ++     T + G  E+   + G  V V      VG +    AKL G   +   GS+ 
Sbjct: 5   NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRP 62

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQ-EAAIANMNTYGR 133
                    G  D  NYK        +K     G+D      G       A+  +   G 
Sbjct: 63  ICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGI 122

Query: 134 VAVCGVISEYTDGKKRAAPEM-LDVIYKRIKFQGFLA 169
           ++       +  G     P +           +G L 
Sbjct: 123 ISNINY---HGSGDALLIPRVEWGCGMAHKTIKGGLC 156

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (122), Expect = 6e-09
 Identities = 9/50 (18%), Positives = 13/50 (26%), Gaps = 2/50 (4%)

Query: 1   MLRKFDPMGFPL--SYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAAS 48
            L K DP         +    G   +         G     + V +S  S
Sbjct: 115 GLEKVDPQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 26/138 (18%), Positives = 39/138 (28%), Gaps = 18/138 (13%)

Query: 25  TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG 84
           T Y G         G  V+V+ A G VG      A+L G  VV                G
Sbjct: 13  TGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG 70

Query: 85  FDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM----------------QEAAIANM 128
           F+ A    +    +          +D   D VG E                   + +   
Sbjct: 71  FEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVT 130

Query: 129 NTYGRVAVCGVISEYTDG 146
              G++ + G+      G
Sbjct: 131 RVAGKIGIPGLYVTEDPG 148

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (118), Expect = 2e-08
 Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 10/150 (6%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L   GLT Y+ L   G    G+KV +    G +G +    +K  G      + S  K   
Sbjct: 9   LLCGGLTVYSPLVRNG-CGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED 66

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCG 138
                G D      EE D        F   +     ++           M   GR+    
Sbjct: 67  AMKM-GADHYIATLEEGDWGEKYFDTFDLIVVCA-SSLTDIDFNIMPKAMKVGGRIVSIS 124

Query: 139 VISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
           +  ++          +     K +      
Sbjct: 125 IPEQHEM------LSLKPYGLKAVSISYSA 148

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 48.8 bits (115), Expect = 5e-08
 Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 7/151 (4%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +V ++G    + Y       K   G    V    G VG       K+ G   + +     
Sbjct: 5   RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDING 63

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRY-FPDGIDIYFDNVGA-EMQEAAIANMNTYG 132
           +       LG  D  N +E       +       G+D   D  G  +  +AA+       
Sbjct: 64  EKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGW 123

Query: 133 RVAVCGVISEYTDGKKRAAPEMLDVIYKRIK 163
                          +   P +  ++ + I 
Sbjct: 124 GSCTVVGAK----VDEMTIPTVDVILGRSIN 150

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 6e-08
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 4/128 (3%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           +V ++G    T Y    + GK K G    V    G VG  V    K  G   +      +
Sbjct: 6   KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK 64

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKA---ALKRYFPDGIDIYFDNVGAEMQEAAIANMNTY 131
                   +G  +  + K+ T   +   +       G           M +A  +    Y
Sbjct: 65  DKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNY 124

Query: 132 GRVAVCGV 139
           G   V GV
Sbjct: 125 GTSVVVGV 132

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 14/163 (8%)

Query: 12  LSY-QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           LS  +      S LTAY  L    + + GEKV V AA+G++G    Q A+  G  V+ +A
Sbjct: 1   LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
              EK+ L       + A   +         +R    G       V  +  E ++  +  
Sbjct: 60  SRPEKLALPLALGAEEAATYAEVP-------ERAKAWGGLDLVLEVRGKEVEESLGLLAH 112

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHL 173
            GR+   G       G+    P +  ++ + +   GF     L
Sbjct: 113 GGRLVYIGAAE----GEVAPIPPL-RLMRRNLAVLGFWLTPLL 150

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 46.3 bits (108), Expect = 4e-07
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 8/155 (5%)

Query: 19  LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTL 78
           L  SG+T Y  + +       + + V  A G +G +  Q AK      +     +E+   
Sbjct: 9   LTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE 67

Query: 79  LKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYF-DNVGAEMQEAAIANMNTYGRVAVC 137
              + G D   N   +  L    +     G+D     N   +        +   G+  + 
Sbjct: 68  AAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMV 127

Query: 138 GVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH 172
           G+                 +    I+F G L  + 
Sbjct: 128 GLFGADLH------YHAPLITLSEIQFVGSLVGNQ 156

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.5 bits (101), Expect = 4e-06
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 10/154 (6%)

Query: 15  QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE 74
           ++  +  +G+T Y GL +    + G+ V +S     +GH+  QYA+  G +V       +
Sbjct: 5   EIAPILCAGVTVYKGLKQ-TNARPGQWVAISGIG-GLGHVAVQYARAMGLHVAAI--DID 60

Query: 75  KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRV 134
              L   +           + D   A++R       +    V       AI      G +
Sbjct: 61  DAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTI 120

Query: 135 AVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL 168
           A+ G+              + DV+ K +   G +
Sbjct: 121 ALVGLPPGDFP------TPIFDVVLKGLHIAGSI 148

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 39.0 bits (89), Expect = 1e-04
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 20  GFSGLTAYAGLF-EIGKPKKGEKVFVS-AASGSVGHLVGQY 58
             +GLT    +       K   +++    A+   G  +  Y
Sbjct: 135 KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 38.2 bits (87), Expect = 2e-04
 Identities = 37/162 (22%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 12  LSY-QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA 70
           LS+ +   +  +G+T Y  L   G  K GE V +    G +GH+  QYAK  G  VV   
Sbjct: 1   LSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY-GIGGLGHVAVQYAKAMGLNVVAVD 58

Query: 71  GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNT 130
              EK  L   K    D      + D    +K             V     ++A  ++  
Sbjct: 59  IGDEK--LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRR 116

Query: 131 YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH 172
            G   + G+  E           + D +   IK  G +    
Sbjct: 117 GGACVLVGLPPEEMP------IPIFDTVLNGIKIIGSIVGTR 152

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 7/45 (15%), Positives = 14/45 (31%), Gaps = 3/45 (6%)

Query: 2   LRKFDPMGFPLSYQVGILGFSGLT-AYAGLFEIGKPKKGEKVFVS 45
           L    P      ++    GF  +  A+  +        G+ V  +
Sbjct: 105 LLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 4/34 (11%), Positives = 9/34 (26%), Gaps = 1/34 (2%)

Query: 18  ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSV 51
           +     +       E   P   + +  +   G V
Sbjct: 126 VDQLLTIVDREVSLEE-TPGALKDILQNRIQGRV 158

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	228
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	100.0
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	100.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	100.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	100.0
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.98
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.98
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.97
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.97
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.96
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.96
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.95
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.94
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.94
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.72
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.82
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.66
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.64
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.64
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.61
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.58
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.58
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.58
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.58
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.55
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.55
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.54
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.54
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.53
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.52
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.5
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.49
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.48
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.47
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.44
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.43
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.43
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.43
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.43
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.42
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.4
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.39
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.39
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.38
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.37
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.37
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.37
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.36
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.35
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.34
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.34
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.33
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.3
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	98.29
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.29
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	98.27
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.27
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.27
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	98.25
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.23
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.23
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.22
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.22
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.21
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.21
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	98.2
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	98.2
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	98.2
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.19
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.18
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.16
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.13
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	98.13
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	98.12
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	98.1
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.08
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.08
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.07
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.07
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	98.05
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.05
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	98.02
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.98
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.98
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.97
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.94
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.93
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.93
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.93
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.9
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.9
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.89
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.89
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.85
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.83
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.8
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.78
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.76
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.76
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.7
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.69
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.67
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.64
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.62
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.61
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.58
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	97.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.57
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.56
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	97.5
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.49
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.46
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	97.46
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	97.44
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.4
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.36
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.36
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	97.33
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	97.33
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	97.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.3
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	97.3
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.29
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	97.24
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.21
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.21
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	97.19
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	97.19
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.18
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	97.17
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	97.15
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.15
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.11
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.03
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.01
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	97.0
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	96.99
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	96.98
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.97
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.94
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	96.93
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.86
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.85
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.84
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.82
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.79
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.76
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.71
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.7
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.69
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.67
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.67
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	96.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.64
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.62
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	96.59
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.57
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	96.56
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	96.56
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.54
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.54
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.5
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.49
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.47
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	96.45
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.43
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	96.42
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.41
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.38
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	96.35
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.32
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.32
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	96.28
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.26
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	96.24
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	96.24
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.23
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	96.18
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.15
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.15
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.13
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.12
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	96.12
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	96.09
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.08
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.08
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	96.08
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	96.06
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.06
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.04
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.01
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.01
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.99
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.99
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.97
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	95.96
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.91
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	95.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	95.89
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.87
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	95.87
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.86
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.83
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.83
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.79
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.76
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	95.73
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.71
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.69
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.68
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.65
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.65
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.58
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.53
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.49
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.46
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.44
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.44
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.43
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.39
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	95.39
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	95.39
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	95.39
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.36
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.36
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.33
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	95.33
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	95.28
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.27
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.25
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.25
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.14
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.14
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	95.12
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	95.12
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.09
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.07
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.02
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	95.02
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.99
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.85
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.78
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.72
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	94.71
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.66
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	94.6
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.58
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.56
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.46
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.45
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.44
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.41
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.37
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.35
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.32
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.29
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	94.28
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.13
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.13
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.12
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	93.92
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.86
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	93.85
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.79
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.77
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	93.59
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	93.56
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.47
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.42
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.34
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.25
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.25
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.21
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	93.17
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.14
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.06
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.0
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.94
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.93
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.84
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.76
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.75
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.72
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	92.63
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	92.59
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	92.56
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	92.39
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	92.35
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	92.31
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.26
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	92.24
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	92.02
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.01
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.78
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.76
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	91.72
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.65
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	91.61
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	91.39
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.37
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.34
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.33
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.09
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.07
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	91.01
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.92
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.84
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.82
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	90.74
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.67
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.53
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.47
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.47
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	90.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	90.38
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.31
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.27
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	90.2
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.08
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.02
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.0
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.8
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.66
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	89.57
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.35
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.34
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	89.25
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.18
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.11
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.9
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.78
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	88.63
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.5
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.39
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.36
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.31
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	88.22
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.15
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	88.12
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	88.06
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	88.05
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.02
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.87
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	87.85
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.79
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.79
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	87.74
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.7
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.61
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	87.58
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.38
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.33
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	87.19
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.94
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	86.7
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.62
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	86.48
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	86.3
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	86.22
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	86.08
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	85.76
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.62
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	85.3
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	85.13
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	84.92
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	84.9
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	84.88
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	84.82
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.66
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	84.57
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	84.52
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	84.24
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	84.15
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	84.05
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.71
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	83.67
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.6
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.55
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	83.51
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.45
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.33
d1qama_	235	rRNA adenine dimethylase {Bacillus subtilis, Ermc'	83.27
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	82.94
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	82.73
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	82.41
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.19
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.01
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.41
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	81.11
d1fp1d2	244	Chalcone O-methyltransferase {Alfalfa (Medicago sa	81.01
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	80.95
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.86
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	80.6
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	80.44
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	80.43
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.07
d1ej0a_	180	RNA methyltransferase FtsJ {Escherichia coli [TaxI	80.03

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.2e-34  Score=208.47  Aligned_cols=175  Identities=23%  Similarity=0.363  Sum_probs=153.6

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccCh
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEE   94 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~   94 (228)
                      |||+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++.
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            699999999999999999999999999999999999999999999999999999999999999999 9999999999887


Q ss_pred             hhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccc-
Q 027106           95 TDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH-  172 (228)
Q Consensus        95 ~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  172 (228)
                       ++.+.+++.+++ |+|++|||+|++.++.++++++++|+++.+|......     ........+.++.++.++..... 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-----DASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT-----TCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCC-----CcccchHHHhCCcEEEEEEcccee
Confidence             999999999987 9999999999999999999999999999998765422     12223344468888888876543 


Q ss_pred             ---hhHHHHHHHHHHHHHHcCCCcccc
Q 027106          173 ---LNLYQDFISTTCNHLRSGAIYPLE  196 (228)
Q Consensus       173 ---~~~~~~~~~~~~~~~~~g~i~~~~  196 (228)
                         +...++.++++.+++++|+++|.+
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence               455678899999999999999864

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-33  Score=202.17  Aligned_cols=170  Identities=25%  Similarity=0.365  Sum_probs=145.3

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      +|++ ++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++
T Consensus         1 ls~~-~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi   78 (174)
T d1yb5a2           1 LDFK-QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVF   78 (174)
T ss_dssp             SCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEE
T ss_pred             CCHH-HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCccccc
Confidence            3566 899999999999999988899999999999999999999999999999999999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeecee
Q 027106           90 NYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL  168 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (228)
                      |+++. ++.+.+++.+++ ++|+++|++|++.++.++++++++|+++.+|..+.       .+.++..++.+++++.|+.
T Consensus        79 ~~~~~-~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~  150 (174)
T d1yb5a2          79 NHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVT  150 (174)
T ss_dssp             ETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECC
T ss_pred             ccccc-cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEE
Confidence            99987 999999998887 99999999999999999999999999999986432       3566788899999999998


Q ss_pred             cccc-hhHHHHHHHHHHHHHHc
Q 027106          169 AADH-LNLYQDFISTTCNHLRS  189 (228)
Q Consensus       169 ~~~~-~~~~~~~~~~~~~~~~~  189 (228)
                      +... ++..++..+.+.+.++.
T Consensus       151 ~~~~~~~~~~~~~~~l~~g~~~  172 (174)
T d1yb5a2         151 LFSSTKEEFQQYAAALQAGMEI  172 (174)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCHHHHHHHHHHHHHHHHc
Confidence            6653 32233334444333333

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=100.00  E-value=4.7e-33  Score=202.45  Aligned_cols=173  Identities=41%  Similarity=0.722  Sum_probs=151.3

Q ss_pred             hhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChh
Q 027106           16 VGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEET   95 (228)
Q Consensus        16 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   95 (228)
                      .+++.++++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. 
T Consensus         7 l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~-   84 (182)
T d1v3va2           7 LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTV-   84 (182)
T ss_dssp             GTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-
T ss_pred             HHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcccccc-
Confidence            57889999999999999999999999999999999999999999999999999999999999999 9999999998887 


Q ss_pred             hHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC-cCCCccchHHHHhhhceeeceecccc-
Q 027106           96 DLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG-KKRAAPEMLDVIYKRIKFQGFLAADH-  172 (228)
Q Consensus        96 ~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  172 (228)
                      ++.+.+.+.+.+ |+|+|||++|++.++.++++++++|+++.+|..++.+.. ......++..++.+++++.|++..++ 
T Consensus        85 ~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~  164 (182)
T d1v3va2          85 NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  164 (182)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccC
Confidence            777776666555 999999999999999999999999999999976654321 22334667889999999999988776 


Q ss_pred             hhHHHHHHHHHHHHHHcC
Q 027106          173 LNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       173 ~~~~~~~~~~~~~~~~~g  190 (228)
                      ++..++.++++.+|+++|
T Consensus       165 ~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         165 GDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhCc
Confidence            555678899999999886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-32  Score=196.18  Aligned_cols=173  Identities=23%  Similarity=0.268  Sum_probs=145.5

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      +|++ +||+++++++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++|+++++++++.++++ ++|+++++
T Consensus         1 isfe-~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi   78 (179)
T d1qora2           1 ISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVI   78 (179)
T ss_dssp             SCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEE
T ss_pred             CCHH-HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEE
Confidence            4677 899999999999999988899999999999999999999999999999999999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCC-CccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhh-hceeece
Q 027106           90 NYKEETDLKAALKRYFPD-GIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYK-RIKFQGF  167 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  167 (228)
                      |++++ ++.+++++.+++ ++|+++|+.+++.+..++++++++|+++.++.....     ....+...+..+ .+.+...
T Consensus        79 ~~~~~-d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~  152 (179)
T d1qora2          79 NYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRP  152 (179)
T ss_dssp             ETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECC
T ss_pred             ECCCC-CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCC-----ccccchhhhhccceEEEEee
Confidence            99987 999999999988 999999999999999999999999999998876543     223334444333 3444433


Q ss_pred             ecccc---hhHHHHHHHHHHHHHHcC
Q 027106          168 LAADH---LNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       168 ~~~~~---~~~~~~~~~~~~~~~~~g  190 (228)
                      .+..+   ++...+.++++.+|+++|
T Consensus       153 ~l~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         153 SLQGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             CHHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             EEeeecCCHHHHHHHHHHHHHHHHCc
Confidence            33322   444567788889998887

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.98  E-value=4.6e-31  Score=190.38  Aligned_cols=171  Identities=21%  Similarity=0.300  Sum_probs=150.1

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      |++ .+++++|.+.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++.+++++++++ ++|+++++
T Consensus         2 P~e-~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i   78 (174)
T d1f8fa2           2 PIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVI   78 (174)
T ss_dssp             CGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEE
T ss_pred             CHH-HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEE
Confidence            455 689999999999999988899999999999996 9999999999999999 6677888999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeecee
Q 027106           90 NYKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFL  168 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (228)
                      |+++. ++.+++++.+++++|+||||+|. +.++.++++++++|+++.+|....    .....++...++.+++++.|++
T Consensus        79 ~~~~~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~  153 (174)
T d1f8fa2          79 NSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVV  153 (174)
T ss_dssp             ETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECS
T ss_pred             eCCCc-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEE
Confidence            99886 89999999998899999999997 588999999999999999997543    2234677889999999999988


Q ss_pred             cccchhHHHHHHHHHHHHHHcCC
Q 027106          169 AADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ..++.  .++.++++++|+++|+
T Consensus       154 ~g~~~--~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         154 EGSGS--PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GGGSC--HHHHHHHHHHHHHTTS
T ss_pred             ecCCC--hHHHHHHHHHHHHcCC
Confidence            66542  2567899999999986

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=5.4e-32  Score=194.26  Aligned_cols=173  Identities=21%  Similarity=0.279  Sum_probs=137.1

Q ss_pred             CCcchhhhccchhHHHHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 027106           10 FPLSYQVGILGFSGLTAYAGLF---EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD   86 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~   86 (228)
                      +|++ +||+++++++|||++++   +.++.++|++|||+||+|++|.+++|+|+.+|++|+++++++++.++++ ++|++
T Consensus         1 lS~~-eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~   78 (176)
T d1xa0a2           1 LTLK-EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAK   78 (176)
T ss_dssp             CCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCS
T ss_pred             CCHH-HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccc
Confidence            4677 89999999999997654   4588999999999999999999999999999999999999999999999 99999


Q ss_pred             ceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeec
Q 027106           87 DAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG  166 (228)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (228)
                      +++|+++  .+.+.++...++++|+|||+.|++.+..++++|+++|+++.+|...+.     ..+.+...++.|++++.|
T Consensus        79 ~vi~~~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~G  151 (176)
T d1xa0a2          79 EVLARED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLG  151 (176)
T ss_dssp             EEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEE
T ss_pred             eeeecch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEE
Confidence            9998864  444444444445999999999999999999999999999999987643     346788999999999999


Q ss_pred             eecccchhHHHHHHHHHHHHHHcCCCccc
Q 027106          167 FLAADHLNLYQDFISTTCNHLRSGAIYPL  195 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~  195 (228)
                      ......+   .+...++++.+ .|+++|.
T Consensus       152 v~~~~~~---~~~~~~~~~~l-ag~lkP~  176 (176)
T d1xa0a2         152 IDSVYCP---MDLRLRIWERL-AGDLKPD  176 (176)
T ss_dssp             CCSSSCC---HHHHHHHHHHH-HTTTCCC
T ss_pred             EeCCcCC---HHHHHHHHHHH-hcccCCC
Confidence            7543321   23333444444 3777763

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.1e-30  Score=190.38  Aligned_cols=176  Identities=32%  Similarity=0.589  Sum_probs=142.5

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeec
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKG--EKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNY   91 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~   91 (228)
                      ...+++++++|||++|++.+++++|  ++|||+||+|++|++++|+||.+|+ .|++++.++++...+.+++|+++++|+
T Consensus         5 ~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~   84 (187)
T d1vj1a2           5 FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNY   84 (187)
T ss_dssp             GGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEET
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeec
Confidence            3667889999999999999999988  8899999999999999999999999 566677777766656548999999999


Q ss_pred             cChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCC----cCCCccchHHHHhhhceeece
Q 027106           92 KEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDG----KKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      .++ ++.+.+++.++.|+|+|||++|++.+..++++++++|+++.+|..++.+..    .............+++++.++
T Consensus        85 ~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~  163 (187)
T d1vj1a2          85 KTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERF  163 (187)
T ss_dssp             TSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEEC
T ss_pred             cch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEe
Confidence            987 999999999877999999999999999999999999999999975543211    111112234466789999998


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCC
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ...++.+.+.+.++++.+++++|+
T Consensus       164 ~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         164 TVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             CGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EecchHHHHHHHHHHHHHHHHCcC
Confidence            887776667789999999999986

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=1.8e-30  Score=186.78  Aligned_cols=166  Identities=20%  Similarity=0.253  Sum_probs=149.1

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      ++. +||+++|+++|||+++ +..++++|++|+|+|++|++|++++|+++..|+ +|++++.++++.++++ ++|+++++
T Consensus         2 ~~~-eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i   78 (170)
T d1jvba2           2 NAV-EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVI   78 (170)
T ss_dssp             CHH-HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEE
T ss_pred             CHH-HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceee
Confidence            344 7999999999999999 668999999999999889999999999999996 9999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           90 NYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      ++++. ++.+.+++.+.+ ++|+++||+|+ ..++.++++++++|+++.+|....      ..+++...++.+++++.|+
T Consensus        79 ~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs  151 (170)
T d1jvba2          79 NASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGS  151 (170)
T ss_dssp             ETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEEC
T ss_pred             ccCCc-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEE
Confidence            98876 888888888877 89999999997 578999999999999999986542      3467788899999999999


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCC
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      +.++     ++.++++++++++||
T Consensus       152 ~~~~-----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         152 LVGN-----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTS
T ss_pred             ecCC-----HHHHHHHHHHHHcCC
Confidence            9887     578999999999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=3.4e-31  Score=190.43  Aligned_cols=149  Identities=27%  Similarity=0.351  Sum_probs=123.7

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      ++++ ++|+++++++|||+++. .+++++||+|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++
T Consensus         1 ls~e-eAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i   77 (171)
T d1iz0a2           1 LSPE-EAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAA   77 (171)
T ss_dssp             CCHH-HHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEE
T ss_pred             CCHH-HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceee
Confidence            3556 89999999999999995 589999999999999999999999999999999999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           90 NYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      |+.+.   ...+..  ++|+|+|||++| +.+..++++++++|+++.+|...+.     ..+.++..++.+++++.|++.
T Consensus        78 ~~~~~---~~~~~~--~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~  146 (171)
T d1iz0a2          78 TYAEV---PERAKA--WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWL  146 (171)
T ss_dssp             EGGGH---HHHHHH--TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCH
T ss_pred             ehhhh---hhhhhc--cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeC
Confidence            88642   223322  238999999987 5788999999999999999976532     345677888999999999988


Q ss_pred             ccc
Q 027106          170 ADH  172 (228)
Q Consensus       170 ~~~  172 (228)
                      .++
T Consensus       147 ~~~  149 (171)
T d1iz0a2         147 TPL  149 (171)
T ss_dssp             HHH
T ss_pred             cCh
Confidence            765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.97  E-value=2.4e-30  Score=189.04  Aligned_cols=175  Identities=18%  Similarity=0.269  Sum_probs=143.9

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhC
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVS-AASGSVGHLVGQYAKLFGCYVVGSAGSKE----KVTLLKDKLG   84 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-ga~g~~G~~a~~~a~~~g~~V~~~~~~~~----~~~~~~~~~g   84 (228)
                      +|++ ++|+++++++|||++|.+.+++++|++|+|+ ||+|++|++++|+||.+|++|++++++++    +.+.++ ++|
T Consensus         1 ls~~-~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lG   78 (189)
T d1gu7a2           1 LTIN-QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELG   78 (189)
T ss_dssp             CCHH-HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHT
T ss_pred             CCHH-HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hcc
Confidence            4667 8999999999999999888999999998886 77899999999999999999999875543    455667 899


Q ss_pred             CCceeeccCh--hhHHHHHHHHC---CCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHh
Q 027106           85 FDDAFNYKEE--TDLKAALKRYF---PDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIY  159 (228)
Q Consensus        85 ~~~~~~~~~~--~~~~~~~~~~~---~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  159 (228)
                      +++++++++.  .++.+.+++.+   ++++|++||++|++.+..++++|+++|+++.+|..++.     +..++...++.
T Consensus        79 ad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~  153 (189)
T d1gu7a2          79 ATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIF  153 (189)
T ss_dssp             CSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHH
T ss_pred             ccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHH
Confidence            9999987542  13344444433   34899999999999999999999999999999976532     34577888889


Q ss_pred             hhceeeceecccc----hhHHHHHHHHHHHHHHcCC
Q 027106          160 KRIKFQGFLAADH----LNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       160 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~  191 (228)
                      +++++.|++...+    ++..++.++++.+++++|+
T Consensus       154 k~~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         154 KNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             SCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             CCcEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            9999999987655    4556788999999999886

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.3e-29  Score=181.63  Aligned_cols=165  Identities=22%  Similarity=0.349  Sum_probs=143.2

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      +++. ++|+++|+++|||+++ +.+++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++
T Consensus         1 v~f~-~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i   76 (166)
T d1llua2           1 VEFA-EIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTV   76 (166)
T ss_dssp             SCHH-HHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEE
T ss_pred             CCHH-HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccc
Confidence            3566 8999999999999999 5689999999999995 99999999999999999999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           90 NYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      |+.+. +..+.+.+.+.+..++++++.+++.++.++++++++|+++.+|...+      ....+...++.+++++.|++.
T Consensus        77 ~~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~  149 (166)
T d1llua2          77 NARQE-DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIV  149 (166)
T ss_dssp             ETTTS-CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCS
T ss_pred             cccch-hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEee
Confidence            98876 78888877665555556655666899999999999999999996543      236778899999999999988


Q ss_pred             ccchhHHHHHHHHHHHHHHcC
Q 027106          170 ADHLNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~g  190 (228)
                      ++     ++.++++++++.+|
T Consensus       150 ~~-----~~d~~e~l~l~~~G  165 (166)
T d1llua2         150 GT-----RADLQEALDFAGEG  165 (166)
T ss_dssp             CC-----HHHHHHHHHHHHTT
T ss_pred             cC-----HHHHHHHHHHHHCc
Confidence            77     57789999999887

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.9e-29  Score=181.09  Aligned_cols=168  Identities=23%  Similarity=0.309  Sum_probs=149.3

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      +|++ +||+++|+++|||+++ ...++++|++|||+|+ |++|++++|+++..|++|++++.+++++++++ ++|++.++
T Consensus         1 ls~e-eAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~   76 (168)
T d1rjwa2           1 LSFE-EAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVV   76 (168)
T ss_dssp             SCHH-HHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEE
T ss_pred             CCHH-HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceec
Confidence            4677 8999999999999999 5689999999999985 99999999999999999999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           90 NYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      ++.+. ++.+.+++.+++..|+++++.+...+..++++++++|+++.+|...+      ....+...++.+++++.|+..
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~  149 (168)
T d1rjwa2          77 NPLKE-DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIV  149 (168)
T ss_dssp             CTTTS-CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCS
T ss_pred             ccccc-hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEee
Confidence            99887 88888988887766777766666899999999999999999997643      236778889999999999987


Q ss_pred             ccchhHHHHHHHHHHHHHHcCCCc
Q 027106          170 ADHLNLYQDFISTTCNHLRSGAIY  193 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~g~i~  193 (228)
                      +.     ++.++++++++++|+++
T Consensus       150 ~~-----~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         150 GT-----RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             CC-----HHHHHHHHHHHHTTSCC
T ss_pred             CC-----HHHHHHHHHHHHhCCCC
Confidence            77     67899999999999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=1.1e-29  Score=182.65  Aligned_cols=171  Identities=18%  Similarity=0.160  Sum_probs=138.6

Q ss_pred             CCcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCce
Q 027106           10 FPLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDA   88 (228)
Q Consensus        10 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~   88 (228)
                      +|++ +|+.++++++|||+++ +.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++.+++|++.++ ++|++++
T Consensus         1 ip~e-~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~   76 (174)
T d1jqba2           1 MPLE-NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDI   76 (174)
T ss_dssp             SCHH-HHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEE
T ss_pred             CCHH-HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCcccc
Confidence            3566 6777889999999998 6699999999999985 9999999999999998 8999999999999999 9999999


Q ss_pred             eeccChhhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeec
Q 027106           89 FNYKEETDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG  166 (228)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (228)
                      +|+++. ++.+.+++.+++ |+|++|||+|+ ..++.++++++++|+++.+|......  ....+........++.++.+
T Consensus        77 i~~~~~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~i~g  153 (174)
T d1jqba2          77 LNYKNG-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGD--ALLIPRVEWGCGMAHKTIKG  153 (174)
T ss_dssp             ECGGGS-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSS--EEEEETTTTGGGTBCCEEEE
T ss_pred             ccccch-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCC--cCcCcHhHHHHHhCccEEEE
Confidence            999886 889999999988 99999999997 58899999999999999999755321  00011111223346677777


Q ss_pred             eecccchhHHHHHHHHHHHHHHcCC
Q 027106          167 FLAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ......    +...+.+.++++.||
T Consensus       154 ~~~~~~----r~~~e~l~~li~~gk  174 (174)
T d1jqba2         154 GLCPGG----RLRAERLRDMVVYNR  174 (174)
T ss_dssp             BCCCCH----HHHHHHHHHHHHTTS
T ss_pred             ecCCCC----cccHHHHHHHHHcCC
Confidence            655432    455677888888875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=6.6e-29  Score=178.76  Aligned_cols=161  Identities=20%  Similarity=0.293  Sum_probs=140.4

Q ss_pred             hhhccchhHHHHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecc
Q 027106           15 QVGILGFSGLTAYAGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYK   92 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (228)
                      ++|+|+|+++|||+++.+.. .+++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++ ++|+++++++.
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            69999999999999997765 5899999999995 9999999999999997 7888899999999999 99999999988


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecc
Q 027106           93 EETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAA  170 (228)
Q Consensus        93 ~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (228)
                      +. + .+...+.+.+ ++|++|||+|+. .++.++++++++|+++.+|...       ..+++...++.+++++.|++.+
T Consensus        86 ~~-~-~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 RD-P-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             SC-H-HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             cc-H-HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            64 4 4445566666 999999999984 7999999999999999999532       2367788899999999999988


Q ss_pred             cchhHHHHHHHHHHHHHHcCC
Q 027106          171 DHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      +     ++.++++++|+.+||
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            8     577899999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=5.7e-29  Score=180.75  Aligned_cols=165  Identities=21%  Similarity=0.281  Sum_probs=138.8

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      .+|++.|+++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|+++++|+.+
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            588899999999999988899999999999996 9999999999999998 8999999999999999 999999998876


Q ss_pred             h--hhHHHHHHHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccch-HHHHhhhceeecee
Q 027106           94 E--TDLKAALKRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM-LDVIYKRIKFQGFL  168 (228)
Q Consensus        94 ~--~~~~~~~~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  168 (228)
                      .  .+..+.+.+.+++ |+|+||||+|+ ..++.++++++++|+++.+|...+.    ...+.+. ..++.+++++.|++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l~~k~l~i~G~~  158 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWLVLKNATFKGIW  158 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHTTTTTCEEEECC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHHHHCCcEEEEEE
Confidence            5  1234557777877 99999999998 5889999999999999999965432    1223333 34668999999999


Q ss_pred             cccchhHHHHHHHHHHHHHHcC
Q 027106          169 AADHLNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~g  190 (228)
                      .++     .+.+++++++++++
T Consensus       159 ~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         159 VSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCC-----HHHHHHHHHHHHTC
T ss_pred             eCC-----HHHHHHHHHHHHHC
Confidence            887     56778888887764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.5e-28  Score=176.26  Aligned_cols=163  Identities=25%  Similarity=0.308  Sum_probs=135.7

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN   90 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~   90 (228)
                      ++. .+|++.|++.|+|+++ +.+++++|++|+|+|+ |++|++++|+|+.+|+++++++++++++++++ ++|++.+++
T Consensus         5 ~~a-~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~   80 (168)
T d1uufa2           5 QLA-AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVN   80 (168)
T ss_dssp             GHH-HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEE
T ss_pred             cHH-HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEE
Confidence            455 6889999999999999 6799999999999995 99999999999999999999999999999999 999999999


Q ss_pred             ccChhhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           91 YKEETDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      +.+. +....    ..+++|++||++|. ..+..++++++++|+++.+|...+.     ....+...++.+++++.|++.
T Consensus        81 ~~~~-~~~~~----~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~l~~k~~~i~Gs~~  150 (168)
T d1uufa2          81 SRNA-DEMAA----HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGSMI  150 (168)
T ss_dssp             TTCH-HHHHT----TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCS
T ss_pred             Cchh-hHHHH----hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCC-----cccccHHHHHHCCcEEEEEee
Confidence            8875 32211    12389999999997 4799999999999999999975532     335677888899999999998


Q ss_pred             ccchhHHHHHHHHHHHHHHcCCC
Q 027106          170 ADHLNLYQDFISTTCNHLRSGAI  192 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~g~i  192 (228)
                      ++     ++.++++++++.+++|
T Consensus       151 ~~-----~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         151 GG-----IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             CC-----HHHHHHHHHHHHHHTC
T ss_pred             cC-----HHHHHHHHHHHHHcCC
Confidence            87     5778889999888764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=5e-28  Score=174.89  Aligned_cols=172  Identities=19%  Similarity=0.221  Sum_probs=139.1

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      |++ ++|.++|++.|+|+++.+.+++++||+|||+|+ |++|++++|+++.+|+ +|++++++++++++++ ++|+++++
T Consensus         2 P~e-~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i   78 (176)
T d2fzwa2           2 PLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECI   78 (176)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEE
T ss_pred             CHH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEE
Confidence            455 799999999999999988899999999999996 8999999999999997 7888999999999999 99999999


Q ss_pred             eccCh-hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           90 NYKEE-TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        90 ~~~~~-~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      |+.+. ++....++..+++++|++||++|. ..+..+..+++++|+++.++......    ....+....+.++.++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~----~~~~~~~~~~~~~~~i~Gs  154 (176)
T d2fzwa2          79 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----EEIATRPFQLVTGRTWKGT  154 (176)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHHHHTTCEEEEC
T ss_pred             eCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecccc----ccccccHHHHHCCCEEEEE
Confidence            88642 255666667666699999999997 57788899999998888876544321    2233334445678999998


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCC
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ...+...  ++.+.++++++++|+
T Consensus       155 ~~G~~~~--~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         155 AFGGWKS--VESVPKLVSEYMSKK  176 (176)
T ss_dssp             SGGGCCH--HHHHHHHHHHHHTTS
T ss_pred             eeeCCcH--HHHHHHHHHHHHcCC
Confidence            8766422  567889999999886

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.1e-29  Score=180.68  Aligned_cols=164  Identities=18%  Similarity=0.119  Sum_probs=137.9

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN   90 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~   90 (228)
                      |++ .||++.|++.|+|+++ +..++++|++|+|+|+ |++|++++|+|+.+|++|++++++++++++++ ++|++++++
T Consensus         2 p~e-~AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~   77 (168)
T d1piwa2           2 PSH-LAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIA   77 (168)
T ss_dssp             CHH-HHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEE
T ss_pred             CHH-HHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEee
Confidence            344 5889999999999999 5689999999999996 99999999999999999999999999999999 999999888


Q ss_pred             ccChhhHHHHHHHHCCCCccEEEcCcchh---HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           91 YKEETDLKAALKRYFPDGIDIYFDNVGAE---MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      +.+..++.+    ...+++|+++||.+..   .+..++++++++|+++.+|...+      ...++...++.+++++.|+
T Consensus        78 ~~~~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs  147 (168)
T d1piwa2          78 TLEEGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYS  147 (168)
T ss_dssp             GGGTSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEEC
T ss_pred             ccchHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEE
Confidence            765323322    2234799999998753   57789999999999999996543      2355667778899999999


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCCCc
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGAIY  193 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~i~  193 (228)
                      ..++     ++.++++++++++|+++
T Consensus       148 ~~g~-----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         148 ALGS-----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CCCC-----HHHHHHHHHHHHHTTCC
T ss_pred             eeCC-----HHHHHHHHHHHHhCCCC
Confidence            8877     57889999999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.96  E-value=4.1e-28  Score=174.24  Aligned_cols=166  Identities=20%  Similarity=0.227  Sum_probs=135.4

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      ++|.|.|.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+++..|+ +|++++.+++|+++++ ++|+++++++..
T Consensus         5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~   82 (174)
T d1e3ia2           5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE   82 (174)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence            689999999999999988899999999999985 9999999999999999 7889999999999999 999999988654


Q ss_pred             hhhHHHH-HHHHCCCCccEEEcCcch-hHHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecc
Q 027106           94 ETDLKAA-LKRYFPDGIDIYFDNVGA-EMQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAA  170 (228)
Q Consensus        94 ~~~~~~~-~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (228)
                      .++.... .+...++|+|++|||+|. ..++.++++++++ |+++.+|...+      ...++...++ .+.++.|++..
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~-~~k~i~Gs~~G  155 (174)
T d1e3ia2          83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVI-LGRSINGTFFG  155 (174)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHH-TTCEEEECSGG
T ss_pred             chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHh-ccCEEEEEEee
Confidence            3233333 444444599999999998 5899999999996 99999997543      2345555554 46688888766


Q ss_pred             cchhHHHHHHHHHHHHHHcCC
Q 027106          171 DHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ++.  .++.+.++++++++|+
T Consensus       156 s~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GCC--HHHHHHHHHHHHHTTS
T ss_pred             CCC--hHHHHHHHHHHHHCcC
Confidence            542  2577889999998885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-28  Score=174.11  Aligned_cols=163  Identities=20%  Similarity=0.226  Sum_probs=138.0

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      +.|++.+++++||+++ +++++++|++|+|+|+ |++|++++|+|+.+|+ +|++++.+++++++++ ++|+++++++.+
T Consensus         4 e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~   80 (171)
T d1pl8a2           4 EEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISK   80 (171)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSS
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccccc
Confidence            3677889999999999 6689999999999996 9999999999999999 8999999999999999 999999888776


Q ss_pred             hhhHHHHHH---HHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceec
Q 027106           94 ETDLKAALK---RYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLA  169 (228)
Q Consensus        94 ~~~~~~~~~---~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (228)
                      . +..+..+   ...+.++|++|||+|++ .++.++++++++|+++.+|.+..      ..++++..++.|++++.|++.
T Consensus        81 ~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs~~  153 (171)
T d1pl8a2          81 E-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFR  153 (171)
T ss_dssp             C-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCS
T ss_pred             c-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEEeC
Confidence            5 5443333   22334899999999984 88999999999999999997653      336778899999999999875


Q ss_pred             ccchhHHHHHHHHHHHHHHcCCCc
Q 027106          170 ADHLNLYQDFISTTCNHLRSGAIY  193 (228)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~g~i~  193 (228)
                      +.      +.++++++++++|++.
T Consensus       154 ~~------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         154 YC------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             CS------SCHHHHHHHHHTTSCC
T ss_pred             CH------hHHHHHHHHHHcCCCC
Confidence            43      4578899999999873

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=1.1e-27  Score=172.06  Aligned_cols=164  Identities=18%  Similarity=0.209  Sum_probs=136.2

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN   90 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~   90 (228)
                      |++  .|++..+++|||+++ +..++++|++|+|+| +|++|++++|+|+.+|++|++++++++++++++ ++|++..++
T Consensus         2 S~e--~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~   76 (170)
T d1e3ja2           2 SLE--EGALLEPLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLV   76 (170)
T ss_dssp             CHH--HHHTHHHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             CHH--HHHHHHHHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEe
Confidence            444  677888999999999 668999999999998 599999999999999999999999999999999 999977654


Q ss_pred             ccCh----hhHHHHHHHHCCCCccEEEcCcchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceee
Q 027106           91 YKEE----TDLKAALKRYFPDGIDIYFDNVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQ  165 (228)
Q Consensus        91 ~~~~----~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (228)
                      .+..    .+..+.+++..++++|++|||+|++ .++.++++++++|+++.+|...+      ...+++..++.+++++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~  150 (170)
T d1e3ja2          77 VDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIK  150 (170)
T ss_dssp             CCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEE
T ss_pred             ccccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEE
Confidence            4321    1344556665566999999999985 78999999999999999997643      23677888999999999


Q ss_pred             ceecccchhHHHHHHHHHHHHHHcCC
Q 027106          166 GFLAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      |++.+.      +.++++++++++|+
T Consensus       151 gs~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         151 SVFRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             ECCSCS------SCHHHHHHHHHTTS
T ss_pred             EEECCH------HHHHHHHHHHHcCC
Confidence            987544      35678889998885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.96  E-value=1.6e-27  Score=171.35  Aligned_cols=167  Identities=19%  Similarity=0.211  Sum_probs=134.8

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      ++|.|.|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+|+.+|+ +|++++++++|+++++ ++|+++++|+++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            489999999999999988899999999999995 9999999999999998 8999999999999999 999999998775


Q ss_pred             hhh-HHHHHHHHCCCCccEEEcCcch-hHHHHHHHcccc-CcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecc
Q 027106           94 ETD-LKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNT-YGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAA  170 (228)
Q Consensus        94 ~~~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (228)
                      .++ ..+..+..+++++|++||++|. +.+..++..+++ +|+++.+|.....    ...+.++.. +.++.++.|++..
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLL-LLTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHH-HHTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCHHH-HhCCCEEEEEEeC
Confidence            422 4455555566699999999998 577888888876 5999999975432    122333333 4468899998876


Q ss_pred             cchhHHHHHHHHHHHHHHcCC
Q 027106          171 DHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ++.   .+.++++++++++|+
T Consensus       157 ~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GCC---GGGHHHHHHHHHTTS
T ss_pred             CCC---HHHHHHHHHHHHcCC
Confidence            542   246788999998875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=3.4e-27  Score=170.41  Aligned_cols=172  Identities=18%  Similarity=0.239  Sum_probs=136.0

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      |++ +||.++|+++|+|+++.+.+++++||+|||+|+ |++|++++++++..|+ +|+++++++++.+.++ ++|+++++
T Consensus         2 Ple-~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i   78 (176)
T d2jhfa2           2 PLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECV   78 (176)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEE
T ss_pred             CHH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEE
Confidence            455 799999999999999988999999999999997 9999999999999996 9999999999999999 99999988


Q ss_pred             eccChhh-HHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           90 NYKEETD-LKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        90 ~~~~~~~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      ++.+.++ .....+...++|+|++||++|. ..+..++..++++|..+.++...+.    ..........+.+++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs  154 (176)
T d2jhfa2          79 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGA  154 (176)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEEC
T ss_pred             ecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEE
Confidence            7754323 4445555555699999999997 5778889999887655555543321    12233334566789999999


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCC
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      +..++  ..++.+.++++++.+|+
T Consensus       155 ~~G~~--~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         155 IFGGF--KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             SGGGC--CHHHHHHHHHHHHHTTS
T ss_pred             EEeCC--CHHHHHHHHHHHHHCcC
Confidence            87654  12567889999998875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.1e-28  Score=175.82  Aligned_cols=168  Identities=21%  Similarity=0.279  Sum_probs=136.1

Q ss_pred             CcchhhhccchhHHHHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc
Q 027106           11 PLSYQVGILGFSGLTAYAGLF---EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD   87 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~   87 (228)
                      ++. ++|++++++.|||++++   +.+...++++|||+||+|++|.+++|+||.+|++|+++++++++.+.++ ++|+++
T Consensus         2 ~~~-~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~   79 (177)
T d1o89a2           2 DAR-KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASR   79 (177)
T ss_dssp             CHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEE
T ss_pred             CHH-HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccc
Confidence            455 89999999999998764   3344556679999999999999999999999999999999999999999 999999


Q ss_pred             eeeccChhhHHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           88 AFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      ++|+++. ++.+   .+.+..+|.++|++|++.+..++++++++|+++.+|...+.     ..+.+...++.+++++.|+
T Consensus        80 vi~~~~~-~~~~---~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDEF-AESR---PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGGS-SSCC---SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEEC
T ss_pred             ccccccH-HHHH---HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEE
Confidence            9998764 4322   22334689999999999999999999999999999977643     3456778889999999998


Q ss_pred             ecccc-hhHHHHHHHHHHHHHHc
Q 027106          168 LAADH-LNLYQDFISTTCNHLRS  189 (228)
Q Consensus       168 ~~~~~-~~~~~~~~~~~~~~~~~  189 (228)
                      ..... ++...+.|+++.+.+.+
T Consensus       151 ~~~~~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         151 DSVMTPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             CSSSCCHHHHHHHHHHHHHHSCH
T ss_pred             ecccCCHHHHHHHHHHHHHhccc
Confidence            66443 55555667776665444

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=1e-26  Score=167.74  Aligned_cols=171  Identities=16%  Similarity=0.157  Sum_probs=136.4

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      |++ ++|.+.|++.|+|+++.+.+++++||+|+|+|+ |++|++++++++..|+ +|++++++++|++.++ ++|+++++
T Consensus         2 P~e-~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~i   78 (175)
T d1cdoa2           2 PLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFV   78 (175)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEE
T ss_pred             CHH-HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEE
Confidence            455 799999999999999988899999999999995 9999999999999987 8999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCC-CCccEEEcCcch-hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeece
Q 027106           90 NYKEETDLKAALKRYFP-DGIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGF  167 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~-~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (228)
                      |+.+..+......+.+. +|+|+++|++|+ ..+..++.+++++|.++.++...+.     ....+....+.++.++.|+
T Consensus        79 n~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~-----~~~~~~~~~~~~~~~i~Gs  153 (175)
T d1cdoa2          79 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQLIAGRTWKGS  153 (175)
T ss_dssp             CGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHHHTTCEEEEC
T ss_pred             cCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC-----cccCccHHHHHCCcEEEEE
Confidence            98754234455555544 499999999997 5778888888887655554433321     2244556667788999998


Q ss_pred             ecccchhHHHHHHHHHHHHHHcCC
Q 027106          168 LAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ...++.  .++.+.++++++.+|+
T Consensus       154 ~~G~~~--~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         154 MFGGFK--GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             SGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EEeCCc--HHHHHHHHHHHHHcCC
Confidence            876642  2578889999999885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=9.7e-27  Score=167.49  Aligned_cols=169  Identities=20%  Similarity=0.246  Sum_probs=133.1

Q ss_pred             CcchhhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCcee
Q 027106           11 PLSYQVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAF   89 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~   89 (228)
                      |++ .+|.+.|.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++++++++ ++|+++++
T Consensus         3 P~e-~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~i   79 (176)
T d1d1ta2           3 PPE-KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECI   79 (176)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEE
T ss_pred             CHH-HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEE
Confidence            455 799999999999999988899999999999995 9999999999999996 8999999999999999 99999999


Q ss_pred             eccChhhHHHHHHHHCCC-CccEEEcCcchh-HHHHHHHccccC-cEEEEEeeecccCCCcCCCccchHHHHhhhceeec
Q 027106           90 NYKEETDLKAALKRYFPD-GIDIYFDNVGAE-MQEAAIANMNTY-GRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQG  166 (228)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (228)
                      |+.+.......+.+.+.+ |+|+++|++|.. .+..++..+.++ |+++.+|.....    .....++.. +.++.++.|
T Consensus        80 n~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~~~~i~G  154 (176)
T d1d1ta2          80 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDPML-LFTGRTWKG  154 (176)
T ss_dssp             CGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECTHH-HHTTCEEEE
T ss_pred             CccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCHHH-HhCCCEEEE
Confidence            987652334555555555 999999999984 777778777665 999999976542    122333343 446889999


Q ss_pred             eecccchhHHHHHHHHHHHHHHc
Q 027106          167 FLAADHLNLYQDFISTTCNHLRS  189 (228)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~  189 (228)
                      ++.++...  ++.+.++++++.+
T Consensus       155 s~~G~~~~--~~dip~li~~~~~  175 (176)
T d1d1ta2         155 CVFGGLKS--RDDVPKLVTEFLA  175 (176)
T ss_dssp             CSGGGCCH--HHHHHHHHHHHTT
T ss_pred             EEEeCCCc--HHHHHHHHHHHhC
Confidence            88765311  4566676666543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=1.5e-27  Score=169.80  Aligned_cols=144  Identities=23%  Similarity=0.297  Sum_probs=118.2

Q ss_pred             hhHHHHHHH---HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhH
Q 027106           21 FSGLTAYAG---LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDL   97 (228)
Q Consensus        21 ~~~~ta~~~---l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   97 (228)
                      +++.|||.+   |.+.+..++|++|||+||+|++|.+++|+||.+|++|+++++++++.+.++ ++|+++++++++  ..
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~   79 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HC
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hh
Confidence            455677644   545566778889999999999999999999999999999999999999999 999999887652  22


Q ss_pred             HHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccc
Q 027106           98 KAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADH  172 (228)
Q Consensus        98 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (228)
                      .+.+....++++|+|||+.|++.++.++++|+++|+++.+|...+.     ..+.+...++.+++++.|+.....
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~~  149 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYC  149 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSC
T ss_pred             chhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCCC
Confidence            2223333334999999999999999999999999999999987743     346778899999999999765543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=2.5e-25  Score=162.47  Aligned_cols=168  Identities=17%  Similarity=0.151  Sum_probs=136.5

Q ss_pred             hhhccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccC
Q 027106           15 QVGILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKE   93 (228)
Q Consensus        15 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~   93 (228)
                      +.++|..++.|||+++ +.+++++|++|||+|+ |++|++++++|+..|+ +|++++.+++|++.++ ++|+++++++.+
T Consensus         3 d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~   79 (195)
T d1kola2           3 DLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLD   79 (195)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSS
T ss_pred             hHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCC
Confidence            5788999999999998 6799999999999995 9999999999999998 8999999999999999 999999988887


Q ss_pred             hhhHHHHHHHHCCC-CccEEEcCcch----------------hHHHHHHHccccCcEEEEEeeecccCC-------CcCC
Q 027106           94 ETDLKAALKRYFPD-GIDIYFDNVGA----------------EMQEAAIANMNTYGRVAVCGVISEYTD-------GKKR  149 (228)
Q Consensus        94 ~~~~~~~~~~~~~~-~~d~vld~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~-------~~~~  149 (228)
                      . ++.+.+.+++++ ++|++||++|.                +.++.++++++++|+++.+|.+.+..-       ....
T Consensus        80 ~-~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~  158 (195)
T d1kola2          80 T-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGS  158 (195)
T ss_dssp             S-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTC
T ss_pred             c-CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCc
Confidence            6 999999999887 99999999983                489999999999999999997553210       0011


Q ss_pred             CccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCC
Q 027106          150 AAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGA  191 (228)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  191 (228)
                      ....+...+.+++++.+-..     ..+.+++++++++.+++
T Consensus       159 ~~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         159 LSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             eeeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            23444556677777653211     12466778888887764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=6.4e-18  Score=102.70  Aligned_cols=73  Identities=27%  Similarity=0.398  Sum_probs=66.1

Q ss_pred             CcchhhhccchhHHHHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           11 PLSYQVGILGFSGLTAYAGLF---EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        11 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      |+. +++++++++.|||++++   +....+++++|||+||+|++|.+++|+++.+|++|+++++++++.++++ ++|+
T Consensus         2 s~~-eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           2 DAR-KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             CHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             CHH-HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            556 89999999999998875   3456789999999999999999999999999999999999999999999 8884

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.82  E-value=2.8e-08  Score=68.32  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +..+|+|.|+ |..|+.+++.|+.+|++|.+++.+.++++.+++.++........+.+.+.+.+.+     .|+||.++-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-----aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAE-----ADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHT-----CSEEEECCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhcc-----CcEEEEeee
Confidence            4569999996 9999999999999999999999999999999845554222222322255555553     799999763


Q ss_pred             --h-h----HHHHHHHccccCcEEEEEeeecccCCCc
Q 027106          118 --A-E----MQEAAIANMNTYGRVAVCGVISEYTDGK  147 (228)
Q Consensus       118 --~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~  147 (228)
                        + .    .-.++++.|++|+.+|.+....+++++.
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~Et  141 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVET  141 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTT
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcccc
Confidence              2 1    5578899999999999999887777643

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.66  E-value=4.4e-08  Score=72.52  Aligned_cols=80  Identities=11%  Similarity=0.185  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vld  114 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++++... ..|..+.++..+.+.+...  +++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            58999999999999999999999999999999999999888876677633 2455554344433333222  47999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            887

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.64  E-value=1.4e-07  Score=67.12  Aligned_cols=85  Identities=20%  Similarity=0.175  Sum_probs=61.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----C-CceeeccChhhHHHHHHH
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----F-DDAFNYKEETDLKAALKR  103 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~  103 (228)
                      .......--+|++|+|+||+|++|..+++.+...|++|++++++.++.+.+.+++.    . ....|..+.++    +.+
T Consensus        13 ~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~   88 (191)
T d1luaa1          13 VVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDAS----RAE   88 (191)
T ss_dssp             HHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHH----HHH
T ss_pred             HHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHH----HHH
Confidence            33333445689999999999999999999999999999999999998877764443    2 22344444312    233


Q ss_pred             HCCCCccEEEcCcch
Q 027106          104 YFPDGIDIYFDNVGA  118 (228)
Q Consensus       104 ~~~~~~d~vld~~g~  118 (228)
                      .. +++|++|+++|.
T Consensus        89 ~~-~~iDilin~Ag~  102 (191)
T d1luaa1          89 AV-KGAHFVFTAGAI  102 (191)
T ss_dssp             HT-TTCSEEEECCCT
T ss_pred             Hh-cCcCeeeecCcc
Confidence            22 369999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=8.5e-08  Score=71.06  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      -+|+++||+||++++|.+.++.+...|++|+++++++++++.+.++++...  .+|..+.+.....+.++  +++|++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~--g~iDilVn   82 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV--GPVDLLVN   82 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh--CCceEEEe
Confidence            378999999999999999999999999999999999999888775665422  34555542333333222  47999999


Q ss_pred             Ccc
Q 027106          115 NVG  117 (228)
Q Consensus       115 ~~g  117 (228)
                      ++|
T Consensus        83 nAg   85 (244)
T d1pr9a_          83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=1.2e-07  Score=70.22  Aligned_cols=78  Identities=15%  Similarity=0.182  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++++...  .+|..+.+...+.+.++  +++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence            68999999999999999999999999999999999998877765665422  24555542333333222  479999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            77

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=7e-08  Score=71.46  Aligned_cols=105  Identities=23%  Similarity=0.377  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHC--CCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYF--PDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++++.+.++++..   ...|..+.++..+.+.+..  .+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5899999999999999999999999999999999999988887677642   2345554423333333322  2479999


Q ss_pred             EcCcchh-----------H---------------HHHHHHccc--cCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------M---------------QEAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      ++++|..           .               .+.+++.|.  .+|+++.+++..+
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9987621           1               133556663  4799999987554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.58  E-value=7.7e-08  Score=71.82  Aligned_cols=80  Identities=14%  Similarity=0.248  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++++.+.+++|...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            58999999999999999999999999999999999998888776888643   2355554344444433322  479999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        84 VnnAg   88 (256)
T d1k2wa_          84 VNNAA   88 (256)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99887

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.58  E-value=8.7e-08  Score=70.93  Aligned_cols=105  Identities=18%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            68999999999999999999999999999999999999888776776422   2344444344443433322  479999


Q ss_pred             EcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      ++++|..           .|               +.+++.+.  .+|++|.++...+
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            9988731           12               22344443  4699999987665

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.1e-07  Score=70.59  Aligned_cols=105  Identities=17%  Similarity=0.156  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.++++...  ..|..+.++..+.+.+...  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999999999999988885655422  2355554344444433322  4799999


Q ss_pred             cCcch-h-----------HH---------------HHHHHcccc-CcEEEEEeeecc
Q 027106          114 DNVGA-E-----------MQ---------------EAAIANMNT-YGRVAVCGVISE  142 (228)
Q Consensus       114 d~~g~-~-----------~~---------------~~~~~~l~~-~G~~v~~g~~~~  142 (228)
                      +++|. .           .|               +.+++.|+. +|+++.++...+
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            98872 1           12               334555544 589999887554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.55  E-value=1.1e-07  Score=71.70  Aligned_cols=80  Identities=24%  Similarity=0.263  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.+++|...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            68999999999999999999999999999999999999887776777522   2344444233333333222  479999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99886

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.55  E-value=1.1e-07  Score=70.91  Aligned_cols=105  Identities=17%  Similarity=0.180  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.++++..   ...|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            6899999999999999999999999999999999999888777577642   12344444344333333222  479999


Q ss_pred             EcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      ++++|..           .+               +.+++.+.  .+|++|.+++..+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9988721           11               23344443  3699999997664

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1e-07  Score=71.89  Aligned_cols=103  Identities=19%  Similarity=0.360  Sum_probs=70.0

Q ss_pred             CCCEE-EEEcCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-c--eeeccChhhHH---HHHHHHCC
Q 027106           38 KGEKV-FVSAASGSVGHLVGQ-YAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-D--AFNYKEETDLK---AALKRYFP  106 (228)
Q Consensus        38 ~g~~V-lI~ga~g~~G~~a~~-~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~---~~~~~~~~  106 (228)
                      +|.+| ||+||++|+|+++++ +++..|++|++++++.++.+.+.+++   |.. .  .+|..+.++..   +.+.+.. 
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            36677 899999999998876 45556899999999999887765444   332 1  23555542333   3333322 


Q ss_pred             CCccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          107 DGIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       107 ~~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +++|++++++|..                          ..+.+++.|++.|+++.++...
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence            4799999998731                          1244567778899999988643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.54  E-value=2.2e-07  Score=64.61  Aligned_cols=106  Identities=15%  Similarity=0.057  Sum_probs=76.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee-ccChh------------------hHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN-YKEET------------------DLK   98 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~------------------~~~   98 (228)
                      +.-+|+|.|+ |..|+.|++.|+.+|++|.+++.+.++++.++ +++...+.. .....                  ...
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            3459999996 99999999999999999999999999999999 877643210 00000                  011


Q ss_pred             HHHHHHCCCCccEEEcCcc---hh----HHHHHHHccccCcEEEEEeeecccCCC
Q 027106           99 AALKRYFPDGIDIYFDNVG---AE----MQEAAIANMNTYGRVAVCGVISEYTDG  146 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~  146 (228)
                      +.+.+.. ...|+||-++-   ..    .-+++++.|+||+.+|.+....+++.+
T Consensus       106 ~~l~~~l-~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~E  159 (183)
T d1l7da1         106 EAVLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP  159 (183)
T ss_dssp             HHHHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred             HHHHHHH-HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccc
Confidence            1222211 14899998763   21    557889999999999999988887764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.53  E-value=2.1e-07  Score=69.87  Aligned_cols=80  Identities=16%  Similarity=0.324  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c----eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D----AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~----~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++++.. .    ..|..+.++..+.+.+...  +++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6899999999999999999999999999999999999988887666642 1    2354544344444433222  4799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        85 ~lVnnAG   91 (268)
T d2bgka1          85 IMFGNVG   91 (268)
T ss_dssp             EEEECCC
T ss_pred             eeccccc
Confidence            9999876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.52  E-value=1.4e-07  Score=69.95  Aligned_cols=105  Identities=14%  Similarity=0.142  Sum_probs=75.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCC--CCccEEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFP--DGIDIYF  113 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~--~~~d~vl  113 (228)
                      -+|+++||+||++++|.+.++.+...|++|++++++++..+.++ +.+... ..|..+.++..+.+.+...  +++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            47899999999999999999999999999999999988877776 777633 2455554343333333322  4799999


Q ss_pred             cCcchh-----------HH---------------HHHHHcccc--CcEEEEEeeecc
Q 027106          114 DNVGAE-----------MQ---------------EAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       114 d~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      +++|..           .+               +.+++.|.+  +|++|.++...+
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            988721           12               334566644  689999987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.50  E-value=1.7e-07  Score=69.74  Aligned_cols=105  Identities=20%  Similarity=0.192  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce---eeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA---FNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++....   .|..+.++..+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            689999999999999999999999999999999999998888767876432   244443233333333222  479999


Q ss_pred             EcCcchh-----------H---------------HHHHHHccc-cCcEEEEEeeecc
Q 027106          113 FDNVGAE-----------M---------------QEAAIANMN-TYGRVAVCGVISE  142 (228)
Q Consensus       113 ld~~g~~-----------~---------------~~~~~~~l~-~~G~~v~~g~~~~  142 (228)
                      ++++|..           .               .+.+++.|+ .+|+++.+++..+
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9988731           1               233455664 4799999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.4e-07  Score=68.14  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Cc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF----DD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      .|+++||+||++|+|.+.++.+...|++|++++++.++++.+.+++..    ..    ..|..+.++..+.+.+...  +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999999888776645422    11    2355554344444443322  4


Q ss_pred             CccEEEcCcchh------------------HHHHHHHcccc-----CcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE------------------MQEAAIANMNT-----YGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~  142 (228)
                      ++|++++++|..                  ....+++.|.+     +|+++.+++..+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            799999998831                  12334455543     488999987654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.48  E-value=2.2e-07  Score=69.02  Aligned_cols=80  Identities=10%  Similarity=0.126  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-c----eeeccChhhHHHHHHHHCC--CCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-D----AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~----~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++++.. .    ..|..+.++..+.+.+...  +++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5899999999999999999999999999999999999888877666531 1    2344444233333333222  4799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        85 iLVnnAg   91 (251)
T d1zk4a1          85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.47  E-value=2.6e-07  Score=68.97  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhH---HHHHHHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDL---KAALKRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~---~~~~~~~~~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++++.+.++   .+...   ..|..+.++.   .+.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999999887665533   33322   2355544233   33344444457


Q ss_pred             ccEEEcCcch
Q 027106          109 IDIYFDNVGA  118 (228)
Q Consensus       109 ~d~vld~~g~  118 (228)
                      +|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999998873

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.44  E-value=3.3e-07  Score=67.65  Aligned_cols=104  Identities=12%  Similarity=0.154  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~v  112 (228)
                      +|+++||+||++++|.+.++-+...|++|+++.++.++++.+.++++...   ..|.++.++..+.+.+...  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68999999999999999999999999999999999998887776777533   2355554344444443332  479999


Q ss_pred             EcCcchh-----------H---------------HHHHHHccccCcEEEEEeeec
Q 027106          113 FDNVGAE-----------M---------------QEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       113 ld~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +++++..           .               .+..++.+..++.++.++...
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            9987632           1               133456777778777776544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.43  E-value=3.4e-07  Score=68.39  Aligned_cols=105  Identities=18%  Similarity=0.289  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.+++   |...   ..|..+.++..+.+.+...  +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998887665443   3321   2344444344333333222  479


Q ss_pred             cEEEcCcchh------------HH---------------HHHHHcc--ccCcEEEEEeeecc
Q 027106          110 DIYFDNVGAE------------MQ---------------EAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~------------~~---------------~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      |++++++|..            .+               +.+++.+  +.+|++|.+++..+
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            9999987621            11               2334544  45799999987654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.43  E-value=3.7e-07  Score=68.12  Aligned_cols=105  Identities=15%  Similarity=0.216  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHH---HHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALK---RYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~---~~~~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.+++   |...   ..|..+.++..+.+.   +..+++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999999999999998887665443   3211   234444423333333   333346


Q ss_pred             ccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +|++++++|..           .+               +.+++.+.  .+|+++.+++..+
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999988721           11               33445553  4699999987654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.7e-07  Score=68.22  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---ceeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD---DAFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .|+++||+||++|+|...+..+...|++|+++++++++++.+.++   .|..   ...|..+.++..+.+....  .+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999988888999999999999988766543   3332   1345555434343443332  2469


Q ss_pred             cEEEcCcchh-----------HH---------------HHHHHcccc--CcEEEEEeeecc
Q 027106          110 DIYFDNVGAE-----------MQ---------------EAAIANMNT--YGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~  142 (228)
                      |++++++|..           .+               +.+++.|..  .|+++.+++..+
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            9999988731           11               234555544  588999887654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.4e-07  Score=68.25  Aligned_cols=81  Identities=25%  Similarity=0.399  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-DD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++   +. ..    ..|..++++..+.+.+...  +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998877765333   22 12    2355554344444433322  4


Q ss_pred             CccEEEcCcch
Q 027106          108 GIDIYFDNVGA  118 (228)
Q Consensus       108 ~~d~vld~~g~  118 (228)
                      ++|++++++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999998873

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.42  E-value=3.5e-07  Score=68.76  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Cc----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF--DD----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.+++   +.  ..    ..|..+.++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999999999998887765443   22  11    2355554344333433322  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            47999999876

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.40  E-value=6.1e-07  Score=66.56  Aligned_cols=104  Identities=17%  Similarity=0.256  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD----KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.++.+.+.+    ++|...   ..|..+.++..+.+.+...  ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999887654432    455432   2355554344333433322  47


Q ss_pred             ccEEEcCcchh--------------------------HHHHHHHcccc--CcEEEEEeeec
Q 027106          109 IDIYFDNVGAE--------------------------MQEAAIANMNT--YGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  141 (228)
                      +|++++++|..                          ..+.+++.|..  +|+++.++...
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            99999988731                          12445667743  68999988644

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.39  E-value=1.1e-07  Score=70.18  Aligned_cols=103  Identities=13%  Similarity=0.157  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCC-CccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPD-GIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~-~~d~vld~  115 (228)
                      +|++|||+||++++|.+.++.+...|++|+.+++++.+... . ..... ...+..+.+.....+.+.... ++|+++++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInn   78 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-A-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV   78 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-E-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-c-cceeecccCcHHHHHHHHHHHHHHhCCCCceEEEEC
Confidence            58999999999999999999999999999998865433110 0 00000 000111111223333333333 79999998


Q ss_pred             cch----h--------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          116 VGA----E--------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       116 ~g~----~--------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|.    .        .+               +.+++.|+++|+++.++...+
T Consensus        79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          79 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            762    1        11               234567888999999987654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.39  E-value=9e-07  Score=65.92  Aligned_cols=105  Identities=16%  Similarity=0.179  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cc----eeeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GF-DD----AFNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~----~~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.+++   +. ..    ..|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999998876654332   21 12    2355554344444433322  4


Q ss_pred             CccEEEcCcch--h----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGA--E----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~--~----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      ++|++++++|.  .          .|               +.+++.+.  .+|+++.+++..+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            79999998762  1          11               22344443  4799999987664

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=2.8e-07  Score=68.65  Aligned_cols=80  Identities=21%  Similarity=0.280  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~  109 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|...   ..|..+.++....+.+...  +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999998887765533   34322   2344444233333333222  479


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        90 DilvnnAG   97 (255)
T d1fmca_          90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEeeeCCc
Confidence            99999887

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.37  E-value=2.8e-07  Score=68.75  Aligned_cols=105  Identities=19%  Similarity=0.286  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---ceeeccChhhHHHHH---HHHCCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD---DAFNYKEETDLKAAL---KRYFPDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~---~~~~~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|+.+++++++++.+.+++   +..   ...|..+.++..+.+   .+..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998887665443   221   123554442333333   3333346


Q ss_pred             ccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +|++++++|..           .+               +.+++.|.  .+|+++.++...+
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            99999988731           11               33445553  4689999887554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=4.3e-07  Score=67.18  Aligned_cols=78  Identities=15%  Similarity=0.288  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|+++||+||++++|.+.++.+...|++|+++++++++++.+.+..+.. ...|.... +..+...+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            6899999999999999999999999999999999999888777444442 23344443 4444444433 3699999987


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        83 g   83 (245)
T d2ag5a1          83 G   83 (245)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=5.1e-07  Score=68.67  Aligned_cols=81  Identities=19%  Similarity=0.267  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------CCc---eeeccChhhHHHHHHHHC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG--------FDD---AFNYKEETDLKAALKRYF  105 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g--------~~~---~~~~~~~~~~~~~~~~~~  105 (228)
                      -+|+++||+||++|+|.+.++.+...|++|++++++.++++.+.+++.        ...   ..|..+.++..+.+.+..
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999888766554431        111   234454434444443332


Q ss_pred             C--CCccEEEcCcc
Q 027106          106 P--DGIDIYFDNVG  117 (228)
Q Consensus       106 ~--~~~d~vld~~g  117 (228)
                      .  +++|++++++|
T Consensus        90 ~~~G~iDiLVnnAg  103 (297)
T d1yxma1          90 DTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHhCCeEEEEeecc
Confidence            2  47999999877

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.36  E-value=5.8e-07  Score=64.89  Aligned_cols=112  Identities=17%  Similarity=0.174  Sum_probs=77.3

Q ss_pred             ccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccCh
Q 027106           18 ILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEE   94 (228)
Q Consensus        18 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~   94 (228)
                      .+..+...|. .+ +..++++|++||..|  +|.|..++-+|+..|.+|+.++..++-.+.+++   ++|.+.+..... 
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            3444555554 34 668899999999999  788999999999889889999998876655543   467655433222 


Q ss_pred             hhHHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106           95 TDLKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        95 ~~~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                       +.....  ...+.||+|+-+.+. ..-+..++.|++||++|..
T Consensus       135 -d~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 -DGSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -ccccCC--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence             111000  112379999876654 4556778999999999983

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.35  E-value=5e-07  Score=67.94  Aligned_cols=80  Identities=18%  Similarity=0.298  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--c----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFD--D----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|..  .    ..|..+.++..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999999999887766533   3321  1    2355554343333333322  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            47999999876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.34  E-value=9.9e-06  Score=55.47  Aligned_cols=78  Identities=22%  Similarity=0.234  Sum_probs=59.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      +..+--.+.+|||.|+ |.+|...++.+...|+ +++++.|+.++.+.+.+++|.. ..+.+   ++.+.+.     .+|
T Consensus        17 ~~~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~-----~~D   86 (159)
T d1gpja2          17 RELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLA-----RSD   86 (159)
T ss_dssp             HHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHH-----TCS
T ss_pred             HHhCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhc-----cCC
Confidence            4444457889999996 9999999999999998 7999999988887666588853 33333   4455554     389


Q ss_pred             EEEcCcchh
Q 027106          111 IYFDNVGAE  119 (228)
Q Consensus       111 ~vld~~g~~  119 (228)
                      +||.|++.+
T Consensus        87 ivi~atss~   95 (159)
T d1gpja2          87 VVVSATAAP   95 (159)
T ss_dssp             EEEECCSSS
T ss_pred             EEEEecCCC
Confidence            999999853

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.34  E-value=5.2e-07  Score=67.48  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--c----eeeccChhhHHHHHHHHCC--
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD--D----AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~----~~~~~~~~~~~~~~~~~~~--  106 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.+++   |..  .    ..|..+.++..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6889999999999999999999999999999999998887665443   221  1    2355554344333333322  


Q ss_pred             CCccEEEcCcc
Q 027106          107 DGIDIYFDNVG  117 (228)
Q Consensus       107 ~~~d~vld~~g  117 (228)
                      +++|++++++|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            47999999877

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.33  E-value=6.1e-07  Score=66.82  Aligned_cols=79  Identities=16%  Similarity=0.261  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGID  110 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d  110 (228)
                      |+.+||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|...   ..|..+.++..+.+.+...  +++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            67889999999999999999999999999999998887766533   34322   2354454344333333222  4799


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      ++++++|
T Consensus        82 ilVnnAG   88 (257)
T d2rhca1          82 VLVNNAG   88 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.30  E-value=7.4e-07  Score=66.11  Aligned_cols=105  Identities=16%  Similarity=0.318  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC--CCCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      .++++||+||++|+|.+.++.+...|++|+++++++++++.+.+++   |...   ..|..+.++..+.+.+..  .+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4789999999999999999988889999999999998887665443   3321   235554433333333322  2479


Q ss_pred             cEEEcCcchh-----------HH---------------HHHHHcc--ccCcEEEEEeeecc
Q 027106          110 DIYFDNVGAE-----------MQ---------------EAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       110 d~vld~~g~~-----------~~---------------~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      |++++++|..           .+               +.+++.+  +.+|++|.+++..+
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            9999987631           22               2334444  34699999987553

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.29  E-value=1.6e-06  Score=62.59  Aligned_cols=108  Identities=24%  Similarity=0.247  Sum_probs=73.0

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCceeeccChhh
Q 027106           22 SGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETD   96 (228)
Q Consensus        22 ~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~   96 (228)
                      +...|. .+ +..++++|++||-.|  +|.|..++.+|+..|.  +|++++.+++..+.+++.   .+...+.....  +
T Consensus        61 P~~~a~-~l-~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d  134 (213)
T d1dl5a1          61 PSLMAL-FM-EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--D  134 (213)
T ss_dssp             HHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--C
T ss_pred             chhhHH-HH-HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--c
Confidence            333444 34 678899999999999  5558888899998764  899999999988887743   34433221111  1


Q ss_pred             HHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106           97 LKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      ..+..  ...+.||+|+.+.+- ...+..++.|+|||+++..
T Consensus       135 ~~~~~--~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         135 GYYGV--PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGGCC--GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hHHcc--ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            10000  011369999987664 3446778999999999883

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.29  E-value=6.5e-07  Score=66.81  Aligned_cols=80  Identities=11%  Similarity=0.145  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCCc---eeeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD----KLGFDD---AFNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+    ++|...   ..|..+.++..+.+.+..  -++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999998766544322    455432   235555434433333322  247


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999886

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=98.27  E-value=1.1e-06  Score=63.73  Aligned_cols=109  Identities=13%  Similarity=0.065  Sum_probs=72.5

Q ss_pred             cchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Cce-eeccChhh
Q 027106           19 LGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF-DDA-FNYKEETD   96 (228)
Q Consensus        19 l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~   96 (228)
                      +..+...|. .+ +...+++|++||-.|  +|.|..++.+|+. +.+|+.++.+++..+.+++.+.. ..+ +...+.  
T Consensus        53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--  125 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG--  125 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--
T ss_pred             eehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCch--
Confidence            334444454 34 668899999999999  5678888777775 67999999999988888844332 111 111111  


Q ss_pred             HHHHHHHHCCCCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106           97 LKAALKRYFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                       .....  ..++||+|+-+.+. ...+..++.|++||++|..
T Consensus       126 -~~g~~--~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         126 -TLGYE--EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             -GGCCG--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -hhcch--hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence             00000  11369998866554 4556778999999999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.27  E-value=2.6e-06  Score=63.81  Aligned_cols=104  Identities=21%  Similarity=0.285  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++ ++..+.+.+   +.|.+.   ..|..+.++....+.+...  ++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999998765 444443321   445432   2344554344444443322  47


Q ss_pred             ccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          109 IDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       109 ~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +|+++++++..                          ..+.+++.|..+|+++.++...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            99999877621                          1244567888889888887654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.27  E-value=9.8e-07  Score=66.97  Aligned_cols=80  Identities=11%  Similarity=0.221  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCCc-e--eeccChhhHHHHHHHHC--CCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD----KLGFDD-A--FNYKEETDLKAALKRYF--PDG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~~--~~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+    +.|... .  .|..+.++..+.+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            57999999999999999999999999999999999887654432    344422 1  34444423333332222  247


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus       104 iDilvnnAg  112 (294)
T d1w6ua_         104 PNIVINNAA  112 (294)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            999999887

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.25  E-value=7.3e-06  Score=61.84  Aligned_cols=105  Identities=10%  Similarity=0.053  Sum_probs=74.3

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      +..+.+..++++|++||=+|  .|.|-.+..+|+..|++|++++.++++.+.+++   +.|....+..... ++     .
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~  121 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----E  121 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----G
T ss_pred             HHHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----c
Confidence            44455778999999999999  566777889999999999999999998776653   3455432222211 21     1


Q ss_pred             HCCCCccEEEc-----Ccch-----------hHHHHHHHccccCcEEEEEee
Q 027106          104 YFPDGIDIYFD-----NVGA-----------EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       104 ~~~~~~d~vld-----~~g~-----------~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..++.||.|+.     ..+.           ..++.+.++|+|||++++-..
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence            22457998864     2221           368889999999999997543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.23  E-value=2.1e-06  Score=63.45  Aligned_cols=105  Identities=15%  Similarity=0.183  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKDKLGFDD---AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++++ ..+...++.|...   ..|..+.++....+.+...  +++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5889999999999999999999999999999997653 2233332666532   2355554344333333322  47999


Q ss_pred             EEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          112 YFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       112 vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      +++++|..           .|               +.+++.|.  .+|+++.+++..+
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99988731           22               23455554  3699999887654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.23  E-value=1.6e-06  Score=64.68  Aligned_cols=80  Identities=20%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE-KVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||++++|.+.++.+...|++|+++.++.+ ..+.+.+   +.|...   ..|..+.++..+.+.+...  ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999998899999999998643 4433322   445421   2355554343333333222  47


Q ss_pred             ccEEEcCcc
Q 027106          109 IDIYFDNVG  117 (228)
Q Consensus       109 ~d~vld~~g  117 (228)
                      +|++++++|
T Consensus        86 iDiLVnnAG   94 (261)
T d1geea_          86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeccce
Confidence            999999887

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.22  E-value=4.2e-06  Score=57.92  Aligned_cols=74  Identities=22%  Similarity=0.129  Sum_probs=57.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      .| +..++.++++|+|.|+ ||.+.+++..++..|+ +|+++.|+.++.+.+.+.++...+ +...            ..
T Consensus         8 ~l-~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~   72 (167)
T d1npya1           8 LI-EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQ   72 (167)
T ss_dssp             HH-HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TC
T ss_pred             HH-HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------cc
Confidence            44 5567778899999995 9999999999999998 899999999998888756765432 2111            12


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      .+|+|++|++
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            5899999976

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.22  E-value=3.6e-07  Score=67.17  Aligned_cols=103  Identities=17%  Similarity=0.128  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHH-CCCCccEEEcCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRY-FPDGIDIYFDNVG  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vld~~g  117 (228)
                      +.+|||+||++++|.+.++.+...|++|+.+++++++..... ..-...+-+..+.....+.+... ..+++|++++++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG   80 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG   80 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccccc-ceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCc
Confidence            357999999999999999999999999999998754311100 00000000011111122222222 3347999999877


Q ss_pred             h----h--------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          118 A----E--------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       118 ~----~--------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      .    .        .+               +.+++.|+++|+++.++....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          81 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             ccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            2    1        11               334667888999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.21  E-value=4.1e-06  Score=61.33  Aligned_cols=72  Identities=26%  Similarity=0.308  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|+++||+||++++|.+.++.+...|++|++++++++.++    +.+... ..|.++  +. +.+.+.. +++|++++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~-~~~~~~~-g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DL-DLLFEKV-KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CH-HHHHHHS-CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HH-HHHHHHh-CCCcEEEecc
Confidence            5899999999999999999999999999999999876543    444432 223332  22 2333322 4699999988


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      |
T Consensus        75 G   75 (234)
T d1o5ia_          75 G   75 (234)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.21  E-value=2.8e-06  Score=63.25  Aligned_cols=106  Identities=16%  Similarity=0.258  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH----HhCCCce---eeccChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS-KEKVTLLKD----KLGFDDA---FNYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~~~--~  107 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++.++ .+..+.+.+    +.|....   .|..+.++..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999986 444444332    3454322   355554344333333222  4


Q ss_pred             CccEEEcCcchh-----------HH---------------HHHHHcccc--CcEEEEEeeeccc
Q 027106          108 GIDIYFDNVGAE-----------MQ---------------EAAIANMNT--YGRVAVCGVISEY  143 (228)
Q Consensus       108 ~~d~vld~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~~  143 (228)
                      ++|++++++|..           .+               +.+++.|.+  +|++|.+++..+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            799999988721           11               334555543  6899999876643

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=98.20  E-value=2.5e-06  Score=62.89  Aligned_cols=106  Identities=17%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      +..|....++++|++||=+|  .|.|..+..+++..|++|++++.+++..+.+++   +.|...-+..... ++.+.   
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~~---   95 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAGY---   95 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTTC---
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhhc---
Confidence            34466779999999999999  555667778888889999999999988877763   3455331221111 21111   


Q ss_pred             HCCCCccEEEcCcc-------hhHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFDNVG-------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld~~g-------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..++.||+|+..-.       ...+..+.+.|+|||+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            12348999875321       238888999999999998854

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.20  E-value=5.5e-06  Score=62.35  Aligned_cols=105  Identities=11%  Similarity=0.044  Sum_probs=73.9

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHH
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      ...+.+..++++|++||=+|  .|.|..++.+|+..|++|++++.++++.+.+++.   .|...-+..... ++    +.
T Consensus        51 ~~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~  123 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ  123 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG
T ss_pred             HHHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc
Confidence            34455678899999999999  6788889999999999999999999998888643   233222221111 22    11


Q ss_pred             HCCCCccEEEc-----Ccch----hHHHHHHHccccCcEEEEEee
Q 027106          104 YFPDGIDIYFD-----NVGA----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       104 ~~~~~~d~vld-----~~g~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                       .++.+|.|+.     ..+.    ..+..+.++|+|+|++++-..
T Consensus       124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence             1347888753     3332    267888899999999987443

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=98.20  E-value=2.9e-06  Score=62.53  Aligned_cols=100  Identities=7%  Similarity=-0.013  Sum_probs=69.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHh---CC-CceeeccChhhHHHHHHHHC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKL---GF-DDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~  105 (228)
                      ...+++||++||=.|  .|.|.++..+|+..|.  +|+.++.+++..+.+++.+   +. ..+ ..... ++.+.   ..
T Consensus        79 ~~l~i~pG~rVLEiG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~-Di~~~---~~  151 (250)
T d1yb2a1          79 MRCGLRPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIADF---IS  151 (250)
T ss_dssp             --CCCCTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTTC---CC
T ss_pred             HHcCCCCcCEEEEee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEe-eeecc---cc
Confidence            568899999999998  4557788888888754  8999999999998888433   22 222 22212 22111   12


Q ss_pred             CCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          106 PDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       106 ~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ++.||.|+-....  ..+..+.+.|+|||+++.+.
T Consensus       152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         152 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             cceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            2379988744443  48899999999999999864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.19  E-value=9.5e-07  Score=65.46  Aligned_cols=79  Identities=19%  Similarity=0.171  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhH---HHHHHHHCCC-Cc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDL---KAALKRYFPD-GI  109 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~---~~~~~~~~~~-~~  109 (228)
                      .++|||+||++|+|.+.++.+...|+  +|+.++++.++++.+++..+..   ..+|..+.++.   .+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47999999999999999988777786  7899999999888887333331   12344444233   3333333333 69


Q ss_pred             cEEEcCcc
Q 027106          110 DIYFDNVG  117 (228)
Q Consensus       110 d~vld~~g  117 (228)
                      |++++++|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999987

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.18  E-value=1.9e-06  Score=64.02  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=55.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc---eeeccChhhHHHHHHHHCC--CCccE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD---AFNYKEETDLKAALKRYFP--DGIDI  111 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~~~~~~--~~~d~  111 (228)
                      +.+||+||++|+|.+.++.+...|++|+++++++++++.+.++   .|...   ..|..+.++..+.+.+...  +++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            3569999999999999988888999999999999887766533   34322   2455554343333333222  47999


Q ss_pred             EEcCcc
Q 027106          112 YFDNVG  117 (228)
Q Consensus       112 vld~~g  117 (228)
                      +++++|
T Consensus        82 lVnnAG   87 (255)
T d1gega_          82 IVNNAG   87 (255)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999876

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.16  E-value=3.1e-06  Score=62.94  Aligned_cols=106  Identities=20%  Similarity=0.317  Sum_probs=70.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCCc---eeeccChhhHHHHHHHHCC--
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLKD---KLGFDD---AFNYKEETDLKAALKRYFP--  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~~~~~--  106 (228)
                      .-.|+++||+||++|+|.+.++.+...|++|+++++ +++..+.+.+   +.|.+.   ..|..+.++..+.+.+...  
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999999998754 4444444332   455432   2344443244333433222  


Q ss_pred             CCccEEEcCcchh--------------------------HHHHHHHccccCcEEEEEeeec
Q 027106          107 DGIDIYFDNVGAE--------------------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       107 ~~~d~vld~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +++|++++++|..                          ..+.+++.|+++|+++.+....
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            3799999988731                          2244567788888888776544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2.5e-06  Score=63.86  Aligned_cols=106  Identities=22%  Similarity=0.220  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCc---eeeccChhhHHHHHHHHC--CC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK----LGFDD---AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      -+|+++||+||++|+|.+.++.+...|++|+.+++++++++.+.++    .+...   ..+..+............  .+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999888999999999999988776533    22211   122232212222222211  13


Q ss_pred             CccEEEcCcchh--------------------------HHHHHHHccc-cCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE--------------------------MQEAAIANMN-TYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  142 (228)
                      .+|++++++|..                          ..+.++..|+ .+|+++.+++..+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            688888766521                          1122344454 4789999887664

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=98.13  E-value=1.9e-06  Score=64.26  Aligned_cols=101  Identities=18%  Similarity=0.248  Sum_probs=72.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++++|++||=.|  .|.|..++.+|+..|  .+|+.++.+++..+.+++   ++|....+..... +..   ..+..
T Consensus        97 ~~l~i~pG~~VLDiG--~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~~---~~~~~  170 (266)
T d1o54a_          97 MMLDVKEGDRIIDTG--VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DIS---EGFDE  170 (266)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGG---GCCSC
T ss_pred             HhhCCCCCCEEEECC--CCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-ccc---ccccc
Confidence            678999999999999  455888888999875  599999999998888864   3454222222111 211   11122


Q ss_pred             CCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          107 DGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       107 ~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ..+|.|+--.+.  ..+..+.++|+|||+++.+.
T Consensus       171 ~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         171 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             cceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            378887655554  48899999999999999864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.5e-06  Score=60.63  Aligned_cols=96  Identities=20%  Similarity=0.270  Sum_probs=66.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHh---CC-----Cce-eeccChhhHHHHHH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKL---GF-----DDA-FNYKEETDLKAALK  102 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~-----~~~-~~~~~~~~~~~~~~  102 (228)
                      ..+++|++||-.|  .|.|..++.+|+..|.  +|+.++.+++-.+.+++.+   +.     ..+ +-..+.   .   .
T Consensus        72 ~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~---~---~  143 (224)
T d1i1na_          72 DQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG---R---M  143 (224)
T ss_dssp             TTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG---G---G
T ss_pred             hccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec---c---c
Confidence            3789999999999  6778888999998764  9999999998877775332   22     111 111111   0   0


Q ss_pred             HHC-CCCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106          103 RYF-PDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       103 ~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      ... .+.||+|+.+..- ...+..++.|++||++|..
T Consensus       144 ~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         144 GYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            011 1379999876654 4557788999999999984

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.10  E-value=8.6e-06  Score=61.15  Aligned_cols=104  Identities=14%  Similarity=0.147  Sum_probs=71.4

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHH
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      +..+.+..++++|++||=+|  .|.|..+..+++..|++|++++.+++..+.+++.   .|....+..... ++    +.
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~  113 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED  113 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG
T ss_pred             HHHHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh
Confidence            44455667899999999999  4555667788888999999999999998887743   343222211111 11    11


Q ss_pred             HCCCCccEEEc-----Ccch----hHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFD-----NVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld-----~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                       .++.||.|+.     ..+.    ..+..+.++|+|||++++-.
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence             2347888853     3332    26788899999999998843

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.08  E-value=6.5e-06  Score=60.59  Aligned_cols=102  Identities=23%  Similarity=0.245  Sum_probs=67.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC---ceeeccChhhHHHHHHHHC--CCCccE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSA-GSKEKVTLLKD---KLGFD---DAFNYKEETDLKAALKRYF--PDGIDI  111 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~  111 (228)
                      .|||+||++|+|.+.++.+...|++|++++ ++++..+.+.+   +.|..   ...|..+.++..+.+.+..  .+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            689999999999999999999999998875 56666555442   34532   1235555433333333322  147999


Q ss_pred             EEcCcchh-----------HH---------------HHHHHcc--ccCcEEEEEeeecc
Q 027106          112 YFDNVGAE-----------MQ---------------EAAIANM--NTYGRVAVCGVISE  142 (228)
Q Consensus       112 vld~~g~~-----------~~---------------~~~~~~l--~~~G~~v~~g~~~~  142 (228)
                      +++++|..           .+               +.+++.|  +.+|++|.++...+
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            99988731           12               3345566  45799999987553

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.9e-05  Score=54.69  Aligned_cols=82  Identities=11%  Similarity=0.143  Sum_probs=57.3

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCC
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFP  106 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  106 (228)
                      .+|.+..-..+|++|||.|+ ||.+.+++..+...|++|+++.|+.++.+.+.+.+.....+ ..... +       ...
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~-~-------~~~   77 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD-E-------LEG   77 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG-G-------GTT
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc-c-------ccc
Confidence            44544444568999999995 99999999888889999999999999988777454421111 11111 1       112


Q ss_pred             CCccEEEcCcch
Q 027106          107 DGIDIYFDNVGA  118 (228)
Q Consensus       107 ~~~d~vld~~g~  118 (228)
                      ..+|++++|++.
T Consensus        78 ~~~dliIN~Tp~   89 (170)
T d1nyta1          78 HEFDLIINATSS   89 (170)
T ss_dssp             CCCSEEEECCSC
T ss_pred             cccceeeccccc
Confidence            368999999863

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.07  E-value=5.6e-07  Score=66.20  Aligned_cols=75  Identities=13%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC--CCccEEEcC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP--DGIDIYFDN  115 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vld~  115 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++.+..+.+.     ....|..+.++..+.+.+...  +++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999999999999999999999999999998865533211     122444444233333333222  379999998


Q ss_pred             cc
Q 027106          116 VG  117 (228)
Q Consensus       116 ~g  117 (228)
                      +|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            77

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.07  E-value=7e-06  Score=62.37  Aligned_cols=105  Identities=23%  Similarity=0.269  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHHHh---CCCceeeccChhhHHHHHHHHC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS---------KEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~---------~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~  105 (228)
                      +|+++||+||++|+|.+.++.+...|++|++++++         .+..+.+.+++   +.....+..+.++..+.+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58999999999999999999999999999998643         33333332232   3333344444323333333221


Q ss_pred             --CCCccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          106 --PDGIDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       106 --~~~~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                        .+++|++++++|..           .+               +.+++.|+  .+|++|.+++..+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              24799999998721           12               33455664  4699999987654

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.05  E-value=3.1e-06  Score=61.43  Aligned_cols=109  Identities=19%  Similarity=0.229  Sum_probs=66.6

Q ss_pred             hhHHHHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHc---C----CEEEEEeCCHHHHHHHHHHh--------C
Q 027106           21 FSGLTAYAGLFEI-GKPKKGEKVFVSAASGSVGHLVGQYAKLF---G----CYVVGSAGSKEKVTLLKDKL--------G   84 (228)
Q Consensus        21 ~~~~ta~~~l~~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~---g----~~V~~~~~~~~~~~~~~~~~--------g   84 (228)
                      .+...|. .+... ..+++|++||..|  +|.|..++.+++..   |    .+|+.++..++-.+.+++.+        +
T Consensus        63 ~P~~~a~-~l~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~  139 (223)
T d1r18a_          63 APHMHAF-ALEYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLD  139 (223)
T ss_dssp             CHHHHHH-HHHHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHH-HHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcC
Confidence            3444443 44222 3799999999999  56676666666654   3    38999999887766665221        2


Q ss_pred             CCceeeccChhhHHHHHHHHC-CCCccEEEcCcch-hHHHHHHHccccCcEEEEE
Q 027106           85 FDDAFNYKEETDLKAALKRYF-PDGIDIYFDNVGA-EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~  137 (228)
                      ...+.....  +..   .... .+.||.|+-+.+- ..-+..++.|++||++|..
T Consensus       140 ~~nv~~~~~--d~~---~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         140 SGQLLIVEG--DGR---KGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HTSEEEEES--CGG---GCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccEEEEEec--ccc---cccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            222211111  110   0011 2379988876654 3456778999999999883

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.05  E-value=1.9e-06  Score=63.99  Aligned_cols=105  Identities=17%  Similarity=0.119  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCc----eeecc-ChhhHHHHHHHHCC--C
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK---DKLGFDD----AFNYK-EETDLKAALKRYFP--D  107 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~----~~~~~-~~~~~~~~~~~~~~--~  107 (228)
                      +|++|||+||++|+|.+++..+...|++|+++.++.++.+.+.   ...+...    ..|.. +..+..+.+.+...  +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999888889999988876655443332   1233222    22332 21123333332222  4


Q ss_pred             CccEEEcCcchh---HH---------------HHHHHccc-----cCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE---MQ---------------EAAIANMN-----TYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~---~~---------------~~~~~~l~-----~~G~~v~~g~~~~  142 (228)
                      ++|++++++|..   .+               +.+++.|.     ++|+++.++...+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            799999999841   22               33444453     3589999887654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=98.02  E-value=3.3e-05  Score=56.98  Aligned_cols=98  Identities=18%  Similarity=0.182  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ..++|++||=.|+  |.|..++.++ ..|++|++++.++...+.+++   ..|....+...   +..+.   ...+.||+
T Consensus       117 ~~~~g~~VLDiGc--GsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~---~~~~~fD~  187 (254)
T d2nxca1         117 HLRPGDKVLDLGT--GSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAA---LPFGPFDL  187 (254)
T ss_dssp             HCCTTCEEEEETC--TTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHH---GGGCCEEE
T ss_pred             hcCccCEEEEccc--chhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---ccccc---ccccccch
Confidence            4689999999993  3466666555 468999999999998887773   24443222222   22221   12247999


Q ss_pred             EEcCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106          112 YFDNVGA----EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       112 vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |+.+...    ..+..+.+.|+|||++++.|...
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil~  221 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPGGRALLTGILK  221 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred             hhhccccccHHHHHHHHHHhcCCCcEEEEEecch
Confidence            9875543    25677889999999999977543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.98  E-value=7.2e-06  Score=60.76  Aligned_cols=105  Identities=16%  Similarity=0.134  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCce--eeccChhhHHHHHHHHCC--CC
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDA--FNYKEETDLKAALKRYFP--DG  108 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~--~~~~~~~~~~~~~~~~~~--~~  108 (228)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++..+.+++   ..+....  .|..+.++..+.+.+...  ++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            689999999877  89999999888899999999987664444331   2333222  244444233333332221  47


Q ss_pred             ccEEEcCcchh---------------HH---------------HHHHHccccCcEEEEEeeecc
Q 027106          109 IDIYFDNVGAE---------------MQ---------------EAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       109 ~d~vld~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      +|++++++|..               .+               +.+...++++|+++.++....
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            99999987620               11               123356677899999887654

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=7.7e-06  Score=62.57  Aligned_cols=103  Identities=16%  Similarity=0.128  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhC--------------CCceeeccChh
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLG--------------FDDAFNYKEET   95 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~   95 (228)
                      ...+++||++||=.|  .|.|.+++.+|+..|.  +|+.++.+++..+.+++.+.              .+.+ +.... 
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv-~~~~~-  167 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIHK-  167 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEES-
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccce-eEEec-
Confidence            568899999999998  5669999999999875  89999999998888774321              0111 10000 


Q ss_pred             hHHHHHHHHCCCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106           96 DLKAALKRYFPDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        96 ~~~~~~~~~~~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ++.+.......+.||.||--...  ..+..+.+.|+|||+++.+.
T Consensus       168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111111112368887633333  48899999999999999874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.97  E-value=1.3e-05  Score=58.35  Aligned_cols=105  Identities=12%  Similarity=0.191  Sum_probs=70.6

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCceeeccChhhHHHHHHHH
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      ..|.+.+.+++|++||=.|  .|.|..+..+++ .+.+|++++.++...+.+++.   .|...+- .... +..+  ..+
T Consensus         6 ~~l~~~~~~~~~~rILDiG--cGtG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~-~~~~-d~~~--~~~   78 (234)
T d1xxla_           6 GLMIKTAECRAEHRVLDIG--AGAGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENVR-FQQG-TAES--LPF   78 (234)
T ss_dssp             HHHHHHHTCCTTCEEEEES--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSEE-EEEC-BTTB--CCS
T ss_pred             HHHHHHhCCCCCCEEEEeC--CcCcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhccccccccc-cccc-cccc--ccc
Confidence            3455778999999999999  566777777776 468999999999888777632   3333221 1111 1100  011


Q ss_pred             CCCCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          105 FPDGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       105 ~~~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..+.||+|+.+-.     .  ..+..+.+.|+|+|+++....
T Consensus        79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~  120 (234)
T d1xxla_          79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  120 (234)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEEc
Confidence            2347999986332     1  378889999999999988643

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.97  E-value=3.4e-05  Score=54.17  Aligned_cols=100  Identities=18%  Similarity=0.172  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-ceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFD-DAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ...++++|++||=.|  .|.|..++.+|+. +.+|++++.+++..+.+++   ++|.. .+ ..... +..+....  .+
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~g-da~~~~~~--~~   99 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEG-DAPEALCK--IP   99 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEES-CHHHHHTT--SC
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEEC-chhhcccc--cC
Confidence            457899999999999  4556666667664 5699999999998888774   35653 32 22112 33323211  23


Q ss_pred             CccEEEcCcch----hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVGA----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|.|+...+.    +.++.+.+.|+|+|+++...
T Consensus       100 ~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            79988765432    37788889999999998754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.94  E-value=3.7e-05  Score=56.81  Aligned_cols=82  Identities=20%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHhCCCc---eeeccChhhHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK-------VTLLKDKLGFDD---AFNYKEETDLKAALKR  103 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~-------~~~~~~~~g~~~---~~~~~~~~~~~~~~~~  103 (228)
                      .++|+.++||+||++++|.+.++.+...|+ +|+.+.++...       .+.++ ..|..-   ..|..+..+....+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            478899999999999999999988888898 67777765321       12233 455421   2355554344444444


Q ss_pred             HCCC-CccEEEcCcc
Q 027106          104 YFPD-GIDIYFDNVG  117 (228)
Q Consensus       104 ~~~~-~~d~vld~~g  117 (228)
                      .... ++|.++++.|
T Consensus        84 i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAA   98 (259)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             ccccccccccccccc
Confidence            4333 7899998877

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.4e-05  Score=58.90  Aligned_cols=48  Identities=17%  Similarity=0.080  Sum_probs=43.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++++.+.++++.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence            799999999999999999999999999999999998888777767765

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.93  E-value=1.8e-05  Score=59.41  Aligned_cols=107  Identities=11%  Similarity=0.112  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      |.....+.+|++||=.|  .|.|..+..+++..|++|++++.++...+.+++   ..|...-+..... ++.+ + .+.+
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~-d~~~-l-~~~~  133 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLE-I-PCED  133 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTS-C-SSCT
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccc-cccc-c-cccc
Confidence            43557899999999999  456777888888889999999999988777763   2344321111111 1110 0 1122


Q ss_pred             CCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEeeec
Q 027106          107 DGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       107 ~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +.||+|+..-.     .  ..+..+.++|+|||+++......
T Consensus       134 ~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~~  175 (282)
T d2o57a1         134 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK  175 (282)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             cccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEeec
Confidence            47999975321     1  37889999999999999876543

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=4.3e-05  Score=56.50  Aligned_cols=101  Identities=16%  Similarity=0.092  Sum_probs=71.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHh---C---CCceeeccChhhHHHHHHH
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKL---G---FDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g---~~~~~~~~~~~~~~~~~~~  103 (228)
                      ...+++||++||=.|  .|.|.++..+|+..|.  +|+.++.+++..+.+++.+   +   .+.+.....  +..+  ..
T Consensus        90 ~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~--~~  163 (264)
T d1i9ga_          90 HEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLAD--SE  163 (264)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGG--CC
T ss_pred             HHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--cccc--cc
Confidence            678999999999998  6778899999999875  9999999999998887422   1   122211111  1111  01


Q ss_pred             HCCCCccEEEcCcch--hHHHHHHHccccCcEEEEEe
Q 027106          104 YFPDGIDIYFDNVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       104 ~~~~~~d~vld~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.++.||.||--...  ..+..+.+.|+|||+++++.
T Consensus       164 ~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         164 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            122379987654444  48899999999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.3e-05  Score=57.42  Aligned_cols=103  Identities=17%  Similarity=0.212  Sum_probs=63.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEE---EEeCCHHHHHHH---HHHhCC---C---ceeeccChhhHHHHHHHHCCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVV---GSAGSKEKVTLL---KDKLGF---D---DAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~---~~~~~~~~~~~~---~~~~g~---~---~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      +.|||+||++|+|.+.++.+...|++|+   .+.++.+..+.+   .+++..   .   ..+|..+.++....+.+...+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            4578999999999999988888898644   444443332222   213322   1   124555553555555554456


Q ss_pred             CccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          108 GIDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       108 ~~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      .+|++++++|..           .+               +.++..|.  .+|++|.+++..+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            899999987621           11               33455563  3699999987654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.90  E-value=3.1e-06  Score=62.72  Aligned_cols=101  Identities=15%  Similarity=0.075  Sum_probs=66.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ++||+||++++|++.++.+...|++|++++++.++.+.++.   .+...++.+..+.+.+.+.+.+.. +++|++++++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECCc
Confidence            78999999999999999888999999999988777766652   122233333333323444443332 47999998765


Q ss_pred             h--h----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          118 A--E----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       118 ~--~----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                      .  .          .+               +.+++.|.  .+|++|.++...+
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            2  1          12               23344553  3699999987654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.89  E-value=1.1e-05  Score=59.09  Aligned_cols=103  Identities=14%  Similarity=0.139  Sum_probs=68.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHHh---CCCc---eeeccChhhHHHHHHHHC-
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCY-------VVGSAGSKEKVTLLKDKL---GFDD---AFNYKEETDLKAALKRYF-  105 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~-------V~~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~~-  105 (228)
                      +.|||+||++|+|.+.++.+...|++       |+.+++++++++.+.+++   |...   ..|..+.++..+.+.+.. 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999888888886       888999998887665443   3311   235555433333333322 


Q ss_pred             -CCCccEEEcCcchh-----------HH---------------HHHHHccc--cCcEEEEEeeecc
Q 027106          106 -PDGIDIYFDNVGAE-----------MQ---------------EAAIANMN--TYGRVAVCGVISE  142 (228)
Q Consensus       106 -~~~~d~vld~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  142 (228)
                       -+++|++++++|..           .+               +.+++.|+  .+|+++.+++..+
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             24799999988731           22               33456664  4699999887654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.89  E-value=5.6e-06  Score=61.10  Aligned_cols=78  Identities=13%  Similarity=0.228  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--HhCCC-c--eeeccChhhHH---HHHHHHCC-C
Q 027106           40 EKVFVSAASGSVGHLVGQYAK---LFGCYVVGSAGSKEKVTLLKD--KLGFD-D--AFNYKEETDLK---AALKRYFP-D  107 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~---~~g~~V~~~~~~~~~~~~~~~--~~g~~-~--~~~~~~~~~~~---~~~~~~~~-~  107 (228)
                      ++|||+||++|+|++.++.+.   ..|++|+++++++++.+.+++  +.+.. .  .+|..+.++..   +.++.... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            589999999999999886554   358899999999887665542  12221 1  23444442333   33333333 4


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|++++++|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999876

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=8.5e-06  Score=58.23  Aligned_cols=95  Identities=16%  Similarity=0.125  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .++|+|+||+|.+|..++..+...|.+|.+++++++++.... ..+.+.+ .|..+.+++.+.+     .+.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al-----~~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTV-----AGQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHH-----TTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHh-----cCCCEEEEEec
Confidence            478999999999999999988889999999999988754332 2333221 2344332222222     25899999887


Q ss_pred             hh-----------HHHHHHHccccC--cEEEEEee
Q 027106          118 AE-----------MQEAAIANMNTY--GRVAVCGV  139 (228)
Q Consensus       118 ~~-----------~~~~~~~~l~~~--G~~v~~g~  139 (228)
                      ..           ....+++.++..  .+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            41           223445555554  37777764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.83  E-value=3.9e-05  Score=57.14  Aligned_cols=81  Identities=15%  Similarity=0.152  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCce--eeccChhhHHHHHHHHC--CC
Q 027106           37 KKGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKE---KVTLLKDKLGFDDA--FNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~--~~  107 (228)
                      -+|+++||+||+|  |+|.+.++.+...|++|+++.++++   +.+.+.++.+...+  .+..+..+..+.+.+..  -+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            3699999999866  7999999999999999999998764   33333313332222  23333323333333222  24


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ++|+++++.|
T Consensus        83 ~id~lV~nag   92 (274)
T d2pd4a1          83 SLDFIVHSVA   92 (274)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCeEEeecc
Confidence            7999998876

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.80  E-value=4.8e-05  Score=55.45  Aligned_cols=92  Identities=17%  Similarity=0.131  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +.++.+||=.|  .|.|..+..+++ .|++|++++.++...+.++ +.+....+..+.. ++     ....+.||+|+..
T Consensus        40 ~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence            56788999998  557888888876 5899999999999999999 6666554443322 21     1223479998864


Q ss_pred             cc------h--hHHHHHHHccccCcEEEEE
Q 027106          116 VG------A--EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       116 ~g------~--~~~~~~~~~l~~~G~~v~~  137 (228)
                      ..      .  ..+..+.++|+|||.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            33      1  2677888999999988874

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=2.2e-05  Score=57.06  Aligned_cols=99  Identities=10%  Similarity=-0.050  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCCCCccEEE-
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFPDGIDIYF-  113 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl-  113 (228)
                      ..+|.+||-+|  .|.|..+..+++..+.+|++++.++...+.+++..... ..+..... +.......+..+.||.++ 
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36899999999  67788888888876679999999999999998433221 11111111 333333343445898874 


Q ss_pred             cCcch-----------hHHHHHHHccccCcEEEEE
Q 027106          114 DNVGA-----------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       114 d~~g~-----------~~~~~~~~~l~~~G~~v~~  137 (228)
                      |....           ..+..+.++|+|||+++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            54321           1556678999999999864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.76  E-value=0.0001  Score=51.67  Aligned_cols=100  Identities=16%  Similarity=0.036  Sum_probs=67.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-----------------eeccCh
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-----------------FNYKEE   94 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-----------------~~~~~~   94 (228)
                      ....+.+|.+||..|  .|.|..+..+|+ .|.+|++++.++...+.+++..+....                 +..+..
T Consensus        14 ~~l~~~~~~rvLd~G--CG~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPL--CGKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETT--TCCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEec--CcCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            345689999999999  567788888886 599999999999999999855543211                 000000


Q ss_pred             hhHHHHHHHHCCCCccEEEcCcc-----h----hHHHHHHHccccCcEEEEEee
Q 027106           95 TDLKAALKRYFPDGIDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        95 ~~~~~~~~~~~~~~~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                       +.....    ...+|+|++...     .    ..++.+.++|++||+++....
T Consensus        91 -~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 -ALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             -SSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             -cccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence             100010    015899887432     1    267888899999999877543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.76  E-value=3.8e-05  Score=56.96  Aligned_cols=82  Identities=16%  Similarity=0.265  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCc---eeeccChh---hHHHHHHHHCC
Q 027106           36 PKKGEKVFVSAAS--GSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDKLGFDD---AFNYKEET---DLKAALKRYFP  106 (228)
Q Consensus        36 ~~~g~~VlI~ga~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~~---~~~~~~~~---~~~~~~~~~~~  106 (228)
                      +-+|+++||+||+  .|+|.+.++-+...|++|+.+.++.++. +.+.++++...   ..|..+.+   +..+.+.+...
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4578999999954  4799999998899999999999877665 44443566422   23333331   23334443332


Q ss_pred             --CCccEEEcCcc
Q 027106          107 --DGIDIYFDNVG  117 (228)
Q Consensus       107 --~~~d~vld~~g  117 (228)
                        +.+|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              36899998876

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.70  E-value=1.1e-05  Score=58.60  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=68.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCce--eeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDA--FNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~--~~~~~~~~~~~~~~~~~~  106 (228)
                      +.++++++++||=.|  .|.|..+..+++ .|++|++++.+++..+.+++   +.+...+  +..+.. ++     .+..
T Consensus         9 ~~~~l~~~~rVLDiG--cG~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~~~   79 (231)
T d1vl5a_           9 QIAALKGNEEVLDVA--TGGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFTD   79 (231)
T ss_dssp             HHHTCCSCCEEEEET--CTTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSCT
T ss_pred             HhcCCCCcCEEEEec--ccCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----cccc
Confidence            668999999999999  446777777765 47899999999988777763   2344332  211111 11     1123


Q ss_pred             CCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +.||+|+....     .  ..+..+.++|+|||+++....
T Consensus        80 ~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          80 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            47999975432     2  378899999999999998654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.69  E-value=0.00014  Score=50.14  Aligned_cols=101  Identities=10%  Similarity=-0.013  Sum_probs=63.2

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ceeeccChhhHHHHHHHHCC
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-DAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ..|.+..-..+|++|+|.|+ ||.+.+++..+...+.+|+++.|+.++.+.+.+.++.. .+......        +...
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~--------~~~~   77 (171)
T d1p77a1           7 TDLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD--------SIPL   77 (171)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--------GCCC
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc--------cccc
Confidence            34544444558899999995 99999998877776679999999999988887566531 22221111        1112


Q ss_pred             CCccEEEcCcchhHHHH----HHHccccCcEEEEE
Q 027106          107 DGIDIYFDNVGAEMQEA----AIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vld~~g~~~~~~----~~~~l~~~G~~v~~  137 (228)
                      ..+|++++|++...-..    ....++++..++.+
T Consensus        78 ~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~  112 (171)
T d1p77a1          78 QTYDLVINATSAGLSGGTASVDAEILKLGSAFYDM  112 (171)
T ss_dssp             SCCSEEEECCCC-------CCCHHHHHHCSCEEES
T ss_pred             cccceeeecccccccccccchhhhhhcccceeeee
Confidence            36899999987432111    12334555655554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=6.9e-05  Score=55.39  Aligned_cols=80  Identities=21%  Similarity=0.245  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHH-HHHH--cCCEEEEEeCCHHHHHHHHHHhC---C-Cc----eeeccChhhHH---HHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQ-YAKL--FGCYVVGSAGSKEKVTLLKDKLG---F-DD----AFNYKEETDLK---AALKR  103 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~-~a~~--~g~~V~~~~~~~~~~~~~~~~~g---~-~~----~~~~~~~~~~~---~~~~~  103 (228)
                      .|+.++|+||++|+|.+.++ +|+.  .|++|+++++++++++.+.+++.   . .+    ..|..+.++..   +.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            57889999999999998775 4553  68999999999998877764432   1 12    23545442332   23333


Q ss_pred             HC--CC-CccEEEcCcc
Q 027106          104 YF--PD-GIDIYFDNVG  117 (228)
Q Consensus       104 ~~--~~-~~d~vld~~g  117 (228)
                      ..  .+ ..|++++++|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            22  22 6788888654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=0.00033  Score=47.45  Aligned_cols=101  Identities=17%  Similarity=0.185  Sum_probs=73.1

Q ss_pred             HHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHH
Q 027106           25 TAYAGLFEIGK-PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKR  103 (228)
Q Consensus        25 ta~~~l~~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  103 (228)
                      +.+.++.+..+ .-.|++|.|.| .|-+|.-.++.++.+|++|++++..+.+.-.+. .-|.. +.      .+.+.+  
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~--   77 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEAC--   77 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHT--
T ss_pred             hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhh--
Confidence            34445544433 46899999999 699999999999999999999999987754444 34432 11      111122  


Q ss_pred             HCCCCccEEEcCcchh--HHHHHHHccccCcEEEEEee
Q 027106          104 YFPDGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       104 ~~~~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~  139 (228)
                         ...|+++-++|..  .-.+-++.|+++..+..+|.
T Consensus        78 ---~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          78 ---QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ---hhccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence               1369999999973  55677899999988888874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.62  E-value=0.0004  Score=47.74  Aligned_cols=97  Identities=12%  Similarity=0.040  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ++++|+|.|| |.+|..+++.+...|.+|++++++.++.+.+.++++...+. .... .......... ...|.++.+..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~~~~i~~~~   76 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEV-AKHDLVISLIP   76 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHH-TTSSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhh-hccceeEeecc
Confidence            3689999996 99999999998888999999999999999887455432222 1111 1111111111 13677777776


Q ss_pred             hh-HHHHHHHccccCcEEEEEe
Q 027106          118 AE-MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       118 ~~-~~~~~~~~l~~~G~~v~~g  138 (228)
                      .. .......++..+..++...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          77 YTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             GGGHHHHHHHHHHHTCEEECSS
T ss_pred             chhhhHHHHHHHhhccceeecc
Confidence            53 4444455566666666654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00038  Score=48.38  Aligned_cols=105  Identities=16%  Similarity=0.151  Sum_probs=63.1

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHhCC-----CceeeccChhhHH
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK---DKLGF-----DDAFNYKEETDLK   98 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~---~~~g~-----~~~~~~~~~~~~~   98 (228)
                      .+|.+.+---++.+|+|.|+ ||.|.+++..+...|+ +++++.+++++.+.+.   ++++.     ..+.+..+...+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            34544333347789999995 9999999988888898 8889998766544332   13321     1123333322333


Q ss_pred             HHHHHHCCCCccEEEcCcchhHH-------HHHHHccccCcEEEEEe
Q 027106           99 AALKRYFPDGIDIYFDNVGAEMQ-------EAAIANMNTYGRVAVCG  138 (228)
Q Consensus        99 ~~~~~~~~~~~d~vld~~g~~~~-------~~~~~~l~~~G~~v~~g  138 (228)
                      +.+.     .+|+|++|++-...       ..-+..++++..++.+-
T Consensus        86 ~~~~-----~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          86 EALA-----SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HHHH-----TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             hhhc-----ccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            3322     48999999863211       11134566777777664

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.58  E-value=0.00058  Score=46.53  Aligned_cols=86  Identities=16%  Similarity=0.149  Sum_probs=60.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-  119 (228)
                      +|.|+| .|-+|...++.++..|.+|+++++++++.+.++ +.|.........  +   .+     ...|+||-++... 
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~--~---~~-----~~~DiIilavp~~~   69 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL--S---LL-----QTAKIIFLCTPIQL   69 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG--G---GG-----TTCSEEEECSCHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec--c---cc-----cccccccccCcHhh
Confidence            688999 599999988888899999999999999999888 777533222111  1   11     2479999888754 


Q ss_pred             ---HHHHHHHccccCcEEEEEe
Q 027106          120 ---MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       120 ---~~~~~~~~l~~~G~~v~~g  138 (228)
                         .++.....+.++-.++.++
T Consensus        70 ~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          70 ILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhhhhhcccccceeecc
Confidence               4444444555566665554

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=97.57  E-value=0.0004  Score=50.01  Aligned_cols=105  Identities=16%  Similarity=0.093  Sum_probs=73.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |....+....++||-.|  +++|..++.+|+.+.  .+|+.++.+++..+.+++   +.|..+-+..... +..+.+.++
T Consensus        51 L~~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l  127 (227)
T d1susa1          51 LSMLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEM  127 (227)
T ss_dssp             HHHHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHH
T ss_pred             HHHHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHH
Confidence            33445566778999999  889999999999874  599999999988877763   3466443333222 333333333


Q ss_pred             -----CCCCccEEE-cCcch---hHHHHHHHccccCcEEEEE
Q 027106          105 -----FPDGIDIYF-DNVGA---EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       105 -----~~~~~d~vl-d~~g~---~~~~~~~~~l~~~G~~v~~  137 (228)
                           ..+.||.|| |+--.   ..++.++++|++||.++.=
T Consensus       128 ~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         128 IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             HHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             HhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence                 234799986 54332   4888999999999998884

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.57  E-value=0.00078  Score=44.07  Aligned_cols=90  Identities=13%  Similarity=0.103  Sum_probs=61.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|+|.|+ |.+|..+++.+...|.+|++++.++++.+.+.++++...+. |..+. +   .+.+..-...|.++-+++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~-~---~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI-K---TLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH-H---HHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccch-h---hhhhcChhhhhhhcccCCcH
Confidence            6899996 99999999999999999999999999999887566653322 23332 2   33333223689999888764


Q ss_pred             ----HHHHHHHccccCcEEEE
Q 027106          120 ----MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       120 ----~~~~~~~~l~~~G~~v~  136 (228)
                          ......+.+.+. +++.
T Consensus        77 ~~N~~~~~~~k~~~~~-~iI~   96 (132)
T d1lssa_          77 EVNLMSSLLAKSYGIN-KTIA   96 (132)
T ss_dssp             HHHHHHHHHHHHTTCC-CEEE
T ss_pred             HHHHHHHHHHHHcCCc-eEEE
Confidence                223333455554 4443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.0001  Score=54.29  Aligned_cols=81  Identities=14%  Similarity=0.223  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCcee--eccChhhHHHHHHHHCC--C
Q 027106           37 KKGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAF--NYKEETDLKAALKRYFP--D  107 (228)
Q Consensus        37 ~~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~--~~~~~~~~~~~~~~~~~--~  107 (228)
                      -+|+++||+||++  |+|.+.+..+...|++|+.+.++++..+.+.+   ..+....+  +..+..+....+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4789999999988  78899999989999999999987664444432   33433322  22222133333333322  3


Q ss_pred             CccEEEcCcc
Q 027106          108 GIDIYFDNVG  117 (228)
Q Consensus       108 ~~d~vld~~g  117 (228)
                      ..|+++++++
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            7899988754

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.50  E-value=9.8e-05  Score=53.38  Aligned_cols=103  Identities=13%  Similarity=0.111  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-Cceeec-cChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGF-DDAFNY-KEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~-~~~~~~-~~~~~~~~~~~~~~~~  107 (228)
                      ....++||++||=.|  .|.|..+..+|+..|.  +|++++.++...+.+++.... ..+... .+. ....... ....
T Consensus        67 ~~l~i~pG~~VLDlG--aGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~-~~~~~~~-~~~~  142 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLG--IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA-TKPEEYR-ALVP  142 (227)
T ss_dssp             CCCCCCTTCEEEEET--TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT-TCGGGGT-TTCC
T ss_pred             cccccCCCCEEEEec--cCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC-CCccccc-cccc
Confidence            345789999999999  5668888899998874  999999999988888744322 111111 111 1001111 1113


Q ss_pred             CccEEEcCcch-----hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVGA-----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g~-----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|+++.....     ..+..+.+.|+++|+++++-
T Consensus       143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            68888754432     26788889999999998753

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.49  E-value=0.00081  Score=46.42  Aligned_cols=90  Identities=18%  Similarity=0.159  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-------eeccC--hhhHHHHHHHHCCCCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-------FNYKE--ETDLKAALKRYFPDGID  110 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-------~~~~~--~~~~~~~~~~~~~~~~d  110 (228)
                      ++|.|+|+ |.+|.+.+..+...|.+|.++++++++.+.++ +.+....       .....  ..+..+.+.     ..|
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD   74 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD   74 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence            68999996 99999999999999999999999999998888 5552110       00000  002233332     489


Q ss_pred             EEEcCcchhHHHH----HHHccccCcEEEE
Q 027106          111 IYFDNVGAEMQEA----AIANMNTYGRVAV  136 (228)
Q Consensus       111 ~vld~~g~~~~~~----~~~~l~~~G~~v~  136 (228)
                      ++|-++.......    +...+.++-.++.
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            9999988653444    4455555555543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.46  E-value=0.00092  Score=44.89  Aligned_cols=83  Identities=23%  Similarity=0.262  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQ-YAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~-~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|.++|+ |.+|.+.++ +.+.-+.+|+++++++++.+.+.+++|... .+..+  .    +     ...|+||=|+-..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccc--c----c-----cccceEEEecCHH
Confidence            6889995 999998877 455444799999999999988885677532 22111  1    0     1468999888776


Q ss_pred             HHHHHHHccccCcEEEE
Q 027106          120 MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       120 ~~~~~~~~l~~~G~~v~  136 (228)
                      .+...++-+++.++++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            77777777777666554

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00035  Score=50.44  Aligned_cols=104  Identities=15%  Similarity=0.109  Sum_probs=68.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-------------------eecc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-------------------FNYK   92 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-------------------~~~~   92 (228)
                      ....+.+|.+||..|  .|.|..+..+|+ .|++|++++.|+...+.++++.+....                   ++.-
T Consensus        39 ~~l~~~~~~rvLd~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678999999999  455888888876 699999999999999888855443210                   0000


Q ss_pred             ChhhHHHHHHHHCCCCccEEEcCcc-----h----hHHHHHHHccccCcEEEEEeee
Q 027106           93 EETDLKAALKRYFPDGIDIYFDNVG-----A----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus        93 ~~~~~~~~~~~~~~~~~d~vld~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .. ++. .+.....+.+|+|+++..     .    ..+..+.++|+|+|++++....
T Consensus       116 ~~-d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         116 CC-SIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             ES-CGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             Ec-chh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence            00 110 011111237899998643     1    2667889999999998876643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.44  E-value=0.00077  Score=52.69  Aligned_cols=106  Identities=18%  Similarity=0.202  Sum_probs=70.5

Q ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----------CC--Cc-eee
Q 027106           25 TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL----------GF--DD-AFN   90 (228)
Q Consensus        25 ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~----------g~--~~-~~~   90 (228)
                      .....+ +..++++|+++|=.|  .|+|..+.++|+..|+ +|++++.++...+.+++..          |.  .. .+.
T Consensus       204 ~i~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~  280 (406)
T d1u2za_         204 FLSDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS  280 (406)
T ss_dssp             HHHHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred             HHHHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceee
Confidence            344445 678999999999998  7899999999999997 8999999998877775311          11  11 011


Q ss_pred             ----ccChhhHHHHHHHHCCCCccEEEcC-c--ch---hHHHHHHHccccCcEEEEEe
Q 027106           91 ----YKEETDLKAALKRYFPDGIDIYFDN-V--GA---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        91 ----~~~~~~~~~~~~~~~~~~~d~vld~-~--g~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                          ..+. +......    ..+|+++-. .  +.   ..+.++++.|+|||++|...
T Consensus       281 ~~~~f~~~-~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         281 LKKSFVDN-NRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             ESSCSTTC-HHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eeechhhc-ccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence                1111 1111111    136777632 2  22   26778889999999999864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.40  E-value=0.00039  Score=52.07  Aligned_cols=38  Identities=13%  Similarity=0.239  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           38 KGEKVFVSAASG--SVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        38 ~g~~VlI~ga~g--~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            789999999876  89999999999999999999876543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.36  E-value=0.00051  Score=50.48  Aligned_cols=36  Identities=17%  Similarity=0.191  Sum_probs=31.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      .+.||+||++|+|.+.++.+...|++|++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            367999999999999999999999999999987543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.36  E-value=0.00028  Score=50.74  Aligned_cols=71  Identities=21%  Similarity=0.160  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+|||+||+|.+|..+++.+...|.  .|+...+++++.+.+.  -+.+. ..|..+...+.+.+     .++|.|+.++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF-----QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecccccccccc-----ccceeeEEEE
Confidence            5899999999999999998888885  5777788887655432  12222 12333332222222     2589998876


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.33  E-value=0.00026  Score=50.48  Aligned_cols=101  Identities=13%  Similarity=0.135  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-Cceee-ccChhhHHHHHHHHCCCCcc
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF-DDAFN-YKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..++||++||=.|+  |.|..+..+++..+. +|++++.++...+.+++.... ..+.. ..+..+. .. .......+|
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~-~~-~~~~~~~vd  127 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-WK-YSGIVEKVD  127 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-GG-TTTTCCCEE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCc-cc-cccccceEE
Confidence            57899999999994  455677777887754 999999999988877633211 11111 1111010 00 000112578


Q ss_pred             EEEcCcch-----hHHHHHHHccccCcEEEEEe
Q 027106          111 IYFDNVGA-----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~g~-----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +++.....     ..+..+.+.|+++|+++.+-
T Consensus       128 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         128 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            88764431     26777889999999998864

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.0014  Score=49.79  Aligned_cols=101  Identities=18%  Similarity=0.232  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HhCCC--c--ee--ecc
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD----------KLGFD--D--AF--NYK   92 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----------~~g~~--~--~~--~~~   92 (228)
                      +.+..+++++++||-.|  .|.|..+.++|+..++ ++++++.++...+.+++          .+|..  .  ++  |..
T Consensus       143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            33678999999999998  7889999999999998 89999999987776652          12221  1  12  122


Q ss_pred             ChhhHHHHHHHHCCCCccEEEcC-c--ch---hHHHHHHHccccCcEEEEEe
Q 027106           93 EETDLKAALKRYFPDGIDIYFDN-V--GA---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus        93 ~~~~~~~~~~~~~~~~~d~vld~-~--g~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +. .+.+.+.+     +|+|+-. .  +.   ..+.++++.|+|||++|+.-
T Consensus       221 ~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22 33333322     5777632 2  12   26777889999999999864

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00069  Score=48.48  Aligned_cols=106  Identities=12%  Similarity=0.065  Sum_probs=72.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |....+....++||=.|  ++.|..++.+|+.+  +.+|+.++.+++..+.+++   +.|....+..... +..+.+.+.
T Consensus        51 L~~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~  127 (219)
T d2avda1          51 LANLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDEL  127 (219)
T ss_dssp             HHHHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHH
T ss_pred             HHHHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhh
Confidence            43456667788999999  78899999999886  4599999999888777663   3465443333222 333333222


Q ss_pred             ----CCCCccEEEcCcc-h---hHHHHHHHccccCcEEEEEe
Q 027106          105 ----FPDGIDIYFDNVG-A---EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ----~~~~~d~vld~~g-~---~~~~~~~~~l~~~G~~v~~g  138 (228)
                          ..+.||.||--.. .   ..++.++++|++||.++.-.
T Consensus       128 ~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         128 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence                2347999874333 2   37889999999999998843

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.30  E-value=0.0012  Score=41.93  Aligned_cols=90  Identities=9%  Similarity=0.053  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCceee--ccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK--EKVTLLKDKLGFDDAFN--YKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .|.+|||.|+ |.+|..-++.+...|++|++++...  +...++. + +.-....  +.+. ++         .++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~-~~i~~~~~~~~~~-dl---------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-E-GMLTLVEGPFDET-LL---------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-T-TSCEEEESSCCGG-GG---------TTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-c-CCceeeccCCCHH-Hh---------CCCcEEe
Confidence            5789999996 9999999999999999998887533  2222222 2 2112121  1111 11         2589999


Q ss_pred             cCcchh-HHHHHHHccccCcEEEEEeee
Q 027106          114 DNVGAE-MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       114 d~~g~~-~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .+++.+ .-....+..++.|.+|.+...
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~D~  105 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVVDA  105 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence            888875 445677788889999987643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.30  E-value=0.0022  Score=46.47  Aligned_cols=96  Identities=15%  Similarity=0.139  Sum_probs=65.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ceeeccChhhHHHHHHHHC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFD-DAFNYKEETDLKAALKRYF  105 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~  105 (228)
                      +.......++++||=.|+  |.|..+..+++ .|++|++++.+++..+.+++.+   +.. .+...    +    +.++.
T Consensus        33 ~~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~----d----~~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQG----D----VLEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEES----C----GGGCC
T ss_pred             HHHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheeh----h----hhhcc
Confidence            334456778889999993  44777777776 6889999999999988887432   221 12221    1    12222


Q ss_pred             -CCCccEEEcCcch----------hHHHHHHHccccCcEEEE
Q 027106          106 -PDGIDIYFDNVGA----------EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       106 -~~~~d~vld~~g~----------~~~~~~~~~l~~~G~~v~  136 (228)
                       ++.||+|+...+.          ..++.+.++|+|||.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             2379998865321          267788899999999876

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.29  E-value=0.00033  Score=52.16  Aligned_cols=40  Identities=18%  Similarity=0.136  Sum_probs=32.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-SKEKVTLLK   80 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~   80 (228)
                      .+||+||++|+|.+.++.+...|++|+++++ +++..+.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            4689999999999999999999999998765 445444443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.24  E-value=0.00077  Score=48.04  Aligned_cols=94  Identities=16%  Similarity=0.087  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCc-eeeccChhhHHHHHHHHCCCCccE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDD-AFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ++++++||-.|  .|.|..+..+++ .|.+|++++.+++..+.+++.+   +... .+..+.. ++     ....+.+|+
T Consensus        35 l~~~~~ILDiG--cG~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD~  105 (226)
T d1ve3a1          35 MKKRGKVLDLA--CGVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFDY  105 (226)
T ss_dssp             CCSCCEEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEEE
T ss_pred             cCCCCEEEEEC--CCcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCceE
Confidence            57889999999  455777888876 5889999999999888887432   3211 1111110 10     111237999


Q ss_pred             EEcCcc-----h----hHHHHHHHccccCcEEEEEe
Q 027106          112 YFDNVG-----A----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       112 vld~~g-----~----~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+....     .    ..+..+.++|+|||+++..-
T Consensus       106 I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~~  141 (226)
T d1ve3a1         106 VIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF  141 (226)
T ss_dssp             EEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEEE
Confidence            875322     1    16788899999999987643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.21  E-value=0.00048  Score=53.67  Aligned_cols=32  Identities=19%  Similarity=0.126  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA   70 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~   70 (228)
                      |.+|||+||+|-+|..+++.+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            78999999999999999999999999999997

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.21  E-value=0.0023  Score=43.61  Aligned_cols=89  Identities=13%  Similarity=0.061  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +|+|+| .|-+|...+..++..|.  +|++++++++..+.++ +.|.......... .       ......|+|+-|+..
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~-~-------~~~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA-K-------VEDFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGG-G-------GGGTCCSEEEECSCH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhh-h-------hhccccccccccCCc
Confidence            699999 59999999988888874  8999999999999999 7776332222211 1       001247899888875


Q ss_pred             h----HHHHHHHccccCcEEEEEee
Q 027106          119 E----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       119 ~----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .    .+....+.+.++..++.++.
T Consensus        73 ~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          73 RTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhhhhhhcccccccccccccc
Confidence            4    44455566777777777664

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.19  E-value=0.00031  Score=52.63  Aligned_cols=99  Identities=12%  Similarity=0.009  Sum_probs=63.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCce---eeccChhhHHHHHHHHCCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDA---FNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~~~~~~~~~~~  107 (228)
                      .+.+.+.+||-.|  .|.|..++.+++. |++|++++.+++.++.+++..   +....   .+..+. ++...-.....+
T Consensus        52 l~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  127 (292)
T d1xvaa_          52 LRQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA-NWLTLDKDVPAG  127 (292)
T ss_dssp             HHHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC-CGGGHHHHSCCT
T ss_pred             hhhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec-cccccccccCCC
Confidence            4446788999998  5678888888875 899999999999888876332   21110   011111 111111222233


Q ss_pred             -CccEEEcCcc---h------------hHHHHHHHccccCcEEEE
Q 027106          108 -GIDIYFDNVG---A------------EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       108 -~~d~vld~~g---~------------~~~~~~~~~l~~~G~~v~  136 (228)
                       ++|.|+....   .            ..+..+.+.|+|||.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence             7999875321   1            268889999999999887

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.19  E-value=0.00046  Score=49.87  Aligned_cols=100  Identities=14%  Similarity=0.093  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCc-e--eeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDD-A--FNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+++|++||=.|+  |.|..+..+|+... ..|++++.++...+.+++...... +  +..... ..    ......
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~----~~~~~~  140 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP----QEYANI  140 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG----GGGTTT
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC----cccccc
Confidence            4467899999999994  55677777887643 499999999998888873322211 1  111110 11    111112


Q ss_pred             --CccEEEcCcch-----hHHHHHHHccccCcEEEEEe
Q 027106          108 --GIDIYFDNVGA-----EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 --~~d~vld~~g~-----~~~~~~~~~l~~~G~~v~~g  138 (228)
                        .+|+++.....     ..+..+.+.|+|+|+++++-
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence              46666665532     25778889999999988764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.18  E-value=0.0023  Score=42.82  Aligned_cols=86  Identities=12%  Similarity=0.135  Sum_probs=64.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM  120 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  120 (228)
                      +|.+.| +|-+|.+.+.-....|.+++++.++.++.+.+.+++|....-      +..+.+.     ..|+||=|+....
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            578899 599999888766667889999999999888876578865432      2222232     3799999888778


Q ss_pred             HHHHHHccccCcEEEEEe
Q 027106          121 QEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       121 ~~~~~~~l~~~G~~v~~g  138 (228)
                      +...++.++++-.++.+.
T Consensus        70 ~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          70 FETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             HHHHHTTSCCCSCEEECC
T ss_pred             HHHHhhhcccceeEeccc
Confidence            888888888877776543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.17  E-value=0.001  Score=50.54  Aligned_cols=102  Identities=16%  Similarity=0.189  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHH--CCCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRY--FPDG  108 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~--~~~~  108 (228)
                      .+++|++||=.+  ++.|..++.+|+. |+ +|+.++.++...+.+++   ..|....+..... +..+.+...  .++.
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            368899998887  4555555555554 66 89999999998888764   3455321222112 333333322  2238


Q ss_pred             ccEEEcCcc---h-------------hHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVG---A-------------EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g---~-------------~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ||+|+-..+   .             ..+..++++|+|||.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            999874222   0             1566778899999999998643

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.15  E-value=0.00031  Score=49.35  Aligned_cols=102  Identities=16%  Similarity=0.093  Sum_probs=65.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeeccChhhHHHHHHHH
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-AFNYKEETDLKAALKRY  104 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~  104 (228)
                      .|.+...+.++++||-.|  .|.|..++.+++ .+.+|++++.++...+.+++.   .+... .+..... ++.   ...
T Consensus        43 lLi~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~---~~~  115 (194)
T d1dusa_          43 ILVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLY---ENV  115 (194)
T ss_dssp             HHHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STT---TTC
T ss_pred             HHHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chh---hhh
Confidence            344667889999999998  566666666665 467999999999988888742   33321 1111111 111   111


Q ss_pred             CCCCccEEEcCc----chh----HHHHHHHccccCcEEEEE
Q 027106          105 FPDGIDIYFDNV----GAE----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       105 ~~~~~d~vld~~----g~~----~~~~~~~~l~~~G~~v~~  137 (228)
                      .++.||+|+...    +.+    .+..+.+.|+++|+++.+
T Consensus       116 ~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            234799998632    222    577788999999998764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.15  E-value=0.00057  Score=52.29  Aligned_cols=47  Identities=30%  Similarity=0.288  Sum_probs=40.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      .-+.+|++|||+||+|-+|..+++.+...|.+|+++.++..+.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            34678999999999999999999888888999999999887766554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.11  E-value=0.0027  Score=48.21  Aligned_cols=38  Identities=5%  Similarity=-0.012  Sum_probs=31.3

Q ss_pred             CCEEEEEc--CCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 027106           39 GEKVFVSA--ASGSVGHLVGQYAKLFGCYVVGSAGSKEKV   76 (228)
Q Consensus        39 g~~VlI~g--a~g~~G~~a~~~a~~~g~~V~~~~~~~~~~   76 (228)
                      ++..||+|  ++.|+|.+.++.+...|++|+++.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            56789999  446999999999999999999988765543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.03  E-value=0.0092  Score=39.62  Aligned_cols=95  Identities=18%  Similarity=0.104  Sum_probs=58.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeC--CHHHHHHHHHHhCCCceeeccChhhHHHHHHH------------
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAG--SKEKVTLLKDKLGFDDAFNYKEETDLKAALKR------------  103 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------  103 (228)
                      ++|.|.|+||++|..+.++.+..  ..+|++.+.  +-+.+.....+|.+..++..++. .. +.+..            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~-~~-~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS-LY-NDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGG-GH-HHHHHHTTTCSSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHH-HH-HHHHHHhhhcccccccC
Confidence            78999999999999999999876  347776553  33444333327887766544332 21 11111            


Q ss_pred             ------HCCCCccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106          104 ------YFPDGIDIYFDNVGA-EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       104 ------~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~  136 (228)
                            .....+|+++.+..+ ..+.-.+.+++.+-++.+
T Consensus        81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             ccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                  111246777777544 566666777766554443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.01  E-value=0.00021  Score=54.92  Aligned_cols=77  Identities=18%  Similarity=0.350  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCc-eeeccChhhHHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG----FDD-AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +|++|||+||+|-+|..+++.+...|.+|++++++..+...+.+...    ... ..|..+...+.+.+...   .+|+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~---~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc---hhhhh
Confidence            67999999999999999999999999999999986543222221221    111 12333331223333221   57888


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.+++
T Consensus        84 ~~~aa   88 (356)
T d1rkxa_          84 FHMAA   88 (356)
T ss_dssp             EECCS
T ss_pred             hhhhc
Confidence            88776

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.00  E-value=0.0046  Score=43.14  Aligned_cols=95  Identities=14%  Similarity=0.091  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCce-eeccChhhHHHHHHHH-CCCCc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDA-FNYKEETDLKAALKRY-FPDGI  109 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~-~~~~~  109 (228)
                      .+++| +||-.|  .|.|..+..+++ .|.+|++++.+++.++.+++   +.|.+.+ +...+.       .+. .++.|
T Consensus        28 ~~~~g-rvLDiG--cG~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~-------~~~~~~~~f   96 (198)
T d2i6ga1          28 VVAPG-RTLDLG--CGNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL-------NTLTFDGEY   96 (198)
T ss_dssp             TSCSC-EEEEET--CTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT-------TTCCCCCCE
T ss_pred             cCCCC-cEEEEC--CCCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheec-------ccccccccc
Confidence            34555 899999  458888887776 58999999999988887652   2344332 111111       111 12379


Q ss_pred             cEEEcCc--c---h----hHHHHHHHccccCcEEEEEeee
Q 027106          110 DIYFDNV--G---A----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       110 d~vld~~--g---~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+|+...  .   .    ..+..+.++|+++|.++.....
T Consensus        97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             EEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             cEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            9998532  1   1    2777888899999999887543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=96.99  E-value=0.00039  Score=49.95  Aligned_cols=97  Identities=10%  Similarity=0.068  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKL---FGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ++++.+||-.|  .|.|..+..+++.   .+++|++++.+++.++.+++..   +....+..... +.    .......+
T Consensus        37 ~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d~----~~~~~~~~  109 (225)
T d1im8a_          37 VTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-DI----RHVEIKNA  109 (225)
T ss_dssp             CCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-CT----TTCCCCSE
T ss_pred             cCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-hh----hccccccc
Confidence            68999999999  5667777777775   4779999999999999988443   22211111111 11    12222356


Q ss_pred             cEEEcCcc-------h--hHHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNVG-------A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~g-------~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+++.+..       .  ..++.+.+.|+|||.++....
T Consensus       110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            77654322       1  378899999999999998653

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.98  E-value=0.0017  Score=47.65  Aligned_cols=99  Identities=16%  Similarity=0.090  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCc-eeeccChhhHHHHHHHHCCC-Cc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDD-AFNYKEETDLKAALKRYFPD-GI  109 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~~~~~~~~-~~  109 (228)
                      .+++|++||-.+  .|+|..++.+|+.-+++|++++.++...+.+++   ..|.+. +.....  |.    .++.+. .+
T Consensus       104 ~~~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~--D~----~~~~~~~~~  175 (260)
T d2frna1         104 VAKPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM--DN----RDFPGENIA  175 (260)
T ss_dssp             HCCTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS--CT----TTCCCCSCE
T ss_pred             hcCCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc--ch----HHhccCCCC
Confidence            468999999988  456666777777655699999999998888864   235433 211111  21    122233 68


Q ss_pred             cEEE-cCcc--hhHHHHHHHccccCcEEEEEeeec
Q 027106          110 DIYF-DNVG--AEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       110 d~vl-d~~g--~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |.|+ +...  ...+..+++.+++||.+.......
T Consensus       176 D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~~~  210 (260)
T d2frna1         176 DRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVP  210 (260)
T ss_dssp             EEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred             CEEEECCCCchHHHHHHHHhhcCCCCEEEEEeccc
Confidence            9655 4332  358889999999999887665443

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.0015  Score=48.14  Aligned_cols=96  Identities=13%  Similarity=0.031  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      ..++.+||=.|  .|.|..+..+++.. +.++++++.++...+.+++...-...+..+.. ++     .+..+.||+|+.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            46788999998  56677777777765 56999999999999988833322222211111 10     112237999997


Q ss_pred             CcchhHHHHHHHccccCcEEEEEee
Q 027106          115 NVGAEMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       115 ~~g~~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ......++++.+.|+|||.++...-
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            6655678899999999999998753

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.97  E-value=0.0012  Score=49.89  Aligned_cols=73  Identities=18%  Similarity=0.307  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHhCCCce--eeccChhhHHHHHHHHCCCCccEEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAG-----SKEKVTLLKDKLGFDDA--FNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~-----~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +|||+||+|-+|..+++.+...|.+|+++++     ..++.+.+. ..+--.+  .|..+..++.+.+...   ++|+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            7999999999999999988888999999863     222333343 3322222  2333332334333322   689999


Q ss_pred             cCcc
Q 027106          114 DNVG  117 (228)
Q Consensus       114 d~~g  117 (228)
                      .+++
T Consensus        78 h~aa   81 (338)
T d1orra_          78 HLAG   81 (338)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            9875

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.94  E-value=0.00078  Score=46.84  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=37.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~   83 (228)
                      +|.|+||+|++|.+.++.+...|++|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            6888877899999999999999999999999999887775444

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=96.93  E-value=0.003  Score=46.09  Aligned_cols=101  Identities=7%  Similarity=-0.037  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHC--CCCc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYF--PDGI  109 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~  109 (228)
                      ......++.+||=.|  .|.|..+..++.....+|++++.+++-.+.+++.+.....++.... ++    .++.  ++.|
T Consensus        87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d~----~~~~~~~~~f  159 (254)
T d1xtpa_          87 ASLPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-SM----ETATLPPNTY  159 (254)
T ss_dssp             HTSTTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-CG----GGCCCCSSCE
T ss_pred             hhCCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-cc----cccccCCCcc
Confidence            334456778999999  6778888888887777999999999999999855543333322211 11    1222  2379


Q ss_pred             cEEEcCc--c---h----hHHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNV--G---A----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~--g---~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+|+...  .   .    ..+..+.+.|+++|.++....
T Consensus       160 D~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            9997532  2   1    257788899999999988654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.86  E-value=0.0018  Score=45.36  Aligned_cols=86  Identities=20%  Similarity=0.211  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|..++++++.+|++|++.+........   ..+. .   ..   ++.+.+.+     .|+|+.+..
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~-~---~~---~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGY-Y---VD---SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTC-B---CS---CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc---ccee-e---ec---cccccccc-----cccccccCC
Confidence            478999999 5999999999999999999999865443221   1121 1   11   33334443     688887665


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-.+.++.|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence            2 1     33667899999999999874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.85  E-value=0.0024  Score=44.86  Aligned_cols=85  Identities=18%  Similarity=0.238  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|.| .|.+|..+++++...|++|++++.+.++..... .+|.+. +..+   +       +.....|+++-|+
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~-~~~~---~-------~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTA-VALE---D-------VLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CCGG---G-------GGGCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccc-cCcc---c-------cccccceeeeccc
Confidence            4789999999 599999999999999999999999999888887 777643 2222   1       1122689998776


Q ss_pred             ch-hHHHHHHHccccCcEEEE
Q 027106          117 GA-EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       117 g~-~~~~~~~~~l~~~G~~v~  136 (228)
                      .+ ..-....+.++  .+++.
T Consensus        92 ~~~~I~~~~a~~i~--ak~i~  110 (201)
T d1c1da1          92 MGGVITTEVARTLD--CSVVA  110 (201)
T ss_dssp             CSCCBCHHHHHHCC--CSEEC
T ss_pred             ccccccHHHHhhhh--hheee
Confidence            54 33333444443  45554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.0023  Score=41.72  Aligned_cols=91  Identities=15%  Similarity=0.086  Sum_probs=59.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCcee-eccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAF-NYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +++|.|. |.+|..+++.+...|.+|++++.++++.+.++ ..|...++ |..+. +...   +..-...|.++-+++.+
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~l~---~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NELL---SLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-THHH---HHTGGGCSEEEECCCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hhhh---ccCCccccEEEEEcCch
Confidence            5788885 99999999999999999999999999999888 66653332 33333 3322   22112578887777642


Q ss_pred             ----HHHHHHHccccCcEEEEE
Q 027106          120 ----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       120 ----~~~~~~~~l~~~G~~v~~  137 (228)
                          .+-.....+.+..+++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          76 IQASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHhHHHHHHHHHHcCCCcEEee
Confidence                222233334445566553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.82  E-value=0.0021  Score=44.61  Aligned_cols=88  Identities=24%  Similarity=0.263  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.++.|.| .|.+|...+++++.+|++|++.++...+.. .. ..+...    .   ++.+.+.+     .|+|.-+.
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~-~~-~~~~~~----~---~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPAR-AA-QLGIEL----L---SLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHH-HH-HHTCEE----C---CHHHHHHH-----CSEEEECC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhH-Hh-hcCcee----c---cHHHHHhh-----CCEEEEcC
Confidence            3578999999 499999999999999999999997654432 22 333321    1   33334443     68887765


Q ss_pred             ch-h-----HHHHHHHccccCcEEEEEee
Q 027106          117 GA-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +. +     .-...++.|+++..+|.++.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            52 2     34577899999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.79  E-value=0.00064  Score=49.16  Aligned_cols=37  Identities=19%  Similarity=0.162  Sum_probs=32.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      .+++||+||++|+|.+.++.+...|++|++++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            3688999999999999999999999999999987654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00021  Score=51.66  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      ++.+|||+||+|-+|..+++.+...|.  +|++++|++.+...-  ......  +.|..+.++    +.+.. .++|+++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~--~~~~i~~~~~D~~~~~~----~~~~~-~~~d~vi   85 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE--AYKNVNQEVVDFEKLDD----YASAF-QGHDVGF   85 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG--GGGGCEEEECCGGGGGG----GGGGG-SSCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc--ccceeeeeeeccccccc----ccccc-ccccccc
Confidence            457999999999999999988887785  899999865432211  111111  122222211    22211 2689999


Q ss_pred             cCcch
Q 027106          114 DNVGA  118 (228)
Q Consensus       114 d~~g~  118 (228)
                      .|+|.
T Consensus        86 ~~~~~   90 (232)
T d2bkaa1          86 CCLGT   90 (232)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.0024  Score=48.50  Aligned_cols=73  Identities=19%  Similarity=0.236  Sum_probs=47.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHhC---CCce-eeccChhhHHHHHHHHCCCCccEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAG----SKEKVTLLKDKLG---FDDA-FNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~----~~~~~~~~~~~~g---~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +|||+||+|-+|..++..+...|.+|+++++    ........+ .+.   ...+ .|..+.+.+.+.++.   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            6999999999999999999889999999864    222333332 222   2211 243443233333432   269999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      |.+++
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.71  E-value=0.012  Score=39.39  Aligned_cols=98  Identities=19%  Similarity=0.196  Sum_probs=71.1

Q ss_pred             HHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCC
Q 027106           28 AGLFEIG-KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        28 ~~l~~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  106 (228)
                      .++.+.. -+-.|++++|.| =|-+|.-.++-++.+|++|+++..++-+.-.+. --|. ++.      ...+.+     
T Consensus        11 d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~-----   76 (163)
T d1v8ba1          11 DGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIV-----   76 (163)
T ss_dssp             HHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHT-----
T ss_pred             HHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHcc-----
Confidence            3443333 347999999999 499999999999999999999999987654443 2232 121      222222     


Q ss_pred             CCccEEEcCcchh--HHHHHHHccccCcEEEEEee
Q 027106          107 DGIDIYFDNVGAE--MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       107 ~~~d~vld~~g~~--~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +..|+++-++|..  .-..-++.|+.+..+...|.
T Consensus        77 ~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          77 DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             ccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence            2479999999984  45667899999999888874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.00078  Score=41.21  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      +|++|+|.|. |..|+++++++...|++|++++.+..
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            5789999995 99999999999999999999997543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.69  E-value=0.0026  Score=44.41  Aligned_cols=89  Identities=21%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|.|+| .|.+|...+++++.+|++|++.++.... +... ..+...   ..   ++.+.+.+     .|+|.-+.
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~---~~---~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQR---VS---TLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEE---CS---SHHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcccc-cchh-hhcccc---cc---chhhcccc-----CCEEEEee
Confidence            3678999999 5999999999999999999999975443 2222 344322   11   33334443     58876655


Q ss_pred             ch-h-----HHHHHHHccccCcEEEEEee
Q 027106          117 GA-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       117 g~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +. +     .-...++.|+++..+|.++.
T Consensus       113 plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCCCeEEecCC
Confidence            42 1     33567889999999999874

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.67  E-value=0.0041  Score=46.98  Aligned_cols=101  Identities=18%  Similarity=0.109  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCcee-eccChhhHHHHHHHHCCCCccE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAF-NYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      ..+|++||=.++  +.|..++.+|+ .+.+|+.++.++...+.+++   ..|.+.+- ...+..++.+.+.. .++.||+
T Consensus       143 ~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~-~~~~fD~  218 (318)
T d1wxxa2         143 RFRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK-EGERFDL  218 (318)
T ss_dssp             GCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH-TTCCEEE
T ss_pred             HhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHh-hhcCCCE
Confidence            457999988773  33444556664 35599999999998888874   34554321 11211133333322 1237999


Q ss_pred             EEcC---cc--h-----------hHHHHHHHccccCcEEEEEeee
Q 027106          112 YFDN---VG--A-----------EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       112 vld~---~g--~-----------~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      |+--   .+  .           ..+..++++|+|||.++.+...
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            8732   11  1           1456778899999999987653

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.67  E-value=0.0047  Score=45.97  Aligned_cols=95  Identities=18%  Similarity=0.093  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC--------Cce-eeccChhhHHHHHHHHCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF--------DDA-FNYKEETDLKAALKRYFP  106 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~--------~~~-~~~~~~~~~~~~~~~~~~  106 (228)
                      ...++|||.|  ||-|..+-.+++..+. +|.+++-+++-.+.++ ++-.        ..+ +...   |..+.+++..+
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~-~~f~~~~~~~~~~r~~i~~~---Da~~~l~~~~~  152 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSK-QFFPDVAIGYEDPRVNLVIG---DGVAFLKNAAE  152 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH-HHCHHHHGGGGSTTEEEEES---CHHHHHHTSCT
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHH-HhchhhhccccCCCcEEEEc---cHHHHHhhccc
Confidence            4557999999  5556666677777675 8999999999888888 5421        111 1111   44555655444


Q ss_pred             CCccEEE-cCcc----------hhHHHHHHHccccCcEEEEE
Q 027106          107 DGIDIYF-DNVG----------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       107 ~~~d~vl-d~~g----------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +.+|+|+ |...          .+.++.+.++|+++|.++.=
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  194 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  194 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEe
Confidence            5899876 4432          12678888999999999884

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=96.66  E-value=0.026  Score=38.26  Aligned_cols=98  Identities=17%  Similarity=0.123  Sum_probs=56.5

Q ss_pred             cCCCCCCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCc
Q 027106           34 GKPKKGEKVFVSAA-SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        34 ~~~~~g~~VlI~ga-~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ..+.+|.+||=.++ +|++|   +. |...|++|+.++.+++..+.+++   .+|...-+...+...+... .....+.|
T Consensus        37 ~~~~~g~~vLDl~~G~G~~~---i~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~-~~~~~~~f  111 (171)
T d1ws6a1          37 LRYPRRGRFLDPFAGSGAVG---LE-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPE-AKAQGERF  111 (171)
T ss_dssp             HHCTTCCEEEEETCSSCHHH---HH-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHH-HHHTTCCE
T ss_pred             ccccCCCeEEEeccccchhh---hh-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhccccc-ccccCCcc
Confidence            35788889987763 34444   33 33468999999999998877753   4566432222222122222 22233479


Q ss_pred             cEEEcCc----c-hhHHHHHH--HccccCcEEEE
Q 027106          110 DIYFDNV----G-AEMQEAAI--ANMNTYGRVAV  136 (228)
Q Consensus       110 d~vld~~----g-~~~~~~~~--~~l~~~G~~v~  136 (228)
                      |+||-.-    + ...+..++  .+++++|.++.
T Consensus       112 D~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         112 TVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             ceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            9997321    2 12333333  46888887765

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.64  E-value=0.013  Score=41.77  Aligned_cols=70  Identities=19%  Similarity=0.125  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -.|.+|+|.| .|.+|..+++++...|++|++++.+..+.+.+.+..|... ++..   +       +..-..|+++-|+
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-~~~~---~-------~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-VAPN---A-------IYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-CCGG---G-------TTTCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-cCCc---c-------cccccccEecccc
Confidence            4789999999 5999999999999999999999999988887775677643 2221   1       1122689998887


Q ss_pred             ch
Q 027106          117 GA  118 (228)
Q Consensus       117 g~  118 (228)
                      -+
T Consensus       105 ~~  106 (230)
T d1leha1         105 LG  106 (230)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.62  E-value=0.0087  Score=40.25  Aligned_cols=87  Identities=16%  Similarity=0.086  Sum_probs=60.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-h
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-E  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-~  119 (228)
                      +|-|+| .|.+|...++-+...|.+|++.++++++.+.+. +.+... .  .   +..+.+++     .|+||-|+.. +
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~-~--~---~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET-A--S---TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C--S---SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh-c--c---cHHHHHhC-----CCeEEEEcCCHH
Confidence            578889 699999988877788999999999999999888 766532 1  1   22223332     6888888864 3


Q ss_pred             HHHH-------HHHccccCcEEEEEeee
Q 027106          120 MQEA-------AIANMNTYGRVAVCGVI  140 (228)
Q Consensus       120 ~~~~-------~~~~l~~~G~~v~~g~~  140 (228)
                      ....       ....++++-.++.+++.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCCC
Confidence            3333       34455666677776653

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=96.59  E-value=0.0061  Score=43.41  Aligned_cols=99  Identities=9%  Similarity=0.020  Sum_probs=62.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCc
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      +....+..++.+||=.|  .|.|..+..+++ .|.+|++++.+++..+.+++.....-.+...+.+++      ..++.|
T Consensus        12 ~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~------~~~~~f   82 (225)
T d2p7ia1          12 VRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA------QLPRRY   82 (225)
T ss_dssp             HHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC------CCSSCE
T ss_pred             HHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc------cccccc
Confidence            33444556788999998  556777666654 578999999999999999844432111111111011      112479


Q ss_pred             cEEEcCc-----ch--hHHHHHH-HccccCcEEEEE
Q 027106          110 DIYFDNV-----GA--EMQEAAI-ANMNTYGRVAVC  137 (228)
Q Consensus       110 d~vld~~-----g~--~~~~~~~-~~l~~~G~~v~~  137 (228)
                      |+|+..-     ..  ..+..+. ++|+|||.++..
T Consensus        83 D~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          83 DNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            9997422     11  2556666 689999998874

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.57  E-value=0.0031  Score=46.27  Aligned_cols=32  Identities=19%  Similarity=0.279  Sum_probs=29.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      +|||+||+|-+|..++..++..|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            69999999999999999999999999999865

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0017  Score=49.81  Aligned_cols=34  Identities=15%  Similarity=0.256  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999999999999999999743

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.56  E-value=0.0037  Score=44.38  Aligned_cols=105  Identities=11%  Similarity=0.124  Sum_probs=66.1

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHH--
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAAL--  101 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~--  101 (228)
                      .|....+..+.++||=+|  ++.|..++.+|+.+  +.+|+.++.+++..+.+++   ..|....+..... +..+.+  
T Consensus        47 lL~~lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~  123 (214)
T d2cl5a1          47 IMDAVIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQ  123 (214)
T ss_dssp             HHHHHHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGG
T ss_pred             HHHHHHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccc
Confidence            343444555668999999  67788888888876  5699999999887777652   4566432332222 333333  


Q ss_pred             -HHHCC-CCccEEE-cCcchh-----HHHHHHHccccCcEEEE
Q 027106          102 -KRYFP-DGIDIYF-DNVGAE-----MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       102 -~~~~~-~~~d~vl-d~~g~~-----~~~~~~~~l~~~G~~v~  136 (228)
                       ..... +.+|.|| |..-..     .+...+++|+|||.++.
T Consensus       124 l~~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         124 LKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             HHHHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             hhhcccccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence             32222 3799876 433322     34456678999997655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.54  E-value=0.0056  Score=42.39  Aligned_cols=40  Identities=13%  Similarity=0.031  Sum_probs=34.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++|.|.|+ |.||...+.++...|.+|++.+.+++.++.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            57999996 99999988888888999999999988776654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.54  E-value=0.0012  Score=48.27  Aligned_cols=34  Identities=15%  Similarity=0.218  Sum_probs=30.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +.|||+||++++|.+.++.+...|++|+++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4689999999999999999999999999999764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.50  E-value=0.0017  Score=49.21  Aligned_cols=33  Identities=15%  Similarity=0.215  Sum_probs=30.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      +++||+||+|-+|..++..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            589999999999999999999999999999974

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.043  Score=36.26  Aligned_cols=96  Identities=11%  Similarity=0.031  Sum_probs=58.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHHHHHHHhCCCceeeccChhhH---HHHH-----------
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG--CYVVGSA--GSKEKVTLLKDKLGFDDAFNYKEETDL---KAAL-----------  101 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~-----------  101 (228)
                      ++|.|.|+||++|..+..+.+...  .+|++.+  ++-+.+.....+|.+..++..++. .+   ...+           
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHH-HHHHHHHHhhhhcccccccc
Confidence            378999999999999999998873  4777655  333444333337888776554432 21   1111           


Q ss_pred             -----HHHCCC-CccEEEcCcch-hHHHHHHHccccCcEEEE
Q 027106          102 -----KRYFPD-GIDIYFDNVGA-EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       102 -----~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~  136 (228)
                           .+.... .+|+|+.+..+ ..+.-.+..++.+=++.+
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                 111122 57888887655 566667777766544433

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.47  E-value=0.0053  Score=42.68  Aligned_cols=89  Identities=12%  Similarity=0.056  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.++.|+| .|.+|...+++++..|.+|++.+.......... ..+...   ..   ++.+.+.+     .|+|..+.+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQATF---HD---SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhh-cccccc---cC---CHHHHHhh-----CCeEEecCC
Confidence            378999999 599999999999999999999986544322222 222211   11   33344443     588876554


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|+++..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence            2 1     33577899999999999874

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=96.45  E-value=0.0012  Score=48.99  Aligned_cols=100  Identities=15%  Similarity=0.101  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHC-CC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF--GCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYF-PD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~-~~  107 (228)
                      ...++.++.+||=.|  .|.|..+..+++..  +.+|++++.++...+.+++.+.... -+..... ++    .+.. ++
T Consensus        21 ~~~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~-d~----~~~~~~~   93 (281)
T d2gh1a1          21 TVWKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG-DA----TEIELND   93 (281)
T ss_dssp             TTSCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES-CT----TTCCCSS
T ss_pred             HHhccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc-cc----ccccccC
Confidence            334678889999998  45688888888865  4699999999998888874332211 0111111 11    1111 23


Q ss_pred             CccEEEcCcc-----h--hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .||+|+....     .  ..++.+.+.|+|||.+++..
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            7999986432     2  37889999999999998865

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.43  E-value=0.0057  Score=38.88  Aligned_cols=39  Identities=15%  Similarity=0.022  Sum_probs=33.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .+++..++|+|.|| |.+|+-+++.++.+|.+|.++.+++
T Consensus        17 ~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             hccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            34566789999996 9999999999999999999999763

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.42  E-value=0.0094  Score=44.62  Aligned_cols=97  Identities=14%  Similarity=0.100  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--ce-----eeccChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFD--DA-----FNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...++|||.|  ||-|..+-.+++.... +|.+++-+++-.+.++ ++-..  ..     +...-. |..+.+++ +.+.
T Consensus       105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~-~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~  179 (312)
T d2b2ca1         105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAK-KFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNE  179 (312)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHH-HHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTC
T ss_pred             CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHH-hhchhhccccCCCCeEEEEc-hHHHHHHh-CCCC
Confidence            4457999999  5566666677777665 8999999999989888 54221  11     111111 44555654 4458


Q ss_pred             ccEEEc-Ccc----------hhHHHHHHHccccCcEEEEEe
Q 027106          109 IDIYFD-NVG----------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vld-~~g----------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||+|+- ...          .+.++.+.++|+++|.++.=+
T Consensus       180 yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         180 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            999873 221          125677888999999998854

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.41  E-value=0.0076  Score=43.44  Aligned_cols=90  Identities=12%  Similarity=0.075  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHC-CCCccEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYF-PDGIDIY  112 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~-~~~~d~v  112 (228)
                      .++++||=.|+  |.|..+..+++ .|.+|++++.+++.++.++++.   |..--+...   ++    ..+. ++.||+|
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~---d~----~~~~~~~~fD~i  105 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ---DI----SNLNINRKFDLI  105 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC---CG----GGCCCSCCEEEE
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc---ch----hhhccccccccc
Confidence            44579999994  45666666665 5889999999999888887432   322111111   11    1222 3479999


Q ss_pred             EcCcch-----------hHHHHHHHccccCcEEEE
Q 027106          113 FDNVGA-----------EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       113 ld~~g~-----------~~~~~~~~~l~~~G~~v~  136 (228)
                      +...+.           ..++.+.++|+|||.++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            854221           167888899999999885

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.38  E-value=0.02  Score=38.98  Aligned_cols=93  Identities=11%  Similarity=-0.001  Sum_probs=57.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .+|-|+| .|.||...+.-+...|.+|+++++++++.+.+. +.++..  .....   ...+ +.+... ..|.++-+..
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~a~---~~~~-~~~~~~-~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEAKGTKVLGAH---SLEE-MVSKLK-KPRRIILLVK   75 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTTTTSSCEECS---SHHH-HHHHBC-SSCEEEECSC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhccccccccchh---hhhh-hhhhhc-ccceEEEecC
Confidence            4688999 699999888888888999999999999998887 544421  11111   1111 111111 3455555543


Q ss_pred             h-h----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +    ..+.....++++-.++.+++
T Consensus        76 ~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          76 AGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             chHHHHHHHHHHHhccccCcEEEecCc
Confidence            2 2    34445556666666666654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0017  Score=46.33  Aligned_cols=102  Identities=13%  Similarity=0.108  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      ...++.+||-.|  .|.|..+..+++..+.+|++++.+++..+.+++.+....  .+..... ++.+ + ....+.+|+|
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~-~-~~~~~~fD~I  131 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQD-F-TPEPDSYDVI  131 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGG-C-CCCSSCEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cccc-c-cccccccccc
Confidence            456778999998  677888888877767799999999999999884433211  1111111 1111 0 1112379999


Q ss_pred             EcC-----cch----hHHHHHHHccccCcEEEEEeeec
Q 027106          113 FDN-----VGA----EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       113 ld~-----~g~----~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +..     ...    ..+..+.+.|+++|.++......
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~~~  169 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA  169 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEccc
Confidence            763     222    26778889999999999876543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.32  E-value=0.0087  Score=40.95  Aligned_cols=54  Identities=17%  Similarity=0.105  Sum_probs=39.7

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 027106           28 AGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus        28 ~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~   83 (228)
                      .+|.+...--+|++|||.|+ ||++.+++..+...| +|+++.|+.++.+.+.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            34444343458889999995 999998876665444 9999999999887765344

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.32  E-value=0.0051  Score=42.69  Aligned_cols=89  Identities=11%  Similarity=0.026  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|.| .|.+|...+++++.+|.+|+..++........+ ..+...   ..   +..+.+.     ..|+|.-+..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGG-----GCSEEEECSC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHH-----hccchhhccc
Confidence            578999999 599999999999999999999997544433333 444322   11   2222332     2688766554


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|+++..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            2 1     44677889999999998874

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0079  Score=44.56  Aligned_cols=98  Identities=16%  Similarity=0.176  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeeccChhhHHHHHHHHCCC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF-------DDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....++|||.|  ||-|..+-.+++..+. +|.+++-+++-.+.++ ++-.       +.-++..-. |....+++ +.+
T Consensus        76 ~~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~-~~~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~  150 (285)
T d2o07a1          76 HPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSK-KFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQD  150 (285)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH-HHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSS
T ss_pred             CcCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHH-hhchhhccccCCCCceEEEc-cHHHHHhc-CCC
Confidence            34567999999  5566667777777655 9999999999888887 4321       111111111 44455554 344


Q ss_pred             CccEEE-cCcch----------hHHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYF-DNVGA----------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vl-d~~g~----------~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+|+|+ |....          +.++.+.+.|+++|.++.=.
T Consensus       151 ~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         151 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            899986 43321          25778889999999998743

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.26  E-value=0.01  Score=43.79  Aligned_cols=36  Identities=14%  Similarity=0.178  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +..+|||+||+|-+|..++..+...|.+|++++|+.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            456799999999999999998888999999998753

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=96.24  E-value=0.0021  Score=46.88  Aligned_cols=97  Identities=10%  Similarity=0.056  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHH-CCCCccE
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRY-FPDGIDI  111 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~-~~~~~d~  111 (228)
                      +++|++||=.|  .|.|..+..+++.-..+|++++.+++.++.+++++   +...-+..... +...  ... ..+.||+
T Consensus        22 ~~~~~~VLDlG--CG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~   96 (252)
T d1ri5a_          22 TKRGDSVLDLG--CGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV   96 (252)
T ss_dssp             CCTTCEEEEET--CTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred             CCCcCEEEEec--ccCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence            57899999999  34466667777764458999999999998887433   22211111110 1000  011 1237999


Q ss_pred             EEcCcch-----------hHHHHHHHccccCcEEEEE
Q 027106          112 YFDNVGA-----------EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       112 vld~~g~-----------~~~~~~~~~l~~~G~~v~~  137 (228)
                      |+....-           ..+..+.+.|+|||.++..
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9764321           1556677899999998864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0013  Score=49.59  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=29.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      ++|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999888889999999874

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.23  E-value=0.0042  Score=42.82  Aligned_cols=83  Identities=23%  Similarity=0.234  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...+++++.+|++|++.++++..        +.....  .   ++.+.+.     ..|+|+.+..
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~--~---~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT--N---SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB--S---CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccccccc--------cceeee--e---chhhhhh-----ccchhhcccc
Confidence            588999999 5999999999999999999999976421        111111  1   2222332     3688887665


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|+++..+|.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence            2 1     33677899999999999874

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=96.18  E-value=0.011  Score=44.30  Aligned_cols=96  Identities=23%  Similarity=0.239  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC--CceeeccChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKL-----GF--DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...++|||.|  +|.|..+-.+++... .+|.+++.+++-.+.+++-+     +.  +.-+..... |..+.+++ +++.
T Consensus        76 ~~pk~VLiiG--~G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~~  151 (312)
T d1uira_          76 PEPKRVLIVG--GGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-DARAYLER-TEER  151 (312)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-CHHHHHHH-CCCC
T ss_pred             CCcceEEEeC--CCchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEc-hHHHHhhh-cCCc
Confidence            4557999999  556677777777765 49999999999888887322     11  110111111 44555554 4458


Q ss_pred             ccEEE-cC---cc----------hhHHHHHHHccccCcEEEE
Q 027106          109 IDIYF-DN---VG----------AEMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       109 ~d~vl-d~---~g----------~~~~~~~~~~l~~~G~~v~  136 (228)
                      +|+|+ |.   .+          .+.++.+.+.|+++|.++.
T Consensus       152 yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~  193 (312)
T d1uira_         152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM  193 (312)
T ss_dssp             EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred             ccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEE
Confidence            99986 33   12          1256788899999998876

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.15  E-value=0.014  Score=40.47  Aligned_cols=80  Identities=15%  Similarity=0.114  Sum_probs=56.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----------ceeeccChhhHHHHHHHHCCCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD-----------DAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      .+|.|.|+ |.+|.+.+..+...|.+|....++++..+.+. +-+..           .+....   ++.+.+.     +
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~---~l~~a~~-----~   77 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS---DVEKAYN-----G   77 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES---CHHHHHT-----T
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch---hhhhccC-----C
Confidence            47999995 99999999888888889999999999888876 43321           111111   3333332     4


Q ss_pred             ccEEEcCcchhHHHHHHHccc
Q 027106          109 IDIYFDNVGAEMQEAAIANMN  129 (228)
Q Consensus       109 ~d~vld~~g~~~~~~~~~~l~  129 (228)
                      .|+|+-+++...+...++.++
T Consensus        78 ad~iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          78 AEIILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             CSCEEECSCHHHHHHHHHHHC
T ss_pred             CCEEEEcCcHHHHHHHHHHHH
Confidence            799999999887777766554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.15  E-value=0.037  Score=36.52  Aligned_cols=94  Identities=15%  Similarity=0.056  Sum_probs=58.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC--CccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD--GIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~d~vld~~g  117 (228)
                      ++|.|+|+.|-+|...+..++..|.+|.+.+++........ ..+++.++...........+.+..+.  .=.+++|+++
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            58999997899999999999999999999998766544443 44555544433322444444443332  1247788776


Q ss_pred             h--hHHHHHHHccccCcEEEE
Q 027106          118 A--EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       118 ~--~~~~~~~~~l~~~G~~v~  136 (228)
                      .  +..+.+.+.+.  ++++.
T Consensus        89 vk~~~~~~~~~~~~--~~~v~  107 (152)
T d2pv7a2          89 VKREPLAKMLEVHT--GAVLG  107 (152)
T ss_dssp             CCHHHHHHHHHHCS--SEEEE
T ss_pred             cCHHHHHHHHHHcc--CCEEE
Confidence            4  34444444332  35543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.013  Score=38.13  Aligned_cols=75  Identities=17%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh
Q 027106           41 KVFVSAASGSVGHLVGQYAKL-FGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  119 (228)
                      +|.|.|++|-||...++.... .+.++.......+......                         ..++|+++|++..+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-------------------------~~~~DvvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-------------------------DGNTEVVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-------------------------TTTCSEEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-------------------------cccCCEEEEcccHH
Confidence            689999999999998887665 4567776543221111111                         12478888888776


Q ss_pred             HHHHHHHccccCcEEEEEeee
Q 027106          120 MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       120 ~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .....++.....|.=+.+|+.
T Consensus        56 ~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          56 VVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             THHHHHHHHHHTTCEEEECCC
T ss_pred             HHHHHHHHHHhcCCCEEEecc
Confidence            665666655555555555654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.12  E-value=0.036  Score=37.56  Aligned_cols=98  Identities=16%  Similarity=0.083  Sum_probs=61.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC--CHHHHHHHHHHhCCCceeeccCh-hhHHHH-------HHHHCCCCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAG--SKEKVTLLKDKLGFDDAFNYKEE-TDLKAA-------LKRYFPDGI  109 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~--~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~-------~~~~~~~~~  109 (228)
                      +|.|.| .|-+|...++.+.... .+++.+..  ......++. +++.+......+. ..+.+.       +.+. ..++
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v   80 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYAASEEFIPRFEKEGFEVAGTLNDL-LEKV   80 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHHTCCCSCBHHHH-HTTC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeecccccceeeecccCccccchhhhh-hccC
Confidence            789999 5999999888776554 47776653  234445555 6665432211111 011110       0011 1269


Q ss_pred             cEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          110 DIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       110 d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |+|+||+|. ...+.+-..+..|-+.|..+.+.
T Consensus        81 DvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          81 DIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             CEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            999999997 56667778888898999887644

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0098  Score=44.58  Aligned_cols=98  Identities=18%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH--HHhCCC-ce--eeccChhhHHHHHHH
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLK--DKLGFD-DA--FNYKEETDLKAALKR  103 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~--~~~g~~-~~--~~~~~~~~~~~~~~~  103 (228)
                      +.+...+.+|++||-.|+  |.|..++.+|+ .|+ +|++++.++......+  .+.+.. .+  +..+.. ++     .
T Consensus        27 i~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~-~l-----~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIE-EV-----H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTT-TS-----C
T ss_pred             HHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHH-Hh-----c
Confidence            444456778999999993  46666666665 476 8999998875432111  133432 22  211111 11     1


Q ss_pred             HCCCCccEEEcC-cc----hh-----HHHHHHHccccCcEEEE
Q 027106          104 YFPDGIDIYFDN-VG----AE-----MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       104 ~~~~~~d~vld~-~g----~~-----~~~~~~~~l~~~G~~v~  136 (228)
                      ...+.+|+|+.. .+    .+     .+...-+.|+|+|+++-
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip  140 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP  140 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence            112379999752 22    11     22233468999998874

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=96.09  E-value=0.0095  Score=43.85  Aligned_cols=96  Identities=15%  Similarity=0.138  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh-----CC--CceeeccChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL-----GF--DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...++|||.|  ||-|..+-.+++..+. +|.+++-+++-.+.++ ++     ++  +.-++.... |....+++ ++..
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~-~~~~~~~~~~~d~r~~i~~~-D~~~~l~~-~~~~  148 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSK-KFLPSIAGKLDDPRVDVQVD-DGFMHIAK-SENQ  148 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHH-HHCHHHHTTTTSTTEEEEES-CSHHHHHT-CCSC
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHH-HhChhhcccccCCCeEEEec-hHHHHHhh-cCCC
Confidence            4567999999  5666777777777665 9999999999888887 43     22  111111111 33444544 3348


Q ss_pred             ccEEE-cCcc----------hhHHHHHHHccccCcEEEEE
Q 027106          109 IDIYF-DNVG----------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vl-d~~g----------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+ |...          .+.++.+.+.|+++|.++.=
T Consensus       149 yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            99986 4322          13688888999999999874

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.08  E-value=0.0073  Score=38.66  Aligned_cols=35  Identities=14%  Similarity=0.145  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ..++++|+|| |.+|+-+++++..+|++|.++.+++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            4579999996 9999999999999999999999764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.08  E-value=0.0094  Score=45.22  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=45.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH--HhCCCc-eeeccChhhHHHHHHHHCCCCccEE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS----KEKVTLLKD--KLGFDD-AFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~----~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +.|||+||+|-+|..++..+...|.+|+++++.    .+.......  .-+... ..|..+.+++...+..   .++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---YKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---SCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            479999999999999998888889999998631    122222220  112221 1233443233333332   269999


Q ss_pred             EcCcc
Q 027106          113 FDNVG  117 (228)
Q Consensus       113 ld~~g  117 (228)
                      +.+++
T Consensus        79 ihlAa   83 (347)
T d1z45a2          79 IHFAG   83 (347)
T ss_dssp             EECCS
T ss_pred             EEccc
Confidence            99875

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.08  E-value=0.013  Score=43.25  Aligned_cols=97  Identities=19%  Similarity=0.168  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------------ceeeccChhhHHHHHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD------------DAFNYKEETDLKAALKRY  104 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~  104 (228)
                      ...++|||.|  ||.|..+-.+++.-..+|.+++-+++-.+.+++-++..            .-+..... |....+++ 
T Consensus        71 ~~p~~vLiiG--~G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~-Da~~~l~~-  146 (276)
T d1mjfa_          71 PKPKRVLVIG--GGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN-  146 (276)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH-
T ss_pred             CCCceEEEec--CCchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC-hHHHHHhc-
Confidence            5567999999  44455555666654458999999999888888333321            10111111 34444543 


Q ss_pred             CCCCccEEE-cCcch----------hHHHHHHHccccCcEEEEEe
Q 027106          105 FPDGIDIYF-DNVGA----------EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       105 ~~~~~d~vl-d~~g~----------~~~~~~~~~l~~~G~~v~~g  138 (228)
                       .+++|+|+ |....          +.++.+.+.|+++|.++.=+
T Consensus       147 -~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         147 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence             34799986 33321          25788889999999988743

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.014  Score=42.96  Aligned_cols=103  Identities=14%  Similarity=0.108  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc-----C--CEEEEEeCCHHHHHHHHHHhCC----Cc-eeeccCh--hhHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLF-----G--CYVVGSAGSKEKVTLLKDKLGF----DD-AFNYKEE--TDLKAA  100 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~-----g--~~V~~~~~~~~~~~~~~~~~g~----~~-~~~~~~~--~~~~~~  100 (228)
                      ..+++-+||=.|  .|.|..+..+++..     +  .++++++.++..++.+++....    .. .++....  +++...
T Consensus        37 ~~~~~~~VLDiG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (280)
T d1jqea_          37 DTKSEIKILSIG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSR  114 (280)
T ss_dssp             TTCSEEEEEEET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHH
T ss_pred             cCCCCCeEEEEc--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcch
Confidence            344555899998  44455555554432     2  3678999999988888744332    11 1222221  122222


Q ss_pred             HHHHC-CCCccEEEcCcc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          101 LKRYF-PDGIDIYFDNVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       101 ~~~~~-~~~~d~vld~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ..... ++.||+|+....     .  ..+..+.++|+|+|.++....
T Consensus       115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            22222 238999975322     1  388899999999999888654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.06  E-value=0.055  Score=36.05  Aligned_cols=92  Identities=16%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHcCC-EEEEEeC-CHH--HHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           40 EKVFVSAASGSVGH-LVGQYAKLFGC-YVVGSAG-SKE--KVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        40 ~~VlI~ga~g~~G~-~a~~~a~~~g~-~V~~~~~-~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      =+|.|.| +|.+|. ..+++.+.... +++.+++ +.+  ...+++ ++|.....  .   .+...+......++|+||.
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~~--~---~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTTY--A---GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEES--S---HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCcccc--c---ceeeeeecccccccCEEEE
Confidence            4789999 699986 46678776544 7777654 333  335556 78765321  1   2222222111136999999


Q ss_pred             Ccch-hHHHHH--HHccccCcEEEEEe
Q 027106          115 NVGA-EMQEAA--IANMNTYGRVAVCG  138 (228)
Q Consensus       115 ~~g~-~~~~~~--~~~l~~~G~~v~~g  138 (228)
                      +++. ......  .+.++.|-.++...
T Consensus        78 ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            8875 444433  44455555555543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.04  E-value=0.012  Score=37.41  Aligned_cols=45  Identities=20%  Similarity=0.184  Sum_probs=35.5

Q ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           25 TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        25 ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++..++ +.  -+..++++|.|| |.+|+-+++.++.+|++|.++.+++
T Consensus        11 ~s~~~l-~l--~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          11 DSTGAL-DF--QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EHHHHT-SC--SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             chhHhh-Cc--ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            455555 22  134589999996 9999999999999999999999663

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.01  E-value=0.062  Score=35.98  Aligned_cols=135  Identities=9%  Similarity=0.068  Sum_probs=77.8

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch
Q 027106           41 KVFVSAASGSVGHL-VGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~-a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  118 (228)
                      +|.|+|+ |.+|.. .+...+.. +.++++++.++++.+.+.++++...+++.-+  +   .+.    ..+|+|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~---ll~----~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR--D---VLQ----YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT--G---GGG----GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH--H---hcc----cccceecccccc
Confidence            6889994 999854 55555555 4588888888888888876788765432211  1   111    258999988887


Q ss_pred             -hHHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHH-Hhhhcee-eceecccchhHHHHHHHHHHHHHHcCCCccc
Q 027106          119 -EMQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDV-IYKRIKF-QGFLAADHLNLYQDFISTTCNHLRSGAIYPL  195 (228)
Q Consensus       119 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~  195 (228)
                       ...+.+..++..| +=|.+.-+-..++  .. ....... ..++..+ .++.  .    ....+.++.+.+..|++...
T Consensus        73 ~~H~~~~~~al~~g-k~V~~EKP~~~~~--~e-~~~l~~~a~~~~~~~~vg~~--r----~~~~~~~~~~~~~~G~ig~~  142 (167)
T d1xeaa1          73 DVHSTLAAFFLHLG-IPTFVDKPLAASA--QE-CENLYELAEKHHQPLYVGFN--G----FDAMVQDWLQVAAAGKLPTH  142 (167)
T ss_dssp             GGHHHHHHHHHHTT-CCEEEESCSCSSH--HH-HHHHHHHHHHTTCCEEEECG--T----HHHHHHHHHHHHHHTCCCHH
T ss_pred             cccccccccccccc-cccccCCCCcCCH--HH-HHHHHHHHHHcCCEEEEEeC--c----CCHHHHHHHHHhhcCCCCcE
Confidence             4777777788765 4355543322110  00 0111111 2223322 2221  1    13557778888888887643

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.01  E-value=0.012  Score=41.17  Aligned_cols=85  Identities=26%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|.| .|.+|..++++++.+|++|++.++...+        +....+...   ++.+.+..     .|+|.-+..
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccch--------hhhcchhHH---HHHHHHHh-----cccceeeec
Confidence            468999999 5999999999999999999999975432        111111222   33333333     577766554


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      . +     .-...++.|+++..+|.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence            2 2     34667889999999999874

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.0023  Score=43.21  Aligned_cols=87  Identities=14%  Similarity=0.088  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-----eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-----AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|+|+|+ |.+|.+.+..+...|.+|.++++++++.+... ..+...     .+....    .+.+     +.+|++|-+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~-----~~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTAND----PDFL-----ATSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESC----HHHH-----HTCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccch----hhhh-----cccceEEEe
Confidence            7999996 99999888888888999999998876443222 222211     111111    1122     258999998


Q ss_pred             cchhH----HHHHHHccccCcEEEEEe
Q 027106          116 VGAEM----QEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~g~~~----~~~~~~~l~~~G~~v~~g  138 (228)
                      +....    ++.+...+.++..++.+.
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ecccchHHHHHhhccccCcccEEeecc
Confidence            87643    334444555666666654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.99  E-value=0.0071  Score=46.19  Aligned_cols=36  Identities=22%  Similarity=0.309  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ..+.+|||+||+|-+|..++..+...|.+|+++++.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            357799999999999999999999999999999754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.076  Score=34.94  Aligned_cols=96  Identities=10%  Similarity=0.006  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHH--hCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKV-TLLKDK--LGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      +.+.|+|.|. |.+|..+++.+...|.+|++++.++++. +.+.+.  .|... + ..+. .-.+.+++..-...|.++-
T Consensus         2 ~knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~v-i-~Gd~-~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADV-I-PGDS-NDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEE-E-ESCT-TSHHHHHHHTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEE-E-EccC-cchHHHHHhccccCCEEEE
Confidence            3468999996 9999999999999999999998776543 233312  23322 2 2222 2223344433336889988


Q ss_pred             Ccchh----HHHHHHHccccCcEEEEE
Q 027106          115 NVGAE----MQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       115 ~~g~~----~~~~~~~~l~~~G~~v~~  137 (228)
                      +++.+    ......+.+.+.-+++..
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            88764    223334555666666654

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=95.96  E-value=0.02  Score=41.46  Aligned_cols=100  Identities=13%  Similarity=0.094  Sum_probs=63.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+....+||-+|  +|.|..+..+++.. +.++++++. ++..+.+++   +.|....+..... ++    .+..++
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D~----~~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-DF----FEPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-CT----TSCCSS
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-cc----hhhccc
Confidence            445678888999999  77888899999887 468988885 444444442   3343221221111 21    111223


Q ss_pred             CccEEEcCc-----ch----hHHHHHHHccccCcEEEEEee
Q 027106          108 GIDIYFDNV-----GA----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       108 ~~d~vld~~-----g~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++|+|+-..     +.    ..++.+.++|+|||++++...
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            799987421     22    257888999999999998764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.0055  Score=42.15  Aligned_cols=38  Identities=21%  Similarity=0.132  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      ...+++|+|+|| |+.|+.++..+...|.+|++++..+.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            356789999996 99999999999999999999997653

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=95.89  E-value=0.029  Score=40.68  Aligned_cols=100  Identities=13%  Similarity=0.093  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ....+....+||-+|  +|.|..+..+++.. +.++++++. ++..+.+++   +.|....+..... ++.    +..+.
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~----~~~p~  146 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFF----KPLPV  146 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSC
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ecc----ccccc
Confidence            445677888999998  78889999999987 569999995 555555442   3344221211111 111    11123


Q ss_pred             CccEEEcC--c---ch----hHHHHHHHccccCcEEEEEee
Q 027106          108 GIDIYFDN--V---GA----EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       108 ~~d~vld~--~---g~----~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ++|+++-.  .   +.    ..++.+.+.|+|||+++++..
T Consensus       147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            68988632  1   21    257888999999999999875

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.89  E-value=0.0088  Score=41.96  Aligned_cols=68  Identities=16%  Similarity=0.140  Sum_probs=42.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      ++|||+||+|-+|..++..+...|.  +|++..+++..        .... +..... ++.+. .....+.+|.|++|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~-~~~~~~-d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPR-LDNPVG-PLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTT-EECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hccc-cccccc-chhhh-hhccccchheeeeeee
Confidence            6999999999999999998888886  67766654311        1111 121111 33322 2223346899999876


Q ss_pred             h
Q 027106          118 A  118 (228)
Q Consensus       118 ~  118 (228)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.87  E-value=0.019  Score=38.58  Aligned_cols=43  Identities=14%  Similarity=0.023  Sum_probs=37.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      +|-++| .|-+|...+.-+...|.+|++.++++++.+.+. ..+.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~   45 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGA   45 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTC
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhc
Confidence            688999 699999888877778999999999999988887 6665

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=95.87  E-value=0.0046  Score=46.84  Aligned_cols=73  Identities=11%  Similarity=0.093  Sum_probs=45.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|-+|..+++.+...| .+|++++....+...+.+......+ .|..+..++.+.+.+    ++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCccccccc
Confidence            69999999999999998877778 5899998755443333311111111 122222133333322    4899999876

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.0066  Score=38.19  Aligned_cols=82  Identities=11%  Similarity=0.178  Sum_probs=49.9

Q ss_pred             CCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEE-
Q 027106           36 PKKG-EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIY-  112 (228)
Q Consensus        36 ~~~g-~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v-  112 (228)
                      +.++ .+|.|.|| |-+|.+.++-|+.+|.++++.+.+++.-  +. ...... +.++++.+...+.....   ++|+| 
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~P--A~-~va~~~i~~~~~d~~~l~~~~~~~---~~DviT   79 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP--AM-HVAHRSHVINMLDGDALRRVVELE---KPHYIV   79 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG--GG-GGSSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCc--hh-hcCCeEEECCCCCHHHHHHHHHhh---CCceEE
Confidence            3444 46999996 9999999999999999999999765431  11 232222 23444431222222211   47887 


Q ss_pred             --EcCcchhHHHHH
Q 027106          113 --FDNVGAEMQEAA  124 (228)
Q Consensus       113 --ld~~g~~~~~~~  124 (228)
                        ++....+.+..+
T Consensus        80 ~E~EnI~~~~L~~l   93 (111)
T d1kjqa2          80 PEIEAIATDMLIQL   93 (111)
T ss_dssp             ECSSCSCHHHHHHH
T ss_pred             EEecCcCHHHHHHH
Confidence              566665554433

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.83  E-value=0.078  Score=36.53  Aligned_cols=106  Identities=20%  Similarity=0.210  Sum_probs=64.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCC-ceeeccChhhHHHHHHHHCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKL---GFD-DAFNYKEETDLKAALKRYFP  106 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~  106 (228)
                      ....+++|+.++= . +.|.|-.+-.+++.. +++|++++.+++..+.+++.+   +.. .++..+-. ++...+.....
T Consensus        17 ~~l~~~~~~~~lD-~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKIILD-C-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEEEE-T-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTC
T ss_pred             HhhCCCCCCEEEE-e-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCC
Confidence            4456788887644 4 344444444455544 679999999999999888433   321 22333322 55545555444


Q ss_pred             CCccEEE-cCcc-h--------------hHHHHHHHccccCcEEEEEeee
Q 027106          107 DGIDIYF-DNVG-A--------------EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       107 ~~~d~vl-d~~g-~--------------~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      +.+|.|+ |..- +              ..+..+.+.|+++|+++.+...
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            5898864 4211 0              2556677899999999987643

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.83  E-value=0.015  Score=36.83  Aligned_cols=41  Identities=17%  Similarity=0.084  Sum_probs=35.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +.....++++|+|.|+ |.+|+-.+..++..|.+|.++.+++
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4456778999999996 9999999999999999999999764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.79  E-value=0.15  Score=34.56  Aligned_cols=90  Identities=14%  Similarity=0.120  Sum_probs=59.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEE-eCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGS-AGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|.|+| .|.+|...++..+.. +.+|+++ +.++++.+.+.++++.... -.++   ++.+.+..   ..+|+|+-+++
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            688999 599998888877766 5688755 5677776666547776331 1222   33433332   36899998888


Q ss_pred             h-hHHHHHHHccccCcEEEEEe
Q 027106          118 A-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       118 ~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      . ...+.+..++..| +=|.+.
T Consensus        76 ~~~h~~~~~~~l~~g-~~v~~E   96 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKG-KHILLE   96 (184)
T ss_dssp             GGGHHHHHHHHHTTT-CEEEEC
T ss_pred             chhhcchhhhhhhcc-ceeecc
Confidence            7 4777888888865 444444

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.76  E-value=0.15  Score=34.48  Aligned_cols=136  Identities=9%  Similarity=0.004  Sum_probs=77.1

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHcC--CEEEE-EeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           41 KVFVSAASGSVGHL-VGQYAKLFG--CYVVG-SAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        41 ~VlI~ga~g~~G~~-a~~~a~~~g--~~V~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|.|+| +|.+|.- .+...+..+  .++++ +++++++.+.+.++++...+++     ++.+.+..   ..+|+|+-|+
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHHS---SCCSEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeeccccc---cccceeeccc
Confidence            688999 5999964 466666543  36775 4567777777665788655432     33333332   3689998888


Q ss_pred             chh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccch---HHHHh-hhcee-eceecccchhHHHHHHHHHHHHHHcC
Q 027106          117 GAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEM---LDVIY-KRIKF-QGFLAADHLNLYQDFISTTCNHLRSG  190 (228)
Q Consensus       117 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g  190 (228)
                      ... ....+..++..| +=|.+.-+-..+      ....   ..... ++..+ .++...  ...+...+..+.+++.+|
T Consensus        76 p~~~h~~~~~~al~~g-k~V~~EKPl~~~------~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G  146 (181)
T d1zh8a1          76 PVELNLPFIEKALRKG-VHVICEKPISTD------VETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEG  146 (181)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEESSSSSS------HHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSC
T ss_pred             cccccccccccccccc-hhhhcCCCCcCC------HHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCC
Confidence            764 677777777764 555554332111      1111   11221 22222 222211  112346678888999998


Q ss_pred             CCcc
Q 027106          191 AIYP  194 (228)
Q Consensus       191 ~i~~  194 (228)
                      ++-.
T Consensus       147 ~ig~  150 (181)
T d1zh8a1         147 KPND  150 (181)
T ss_dssp             CCCS
T ss_pred             CCcc
Confidence            8753

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.73  E-value=0.015  Score=43.24  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-------CceeeccChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGF-------DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ...++|||.|  ||-|..+-.+++..+. +|.+++.+++-.+.++ ++-.       +.-+...-. |..+.+++ +++.
T Consensus        88 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~-~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  162 (295)
T d1inla_          88 PNPKKVLIIG--GGDGGTLREVLKHDSVEKAILCEVDGLVIEAAR-KYLKQTSCGFDDPRAEIVIA-NGAEYVRK-FKNE  162 (295)
T ss_dssp             SSCCEEEEEE--CTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHH-HHCHHHHGGGGCTTEEEEES-CHHHHGGG-CSSC
T ss_pred             CCCceEEEec--CCchHHHHHHHhcCCCceEEEecCCHHHHHHHH-HHHHhhcccccCCCcEEEhh-hHHHHHhc-CCCC
Confidence            3457999999  4555666677777654 8999999999888887 5321       110111111 44455544 3448


Q ss_pred             ccEEE-cCcc-----------hhHHHHHHHccccCcEEEEE
Q 027106          109 IDIYF-DNVG-----------AEMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       109 ~d~vl-d~~g-----------~~~~~~~~~~l~~~G~~v~~  137 (228)
                      +|+|+ |+..           .+.++.+.+.|+++|.++.=
T Consensus       163 yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q  203 (295)
T d1inla_         163 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE  203 (295)
T ss_dssp             EEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEe
Confidence            99986 3321           12677888999999999874

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.71  E-value=0.0044  Score=42.81  Aligned_cols=35  Identities=11%  Similarity=0.106  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKE   74 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~   74 (228)
                      +++|+|+|| |+.|+.++..++..|+ .|+++++++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            679999996 9999999999999998 5889987654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.017  Score=36.46  Aligned_cols=34  Identities=24%  Similarity=0.145  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .++|+|.|| |.+|+-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999996 9999999999999999999999764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.68  E-value=0.005  Score=46.88  Aligned_cols=39  Identities=21%  Similarity=0.191  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEK   75 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~   75 (228)
                      ++.++|||+||+|.+|..++..+...|.+|++++|+..+
T Consensus         1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            356799999999999999999988899999999986543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.65  E-value=0.01  Score=38.02  Aligned_cols=36  Identities=22%  Similarity=0.173  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +..++++|.|| |.+|+=++++++.+|.+|.++.+++
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            45689999996 9999999999999999999999764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.0081  Score=44.90  Aligned_cols=34  Identities=18%  Similarity=0.258  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++|||+||+|-+|..++..+...|.+|+++++..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            4899999999999999998888899999998743

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.035  Score=38.21  Aligned_cols=85  Identities=20%  Similarity=0.203  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .|.+|.|+| .|.+|...+++++..|++|+..++....        .........   ++.+.+.+     .|+|.-+.+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccc--------hhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            578999999 5999999999999999999999865321        111112222   33444443     588877655


Q ss_pred             h-h-----HHHHHHHccccCcEEEEEee
Q 027106          118 A-E-----MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       118 ~-~-----~~~~~~~~l~~~G~~v~~g~  139 (228)
                      - +     .-.+.++.|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence            2 2     44677899999999999874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.53  E-value=0.0076  Score=40.07  Aligned_cols=83  Identities=13%  Similarity=0.065  Sum_probs=51.5

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhHHH
Q 027106           43 FVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEMQE  122 (228)
Q Consensus        43 lI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~  122 (228)
                      =++| +|-||.+.++.++..+..+.+..|++++.+.+.++.+. ...+..+.           -...|+||-|+..+.+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~-----------~~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATLEKH-----------PELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC-----------CC---CEEECSCTTTHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccchhhh-----------hccCcEEEEeccchhhh
Confidence            3667 59999988776654333345788999999988844443 32222221           12479999999888888


Q ss_pred             HHHHccccCcE-EEEEe
Q 027106          123 AAIANMNTYGR-VAVCG  138 (228)
Q Consensus       123 ~~~~~l~~~G~-~v~~g  138 (228)
                      ..++.++..|+ ++.++
T Consensus        70 ~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          70 TVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHTTTCCSSCCEEECC
T ss_pred             HHHhhhcccceeeeecc
Confidence            88888875444 44444

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.53  E-value=0.021  Score=36.41  Aligned_cols=72  Identities=15%  Similarity=0.085  Sum_probs=47.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-Ccc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d  110 (228)
                      ....-.++++|+|.|| |.+|+-+++.+...|.+|+++.+.+.-       ++  ..+   +. +..+.+.+.... |++
T Consensus        23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~-------l~--~~~---d~-~~~~~~~~~l~~~gv~   88 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP-------LG--VYL---DK-EFTDVLTEEMEANNIT   88 (123)
T ss_dssp             HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST-------TT--TTC---CH-HHHHHHHHHHHTTTEE
T ss_pred             HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc-------cc--ccc---ch-hhHHHHHHHhhcCCeE
Confidence            4344456789999996 999999999999999999999866321       11  111   12 444455444333 788


Q ss_pred             EEEcCcc
Q 027106          111 IYFDNVG  117 (228)
Q Consensus       111 ~vld~~g  117 (228)
                      +.+++.-
T Consensus        89 ~~~~~~v   95 (123)
T d1nhpa2          89 IATGETV   95 (123)
T ss_dssp             EEESCCE
T ss_pred             EEeCceE
Confidence            8776543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.49  E-value=0.016  Score=37.01  Aligned_cols=34  Identities=21%  Similarity=0.050  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ..++++|.|| |.+|+-.+++++.+|.+|.++.++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4568999996 999999999999999999998754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.46  E-value=0.011  Score=44.50  Aligned_cols=92  Identities=20%  Similarity=0.146  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCc-e--eeccChhhHHHHHHHHCCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDD-A--FNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~~~~~~~~  107 (228)
                      .+.+|++||-.|+  |.|..++.+|+ .|+ +|++++.++.. ..+++   ..+... +  +..+.. ++     ....+
T Consensus        30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred             ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence            4568999999983  44776666555 576 89999977542 33321   344432 2  111111 11     11123


Q ss_pred             CccEEEcC-cc----h-----hHHHHHHHccccCcEEEE
Q 027106          108 GIDIYFDN-VG----A-----EMQEAAIANMNTYGRVAV  136 (228)
Q Consensus       108 ~~d~vld~-~g----~-----~~~~~~~~~l~~~G~~v~  136 (228)
                      .+|+|+.. .+    .     ..+...-++|+|+|+++-
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~iiP  138 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP  138 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEEe
Confidence            79998642 22    1     144455689999998873

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.44  E-value=0.025  Score=36.20  Aligned_cols=36  Identities=14%  Similarity=0.159  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +..++++|.|| |.+|+=++++.+.+|.+|.++.+.+
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            45689999996 9999999999999999999999753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.44  E-value=0.015  Score=36.74  Aligned_cols=36  Identities=22%  Similarity=0.262  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      +..++++|.|| |.+|+-+++.+..+|.+|.++.+.+
T Consensus        20 ~~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            34579999996 9999999999999999999999764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.022  Score=39.49  Aligned_cols=40  Identities=25%  Similarity=0.211  Sum_probs=35.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      ++|.|.|+ |.+|...++++...|.+|++++.+++.++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            58999996 99999999999999999999999998776654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.39  E-value=0.058  Score=35.74  Aligned_cols=147  Identities=16%  Similarity=0.026  Sum_probs=74.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhCCCc-eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGC---YVVGSAGSKEKVTLLKDKLGFDD-AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~---~V~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      |-+|.|.||+|-+|.-+++++.....   ++...+++........ ...... ..+..+.          .....|+++-
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~~----------~~~~~d~~f~   69 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTET----------AFEGVDIALF   69 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCTT----------TTTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccchh----------hhhhhhhhhh
Confidence            45899999999999999999987642   5555553322111110 000000 1111111          1125789988


Q ss_pred             Ccchh-HHHHHHHccccCcEEEEEeeecccCCCcCCCccchHHHHhhhceeeceecccchhHHHHHHHHHHHHHHcCCCc
Q 027106          115 NVGAE-MQEAAIANMNTYGRVAVCGVISEYTDGKKRAAPEMLDVIYKRIKFQGFLAADHLNLYQDFISTTCNHLRSGAIY  193 (228)
Q Consensus       115 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~  193 (228)
                      +.+.. .....-+....+-+++..+..-..   .+..+.-.-......+.-......+ +.=....+.-+..+++.|.++
T Consensus        70 ~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~---~~~~~~~~pe~n~~~~~~~~~iIAn-PgC~tt~i~~l~PL~~~~lik  145 (154)
T d2gz1a1          70 SAGSSTSAKYAPYAVKAGVVVVDNTSYFRQ---NPDVPLVVPEVNAHALDAHNGIIAC-PNAAWNSVQIAETLHERGLVR  145 (154)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEECSSTTTT---CTTSCBCCHHHHGGGGGGCCSEEEC-CCTHHHHHHHHHHHHHTTCCS
T ss_pred             ccCccchhhHHhhhccccceehhcChhhhc---cCCcccccchhhHHHhcCcCceEEC-CCCHHHHHHHHHHHHHhcCCC
Confidence            88874 555555666777888887643221   1111222222222222111111111 100122333467888999999


Q ss_pred             cccceec
Q 027106          194 PLEDISD  200 (228)
Q Consensus       194 ~~~~~~~  200 (228)
                      +....+|
T Consensus       146 ~~~~~~~  152 (154)
T d2gz1a1         146 PTAELKF  152 (154)
T ss_dssp             CCSSCCS
T ss_pred             ccceeee
Confidence            8766554

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=95.39  E-value=0.011  Score=41.26  Aligned_cols=90  Identities=13%  Similarity=0.048  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      .+.++.+||=.|+  |.|..+..+     .++++++.++...+.++ +-+... +..+.. ++     ...++.||+|+.
T Consensus        33 ~~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~~-~~~d~~-~l-----~~~~~~fD~I~~   97 (208)
T d1vlma_          33 CLLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVFV-LKGTAE-NL-----PLKDESFDFALM   97 (208)
T ss_dssp             HHCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCEE-EECBTT-BC-----CSCTTCEEEEEE
T ss_pred             hhCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-cccccc-cccccc-cc-----cccccccccccc
Confidence            3567789999994  345554444     35789999999999988 555432 222111 11     111237999986


Q ss_pred             Ccc-----h--hHHHHHHHccccCcEEEEEee
Q 027106          115 NVG-----A--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       115 ~~g-----~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      ...     .  ..++.+.+.|+|||.++....
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCCceEEEEec
Confidence            332     2  378889999999999988653

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0057  Score=44.30  Aligned_cols=46  Identities=11%  Similarity=-0.163  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK   82 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~   82 (228)
                      ...+|++||=.|+ | .|.....+++..+.+|++++-++...+.+++.
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            4567889999984 3 35444444444334899999999999888743

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.39  E-value=0.01  Score=44.88  Aligned_cols=93  Identities=24%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCc-e--eeccChhhHHHHHHHHCC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDD-A--FNYKEETDLKAALKRYFP  106 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~~~~~~~  106 (228)
                      ..+.+|++||-.|+  |.|..++.+|+ .|+ +|++++.++ ..+.+++   +.+... +  +..+.. ++     .+..
T Consensus        34 ~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            34568999999993  45666655444 676 899999775 3333331   344422 2  211111 11     1112


Q ss_pred             CCccEEEcCc-c----h-h----HHHHHHHccccCcEEEE
Q 027106          107 DGIDIYFDNV-G----A-E----MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       107 ~~~d~vld~~-g----~-~----~~~~~~~~l~~~G~~v~  136 (228)
                      +.+|+|+... +    . .    .+...-++|+|+|+++-
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~iiP  143 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP  143 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEEe
Confidence            3799987521 1    1 1    34444579999998863

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.36  E-value=0.0096  Score=43.00  Aligned_cols=34  Identities=15%  Similarity=0.041  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ..++|+|+|| |..|++++..++..|.+|++++++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3579999996 999999999988899999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.36  E-value=0.0085  Score=44.09  Aligned_cols=34  Identities=24%  Similarity=0.200  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |++|+|+|| |..|++++..++..|.+|.+++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999996 9999999999999999999998653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.33  E-value=0.027  Score=42.50  Aligned_cols=31  Identities=26%  Similarity=0.193  Sum_probs=28.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSA   70 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~   70 (228)
                      ++|||+||+|-+|..++..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            6899999999999999998888999999986

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=95.33  E-value=0.03  Score=42.02  Aligned_cols=100  Identities=11%  Similarity=0.053  Sum_probs=60.7

Q ss_pred             cCCCCCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CC--Cce-eeccChhhHHHHHHHH-
Q 027106           34 GKPKKGEKVFVSA-ASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL---GF--DDA-FNYKEETDLKAALKRY-  104 (228)
Q Consensus        34 ~~~~~g~~VlI~g-a~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~--~~~-~~~~~~~~~~~~~~~~-  104 (228)
                      ..+.+|++||=.. ++|+.+   +..+ ..|+ .|+.++.++...+.+++.+   |.  +.+ +...   +..+.+... 
T Consensus       140 ~~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~---d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM---DVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES---CHHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc---cHHHHHHHHH
Confidence            4578899998765 234443   3333 3577 8999999998888877432   33  221 1112   333333322 


Q ss_pred             -CCCCccEEEcC---cc-------------hhHHHHHHHccccCcEEEEEeee
Q 027106          105 -FPDGIDIYFDN---VG-------------AEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       105 -~~~~~d~vld~---~g-------------~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                       .++.||+|+--   .+             ...+..++++|+|||.++.+...
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence             12379998732   11             02667788999999999987653

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=95.28  E-value=0.11  Score=36.20  Aligned_cols=96  Identities=10%  Similarity=0.034  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      +..||=+|  .|.|..++.+|+.. +..+++++.++.....+.+   +.|.+.+.-...  +.......+.++.+|.|+-
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhhhhcccCchhhhcccc
Confidence            44677777  67888889999875 5699999999887766542   456654322221  2222222233347887653


Q ss_pred             Ccc---------------hhHHHHHHHccccCcEEEEEe
Q 027106          115 NVG---------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       115 ~~g---------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ...               ...+..+.+.|+|||.+....
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            322               136788889999999998864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.27  E-value=0.05  Score=37.06  Aligned_cols=96  Identities=14%  Similarity=0.088  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHhCCCceeeccChhhHHH-------HHHHHCCCCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGS--KEKVTLLKDKLGFDDAFNYKEETDLKA-------ALKRYFPDGID  110 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~d  110 (228)
                      +|.|.| .|-+|+.+++.+.... .+++++...  ......+. ..+............+.+       .+.+. ..++|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~-~~~vD   79 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDL-IKTSD   79 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHH-HHHCS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhh-hhcCC
Confidence            688999 6999999999888664 588877642  23334444 444322111111001000       00000 01489


Q ss_pred             EEEcCcch-hHHHHHHHccccCcEEEEEee
Q 027106          111 IYFDNVGA-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       111 ~vld~~g~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      +|+||+|. ...+.+-.++..+-+++..+.
T Consensus        80 iViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             EEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            99999997 455556667766667776543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.25  E-value=0.16  Score=34.14  Aligned_cols=96  Identities=17%  Similarity=0.129  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC-C-HHHHHHHHHHhCCCceeeccCh-hhHHH-------HHHHHCCCCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAG-S-KEKVTLLKDKLGFDDAFNYKEE-TDLKA-------ALKRYFPDGI  109 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~-~~~~~-------~~~~~~~~~~  109 (228)
                      +|.|.| -|-+|..+.+.+...+ .+++.+.. + .....++. +++.+......+. ..+.+       ...+.. .++
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            688998 6999999998876655 47776553 2 23445555 5665432222111 01110       000110 269


Q ss_pred             cEEEcCcch-hHHHHHHHccccCcEEEEEee
Q 027106          110 DIYFDNVGA-EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       110 d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      |+|+||+|. .....+-..+..|-+.+..+.
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~  110 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGG  110 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECC
Confidence            999999997 455666677878888877654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.25  E-value=0.0094  Score=43.75  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .++|||+||+|-+|..++..+...|.+|++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            46899999999999999999988999999998753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.14  E-value=0.015  Score=37.49  Aligned_cols=72  Identities=19%  Similarity=0.166  Sum_probs=48.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchhH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAEM  120 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  120 (228)
                      +|.|+|++|-+|.+..+++...+.+++.......              .   +  .         -..+|+++|++..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~--------------~---~--~---------~~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--------------V---E--E---------LDSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--------------E---E--E---------CSCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc--------------H---H--H---------hccCCEEEEecCHHH
Confidence            6899999999999999999988887765431100              0   0  0         014788999888876


Q ss_pred             HHHHHHccccCcEEEEEeee
Q 027106          121 QEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       121 ~~~~~~~l~~~G~~v~~g~~  140 (228)
                      ....++.....+.=+.+|+.
T Consensus        54 ~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             HHHHHHHHHhcCCCEEEEcC
Confidence            66666666555555566654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.14  E-value=0.0087  Score=34.91  Aligned_cols=34  Identities=24%  Similarity=0.290  Sum_probs=30.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      ++|.|.|+ |-+|.+.++-++.+|.++++.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999995 99999999999999999999996543

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=95.12  E-value=0.38  Score=35.07  Aligned_cols=106  Identities=15%  Similarity=0.136  Sum_probs=65.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCceeeccCh--------------
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFDDAFNYKEE--------------   94 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~~~~~~~~~--------------   94 (228)
                      +.+.+.++.+|.... +|..|++++..|+.+|.+.+++.   .++.+.+.++ .+|++-++...+.              
T Consensus        53 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          53 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HTTSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccc
Confidence            445666666655555 79999999999999998655444   2666778887 8887532221111              


Q ss_pred             -------------hh-------HHHHHHHHCCCCccEEEcCcch-h---HHHHHHHccccCcEEEEEee
Q 027106           95 -------------TD-------LKAALKRYFPDGIDIYFDNVGA-E---MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        95 -------------~~-------~~~~~~~~~~~~~d~vld~~g~-~---~~~~~~~~l~~~G~~v~~g~  139 (228)
                                   ..       ...++.+-.++.+|+++.+.|+ .   .+...++...+..+++-+..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                         00       1122222233468998887764 3   34455666777888876654

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.12  E-value=0.12  Score=39.49  Aligned_cols=98  Identities=16%  Similarity=0.099  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCce--------------eeccChhhHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKL---GFDDA--------------FNYKEETDLKA   99 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~~~--------------~~~~~~~~~~~   99 (228)
                      ++.+||- + .++.|...+++|+..|+ +|++.+.+++..+.+++.+   +....              +..... +.. 
T Consensus        45 ~~~~vLD-~-~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~-  120 (375)
T d2dula1          45 NPKIVLD-A-LSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DAN-  120 (375)
T ss_dssp             CCSEEEE-S-SCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHH-
T ss_pred             CCCEEEE-c-CCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhh-
Confidence            4445443 3 57889999999998888 8999999999998887422   22110              111111 222 


Q ss_pred             HHHHHCCCCccEE-EcCcch--hHHHHHHHccccCcEEEEEee
Q 027106          100 ALKRYFPDGIDIY-FDNVGA--EMQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus       100 ~~~~~~~~~~d~v-ld~~g~--~~~~~~~~~l~~~G~~v~~g~  139 (228)
                      .+....+..||+| +|..|+  +.++.++++++.+|-+....+
T Consensus       121 ~~~~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT  163 (375)
T d2dula1         121 RLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT  163 (375)
T ss_dssp             HHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhHhhcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence            2222233479975 798886  599999999998887776654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.09  E-value=0.085  Score=31.38  Aligned_cols=46  Identities=26%  Similarity=0.278  Sum_probs=36.1

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCc
Q 027106           40 EKVFVSAASGSVGHLV-GQYAKLFGCYVVGSAGSK-EKVTLLKDKLGFDD   87 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a-~~~a~~~g~~V~~~~~~~-~~~~~~~~~~g~~~   87 (228)
                      .+|-+.|- ||+|+.+ +++++..|+.|.+.+..+ +..+.++ +.|+.-
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i   49 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPI   49 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeE
Confidence            36788885 9999754 689999999999999765 4556677 899754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.07  E-value=0.11  Score=35.08  Aligned_cols=43  Identities=19%  Similarity=0.010  Sum_probs=36.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      +|-|+| .|.+|...+.-+...|.+|++.++++++.+.+. +.+.
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~   45 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA   45 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence            477889 699999988888888999999999999998887 4443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.02  E-value=0.025  Score=35.99  Aligned_cols=68  Identities=18%  Similarity=0.288  Sum_probs=47.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEE
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYF  113 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vl  113 (228)
                      .++++++|+|.|| |.+|.-++..++..|.+|.++.+++.-+       +  ..+   +. ...+.+++.... |+++..
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l-------~--~~~---~~-~~~~~~~~~l~~~GV~i~~   91 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLM-------S--RAA---PA-TLADFVARYHAAQGVDLRF   91 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT-------T--TTS---CH-HHHHHHHHHHHTTTCEEEE
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccc-------c--ccC---CH-HHHHHHHHHHHHCCcEEEe
Confidence            3678899999996 9999999999999999999999764211       0  001   11 444455544333 788877


Q ss_pred             cCc
Q 027106          114 DNV  116 (228)
Q Consensus       114 d~~  116 (228)
                      ++.
T Consensus        92 ~~~   94 (121)
T d1d7ya2          92 ERS   94 (121)
T ss_dssp             SCC
T ss_pred             CCE
Confidence            653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=95.02  E-value=0.016  Score=42.53  Aligned_cols=62  Identities=8%  Similarity=0.202  Sum_probs=38.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|||+||+|-+|..++..+...|. +++++....       .    ...|..+.+.+.+.+...   ++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~----~~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------c----ccCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            699999999999998887766664 555543321       1    112333332444444432   5899999886

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.99  E-value=0.17  Score=32.93  Aligned_cols=93  Identities=17%  Similarity=0.100  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCceee----ccChhhHHHHHHHHCCCCccEEE
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKVTLLKDKLGFDDAFN----YKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      .+|.|.||+|.+|..++.++...+.  +++.++.++.+.+-+. -........    .... +..+.++     +.|+|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~D-l~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV   73 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAAD-LSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV   73 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHH-HTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHH-HhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence            3789999889999999998888876  7888887766544332 222221111    1111 3333332     589999


Q ss_pred             cCcchh----------------HHHHH---HHccccCcEEEEEee
Q 027106          114 DNVGAE----------------MQEAA---IANMNTYGRVAVCGV  139 (228)
Q Consensus       114 d~~g~~----------------~~~~~---~~~l~~~G~~v~~g~  139 (228)
                      -++|.+                .+...   +....|++.++.+++
T Consensus        74 itag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          74 IPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            887721                12222   233367788888764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.85  E-value=0.017  Score=41.14  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      +.+++|+|+|| |+.|+.++..++..|.+|.+++.+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            56789999996 99999999999999999999986654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.78  E-value=0.12  Score=35.00  Aligned_cols=82  Identities=12%  Similarity=0.016  Sum_probs=49.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCcee----e---ccChhhHHHHHHHHCCCCccE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE--KVTLLKDKLGFDDAF----N---YKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~~~----~---~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      +|.|.|+ |.+|.+.+..+...|.+|....+..+  ..+.+. +-.....+    .   .....+..+.+.     ..|+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~ad~   74 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWPEQLEKCLE-----NAEV   74 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECGGGHHHHHT-----TCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccccccHHHHHh-----ccch
Confidence            6889995 99999999888888999999987433  333333 21110000    0   000113333332     4799


Q ss_pred             EEcCcchhHHHHHHHccc
Q 027106          112 YFDNVGAEMQEAAIANMN  129 (228)
Q Consensus       112 vld~~g~~~~~~~~~~l~  129 (228)
                      |+-++....+...++.+.
T Consensus        75 Ii~avps~~~~~~~~~l~   92 (180)
T d1txga2          75 VLLGVSTDGVLPVMSRIL   92 (180)
T ss_dssp             EEECSCGGGHHHHHHHHT
T ss_pred             hhcccchhhhHHHHHhhc
Confidence            999998765555555443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.72  E-value=0.018  Score=38.12  Aligned_cols=33  Identities=18%  Similarity=0.219  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      .|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            6899999996 99999999999999999998863

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=94.71  E-value=0.1  Score=36.77  Aligned_cols=90  Identities=16%  Similarity=0.186  Sum_probs=56.1

Q ss_pred             EEEEEcCCchHHH-HHHHHHHHc-CCEEEE-EeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           41 KVFVSAASGSVGH-LVGQYAKLF-GCYVVG-SAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        41 ~VlI~ga~g~~G~-~a~~~a~~~-g~~V~~-~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|.|+| +|.+|. ..+...+.. +.+|++ +++++++.+...+++|...  +..+++   +.+.+.   ...+|+|+-+
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---~~ell~---~~~iD~V~I~  107 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---FDKIAK---DPKIDAVYII  107 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---GGGGGG---CTTCCEEEEC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc---hhhhcc---cccceeeeec
Confidence            789999 498886 344443433 567775 5567888777766787642  223332   221121   2369999888


Q ss_pred             cch-hHHHHHHHccccCcEEEEEe
Q 027106          116 VGA-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~g~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +.. ...+.+..++..| +=+.+.
T Consensus       108 tp~~~H~~~~~~al~~g-k~v~~E  130 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKAG-KHVMCE  130 (221)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             cchhhhhhHHHHhhhcc-hhhhcC
Confidence            876 4777777888764 444444

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.66  E-value=0.23  Score=32.52  Aligned_cols=94  Identities=16%  Similarity=0.154  Sum_probs=53.4

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSA-ASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~g-a~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      -+|.+||=.+ |+|++|+   .. ...|+ +|+.++.+++..+.+++   .++...-+..-.. +....+.. ..+.||+
T Consensus        13 ~~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~-D~~~~l~~-~~~~fDi   86 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-EAERAIDC-LTGRFDL   86 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-CHHHHHHH-BCSCEEE
T ss_pred             CCCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc-cccccccc-cccccce
Confidence            4688888776 3444554   33 34677 99999999888776653   3455331211122 44444433 3447999


Q ss_pred             EEcCcc--hh----HHHHHH--HccccCcEEEE
Q 027106          112 YFDNVG--AE----MQEAAI--ANMNTYGRVAV  136 (228)
Q Consensus       112 vld~~g--~~----~~~~~~--~~l~~~G~~v~  136 (228)
                      ||---+  ..    .+..+.  +.|+++|.++.
T Consensus        87 If~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          87 VFLDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             EEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             eEechhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            874322  12    333332  35777787765

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.049  Score=39.55  Aligned_cols=49  Identities=10%  Similarity=-0.191  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      +..+|.++|-.|+ |+ |...+..+.....+|++++-++...+.+++.+..
T Consensus        51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~~   99 (263)
T d2g72a1          51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQE   99 (263)
T ss_dssp             SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred             CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHhc
Confidence            4567899999995 33 4433333444456999999999999998854543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.58  E-value=0.036  Score=35.83  Aligned_cols=39  Identities=15%  Similarity=0.043  Sum_probs=34.1

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ..++++++|+|.|| |.+|+-++..++..|.+|.++.+.+
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            34677899999996 9999999999999999999999764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.56  E-value=0.068  Score=32.34  Aligned_cols=51  Identities=14%  Similarity=0.098  Sum_probs=39.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCc
Q 027106           35 KPKKGEKVFVSAASGSVGHLV-GQYAKLFGCYVVGSAGSK-EKVTLLKDKLGFDD   87 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a-~~~a~~~g~~V~~~~~~~-~~~~~~~~~~g~~~   87 (228)
                      ..+..++|.+.|- ||+|+.+ +++++..|.+|.+.+... ...+.++ +.|...
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~v   56 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAKI   56 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCEE
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCeE
Confidence            3567789999995 9999776 899999999999999753 3445666 678753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.46  E-value=0.19  Score=34.65  Aligned_cols=72  Identities=17%  Similarity=0.155  Sum_probs=45.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCcc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      ..+++ .|++||-.|+  |.|..++. +...|+ +|++++.+++..+.+++......++..+    +    .+ .++.||
T Consensus        43 ~~~dl-~Gk~VLDlGc--GtG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D----~----~~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGT--GNGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD----V----SE-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETC--TTCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC----G----GG-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCC--CCcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe----h----hh-cCCcce
Confidence            44555 5999999984  33555444 444675 8999999999989888333322333222    1    11 235799


Q ss_pred             EEEcCc
Q 027106          111 IYFDNV  116 (228)
Q Consensus       111 ~vld~~  116 (228)
                      +|+.+-
T Consensus       110 ~Vi~NP  115 (197)
T d1ne2a_         110 TWIMNP  115 (197)
T ss_dssp             EEEECC
T ss_pred             EEEeCc
Confidence            998653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.45  E-value=0.034  Score=34.86  Aligned_cols=35  Identities=17%  Similarity=0.224  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .+++++|.|| |.+|+-+++.++.+|++|.++.+.+
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            3479999996 9999999999999999999998663

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.68  Score=34.80  Aligned_cols=54  Identities=28%  Similarity=0.313  Sum_probs=40.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFDD   87 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~~   87 (228)
                      +.+.+++++.|.... +|..|.+++..|+.+|.+.+++.   .++++.+.++ .+|++-
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~v  146 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEI  146 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEE
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeE
Confidence            446667777665555 69999999999999999655544   3667888888 899853

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.41  E-value=0.026  Score=41.88  Aligned_cols=38  Identities=18%  Similarity=0.109  Sum_probs=32.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .....++|+|+|| |..|+.++..+...|.+|.+++.++
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4456679999996 9999999988888899999999653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.37  E-value=0.25  Score=32.27  Aligned_cols=38  Identities=26%  Similarity=0.171  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEK   75 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~   75 (228)
                      ..+.+|.|+|+ |.+|..++..+...+.  +++.++.++++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            35678999996 9999998888877775  89999988765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.35  E-value=0.033  Score=37.68  Aligned_cols=95  Identities=16%  Similarity=0.061  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC------ceeecc--ChhhHHHHHHHHCCCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFD------DAFNYK--EETDLKAALKRYFPDG  108 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~------~~~~~~--~~~~~~~~~~~~~~~~  108 (228)
                      -.|++|+|.|-+.-+|.=++.++...|+.|+.+...... +.   ..+.+      ..-+..  ..+...+...+     
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~-----   97 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ-KF---TRGESLKLNKHHVEDLGEYSEDLLKKCSLD-----   97 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE-EE---ESCCCSSCCCCEEEEEEECCHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc-cc---ccccceeeeeeccccccccchhHHhhcccc-----
Confidence            478999999988889998888888899999877643211 10   01111      111111  11123333333     


Q ss_pred             ccEEEcCcchhHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .|+++.++|.+.+.---+++++|..++.+|..
T Consensus        98 aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          98 SDVVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             CCEEEEccCCCccccChhhcccCceEeecccc
Confidence            79999999876442233578888888888864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.32  E-value=0.03  Score=42.17  Aligned_cols=34  Identities=15%  Similarity=0.161  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      ..++|||+||+|-+|..++..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4468999999999999999999999999999874

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.042  Score=35.03  Aligned_cols=34  Identities=9%  Similarity=0.045  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .++|+|.|| |.+|+-++..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            479999996 9999999999999999999999764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.027  Score=42.36  Aligned_cols=34  Identities=18%  Similarity=0.305  Sum_probs=29.9

Q ss_pred             CEE-EEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           40 EKV-FVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        40 ~~V-lI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++| ||+||+|-+|..++..+...|.+|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            357 9999999999999998888999999999743

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.13  E-value=0.013  Score=40.39  Aligned_cols=90  Identities=12%  Similarity=0.011  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC----CceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLGF----DDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|.|.||||-+|+-+++++...- .++..+.++......+. +...    .........       ......+.|++|.+
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~Dvvf~a   78 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVAV-------KDADFSNVDAVFCC   78 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBCG-------GGCCGGGCSEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchhh-------hhhhhcccceeeec
Confidence            68999999999999999988654 47666654333222222 1111    110000100       00001268999999


Q ss_pred             cchhHHHHHHHccccCcEEEEEe
Q 027106          116 VGAEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~g~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      ++..........+...+..+...
T Consensus        79 lp~~~s~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          79 LPHGTTQEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             CSSSHHHHHHHTSCSSCEEEECS
T ss_pred             cccchHHHHHHHHHhcCcccccc
Confidence            99876666667788888877654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.13  E-value=0.045  Score=38.98  Aligned_cols=35  Identities=20%  Similarity=0.119  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      +...+|+|+|| |..|++++..+...|.+|.++++.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            45568999996 999999999999999999999964

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.12  E-value=0.084  Score=37.80  Aligned_cols=42  Identities=17%  Similarity=0.268  Sum_probs=34.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           30 LFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        30 l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      +.....--.|.+|+|.| .|.+|..+++++...|++|++++.+
T Consensus        22 ~~~~~~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          22 AKKLWGGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             HHHHHSCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             HHHcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            33333445899999999 5999999999999999999987743

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.06  Score=35.38  Aligned_cols=87  Identities=17%  Similarity=0.086  Sum_probs=49.0

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHc---CCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCccEEEc
Q 027106           41 KVFVSAASGSVGHLVGQY-AKLF---GCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGIDIYFD  114 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~-a~~~---g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vld  114 (228)
                      +|.|.||||-+|+-.+++ +.+.   -.+++...++........  ++...  +.+..+   .. .+     .++|++|-
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~--~~~~~~~~~~~~~---~~-~~-----~~~DivF~   71 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS--FGGTTGTLQDAFD---LE-AL-----KALDIIVT   71 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG--GGTCCCBCEETTC---HH-HH-----HTCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc--ccCCceeeecccc---hh-hh-----hcCcEEEE
Confidence            789999999999999975 4432   236776665533211111  11111  111111   11 11     15899999


Q ss_pred             CcchhHHHHHHHccccCc---EEEEEe
Q 027106          115 NVGAEMQEAAIANMNTYG---RVAVCG  138 (228)
Q Consensus       115 ~~g~~~~~~~~~~l~~~G---~~v~~g  138 (228)
                      |++.+.-......+...|   .++..+
T Consensus        72 a~~~~~s~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          72 CQGGDYTNEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             ecCchHHHHhhHHHHhcCCCeecccCC
Confidence            999876666666555544   355544

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.86  E-value=0.24  Score=33.16  Aligned_cols=99  Identities=15%  Similarity=0.137  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC--CHHHHHHHHHHhCCC-----ceeeccCh------hh----HHHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAG--SKEKVTLLKDKLGFD-----DAFNYKEE------TD----LKAALKR  103 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~--~~~~~~~~~~~~g~~-----~~~~~~~~------~~----~~~~~~~  103 (228)
                      +|.|.| -|-+|+++.+++...+.+|+++..  +.+...++. ++.-.     .-+...+.      ..    -.....+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            688998 699999999988888888887764  333444444 33211     00000000      00    0001122


Q ss_pred             HCCC--CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          104 YFPD--GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       104 ~~~~--~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ....  ++|+|+||+|. ...+.+...+..+.+=|.++.+.
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            2222  79999999996 46667777787777666665443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=93.85  E-value=0.1  Score=38.00  Aligned_cols=71  Identities=14%  Similarity=0.143  Sum_probs=42.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeC--CHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-CccEEEcCc
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGC-YVVGSAG--SKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GIDIYFDNV  116 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~~  116 (228)
                      |||+||+|=+|..++..+...|. +|++++.  +..+..... +.......+..   +....+.....- .+++++.++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhc
Confidence            89999999999999888888896 6888752  222333333 33333333222   333333332222 677777654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.79  E-value=0.12  Score=34.58  Aligned_cols=98  Identities=16%  Similarity=0.069  Sum_probs=67.5

Q ss_pred             hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      .-+||........|....---.|++|+|.|.+.-+|.-+..++...|++|+.+.....                     +
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~   73 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------N   73 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------C
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------h
Confidence            4556666666666644444458999999999888999999999999999988764321                     1


Q ss_pred             HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeeec
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ..+.+++     .|+++.++|.+.+-. -+.++++..++.+|...
T Consensus        74 l~~~~~~-----ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~~  112 (166)
T d1b0aa1          74 LRHHVEN-----ADLLIVAVGKPGFIP-GDWIKEGAIVIDVGINR  112 (166)
T ss_dssp             HHHHHHH-----CSEEEECSCCTTCBC-TTTSCTTCEEEECCCEE
T ss_pred             hHHHHhh-----hhHhhhhccCccccc-ccccCCCcEEEecCcee
Confidence            1122222     688888888642211 25778888888888753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.77  E-value=0.22  Score=37.79  Aligned_cols=32  Identities=19%  Similarity=0.152  Sum_probs=26.5

Q ss_pred             CCEEEEEcCCchHHHHHHH-HHHHcCCEEEEEe
Q 027106           39 GEKVFVSAASGSVGHLVGQ-YAKLFGCYVVGSA   70 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~-~a~~~g~~V~~~~   70 (228)
                      +-+|||+||+|-+|..++. +++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            4689999999999977765 5566789999986

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.59  E-value=0.022  Score=37.52  Aligned_cols=89  Identities=15%  Similarity=0.041  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG---CYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      -+|.|.||+|-+|+-+++++...+   .++..+.++....+.+.  +.... +...+.       ......+.|++|-++
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~-~~~~~~-------~~~~~~~~d~vf~a~   72 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESS-LRVGDV-------DSFDFSSVGLAFFAA   72 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEE-EECEEG-------GGCCGGGCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--ecccc-chhccc-------hhhhhccceEEEecC
Confidence            378999999999999999986433   37776664432221111  11111 111110       000112689999999


Q ss_pred             chhHHHHHH-HccccCcEEEEEe
Q 027106          117 GAEMQEAAI-ANMNTYGRVAVCG  138 (228)
Q Consensus       117 g~~~~~~~~-~~l~~~G~~v~~g  138 (228)
                      +...-.... .....+.+++..+
T Consensus        73 p~~~s~~~~~~~~~~g~~VID~S   95 (144)
T d2hjsa1          73 AAEVSRAHAERARAAGCSVIDLS   95 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CcchhhhhccccccCCceEEeec
Confidence            886444444 4445566666654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=93.56  E-value=0.0052  Score=41.53  Aligned_cols=92  Identities=18%  Similarity=0.180  Sum_probs=55.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh----CC--CceeeccChhhHHHHHHHHCCCCccEEE
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKL----GF--DDAFNYKEETDLKAALKRYFPDGIDIYF  113 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~----g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vl  113 (228)
                      +|.|+|++|=||.++++.+... +++++....++.....-+ ..    |.  ..+....+.       .. ....+|+++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~~~-------~~-~~~~~DViI   76 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQSSL-------DA-VKDDFDVFI   76 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEESCS-------TT-TTTSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeeccH-------HH-HhcccceEE
Confidence            7899999999999999988765 567765543322210000 11    11  001111111       00 112689999


Q ss_pred             cCcchhHHHHHHHccccCcEEEEEeeec
Q 027106          114 DNVGAEMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       114 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |++..+.....++.....|.=+.+|+.+
T Consensus        77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EeccHHHHHHHHHHHHhccceeEEecCC
Confidence            9999887777778777777777777644

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.47  E-value=0.032  Score=40.88  Aligned_cols=33  Identities=27%  Similarity=0.241  Sum_probs=29.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      .|+|.|| |+.|++++..++..|.+|.+++++++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5899996 99999999999999999999997653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.42  E-value=0.061  Score=34.03  Aligned_cols=37  Identities=11%  Similarity=0.031  Sum_probs=32.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++.+.+++|.|| |.+|+-+++.+...|.+|.++.+++
T Consensus        29 ~~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          29 IENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            345689999996 9999999999999999999998663

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.34  E-value=0.06  Score=36.03  Aligned_cols=35  Identities=29%  Similarity=0.296  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~   73 (228)
                      .|++|+|.|| |..|+.+++.++..+.  +|++++..+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4889999996 9999999888888774  888887554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.25  E-value=0.18  Score=36.01  Aligned_cols=32  Identities=19%  Similarity=0.238  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAG   71 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~   71 (228)
                      ..+|+|.|+ ||+|..++..+...|. +++.++.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            369999995 9999999999999998 8888774

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.25  E-value=1.1  Score=33.06  Aligned_cols=55  Identities=25%  Similarity=0.293  Sum_probs=41.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFDD   87 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~~   87 (228)
                      ..+.++.+...+|...+|..|.+++..++.+|.+.+++.   .++.+.+.++ .+|++-
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~v  114 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVEL  114 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcce
Confidence            446677777777777789999999999999998554443   3566777777 888753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.21  E-value=0.16  Score=31.58  Aligned_cols=35  Identities=9%  Similarity=0.062  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLF---GCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~---g~~V~~~~~~~   73 (228)
                      ..++++|.|| |.+|+-+++++..+   |.+|.++.+++
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            4579999996 99998887765544   77999988653

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.17  E-value=0.22  Score=36.47  Aligned_cols=101  Identities=15%  Similarity=0.185  Sum_probs=58.5

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      ....++|++||=.-| ++=|. +++++.... .+|++.+.++.|...+++   ++|...+..........   ....++.
T Consensus        97 ~L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~---~~~~~~~  171 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS---QWCGEQQ  171 (284)
T ss_dssp             HHCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH---HHHTTCC
T ss_pred             ccCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccc---hhccccc
Confidence            456899999987653 33333 334444443 589999999888766643   57775433222210111   1122347


Q ss_pred             ccEEE-c--Ccchh--------------------------HHHHHHHccccCcEEEEEe
Q 027106          109 IDIYF-D--NVGAE--------------------------MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       109 ~d~vl-d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  138 (228)
                      ||.|+ |  |+|..                          .+..+++.+++||++|-..
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsT  230 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  230 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            99875 4  55532                          2244566788888777643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.14  E-value=0.21  Score=31.64  Aligned_cols=91  Identities=11%  Similarity=0.016  Sum_probs=59.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcchh-
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGAE-  119 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-  119 (228)
                      .++|.|. |.+|..+++.++  +..|++++.++++.+.++ ..|...+. - +. .-.+.+++..-...+.++-++..+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~~i~-G-d~-~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGANFVH-G-DP-TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCEEEE-S-CT-TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCccccc-c-cc-CCHHHHHHhhhhcCcEEEEeccchh
Confidence            5889995 999988877664  446778888888888887 77764332 2 22 223344443323678888777654 


Q ss_pred             ---HHHHHHHccccCcEEEEEe
Q 027106          120 ---MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       120 ---~~~~~~~~l~~~G~~v~~g  138 (228)
                         ......+.+.|..+++...
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEEC
T ss_pred             hhHHHHHHHHHHCCCceEEEEE
Confidence               3444556777877776654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.06  E-value=0.54  Score=34.71  Aligned_cols=103  Identities=17%  Similarity=0.129  Sum_probs=59.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCc-eeeccChhhHHHHHHHHC--CC
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDK---LGFDD-AFNYKEETDLKAALKRYF--PD  107 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~--~~  107 (228)
                      .+..+|.+||=..+  +.|...+.+++ .|++|+.++.++...+.+++.   .|... -+..-.. |..+.+....  +.
T Consensus       128 ~~~~~~~rVLdlf~--~tG~~sl~aa~-~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~  203 (309)
T d2igta1         128 ETADRPLKVLNLFG--YTGVASLVAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGS  203 (309)
T ss_dssp             HHSSSCCEEEEETC--TTCHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTC
T ss_pred             hhccCCCeEEEecC--CCcHHHHHHHh-CCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCC
Confidence            34677889987652  23444444443 588999999999998888742   24421 1111111 3333333222  23


Q ss_pred             CccEEEc---Ccc----------hh----HHHHHHHccccCcEEEEEeee
Q 027106          108 GIDIYFD---NVG----------AE----MQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       108 ~~d~vld---~~g----------~~----~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .||+||-   +.+          ..    ....+..+++++|.++.+...
T Consensus       204 ~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~  253 (309)
T d2igta1         204 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY  253 (309)
T ss_dssp             CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred             CCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecC
Confidence            7999863   111          01    334566788999876665543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.00  E-value=0.22  Score=33.39  Aligned_cols=97  Identities=15%  Similarity=0.103  Sum_probs=66.6

Q ss_pred             hccchhHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhh
Q 027106           17 GILGFSGLTAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETD   96 (228)
Q Consensus        17 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   96 (228)
                      +-+||.....+..|.+..---.|++|.|.|.+.-+|.-++.++...|++|+.+........                   
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~-------------------   77 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------   77 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence            4567777666767744333358999999999899999999999999999999885432211                   


Q ss_pred             HHHHHHHHCCCCccEEEcCcchhHHHHHHHccccCcEEEEEeee
Q 027106           97 LKAALKRYFPDGIDIYFDNVGAEMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus        97 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                        +..+     ..|+++-++|.+.+-. -+.++++..++.+|..
T Consensus        78 --~~~~-----~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          78 --EEVN-----KGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             --HHHT-----TCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             --HHHh-----hccchhhccccccccc-cccccCCCeEeccCcc
Confidence              1111     2577777777642211 2577888888888754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.94  E-value=0.14  Score=36.84  Aligned_cols=42  Identities=17%  Similarity=0.141  Sum_probs=33.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      ++.....--+|.+|.|.| .|.+|..+++.+...|++|++++.
T Consensus        26 ~~~~~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             HHHHTTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHHhCCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            343333334789999999 599999999999999999998764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.069  Score=39.54  Aligned_cols=35  Identities=26%  Similarity=0.276  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ++..+|+|+|| |-.|+.++..+...|.+|.+...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45678999996 999999999999999999999865

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.84  E-value=0.28  Score=32.03  Aligned_cols=38  Identities=21%  Similarity=0.163  Sum_probs=29.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLL   79 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~   79 (228)
                      +|-|+| .|-+|...+.-++..|.+|++..+.+.+....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            578888 69999999988888899999888665444333

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.76  E-value=0.07  Score=39.78  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      .++|+|+|| |..|+.++..+...|.+|.+++.++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            578999996 9999999988888899999999664

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.75  E-value=0.061  Score=38.75  Aligned_cols=32  Identities=19%  Similarity=0.127  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK   73 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~   73 (228)
                      .|+|+|| |..|++++..++..|. +|.++++++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            6899996 9999999999999996 888888653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.72  E-value=0.16  Score=33.37  Aligned_cols=46  Identities=20%  Similarity=0.138  Sum_probs=38.3

Q ss_pred             HHHHHHHHhcCCCCCCEEEEE--cCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           25 TAYAGLFEIGKPKKGEKVFVS--AASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        25 ta~~~l~~~~~~~~g~~VlI~--ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |...++  ..+..++..|+|+  | .|-+|+-+++.+...|++|.++++.+
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CHHHHh--cCccccCCceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCC
Confidence            667776  3667888898887  5 38899999999999999999999764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=92.63  E-value=0.025  Score=38.77  Aligned_cols=35  Identities=23%  Similarity=0.247  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      ++..|+|+|| |+.|+.++..+...|.+|+++.+.+
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4568999996 9999999999999999999998543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.59  E-value=0.38  Score=32.43  Aligned_cols=88  Identities=13%  Similarity=0.063  Sum_probs=50.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC----CCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGSKEKVTLLKDKLG----FDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +|.|.||||-+|.-+++++...- .++..+.++....+.+. +..    ....+...   +..+...     ..|++|-+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~-~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a   73 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLE-EIFPSTLENSILSEF---DPEKVSK-----NCDVLFTA   73 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHH-HHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccc-ccCchhhcccccccc---CHhHhcc-----ccceEEEc
Confidence            68999999999999998887654 47776664433222222 211    11112222   2111111     37999999


Q ss_pred             cchhHHHHHHHccccCcEEEEEe
Q 027106          116 VGAEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       116 ~g~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      .+........... .+-+++..+
T Consensus        74 ~p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          74 LPAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             CSTTHHHHHHTTC-CSCEEEESS
T ss_pred             cccHHHHHHHHhh-ccceEEecC
Confidence            9876544544443 455666654

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=92.56  E-value=0.94  Score=30.53  Aligned_cols=105  Identities=23%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCc--eeeccChhhHHHHHHHHCCCCc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDD--AFNYKEETDLKAALKRYFPDGI  109 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~  109 (228)
                      ....+++|..+ |.+..|+=|+.. .++. .+.+|+++++.++..+.++ +.-...  ++..... ++.+.+.....+.+
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~-~~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~v   86 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGHAR-GILE-RGGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERV   86 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHHHH-HHHH-TTCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCE
T ss_pred             HhcCCCCCCEE-EEeCCCCcHHHH-HHhc-ccCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCcc
Confidence            33467888874 555455556543 4444 3679999999999988887 543322  2333332 56555555444478


Q ss_pred             cEEEcCcch-h---------------HHHHHHHccccCcEEEEEeeec
Q 027106          110 DIYFDNVGA-E---------------MQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       110 d~vld~~g~-~---------------~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |.|+=-.|- .               .+....+.++++|+++.+...+
T Consensus        87 dgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs  134 (182)
T d1wg8a2          87 DGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS  134 (182)
T ss_dssp             EEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred             CEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc
Confidence            876532221 1               4667788999999999876543

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=92.39  E-value=0.065  Score=36.15  Aligned_cols=30  Identities=17%  Similarity=0.186  Sum_probs=26.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |+.|+.++..+...|.+|.++++.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            789996 999999999999999999998853

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=92.35  E-value=0.05  Score=40.26  Aligned_cols=33  Identities=18%  Similarity=0.247  Sum_probs=28.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ++|||+||+|-+|..++..+...|..++++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            589999999999999999988889988877643

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=92.31  E-value=0.46  Score=32.79  Aligned_cols=93  Identities=17%  Similarity=0.190  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCce--eeccChhhHHHHHHHHCC-CCccE
Q 027106           39 GEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDA--FNYKEETDLKAALKRYFP-DGIDI  111 (228)
Q Consensus        39 g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~--~~~~~~~~~~~~~~~~~~-~~~d~  111 (228)
                      +..||=+|  .|.|..++.+|+.. ...+++++.++.....+.+   +.+...+  +..+.. ++    .+..+ +.+|.
T Consensus        32 ~plvLdIG--cG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~-~l----~~~~~~~~~~~  104 (204)
T d1yzha1          32 NPIHVEVG--SGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DL----TDYFEDGEIDR  104 (204)
T ss_dssp             CCEEEEES--CTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CG----GGTSCTTCCSE
T ss_pred             CCeEEEEe--ccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH-HH----hhhccCCceeh
Confidence            34677777  77899999999987 5699999999887666542   4565443  222111 22    22223 36787


Q ss_pred             EEcCcc---------------hhHHHHHHHccccCcEEEEEe
Q 027106          112 YFDNVG---------------AEMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       112 vld~~g---------------~~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+-...               .+.++.+.+.|++||.+....
T Consensus       105 i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~T  146 (204)
T d1yzha1         105 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  146 (204)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            765433               246788899999999997754

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.26  E-value=0.066  Score=37.31  Aligned_cols=30  Identities=17%  Similarity=0.150  Sum_probs=26.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |+.|+.++..+...|.+|++++..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678896 999999999999999999999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=92.24  E-value=0.065  Score=38.41  Aligned_cols=32  Identities=19%  Similarity=0.195  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      |+|+|| |+.|++++..+...|.+|.++++++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            788996 99999999888888999999997754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=92.02  E-value=0.072  Score=37.88  Aligned_cols=31  Identities=23%  Similarity=0.160  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|| |+.|++++..+...|.+|+++++++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788996 9999998888888899999999764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=92.01  E-value=0.27  Score=32.92  Aligned_cols=98  Identities=18%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCc-----eeeccChhhH-----------HHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---SKEKVTLLKDKLGFDD-----AFNYKEETDL-----------KAAL  101 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~~-----~~~~~~~~~~-----------~~~~  101 (228)
                      +|.|.| -|-+|+++.+.+...+.+|+++..   +.+...++. ++--.+     -+...+. .+           ....
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~-~l~ing~~I~~~~~~~p   78 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDG-ALVVDGKKITVFNEMKP   78 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETT-EEEETTEEEEEECCSSG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCC-EEEECCEEEEEEecCCh
Confidence            578988 699999999988888888877764   345566665 432110     0000000 00           0011


Q ss_pred             HHHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          102 KRYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       102 ~~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .++.. . ++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        79 ~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          79 ENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HHCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            12221 2 79999999997 57777888888888777776544

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.78  E-value=0.072  Score=37.83  Aligned_cols=32  Identities=19%  Similarity=0.160  Sum_probs=27.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSK   73 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~   73 (228)
                      +|+|+|| |..|+.++..++..|. +|+++++++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5899996 9999999998888997 699998653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.76  E-value=0.24  Score=30.83  Aligned_cols=35  Identities=9%  Similarity=0.029  Sum_probs=27.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFG---CYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g---~~V~~~~~~   72 (228)
                      +.+++++|.|| |.+|.-++..+..++   .+|+++.+.
T Consensus        18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            44679999996 999988887777665   479888865

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.72  E-value=0.058  Score=37.25  Aligned_cols=30  Identities=10%  Similarity=-0.175  Sum_probs=23.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      .++.+++.| .|++|++++|+++.+|+..++
T Consensus       162 ~~~~~~i~g-~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         162 FDQLVKFYA-FDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             GGGGEEEEE-GGGHHHHHHHHHHTSCSEEEE
T ss_pred             cccEEEEeC-cHHHHHHHHHHHHHcCCCEEE
Confidence            355666666 699999999999999995443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.65  E-value=1.1  Score=29.77  Aligned_cols=73  Identities=15%  Similarity=0.142  Sum_probs=41.5

Q ss_pred             CCCEEEEEcCCchHHH--HHHHHHHHc-C---CEEEEEeCCHHHHHHHH-------HHhCCCceeeccChhhHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGH--LVGQYAKLF-G---CYVVGSAGSKEKVTLLK-------DKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~--~a~~~a~~~-g---~~V~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      +.-+|.|.|| |++|.  +...+++.. .   .+++.++.++++++...       ...+....+....  +..+.+   
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal---   75 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAF---   75 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHH---
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--Chhhcc---
Confidence            4557899997 76663  333444432 2   38999999888865321       1234432222221  333333   


Q ss_pred             CCCCccEEEcCcch
Q 027106          105 FPDGIDIYFDNVGA  118 (228)
Q Consensus       105 ~~~~~d~vld~~g~  118 (228)
                        .+.|+|+.++|.
T Consensus        76 --~~AD~Vvitag~   87 (167)
T d1u8xx1          76 --TDVDFVMAHIRV   87 (167)
T ss_dssp             --SSCSEEEECCCT
T ss_pred             --CCCCEEEECCCc
Confidence              258999999874

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=91.61  E-value=0.37  Score=36.16  Aligned_cols=94  Identities=13%  Similarity=0.067  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCC---ceeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAK-LFGC-YVVGSAGSKEKVTLLKDKLGFD---DAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~-~~g~-~V~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      +...++.|+| +|..+...++... ..+. +|.+.++++++.+.+.+++...   .+....   +..+.++     +.|+
T Consensus       126 ~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~---s~~eav~-----~ADI  196 (340)
T d1x7da_         126 PNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS---SVAEAVK-----GVDI  196 (340)
T ss_dssp             TTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS---SHHHHHT-----TCSE
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC---CHHHHHh-----cCCc
Confidence            4457899999 5999988776554 5566 8999999988776555455431   121122   4444443     4799


Q ss_pred             EEcCcch----hHHHHHHHccccCcEEEEEeeec
Q 027106          112 YFDNVGA----EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       112 vld~~g~----~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |+-|+..    +.+.  .++++|+-++..+|...
T Consensus       197 i~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         197 ITTVTADKAYATIIT--PDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EEECCCCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred             eeeccccCCCCcccc--hhhcCCCCEEeecccch
Confidence            9876643    2332  25789999999998754

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.39  E-value=0.22  Score=37.12  Aligned_cols=91  Identities=8%  Similarity=0.028  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHh---CCCceeeccChhhHHHHHHHHCCCCccE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKL-FGC-YVVGSAGSKEKVTLLKDKL---GFDDAFNYKEETDLKAALKRYFPDGIDI  111 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~-~g~-~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~  111 (228)
                      +...++.|+| +|..+...++.... ... +|.++.+++++.+...+++   +.....+  .    .+.+     .+.|+
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~----~~a~-----~~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--P----AEEA-----SRCDV  190 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--C----HHHH-----TSSSE
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--h----hhhh-----ccccE
Confidence            3446889999 59999887776664 455 8999999988776554333   3222211  1    1122     24899


Q ss_pred             EEcCcch--hHHHHHHHccccCcEEEEEeeec
Q 027106          112 YFDNVGA--EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       112 vld~~g~--~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      |+.|+.+  +.+.  .+.+++|-++..+|...
T Consensus       191 V~taT~s~~P~~~--~~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         191 LVTTTPSRKPVVK--AEWVEEGTHINAIGADG  220 (320)
T ss_dssp             EEECCCCSSCCBC--GGGCCTTCEEEECSCCS
T ss_pred             EEEeccCcccccc--hhhcCCCCeEeecCCcc
Confidence            9998876  3443  25789999999998755

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.37  E-value=0.14  Score=37.65  Aligned_cols=34  Identities=24%  Similarity=0.260  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      -+|.+|+|.| .|.+|..+++.+...|++|++++.
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            3688999999 599999999999999999998773

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=91.34  E-value=0.85  Score=30.37  Aligned_cols=99  Identities=17%  Similarity=0.144  Sum_probs=60.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHHHHhCCCc------e------eeccChh-h--HHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAG---SKEKVTLLKDKLGFDD------A------FNYKEET-D--LKAAL  101 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~---~~~~~~~~~~~~g~~~------~------~~~~~~~-~--~~~~~  101 (228)
                      +|.|.| -|-+|+++.+.+.... .+++++..   +.+...++. ++-..+      +      +...... .  -....
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p   80 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence            688999 6999999998777554 58877754   345566665 432110      0      0000000 0  00012


Q ss_pred             HHHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          102 KRYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       102 ~~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+... . ++|+|+||+|. ...+.+...+..|.+-|.++.+.
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            22232 3 89999999997 56667778888888777776554

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.33  E-value=0.073  Score=38.57  Aligned_cols=31  Identities=26%  Similarity=0.159  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      +|+|+|| |..|+.++..+...|.+|++++.+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            5899996 999999999998899999999865

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.09  E-value=0.082  Score=35.59  Aligned_cols=31  Identities=16%  Similarity=0.047  Sum_probs=26.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGS   69 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~   69 (228)
                      ++++|+|.|| |.+|+-++..++..|.++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            5789999996 999999999999998855444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.07  E-value=0.27  Score=33.83  Aligned_cols=39  Identities=23%  Similarity=0.327  Sum_probs=34.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      +|.|+| .|-+|+.++..+...|.+|++++.++++.+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            588999 599999988888888999999999998888775

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=91.01  E-value=0.1  Score=34.20  Aligned_cols=89  Identities=18%  Similarity=0.087  Sum_probs=48.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-c---CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           41 KVFVSAASGSVGHLVGQYAKL-F---GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~-~---g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      +|.|.||||-+|.-+++++.. .   ..++..++++...... - .++.......... +. +.+     ..+|++|-|+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            689999999999999986543 2   3466665544221111 1 1222111111111 11 111     2589999999


Q ss_pred             chhHHHHHHHccccCc---EEEEEe
Q 027106          117 GAEMQEAAIANMNTYG---RVAVCG  138 (228)
Q Consensus       117 g~~~~~~~~~~l~~~G---~~v~~g  138 (228)
                      +...-....+.+...|   .++..+
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlS   97 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAA   97 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCC
Confidence            9875555555555444   366554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=0.12  Score=35.86  Aligned_cols=30  Identities=17%  Similarity=0.089  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |+.|+.++..|..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            688896 999999999999999999999864

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=90.84  E-value=0.49  Score=31.46  Aligned_cols=100  Identities=18%  Similarity=0.184  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHh----CC-CceeeccCh------hh----HHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFG-CYVVGSAGS--KEKVTLLKDKL----GF-DDAFNYKEE------TD----LKAALK  102 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g-~~V~~~~~~--~~~~~~~~~~~----g~-~~~~~~~~~------~~----~~~~~~  102 (228)
                      +|.|.| -|-+|+++.+.+.... .+|+++...  .+...++. ++    |. ..-+...+.      ..    -.....
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~   80 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH
Confidence            678988 6999999998877664 478777753  33444444 32    21 000000000      00    000111


Q ss_pred             HHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeecc
Q 027106          103 RYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVISE  142 (228)
Q Consensus       103 ~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  142 (228)
                      ++.. . ++|+|+||+|- .....+...+..|.+-|.++.+..
T Consensus        81 ~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             HCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence            2222 2 79999999996 566677788888877777776543

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.82  E-value=0.42  Score=32.10  Aligned_cols=99  Identities=10%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHHhCCCc-----eeeccCh------hh----HHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF----GCYVVGSAG--SKEKVTLLKDKLGFDD-----AFNYKEE------TD----LKA   99 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~----g~~V~~~~~--~~~~~~~~~~~~g~~~-----~~~~~~~------~~----~~~   99 (228)
                      +|.|.| -|-+|+++.+.+...    ..+|+++..  +.+...++. ++.-.+     -+...+.      ..    -..
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            688999 699999999876543    236776663  444455554 332100     0000000      00    000


Q ss_pred             HHHHHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          100 ALKRYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       100 ~~~~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+.++.. . ++|+|+||+|- .....+...|..|.+-|+++.+.
T Consensus        81 ~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            1222222 3 89999999996 56677778888888888877654

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.74  E-value=1  Score=33.24  Aligned_cols=100  Identities=18%  Similarity=0.209  Sum_probs=60.2

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCC
Q 027106           33 IGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPD  107 (228)
Q Consensus        33 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
                      ..++++|++||=.-| ++ |--+.+++..++  ..+++.+.++.|...+++   ++|...++..... ...  + ....+
T Consensus       111 ~l~~~~g~~vlD~CA-ap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d-~~~--~-~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAA-AP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS-SLH--I-GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCS-SC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC-GGG--G-GGGCC
T ss_pred             cccCCccceeeeccc-ch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccc-ccc--c-ccccc
Confidence            456899999877653 22 333455666554  379999999998877642   5777665444332 110  1 11233


Q ss_pred             CccEEE-c--Ccchh--------------------------HHHHHHHccccCcEEEEEe
Q 027106          108 GIDIYF-D--NVGAE--------------------------MQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       108 ~~d~vl-d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  138 (228)
                      .||.|+ |  |+|..                          .+..+++.+++||++|-..
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsT  244 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  244 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEee
Confidence            688875 3  44421                          2245677888888766543

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.67  E-value=0.13  Score=35.86  Aligned_cols=31  Identities=19%  Similarity=0.237  Sum_probs=27.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      -++|+|| |+.|+.++..|..+|.+|.++...
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            3678895 999999999999999999999854

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.53  E-value=0.26  Score=32.35  Aligned_cols=35  Identities=20%  Similarity=0.040  Sum_probs=28.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~   72 (228)
                      .-+++|+|+|| |.+|.-++..+...|+ .|+++.+.
T Consensus        43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            45778999996 9999988888888898 67777754

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.47  E-value=0.16  Score=35.21  Aligned_cols=30  Identities=23%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |+.|+.++..|...|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            677795 999999999999999999999754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.47  E-value=0.11  Score=38.40  Aligned_cols=33  Identities=21%  Similarity=0.123  Sum_probs=28.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      .|+|+|| |..|++++..++..|.+|.+++..++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            5899996 99999999999999999999987543

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=90.45  E-value=1.1  Score=31.49  Aligned_cols=93  Identities=14%  Similarity=0.031  Sum_probs=56.6

Q ss_pred             CEEEEEcCCch----HHHHHHHHHHHc--CCEEEE-EeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           40 EKVFVSAASGS----VGHLVGQYAKLF--GCYVVG-SAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        40 ~~VlI~ga~g~----~G~~a~~~a~~~--g~~V~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      =+|.|+|. |.    ++...+...+..  +.++++ .+++.++.+.+.++++......++   ++.+.+.   ...+|+|
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~---~~~iD~V   89 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQ---YKDIDMI   89 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHH---CTTCSEE
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhccc---cccccee
Confidence            47899995 54    334444444443  458885 556677766665588875543343   3333332   2369999


Q ss_pred             EcCcch-hHHHHHHHccccC-----cEEEEEee
Q 027106          113 FDNVGA-EMQEAAIANMNTY-----GRVAVCGV  139 (228)
Q Consensus       113 ld~~g~-~~~~~~~~~l~~~-----G~~v~~g~  139 (228)
                      +.|+.. ...+.+..+|..|     ++=|.+.-
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            999887 4667677777654     45566653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.38  E-value=0.74  Score=29.00  Aligned_cols=60  Identities=15%  Similarity=0.194  Sum_probs=44.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCceeecc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKDKLGFDDAFNYK   92 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (228)
                      ...+++.-+.+++.-..-..-+.++++++.+|. ++++...+++..+.++ ++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            456777777666654344466778888898887 7888787878878888 99998887654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.31  E-value=0.49  Score=33.42  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=32.0

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHH-HHcCCEEEEEeC
Q 027106           29 GLFEIGKPKKGEKVFVSAASGSVGHLVGQYA-KLFGCYVVGSAG   71 (228)
Q Consensus        29 ~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a-~~~g~~V~~~~~   71 (228)
                      ++.....--+|.+|.|.| .|.+|..+++.+ +..|++|++++.
T Consensus        21 ~~~~~~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          21 AMDVLGIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             HHHHTTCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHcCCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            343434345789999999 699999999876 568999988763

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.27  E-value=0.15  Score=35.80  Aligned_cols=31  Identities=26%  Similarity=0.035  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|+ |+.|+.++..+...|.+|.+++..+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            678896 9999999999999999999998643

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.20  E-value=1.3  Score=27.81  Aligned_cols=35  Identities=29%  Similarity=0.408  Sum_probs=31.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA   70 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~   70 (228)
                      +.+..+|++.|-+|..|....+.++.+|-+|++-+
T Consensus        12 i~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGV   46 (130)
T d1euca1          12 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT   46 (130)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             EcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEee
Confidence            56778999999999999999999999999888655

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.08  E-value=0.14  Score=35.76  Aligned_cols=31  Identities=16%  Similarity=0.139  Sum_probs=26.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|| |..|+.++..+...|.+|.++++++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788895 9999998888888899999999764

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.00  E-value=0.16  Score=35.46  Aligned_cols=30  Identities=17%  Similarity=0.205  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|+ |+.|+.++..|...|.+|.+++..
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678895 999999988888899999999864

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.80  E-value=0.17  Score=34.49  Aligned_cols=32  Identities=16%  Similarity=0.161  Sum_probs=27.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ..|+|+|| |+.|+.++..+...|.++++++..
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            57999996 999999998888899999888743

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.66  E-value=0.16  Score=36.50  Aligned_cols=31  Identities=13%  Similarity=0.088  Sum_probs=26.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|| |.+|++++..+...|.+|+++++.+
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889996 9999998888888899999999753

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=89.57  E-value=0.13  Score=38.36  Aligned_cols=31  Identities=16%  Similarity=0.100  Sum_probs=25.0

Q ss_pred             EEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAK-----LFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~-----~~g~~V~~~~~~~   73 (228)
                      |+|.|| |..|++++.++.     ..|.+|+++++++
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            789996 999998887763     4688999998653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.35  E-value=1.8  Score=28.15  Aligned_cols=85  Identities=9%  Similarity=0.022  Sum_probs=53.1

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           41 KVFVSAASGSVGHL-VGQYAKLF-GCYVVGSA-GSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        41 ~VlI~ga~g~~G~~-a~~~a~~~-g~~V~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      +|.|.| +|.+|.- .+...+.. +.++++++ +++++.+.+.++++... ++     ++.+.+     ..+|+|+-|+.
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~-----~~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD-----SLSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS-----SHHHHH-----TTCSEEEECSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc-----cchhhh-----hhccccccccc
Confidence            688999 5999964 56655544 56777554 55666665554787643 22     221112     24899988887


Q ss_pred             h-hHHHHHHHccccCcEEEEEe
Q 027106          118 A-EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       118 ~-~~~~~~~~~l~~~G~~v~~g  138 (228)
                      . ...+.+..++..| +=|.+.
T Consensus        71 ~~~h~~~~~~al~~g-k~V~~E   91 (164)
T d1tlta1          71 TASHFDVVSTLLNAG-VHVCVD   91 (164)
T ss_dssp             TTHHHHHHHHHHHTT-CEEEEE
T ss_pred             chhcccccccccccc-ceeecc
Confidence            6 4777777777765 445554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.34  E-value=0.14  Score=38.33  Aligned_cols=31  Identities=16%  Similarity=0.132  Sum_probs=25.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEe
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSA   70 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~   70 (228)
                      .+|||+||+|-+|..++..+...|.  +|++.+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            5899999999999999888877776  455554

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=89.25  E-value=0.17  Score=37.07  Aligned_cols=30  Identities=23%  Similarity=0.179  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|+ |..|+.++.-|...|++|++++..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            789995 999999998888899999999864

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.18  E-value=0.18  Score=37.53  Aligned_cols=33  Identities=15%  Similarity=0.007  Sum_probs=26.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSK   73 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~   73 (228)
                      ++|+|+|| |..|++++..++..|  .+|++.++++
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            58999996 999998886665555  4999999764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.11  E-value=0.15  Score=37.59  Aligned_cols=32  Identities=13%  Similarity=0.125  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      -|+|+|| |..|+.++..+...|.+|.+++.++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4789996 9999999998888899999999654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.90  E-value=0.2  Score=34.68  Aligned_cols=29  Identities=21%  Similarity=0.143  Sum_probs=25.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      |+|+|| |+-|+.++..|...|.+|.+++.
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~   34 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEK   34 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEec
Confidence            677796 99999999999999999999985

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.78  E-value=0.25  Score=34.11  Aligned_cols=30  Identities=20%  Similarity=0.161  Sum_probs=26.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|+ |+.|+.++..|...|.+|.+++..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577795 999999999999999999999753

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.77  E-value=0.25  Score=34.50  Aligned_cols=35  Identities=14%  Similarity=-0.001  Sum_probs=27.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKL--FGCYVVGSAGSKEK   75 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~--~g~~V~~~~~~~~~   75 (228)
                      .+|.|+|| |+.|+.++..++.  .|.+|++++..+.-
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~~   38 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLVP   38 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            38999996 9999999876554  47799999876543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.63  E-value=0.43  Score=31.29  Aligned_cols=39  Identities=23%  Similarity=0.170  Sum_probs=31.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK   75 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~   75 (228)
                      .++..+|.|.|+ |.+|..++.++...+. +++.++.++++
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            356789999996 9999888887777775 89888876543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.50  E-value=0.21  Score=37.69  Aligned_cols=30  Identities=20%  Similarity=0.193  Sum_probs=25.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-EEEEe
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCY-VVGSA   70 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~-V~~~~   70 (228)
                      +|||+||+|-+|..++..+...|.+ |++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            6999999999999999888888885 55555

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.22  Score=36.81  Aligned_cols=31  Identities=23%  Similarity=0.168  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|| |..|+.++..++..|.+|++++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788996 9999999988888999999998643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.36  E-value=0.94  Score=29.98  Aligned_cols=82  Identities=15%  Similarity=0.202  Sum_probs=52.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcch-
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVGA-  118 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~-  118 (228)
                      +|.|+| .|.+|...+...+.. +.+++++......      ......+..+.+. .      .. ...+|+|+.|++. 
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~~-~------~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVADV-D------KH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGGG-G------GT-TTTCSEEEECSCTT
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchhh-h------hh-ccccceEEEeCCCc
Confidence            689999 599998887777764 4577765533221      1111222222221 1      11 1258999999987 


Q ss_pred             hHHHHHHHccccCcEEEEE
Q 027106          119 EMQEAAIANMNTYGRVAVC  137 (228)
Q Consensus       119 ~~~~~~~~~l~~~G~~v~~  137 (228)
                      ...+.+.++|+.|-.++..
T Consensus        70 ~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             THHHHHHHHHTTTSEEECC
T ss_pred             ccHHHHHHHHHCCCcEEEe
Confidence            5888888999998887754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.31  E-value=0.53  Score=32.00  Aligned_cols=38  Identities=26%  Similarity=0.183  Sum_probs=32.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~   80 (228)
                      +|.|+| .|-+|+..+..+ +.|.+|++++.++++.+.++
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            688898 699999877655 56999999999999888776

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=88.22  E-value=1.5  Score=30.10  Aligned_cols=92  Identities=12%  Similarity=0.099  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCc--eeeccChhhHHHHHHHHCCC-Cc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDD--AFNYKEETDLKAALKRYFPD-GI  109 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~~~~~~~~-~~  109 (228)
                      -++++++=.|  +|-|.=.+-+|-.. ..+++.++++..+...+++   ++|.+.  +++.+.. +       .... .|
T Consensus        64 ~~~~~ilDiG--sGaG~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E-~-------~~~~~~f  133 (207)
T d1jsxa_          64 LQGERFIDVG--TGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE-E-------FPSEPPF  133 (207)
T ss_dssp             CCSSEEEEET--CTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT-T-------SCCCSCE
T ss_pred             hcCCceeeee--ccCCceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchh-h-------hcccccc
Confidence            3567898888  33444444444443 4699999999998877753   577654  3333322 2       1223 69


Q ss_pred             cEEEc-Ccch--hHHHHHHHccccCcEEEEEe
Q 027106          110 DIYFD-NVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       110 d~vld-~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      |+|.. +++.  ..+..+...++++|+++.+-
T Consensus       134 D~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         134 DGVISRAFASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             EEEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ceehhhhhcCHHHHHHHHHHhcCCCcEEEEEC
Confidence            98885 4554  37777788999999999974

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.15  E-value=3.4  Score=29.75  Aligned_cols=53  Identities=26%  Similarity=0.279  Sum_probs=36.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCC
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFD   86 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~   86 (228)
                      +.+.+++|.+|...+ +|.-|.+++-.++.+|.+++++.   .++.+...++ .+|++
T Consensus        54 ~~g~~~~~~~vv~as-sGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~ga~  109 (302)
T d1fcja_          54 KRGVLKPGVELVEPT-NGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLK-ALGAN  109 (302)
T ss_dssp             HHTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             HcCCCCCCceEEEec-cccchhHHHHHHHHhccCCceEEeecCcHHHHHHHH-Hhccc
Confidence            446677777765544 79999999999999998544333   3556666666 77763

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.12  E-value=1  Score=29.04  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=24.8

Q ss_pred             EEEEEcCCchHHHHHHHHHH-HcC--CEEEEEeCCHH
Q 027106           41 KVFVSAASGSVGHLVGQYAK-LFG--CYVVGSAGSKE   74 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~-~~g--~~V~~~~~~~~   74 (228)
                      +|.|+|++|.+|..++.++. ..+  .++...+..+.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~   38 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV   38 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc
Confidence            68899988999987776543 434  48888886543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.06  E-value=0.67  Score=30.46  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLG   84 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g   84 (228)
                      +|++|.|.+.+||.|.+++..+...|.++--.  +++..+.+++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~t~~~L~~~lp   46 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEKTIEELRSFLP   46 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHHHHHHHHHHSC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHHHHHHHHHhCC
Confidence            58999999989999999999999999776444  5777777773343

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.05  E-value=0.2  Score=35.05  Aligned_cols=29  Identities=21%  Similarity=0.114  Sum_probs=26.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAG   71 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~   71 (228)
                      |+|+|| |+.|+.++..|...|.+|.+++.
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            678895 99999999999999999999984

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.02  E-value=2.4  Score=27.99  Aligned_cols=99  Identities=14%  Similarity=0.091  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHhCCCc-----eeeccCh------hh----HHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAG---SKEKVTLLKDKLGFDD-----AFNYKEE------TD----LKAAL  101 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~---~~~~~~~~~~~~g~~~-----~~~~~~~------~~----~~~~~  101 (228)
                      +|.|.| -|-+|+++.+.+... ..+|+++..   +.+...++. ++.-.+     -+...+.      ..    -....
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p   79 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP   79 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence            578888 699999999887755 347777753   345666665 432110     0000000      00    00001


Q ss_pred             HHHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          102 KRYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       102 ~~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      .+... . ++|+|+||+|. ...+.+...+..|.+-|.++.+.
T Consensus        80 ~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 SQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HHccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            11111 2 79999999997 46666777888887777776554

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.87  E-value=1.6  Score=33.11  Aligned_cols=53  Identities=23%  Similarity=0.214  Sum_probs=38.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCce
Q 027106           34 GKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---SKEKVTLLKDKLGFDDA   88 (228)
Q Consensus        34 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~~~   88 (228)
                      .++++|++| |...+|..|.+++..|+.+|.+++++..   ++.+.+.++ .+|++-+
T Consensus       139 ~~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeVi  194 (382)
T d1wkva1         139 RRVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQVI  194 (382)
T ss_dssp             TTSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred             hccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCccee
Confidence            457788764 4455799999999999999996655543   556777777 8887543

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=87.85  E-value=0.41  Score=32.33  Aligned_cols=93  Identities=17%  Similarity=0.020  Sum_probs=52.1

Q ss_pred             CCCEEE-EEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCc--eeeccChhhHHHHHHHHCCC-Cc
Q 027106           38 KGEKVF-VSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDD--AFNYKEETDLKAALKRYFPD-GI  109 (228)
Q Consensus        38 ~g~~Vl-I~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~~~~~~~~-~~  109 (228)
                      .|.+|| +++|+|++|+-|+    +.|+ .|+.++.+......+++   .++...  ......  +....+...... .|
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~~--d~~~~l~~~~~~~~f  116 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQ--SSLDFLKQPQNQPHF  116 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECS--CHHHHTTSCCSSCCE
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhcccccccccccc--cccccccccccCCcc
Confidence            444554 4566888888544    6788 99999999988777663   355422  221221  333344433333 69


Q ss_pred             cEEEcCcc--h----hHHHHHH--HccccCcEEEE
Q 027106          110 DIYFDNVG--A----EMQEAAI--ANMNTYGRVAV  136 (228)
Q Consensus       110 d~vld~~g--~----~~~~~~~--~~l~~~G~~v~  136 (228)
                      |+||---+  .    ..+..+.  .+++++|.++.
T Consensus       117 DlIFlDPPY~~~~~~~~l~~l~~~~~L~~~~liii  151 (183)
T d2ifta1         117 DVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYV  151 (183)
T ss_dssp             EEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cEEEechhHhhhhHHHHHHHHHHhCCcCCCcEEEE
Confidence            99874222  1    2333332  24666675554

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.79  E-value=2.7  Score=30.56  Aligned_cols=55  Identities=25%  Similarity=0.267  Sum_probs=38.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCce
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFDDA   88 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~~~   88 (228)
                      +.+.+.++++|+... +|.-|.+++..|+..|.+.+++.   .++.+...++ .+|+.-+
T Consensus        54 ~~g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~vv  111 (310)
T d1y7la1          54 KDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNLV  111 (310)
T ss_dssp             HTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred             HcCCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCceE
Confidence            446677887766665 69999999999999998544333   2455666666 7887443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.79  E-value=0.29  Score=35.22  Aligned_cols=30  Identities=27%  Similarity=0.218  Sum_probs=26.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |.+|+.++..+...|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788996 999999888888889999999864

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.74  E-value=0.13  Score=34.87  Aligned_cols=90  Identities=16%  Similarity=0.164  Sum_probs=49.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC-C--H---HHHHHHHHHh-CCC--ceeeccChhhHHHHHHHHCCCCcc
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAG-S--K---EKVTLLKDKL-GFD--DAFNYKEETDLKAALKRYFPDGID  110 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~-~--~---~~~~~~~~~~-g~~--~~~~~~~~~~~~~~~~~~~~~~~d  110 (228)
                      +|.|.||+|-+|.-+++++... ..++..+.. +  .   ++.......+ +..  ......+.        ......+|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence            6899999999999999999876 456654431 1  1   1121111011 111  11111111        01123689


Q ss_pred             EEEcCcchhHHHHHHH-ccccCcEEEEEe
Q 027106          111 IYFDNVGAEMQEAAIA-NMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld~~g~~~~~~~~~-~l~~~G~~v~~g  138 (228)
                      ++|-|.+......... .+..+-+++..+
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlS  103 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLS  103 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeeccc
Confidence            9999999864444444 445555666655

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.70  E-value=0.23  Score=36.71  Aligned_cols=31  Identities=32%  Similarity=0.313  Sum_probs=26.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      =|+|+|+ |..|+.++.-|...|++|++++..
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3799995 999999998888889999999854

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.61  E-value=0.21  Score=34.92  Aligned_cols=40  Identities=8%  Similarity=-0.088  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFG-------CYVVGSAGSKEKVTLLK   80 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g-------~~V~~~~~~~~~~~~~~   80 (228)
                      -+|+|+|+ |+.|++++..+...|       ++|.+.+..+.-..+++
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG~~~   49 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR   49 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCCeee
Confidence            48999995 999999998777666       57999997665444443

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.58  E-value=0.69  Score=31.11  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=28.6

Q ss_pred             CCCCCEEEEEc---CCchHHHHHHHHHHHcCCEEEE
Q 027106           36 PKKGEKVFVSA---ASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus        36 ~~~g~~VlI~g---a~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      +.+|++|||.-   +||+.-.+++++++..|++|+.
T Consensus       115 i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg  150 (178)
T d1zn7a1         115 LEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE  150 (178)
T ss_dssp             SCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred             ccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEE
Confidence            57899999884   6899999999999999998754

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.38  E-value=1.5  Score=31.66  Aligned_cols=73  Identities=11%  Similarity=0.148  Sum_probs=44.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      +.+-+||=.|  +|.|..++.+++.. .++|++++.+++..+.+++   .++...+-....  ++.   ....++.||+|
T Consensus       107 ~~~~~vlDlG--tGSG~I~i~la~~~p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~--d~~---~~~~~~~fDlI  179 (274)
T d2b3ta1         107 EQPCRILDLG--TGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS--DWF---SALAGQQFAMI  179 (274)
T ss_dssp             SSCCEEEEET--CTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC--STT---GGGTTCCEEEE
T ss_pred             ccccceeeee--hhhhHHHHHHHhhCCcceeeeccchhHHHhHHHHHHHHhCcccceeeec--ccc---cccCCCceeEE
Confidence            3455677666  55566666677766 5699999999998888763   356543321211  221   11223479998


Q ss_pred             EcCc
Q 027106          113 FDNV  116 (228)
Q Consensus       113 ld~~  116 (228)
                      +.+-
T Consensus       180 vsNP  183 (274)
T d2b3ta1         180 VSNP  183 (274)
T ss_dssp             EECC
T ss_pred             Eecc
Confidence            8653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.33  E-value=2.8  Score=27.92  Aligned_cols=103  Identities=13%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             HHHHh-cCCCCCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHH
Q 027106           29 GLFEI-GKPKKGEKVFVSA-ASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALK  102 (228)
Q Consensus        29 ~l~~~-~~~~~g~~VlI~g-a~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~  102 (228)
                      ++++. .....|.+||=.. |+|++|+.+    ...|+ +|+.++.+++..+.+++   .++...-+..... +..+.+.
T Consensus        31 alFn~l~~~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~-D~~~~l~  105 (182)
T d2fhpa1          31 SIFNMIGPYFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM-DANRALE  105 (182)
T ss_dssp             HHHHHHCSCCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccc-cchhhhh
Confidence            34443 3455788887654 466676643    34677 89999999998888763   2454321211122 4444444


Q ss_pred             HHC-CC-CccEEEcCcc------hhHHHHHHH--ccccCcEEEE
Q 027106          103 RYF-PD-GIDIYFDNVG------AEMQEAAIA--NMNTYGRVAV  136 (228)
Q Consensus       103 ~~~-~~-~~d~vld~~g------~~~~~~~~~--~l~~~G~~v~  136 (228)
                      ++. .+ .||+||-.-+      ...+..+.+  +|+++|.++.
T Consensus       106 ~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~giIi~  149 (182)
T d2fhpa1         106 QFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVC  149 (182)
T ss_dssp             HHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             hhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCCEEEEE
Confidence            332 23 7999874332      124444443  5788887663

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=87.19  E-value=1.7  Score=30.61  Aligned_cols=97  Identities=12%  Similarity=0.126  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHH--HCCCCcc
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKR--YFPDGID  110 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~--~~~~~~d  110 (228)
                      ..+.+++=.|.  |-|.=-+-+|-.. ..+++.++++..+...+++   ++|...+.....  ... ....  ...+.||
T Consensus        69 ~~~~~ilDiGS--GaGfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~--R~E-~~~~~~~~~~~~D  143 (239)
T d1xdza_          69 NQVNTICDVGA--GAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHD--RAE-TFGQRKDVRESYD  143 (239)
T ss_dssp             GGCCEEEEECS--SSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES--CHH-HHTTCTTTTTCEE
T ss_pred             cCCCeEEeecC--CCchHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEee--hhh-hccccccccccce
Confidence            45678888883  2233333334334 4699999999998877652   577755432221  111 1111  1123799


Q ss_pred             EEEc-Ccch--hHHHHHHHccccCcEEEEEe
Q 027106          111 IYFD-NVGA--EMQEAAIANMNTYGRVAVCG  138 (228)
Q Consensus       111 ~vld-~~g~--~~~~~~~~~l~~~G~~v~~g  138 (228)
                      +|.. +++.  ..+..+...++++|+++.+=
T Consensus       144 ~v~sRAva~l~~ll~~~~~~l~~~g~~i~~K  174 (239)
T d1xdza_         144 IVTARAVARLSVLSELCLPLVKKNGLFVALK  174 (239)
T ss_dssp             EEEEECCSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEEhhhhCHHHHHHHHhhhcccCCEEEEEC
Confidence            9886 4443  47888889999999999874

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.94  E-value=1  Score=28.41  Aligned_cols=87  Identities=10%  Similarity=0.158  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCch--H---------HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceee-ccChhhHHHHHHHH
Q 027106           37 KKGEKVFVSAASGS--V---------GHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFN-YKEETDLKAALKRY  104 (228)
Q Consensus        37 ~~g~~VlI~ga~g~--~---------G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~  104 (228)
                      ..-++|||.|+ |+  +         +..++..+|..|.+++.+..+++....-. .. +++++. +=..+...+.++. 
T Consensus         5 ~~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-d~-aD~lYfePlt~e~v~~Ii~~-   80 (127)
T d1a9xa3           5 TDIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-EM-ADATYIEPIHWEVVRKIIEK-   80 (127)
T ss_dssp             SSCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-GG-SSEEECSCCCHHHHHHHHHH-
T ss_pred             CCCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-hh-cceeeeecCCHHHHHHHHHH-
Confidence            34579999995 55  2         33445555667999999998887642211 11 133332 2222133333333 


Q ss_pred             CCCCccEEEcCcchh-HHHHHHHccc
Q 027106          105 FPDGIDIYFDNVGAE-MQEAAIANMN  129 (228)
Q Consensus       105 ~~~~~d~vld~~g~~-~~~~~~~~l~  129 (228)
                        +.+|.|+-..|+. .++.+.++.+
T Consensus        81 --E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          81 --ERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             --HCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             --hCcCCeEEEeeeehHhHHHHHHHH
Confidence              2578888888875 5555555433

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=86.70  E-value=0.27  Score=36.28  Aligned_cols=30  Identities=20%  Similarity=0.192  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|+ |..|+.++..|...|++|++++..
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            888995 999999988888889999999864

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=86.62  E-value=1.2  Score=29.62  Aligned_cols=99  Identities=17%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc---CCEEEEEeC--CHHHHHHHHHHh----CC-CceeeccCh------hh----HHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF---GCYVVGSAG--SKEKVTLLKDKL----GF-DDAFNYKEE------TD----LKAA  100 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~---g~~V~~~~~--~~~~~~~~~~~~----g~-~~~~~~~~~------~~----~~~~  100 (228)
                      +|.|.| -|-+|+++.+.+...   +.+|+.+..  +.+...++. ++    |. ..-+...+.      ..    -...
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            688999 699999999877643   358877754  344555554 33    21 000000000      00    0001


Q ss_pred             HHHHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          101 LKRYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       101 ~~~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      ..++.. . ++|+|+||+|- .....+...+..|.+-|.++.+.
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            111221 2 79999999997 56677777888877667766544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=86.48  E-value=0.7  Score=32.33  Aligned_cols=65  Identities=17%  Similarity=0.214  Sum_probs=38.4

Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCcc
Q 027106           47 ASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNVG  117 (228)
Q Consensus        47 a~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  117 (228)
                      .+|-+|.+.++.|...|++|+.++..... .    ......++......++...+.+... ..|+++.++.
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-~----~p~~~~~~~~~t~~~m~~~~~~~~~-~~D~~i~aAA   94 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL-P----TPPFVKRVDVMTALEMEAAVNASVQ-QQNIFIGCAA   94 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC-C----CCTTEEEEECCSHHHHHHHHHHHGG-GCSEEEECCB
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc-C----cccccccceehhhHHHHHHHHhhhc-cceeEeeeec
Confidence            46779999999999999999998854321 0    1111122333332255555544432 4677766554

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=86.30  E-value=0.28  Score=36.28  Aligned_cols=30  Identities=13%  Similarity=0.009  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|+ |..|+.++--|...|++|++++..
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            788895 999999998888899999999854

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.22  E-value=2.5  Score=26.17  Aligned_cols=89  Identities=18%  Similarity=0.232  Sum_probs=54.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcC
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDN  115 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  115 (228)
                      +.+..+|+|.|-+|..|....+.++.+|-+|++-+......+..   .| -.++|     ...+.+++ +  ++|.-+=+
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~---~g-iPVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV---LG-VPVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TT-EEEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE---EC-CchHh-----hHHHHHHh-c--CCeEEEEe
Confidence            45677999999999999999999999999888766332211110   01 12332     33333433 3  36666666


Q ss_pred             cchh-HHHHHHHccccCcEEEE
Q 027106          116 VGAE-MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       116 ~g~~-~~~~~~~~l~~~G~~v~  136 (228)
                      ++.+ ..+.+++++..+=+++.
T Consensus        72 VPp~~a~dAi~EAi~agI~liv   93 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIV   93 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEE
Confidence            6653 55566667766654444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=86.08  E-value=1.8  Score=27.77  Aligned_cols=60  Identities=10%  Similarity=0.035  Sum_probs=46.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCceeecc
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFG--CYVVGSAGSKEKVTLLKDKLGFDDAFNYK   92 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (228)
                      +.+++..-+.|++....-..-..++..++.++  .++++...+++..+.++ ++|++.++++.
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~  126 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQ  126 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHH
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHH
Confidence            56778888888777655556677788888764  38888888888888888 99998887654

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.76  E-value=0.46  Score=33.83  Aligned_cols=30  Identities=23%  Similarity=0.146  Sum_probs=26.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      |+|+|| |+.|+.++..|...|.+|.+++..
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            678895 999999999999999999999864

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=85.62  E-value=1.6  Score=28.97  Aligned_cols=99  Identities=16%  Similarity=0.158  Sum_probs=56.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC--CHHHHHHHHHHhCCCc-----eeeccCh------hh----HHHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLF-GCYVVGSAG--SKEKVTLLKDKLGFDD-----AFNYKEE------TD----LKAALK  102 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~--~~~~~~~~~~~~g~~~-----~~~~~~~------~~----~~~~~~  102 (228)
                      +|.|.| -|-+|+++.+.+... ..+|+++..  +.+...++. ++.-.+     -+...+.      ..    ......
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll-~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~   80 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLL-KYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE   80 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhh-cccccCCcccccccccCCCEEeCCcceeeEecCCHH
Confidence            678988 699999998777644 347777753  333444444 332100     0000000      00    000112


Q ss_pred             HHCC-C-CccEEEcCcch-hHHHHHHHccccCcEEEEEeeec
Q 027106          103 RYFP-D-GIDIYFDNVGA-EMQEAAIANMNTYGRVAVCGVIS  141 (228)
Q Consensus       103 ~~~~-~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~  141 (228)
                      +... . ++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        81 ~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             HccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence            2222 2 79999999997 56677777888877666666544

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.30  E-value=2.1  Score=29.74  Aligned_cols=45  Identities=22%  Similarity=0.202  Sum_probs=33.5

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 027106           27 YAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS   72 (228)
Q Consensus        27 ~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~   72 (228)
                      +.++....+--...+|+++|+ |..|...+++....+. +++.+++.
T Consensus        14 l~a~~~~g~~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          14 LNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHHhCCChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            334433344557789999996 9999888888888887 88888864

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=85.13  E-value=2.8  Score=25.83  Aligned_cols=35  Identities=29%  Similarity=0.413  Sum_probs=30.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA   70 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~   70 (228)
                      +.+..+|+|.|-+|..|....+..+.+|-+|++-+
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGV   37 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV   37 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEE
Confidence            35677999999999999999999999999888655

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=84.92  E-value=1.1  Score=28.86  Aligned_cols=38  Identities=21%  Similarity=0.163  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      ...+|.|.|+ |.+|..++..+...|.  +++.++.++++.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3468999995 9999998888777774  899999887653

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=84.88  E-value=0.6  Score=32.84  Aligned_cols=32  Identities=22%  Similarity=0.132  Sum_probs=27.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKE   74 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~   74 (228)
                      |+|+|| |.-|+-|+-.|..+|+++.+++.+.+
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~~~   36 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQSLD   36 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEeccc
Confidence            678896 99999999999999999998886643

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.82  E-value=0.41  Score=34.53  Aligned_cols=31  Identities=29%  Similarity=0.125  Sum_probs=25.6

Q ss_pred             EEEEcCCchHHHHHHH-HHHHcCCEEEEEeCCH
Q 027106           42 VFVSAASGSVGHLVGQ-YAKLFGCYVVGSAGSK   73 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~-~a~~~g~~V~~~~~~~   73 (228)
                      |+|+|| |+.|+.++. +|+..|.+|.+++.++
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            899996 999998775 4566799999999764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.82  E-value=0.96  Score=29.41  Aligned_cols=37  Identities=16%  Similarity=0.090  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEK   75 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~   75 (228)
                      |..+|-|.|+ |.+|..++.++...+. ++..++.++++
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            4678999995 9999888877777776 88888876643

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.66  E-value=2.4  Score=31.17  Aligned_cols=111  Identities=17%  Similarity=0.139  Sum_probs=65.1

Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCceeeccChhh------
Q 027106           26 AYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFDDAFNYKEETD------   96 (228)
Q Consensus        26 a~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~------   96 (228)
                      |++.+....+-.++.+|+... +|..|.+++..++..|.+++++.   .+..+.+.++ .+|++-+....+...      
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            455553433334455555554 69999999999999998655554   2556777777 888753322111100      


Q ss_pred             -------------------------HHHHHHHHCCCCccEEEcCcch-h---HHHHHHHccccCcEEEEEee
Q 027106           97 -------------------------LKAALKRYFPDGIDIYFDNVGA-E---MQEAAIANMNTYGRVAVCGV  139 (228)
Q Consensus        97 -------------------------~~~~~~~~~~~~~d~vld~~g~-~---~~~~~~~~l~~~G~~v~~g~  139 (228)
                                               ....+.+-. +.+|.||-++|+ .   .+...++.+.+..+++.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                                     111111111 258999988775 3   44455566677788887753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=84.57  E-value=0.98  Score=32.58  Aligned_cols=74  Identities=18%  Similarity=0.216  Sum_probs=40.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      .+++-.|  +|.|..++.+++...++|++++.+++..+.+++   .++....+..... ++.+..... .+.||+|+.+-
T Consensus       112 ~~vld~g--~GsG~i~~~la~~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~-~~~~~~~~~-~~~fDlIVsNP  187 (271)
T d1nv8a_         112 KTVADIG--TGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG-EFLEPFKEK-FASIEMILSNP  187 (271)
T ss_dssp             CEEEEES--CTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES-STTGGGGGG-TTTCCEEEECC
T ss_pred             cEEEEee--eeeehhhhhhhhcccceeeechhhhhHHHHHHHHHHHcCCCceeEEeec-ccccccccc-cCcccEEEEcc
Confidence            3555444  333333444566677899999999999888873   3455332211111 222222211 23689988654


Q ss_pred             c
Q 027106          117 G  117 (228)
Q Consensus       117 g  117 (228)
                      +
T Consensus       188 P  188 (271)
T d1nv8a_         188 P  188 (271)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=84.52  E-value=1.1  Score=31.48  Aligned_cols=33  Identities=24%  Similarity=0.178  Sum_probs=28.0

Q ss_pred             CCCCCEEEEEc---CCchHHHHHHHHHHHcCCEEEE
Q 027106           36 PKKGEKVFVSA---ASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus        36 ~~~g~~VlI~g---a~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      +.+|++|||.-   +||+.-.+++++++..|++|+.
T Consensus       135 l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg  170 (236)
T d1qb7a_         135 IGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVE  170 (236)
T ss_dssp             SCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred             ccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEE
Confidence            56899999874   6899999999999999997653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.24  E-value=0.8  Score=29.61  Aligned_cols=33  Identities=24%  Similarity=0.115  Sum_probs=28.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSK   73 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~   73 (228)
                      +|.|.||+|.+|..++.++...+.  ++..++.++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            689999889999999988888884  888888654

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=84.15  E-value=0.53  Score=33.52  Aligned_cols=30  Identities=13%  Similarity=0.191  Sum_probs=26.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           42 VFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        42 VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      ++|+|+ |+.|+.++..+..+|.+|.++...
T Consensus        45 vvVIGg-G~aG~~aA~~~a~~G~kv~vve~~   74 (261)
T d1mo9a1          45 AIFIGG-GAAGRFGSAYLRAMGGRQLIVDRW   74 (261)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            788895 999999999999999999999864

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=84.05  E-value=0.14  Score=37.87  Aligned_cols=24  Identities=13%  Similarity=0.166  Sum_probs=21.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC   64 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~   64 (228)
                      +|||+||+|-+|..+++.+...|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~   25 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAY   25 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC
Confidence            699999999999999988877765

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.71  E-value=2.4  Score=29.83  Aligned_cols=35  Identities=26%  Similarity=0.406  Sum_probs=29.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAK-LFGCYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~-~~g~~V~~~~~~   72 (228)
                      -+|.+|+|.| .|.+|..+++++. ..|++|+.+..+
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            4789999999 5999999998764 579999887643

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.67  E-value=1.4  Score=29.51  Aligned_cols=34  Identities=15%  Similarity=0.290  Sum_probs=28.9

Q ss_pred             CCCCCCEEEEEc---CCchHHHHHHHHHHHcCCEEEE
Q 027106           35 KPKKGEKVFVSA---ASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus        35 ~~~~g~~VlI~g---a~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      .+.+|++|||.-   +||+.-.+++++++..|++|+.
T Consensus       118 ~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg  154 (178)
T d1g2qa_         118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE  154 (178)
T ss_dssp             SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred             cccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEE
Confidence            367899999874   6899999999999999998654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.60  E-value=0.77  Score=28.64  Aligned_cols=38  Identities=21%  Similarity=0.213  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCch--HH---------HHHHHHHHHcCCEEEEEeCCHHHH
Q 027106           38 KGEKVFVSAASGS--VG---------HLVGQYAKLFGCYVVGSAGSKEKV   76 (228)
Q Consensus        38 ~g~~VlI~ga~g~--~G---------~~a~~~a~~~g~~V~~~~~~~~~~   76 (228)
                      ..++|||.|+ |+  +|         ..+++.+|..|.+++.+..+++..
T Consensus         3 ~~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTV   51 (121)
T d1a9xa4           3 DREKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETV   51 (121)
T ss_dssp             SSCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSS
T ss_pred             CCCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhh
Confidence            3568999994 65  22         344555666799999999888754

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.55  E-value=0.46  Score=36.14  Aligned_cols=31  Identities=19%  Similarity=0.154  Sum_probs=23.6

Q ss_pred             EEEEEcCCchHHHHHHHH-HHH-----cCCEEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQY-AKL-----FGCYVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~-a~~-----~g~~V~~~~~~   72 (228)
                      =|+|+|| |+.|++++.. |+.     .|.+|.++++.
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~   70 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKA   70 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCC
Confidence            3788896 9999877644 442     68899999965

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=83.51  E-value=1.4  Score=28.38  Aligned_cols=36  Identities=25%  Similarity=0.183  Sum_probs=28.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      .+|.|+|+ |.+|..++..+...|.  +++.++.++++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            57889995 9999888887777674  888999887753

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.45  E-value=3.3  Score=26.61  Aligned_cols=44  Identities=18%  Similarity=0.021  Sum_probs=29.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGF   85 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~   85 (228)
                      ++|-++| .|.||...+.-+...|..+ +..++.++...+.++.+.
T Consensus         1 ekIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~   44 (156)
T d2cvza2           1 EKVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGS   44 (156)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCC
T ss_pred             CeEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCC
Confidence            4688899 6999987776666566655 556666655555435553

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.33  E-value=4.4  Score=26.63  Aligned_cols=73  Identities=18%  Similarity=0.207  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCCchHHHHH---HHHHHH--c-CCEEEEEeCCHHHHHHHH-------HHhCCCceeeccChhhHHHHHHHH
Q 027106           38 KGEKVFVSAASGSVGHLV---GQYAKL--F-GCYVVGSAGSKEKVTLLK-------DKLGFDDAFNYKEETDLKAALKRY  104 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a---~~~a~~--~-g~~V~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~  104 (228)
                      |+-+|-|.|| |.+|...   ..+++.  . +.+++.++.++++.+...       ..++...-+....  +..+.+   
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM--NLDDVI---   74 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES--CHHHHH---
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC--Chhhcc---
Confidence            4568999996 9888542   223332  2 349999999988765321       1334332222221  333333   


Q ss_pred             CCCCccEEEcCcch
Q 027106          105 FPDGIDIYFDNVGA  118 (228)
Q Consensus       105 ~~~~~d~vld~~g~  118 (228)
                        .+.|+|+.+.+.
T Consensus        75 --~dad~Vv~~~~~   86 (171)
T d1obba1          75 --IDADFVINTAMV   86 (171)
T ss_dssp             --TTCSEEEECCCT
T ss_pred             --cCCCeEeeeccc
Confidence              258999998764

>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA adenine dimethylase-like
domain: rRNA adenine dimethylase
species: Bacillus subtilis, Ermc' [TaxId: 1423]

Probab=83.27  E-value=2.4  Score=29.68  Aligned_cols=49  Identities=12%  Similarity=0.149  Sum_probs=40.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 027106           32 EIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKL   83 (228)
Q Consensus        32 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~   83 (228)
                      +..+++++|+||=+|  .|.|.++..+++. +.+|+++..++.-.+.+++.+
T Consensus        15 ~~~~~~~~d~VlEIG--pG~G~LT~~Ll~~-~~~v~avE~D~~l~~~l~~~~   63 (235)
T d1qama_          15 TNIRLNEHDNIFEIG--SGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKL   63 (235)
T ss_dssp             TTCCCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHT
T ss_pred             HhcCCCCCCeEEEEC--CCchHHHHHHHhC-cCceEEEeeccchHHHHHHHh
Confidence            667889999999999  6778888888874 789999999888888888444

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.94  E-value=3.3  Score=28.02  Aligned_cols=44  Identities=27%  Similarity=0.224  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Q 027106           35 KPKKGEKVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD   81 (228)
Q Consensus        35 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~   81 (228)
                      +--+|++||=.|+  |.|..++.++ ..|+ +|++++.++...+.+++
T Consensus        43 ~dl~g~~vLDlg~--GtG~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~   87 (201)
T d1wy7a1          43 GDIEGKVVADLGA--GTGVLSYGAL-LLGAKEVICVEVDKEAVDVLIE   87 (201)
T ss_dssp             TSSTTCEEEEETC--TTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred             CCCCCCEEEECcC--cchHHHHHHH-HcCCCEEEEEcCcHHHHHHHHH
Confidence            3346889999883  3444444444 4676 99999999998888873

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.73  E-value=0.6  Score=30.48  Aligned_cols=41  Identities=22%  Similarity=0.212  Sum_probs=32.3

Q ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE
Q 027106           25 TAYAGLFEIGKPKKGEKVFVSAASGSVGHLVGQYAKLFGCYVVG   68 (228)
Q Consensus        25 ta~~~l~~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~   68 (228)
                      +++..|  ..+...|++|+|.|| |.+|.-++..+...|+++..
T Consensus        17 ~a~d~L--~~~~~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~~   57 (162)
T d1ps9a2          17 SYLDVL--RDKAPVGNKVAIIGC-GGIGFDTAMYLSQPGESTSQ   57 (162)
T ss_dssp             EHHHHH--TSCCCCCSEEEEECC-HHHHHHHHHHHTCCSSCGGG
T ss_pred             EHHHHh--hCccccCCceEEEcC-chhHHHHHHHHHHcCCccce
Confidence            455555  356788999999996 99999999999999985443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=82.41  E-value=1.1  Score=28.61  Aligned_cols=35  Identities=20%  Similarity=-0.018  Sum_probs=28.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      +|.|.|+ |.+|..++..+...+.  ++..++.++++.
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~   38 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP   38 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence            5889996 9999998888777774  899999776654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.19  E-value=0.73  Score=33.35  Aligned_cols=31  Identities=16%  Similarity=0.171  Sum_probs=24.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC-YVVGSAGS   72 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~-~V~~~~~~   72 (228)
                      .|+|+|| |.+|++++..+...|. +|.+++++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            5899996 9999988766666786 69888754

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.01  E-value=1.1  Score=28.33  Aligned_cols=67  Identities=13%  Similarity=0.186  Sum_probs=39.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHH----HHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCC-Ccc
Q 027106           36 PKKGEKVFVSAASGSVGHLVGQY----AKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPD-GID  110 (228)
Q Consensus        36 ~~~g~~VlI~ga~g~~G~~a~~~----a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d  110 (228)
                      ++++++++|.|| |.+|.-++..    ++..|.+|+.+.+++.-+         ...++   . +..+.+.+.... |++
T Consensus        34 ~~~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l---------~~~~~---~-~~~~~~~~~l~~~GV~   99 (137)
T d1m6ia2          34 SREVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNM---------GKILP---E-YLSNWTMEKVRREGVK   99 (137)
T ss_dssp             HHHCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT---------TTTSC---H-HHHHHHHHHHHTTTCE
T ss_pred             hhcCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCC---------cccCC---H-HHHHHHHHHHHhCCcE
Confidence            356789999996 9998554432    256799999988653211         11111   1 444444443333 788


Q ss_pred             EEEcCc
Q 027106          111 IYFDNV  116 (228)
Q Consensus       111 ~vld~~  116 (228)
                      +.+++.
T Consensus       100 ~~~~~~  105 (137)
T d1m6ia2         100 VMPNAI  105 (137)
T ss_dssp             EECSCC
T ss_pred             EEeCCE
Confidence            877654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.41  E-value=0.53  Score=28.60  Aligned_cols=35  Identities=14%  Similarity=-0.039  Sum_probs=20.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAGS   72 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~~   72 (228)
                      -+|++|+|.|+ |..|.-.+.-+.....+++...++
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r   64 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLL   64 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECT
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEec
Confidence            46899999996 666654433333334455555543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=81.11  E-value=4.1  Score=27.02  Aligned_cols=92  Identities=12%  Similarity=-0.042  Sum_probs=51.2

Q ss_pred             CCCEEEEEc-CCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCceeeccChhhHHHHHHHHCCCCccEE
Q 027106           38 KGEKVFVSA-ASGSVGHLVGQYAKLFGC-YVVGSAGSKEKVTLLKD---KLGFDDAFNYKEETDLKAALKRYFPDGIDIY  112 (228)
Q Consensus        38 ~g~~VlI~g-a~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  112 (228)
                      .+.+||=.. |+|.+|+   . |.+.|+ +|+.++.+.+..+.+++   .++...+-....  +..+.+.. ....||+|
T Consensus        43 ~~~~vLDlfaGsG~~gi---e-alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~--d~~~~l~~-~~~~fDlI  115 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGL---E-ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNS--NAMSFLAQ-KGTPHNIV  115 (183)
T ss_dssp             TTCEEEETTCTTCHHHH---H-HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS--CHHHHHSS-CCCCEEEE
T ss_pred             chhhhhhhhccccceee---e-EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeee--cccccccc-cccccCEE
Confidence            556666554 3555555   3 344687 89999999998887763   345544322222  33333432 22379998


Q ss_pred             EcCcc--hh----HHHHHHH--ccccCcEEEE
Q 027106          113 FDNVG--AE----MQEAAIA--NMNTYGRVAV  136 (228)
Q Consensus       113 ld~~g--~~----~~~~~~~--~l~~~G~~v~  136 (228)
                      |---+  ..    .+..+.+  .|+++|.++.
T Consensus       116 f~DPPY~~~~~~~~l~~l~~~~~L~~~~iIii  147 (183)
T d2fpoa1         116 FVDPPFRRGLLEETINLLEDNGWLADEALIYV  147 (183)
T ss_dssp             EECCSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             EEcCccccchHHHHHHHHHHCCCCCCCeEEEE
Confidence            74322  22    3333332  4677776655

>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Chalcone O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=81.01  E-value=6.7  Score=27.36  Aligned_cols=95  Identities=12%  Similarity=0.039  Sum_probs=57.4

Q ss_pred             HhcC-CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC-CceeeccChhhHHHHHHHHCCCC
Q 027106           32 EIGK-PKKGEKVFVSAASGSVGHLVGQYAKLF-GCYVVGSAGSKEKVTLLKDKLGF-DDAFNYKEETDLKAALKRYFPDG  108 (228)
Q Consensus        32 ~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~  108 (228)
                      .... +....+|+-.|  ||.|..++.+++.. +.++++.+. ++..   + ..+. +.+ ..-.. ++-   .. .+ +
T Consensus        74 ~~~~~f~~~~~vlDiG--GG~G~~~~~l~~~~P~l~~~v~Dl-p~vi---~-~~~~~~ri-~~~~g-d~~---~~-~p-~  139 (244)
T d1fp1d2          74 EIYTGFEGISTLVDVG--GGSGRNLELIISKYPLIKGINFDL-PQVI---E-NAPPLSGI-EHVGG-DMF---AS-VP-Q  139 (244)
T ss_dssp             HHCCTTTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHH---T-TCCCCTTE-EEEEC-CTT---TC-CC-C
T ss_pred             HhcccccCCcEEEEec--CCCcHHHHHHHHHCCCCeEEEecc-hhhh---h-ccCCCCCe-EEecC-Ccc---cc-cc-c
Confidence            3344 46667888887  78888999998876 469998884 3332   2 3222 222 11111 221   11 12 4


Q ss_pred             ccEEEcC-----cch----hHHHHHHHccccCcEEEEEeee
Q 027106          109 IDIYFDN-----VGA----EMQEAAIANMNTYGRVAVCGVI  140 (228)
Q Consensus       109 ~d~vld~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  140 (228)
                      .|+++-.     -+.    ..+..+.+.|+|+|++++....
T Consensus       140 ~D~~~l~~vLh~~~de~~~~iL~~~~~aL~pgg~llI~e~v  180 (244)
T d1fp1d2         140 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI  180 (244)
T ss_dssp             EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ceEEEEehhhhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEE
Confidence            5776532     111    2678888999999999998864

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=80.95  E-value=2.5  Score=27.63  Aligned_cols=39  Identities=15%  Similarity=0.023  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           37 KKGEKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        37 ~~g~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      .+..+|-|+|+ |.+|..++..+...|.  +++.++.++++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            45679999996 9999999988888886  899999876653

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.86  E-value=3.9  Score=29.45  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=31.2

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCC
Q 027106           43 FVSAASGSVGHLVGQYAKLFGCYVVGSA---GSKEKVTLLKDKLGFD   86 (228)
Q Consensus        43 lI~ga~g~~G~~a~~~a~~~g~~V~~~~---~~~~~~~~~~~~~g~~   86 (228)
                      ++...+|..|.+++..++.+|.+.+++.   .++.+.+.++ .+|++
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~GA~  103 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLK-MLGAE  103 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccc-cCCcE
Confidence            5666679999999999999988433332   3566777777 78874

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.60  E-value=3.4  Score=30.04  Aligned_cols=48  Identities=21%  Similarity=0.242  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCC
Q 027106           38 KGEKVFVSAASGSVGHLVGQYAKLFGCYVVGSAG---SKEKVTLLKDKLGFD   86 (228)
Q Consensus        38 ~g~~VlI~ga~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~   86 (228)
                      .|..-+|...+|..|.+++..|+.+|.+.+++..   ++.+.+.++ .+|+.
T Consensus        52 ~g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~Ga~  102 (319)
T d1p5ja_          52 QGCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLK-NEGAT  102 (319)
T ss_dssp             TTCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHH-HTTCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccc-cceec
Confidence            3434456666799999999999999985544442   455666666 77763

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.44  E-value=2.1  Score=27.29  Aligned_cols=35  Identities=20%  Similarity=0.140  Sum_probs=27.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           41 KVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        41 ~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      +|.|.|+ |.+|..++..+...+.  ++..++.++++.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            6788996 9999888776666664  899999877654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=80.43  E-value=2.6  Score=26.96  Aligned_cols=36  Identities=33%  Similarity=0.301  Sum_probs=29.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 027106           40 EKVFVSAASGSVGHLVGQYAKLFGC--YVVGSAGSKEKV   76 (228)
Q Consensus        40 ~~VlI~ga~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~   76 (228)
                      .+|.|+|+ |.+|..++..+...+.  +++.++.++++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            47889996 9999998887777775  899999887653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.07  E-value=2.3  Score=26.12  Aligned_cols=79  Identities=13%  Similarity=0.132  Sum_probs=48.0

Q ss_pred             CEEEEEcCC---chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCceeeccChhhHHHHHHHHCCCCccEEEcCc
Q 027106           40 EKVFVSAAS---GSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDAFNYKEETDLKAALKRYFPDGIDIYFDNV  116 (228)
Q Consensus        40 ~~VlI~ga~---g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  116 (228)
                      ++|.|.|++   +-.|..+++.++..|.+|+.+..+.+.      -+|..- +  .+.       .++ +..+|+++=+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~------i~G~~~-y--~sl-------~~l-p~~~D~vvi~v   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE------IEGLKC-Y--RSV-------REL-PKDVDVIVFVV   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE------ETTEEC-B--SSG-------GGS-CTTCCEEEECS
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc------ccCccc-c--ccc-------hhc-cccceEEEEEe
Confidence            578999975   457888999999999999988744221      233211 1  111       111 23689999888


Q ss_pred             chhHHHHHHH-ccccCcEEE
Q 027106          117 GAEMQEAAIA-NMNTYGRVA  135 (228)
Q Consensus       117 g~~~~~~~~~-~l~~~G~~v  135 (228)
                      ..+.....++ +.+.+-+.+
T Consensus        65 p~~~~~~~l~~~~~~g~k~v   84 (116)
T d1y81a1          65 PPKVGLQVAKEAVEAGFKKL   84 (116)
T ss_dssp             CHHHHHHHHHHHHHTTCCEE
T ss_pred             CHHHHHHHHHHHHhcCCceE
Confidence            8765544444 444443433

>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: RNA methyltransferase FtsJ
domain: RNA methyltransferase FtsJ
species: Escherichia coli [TaxId: 562]

Probab=80.03  E-value=6.2  Score=26.13  Aligned_cols=94  Identities=16%  Similarity=0.084  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCce-eeccChhhHHHHHHHHCC-CCccEE
Q 027106           36 PKKGEKVFVSAA-SGSVGHLVGQYAKLFGCYVVGSAGSKEKVTLLKDKLGFDDA-FNYKEETDLKAALKRYFP-DGIDIY  112 (228)
Q Consensus        36 ~~~g~~VlI~ga-~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~d~v  112 (228)
                      ++++++||=.|+ .|+--+.+.+... ...+|+.++..+-+  -   --|...+ -+..+. .....+..... +++|+|
T Consensus        20 ~k~~~~vlDLg~aPGgw~q~~~~~~~-~~~~v~~vDl~~~~--~---i~~~~~~~~d~~~~-~~~~~~~~~~~~~~~DlV   92 (180)
T d1ej0a_          20 FKPGMTVVDLGAAPGGWSQYVVTQIG-GKGRIIACDLLPMD--P---IVGVDFLQGDFRDE-LVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCTTCEEEEESCTTCHHHHHHHHHHC-TTCEEEEEESSCCC--C---CTTEEEEESCTTSH-HHHHHHHHHHTTCCEEEE
T ss_pred             cCCCCeEEEEeccCCcceEEEEeecc-ccceEEEeeccccc--c---cCCceEeecccccc-hhhhhhhhhccCcceeEE
Confidence            589999988884 3333232222211 12378888855421  0   1121111 122222 33334443333 489998


Q ss_pred             Ec-----Ccchh-------------HHHHHHHccccCcEEEE
Q 027106          113 FD-----NVGAE-------------MQEAAIANMNTYGRVAV  136 (228)
Q Consensus       113 ld-----~~g~~-------------~~~~~~~~l~~~G~~v~  136 (228)
                      +.     ++|..             .+..+.+.|++||.+|+
T Consensus        93 lSD~ap~~sg~~~~d~~~~~~L~~~~l~~a~~~Lk~gG~fV~  134 (180)
T d1ej0a_          93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV  134 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             EecccchhcccchhHHHHHHHHHHHHHHhhhhccCCCCcEEE
Confidence            73     44532             33446789999999998