Citrus Sinensis ID: 027178

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
MYQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
ccccccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHcccccHHHHHHHHHccccccEEEcccEEEEccccccccccHHHHHHccccccccccccccEEcccccccccccccccccccEEccHHHHHHHHHHccccEEEEHHHHHccccEEEEccccEEEEEcccccccccccEEEEEEEcccccEEEEEEcccccccccccccccccccc
ccccEEEccHHHHHHHHHHHHHHccccEEEcccccccHHHHHHccHHHHHHHHcccHHHHHHHHHHHcccccEEEEcccEEEEccccccccccHHHHHHcccccccccccHHHHHHHcEEccccccccccccccEcccHHHHHHHHHHccccHHHHHHHHHHHccEEEccccEEEEEEEccccccccccHEEEEEEccccccEEEEEcccccccccccccccccccc
MYQRQITYLCLEVFTILLLLKArypanitllrgnhesrqltqvygFYDECqrkygnanawrYCTDVFDYLTLSAIIDGTVlcvhgglspdirtiDQIRVIErnceiphegpfcdlmwsdpedietwavsprgagwlfgsrvtsefnhinnLDLVCRAHQLVQEGLKYMFqdkglvtvwsapnycyrcgnvASILSFNENMEREVKFFTEteennqmrgprtgvpyfl
MYQRQITYLCLEVFTILLLLKARYPANITllrgnhesrqLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFteteennqmrgprtgvpyfl
MYQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
****QITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFF********************
*YQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKF**************T*VPYFL
MYQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
*YQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEE*****GPRTG*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYQRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query227 2.2.26 [Sep-21-2011]
Q8LSN3303 Phytochrome-associated se N/A no 0.969 0.726 0.990 1e-128
Q9SX52303 Phytochrome-associated se yes no 0.969 0.726 0.968 1e-127
Q9LHE7303 Phytochrome-associated se yes no 0.969 0.726 0.968 1e-127
Q9U9A3305 Serine/threonine-protein yes no 0.960 0.714 0.740 1e-95
O00743305 Serine/threonine-protein no no 0.964 0.718 0.709 1e-92
Q64620305 Serine/threonine-protein yes no 0.964 0.718 0.709 1e-92
Q9CQR6305 Serine/threonine-protein yes no 0.964 0.718 0.709 1e-92
P36614305 Serine/threonine-protein yes no 0.969 0.721 0.678 3e-91
Q27884303 Serine/threonine-protein yes no 0.964 0.722 0.663 6e-84
P20604311 Serine/threonine-protein yes no 0.907 0.662 0.645 1e-82
>sp|Q8LSN3|FYPP_PEA Phytochrome-associated serine/threonine-protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1 Back     alignment and function desciption
 Score =  458 bits (1179), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/220 (99%), Positives = 218/220 (99%)

Query: 8   YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
           Y  LEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF
Sbjct: 84  YNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 143

Query: 68  DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
           DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA
Sbjct: 144 DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 203

Query: 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
           VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC
Sbjct: 204 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 263

Query: 188 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227
           GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
Sbjct: 264 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 303
Dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms. Plays a major role in the photoperiodic control of flowering time in long days by modulating phytochrome signals in flowering time control.
Pisum sativum (taxid: 3888)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SX52|FYPP1_ARATH Phytochrome-associated serine/threonine-protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHE7|FYPP3_ARATH Phytochrome-associated serine/threonine-protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1 Back     alignment and function description
>sp|Q9U9A3|PPP6_DICDI Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2 Back     alignment and function description
>sp|O00743|PPP6_HUMAN Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1 Back     alignment and function description
>sp|Q64620|PPP6_RAT Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus GN=Ppp6c PE=2 SV=2 Back     alignment and function description
>sp|Q9CQR6|PPP6_MOUSE Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus GN=Ppp6c PE=2 SV=1 Back     alignment and function description
>sp|P36614|PPE1_SCHPO Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppe1 PE=1 SV=1 Back     alignment and function description
>sp|Q27884|PPP6_DROME Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1 Back     alignment and function description
>sp|P20604|PP11_YEAST Serine/threonine-protein phosphatase PP1-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIT4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
357439041279 Serine/threonine protein phosphatase [Me 0.969 0.788 0.990 1e-127
224097404303 predicted protein [Populus trichocarpa] 0.969 0.726 0.990 1e-127
357439037303 Serine/threonine protein phosphatase [Me 0.969 0.726 0.990 1e-127
359484108303 PREDICTED: phytochrome-associated serine 0.969 0.726 0.986 1e-127
255544155303 protein phsophatase-2a, putative [Ricinu 0.969 0.726 0.986 1e-126
1143511303 Ser/Thr protein phosphatase homologous t 0.969 0.726 0.986 1e-126
358248164303 uncharacterized protein LOC100820006 [Gl 0.969 0.726 0.986 1e-126
356536471303 PREDICTED: phytochrome-associated serine 0.969 0.726 0.986 1e-126
356536469303 PREDICTED: phytochrome-associated serine 0.969 0.726 0.986 1e-126
449458730303 PREDICTED: phytochrome-associated serine 0.969 0.726 0.981 1e-126
>gi|357439041|ref|XP_003589797.1| Serine/threonine protein phosphatase [Medicago truncatula] gi|355478845|gb|AES60048.1| Serine/threonine protein phosphatase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  458 bits (1179), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/220 (99%), Positives = 218/220 (99%)

Query: 8   YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
           Y  LEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF
Sbjct: 60  YNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 119

Query: 68  DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
           DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA
Sbjct: 120 DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 179

Query: 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
           VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC
Sbjct: 180 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 239

Query: 188 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227
           GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL
Sbjct: 240 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 279

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224097404|ref|XP_002310919.1| predicted protein [Populus trichocarpa] gi|222850739|gb|EEE88286.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357439037|ref|XP_003589795.1| Serine/threonine protein phosphatase [Medicago truncatula] gi|75301808|sp|Q8LSN3.1|FYPP_PEA RecName: Full=Phytochrome-associated serine/threonine-protein phosphatase; AltName: Full=PsFyPP gi|20385063|gb|AAM21172.1|AF305635_1 serine/threonine protein phosphatase 2A [Pisum sativum] gi|355478843|gb|AES60046.1| Serine/threonine protein phosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|359484108|ref|XP_003633064.1| PREDICTED: phytochrome-associated serine/threonine protein phosphatase-like [Vitis vinifera] gi|297742721|emb|CBI35355.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544155|ref|XP_002513140.1| protein phsophatase-2a, putative [Ricinus communis] gi|223548151|gb|EEF49643.1| protein phsophatase-2a, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|1143511|emb|CAA87385.1| Ser/Thr protein phosphatase homologous to PPX [Malus x domestica] gi|1586034|prf||2202340A Ser/Thr protein phosphatase Back     alignment and taxonomy information
>gi|358248164|ref|NP_001239829.1| uncharacterized protein LOC100820006 [Glycine max] gi|255645547|gb|ACU23268.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356536471|ref|XP_003536761.1| PREDICTED: phytochrome-associated serine/threonine protein phosphatase-like [Glycine max] Back     alignment and taxonomy information
>gi|356536469|ref|XP_003536760.1| PREDICTED: phytochrome-associated serine/threonine protein phosphatase-like [Glycine max] Back     alignment and taxonomy information
>gi|449458730|ref|XP_004147100.1| PREDICTED: phytochrome-associated serine/threonine-protein phosphatase-like [Cucumis sativus] gi|449517066|ref|XP_004165567.1| PREDICTED: phytochrome-associated serine/threonine-protein phosphatase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query227
TAIR|locus:2011907303 FYPP1 "AT1G50370" [Arabidopsis 0.969 0.726 0.968 6e-119
TAIR|locus:2095380303 FYPP3 "AT3G19980" [Arabidopsis 0.969 0.726 0.968 7.7e-119
DICTYBASE|DDB_G0272118305 ppp6c "protein phosphatase 6 c 0.955 0.711 0.744 1.2e-90
UNIPROTKB|F1NZJ8308 PPP6C "Serine/threonine-protei 0.964 0.711 0.709 6.7e-88
UNIPROTKB|F1P1S8281 PPP6C "Serine/threonine-protei 0.964 0.779 0.709 6.7e-88
UNIPROTKB|Q2KIC7305 PPP6C "Serine/threonine-protei 0.964 0.718 0.709 8.6e-88
UNIPROTKB|O00743305 PPP6C "Serine/threonine-protei 0.964 0.718 0.709 8.6e-88
UNIPROTKB|F2Z5N6305 PPP6C "Serine/threonine-protei 0.964 0.718 0.709 8.6e-88
MGI|MGI:1915107305 Ppp6c "protein phosphatase 6, 0.964 0.718 0.709 8.6e-88
RGD|708460305 Ppp6c "protein phosphatase 6, 0.964 0.718 0.709 8.6e-88
TAIR|locus:2011907 FYPP1 "AT1G50370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
 Identities = 213/220 (96%), Positives = 218/220 (99%)

Query:     8 YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
             Y  LEVFTILLLLKAR+PANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF
Sbjct:    84 YNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 143

Query:    68 DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
             DYLTLSAIIDGTVLCVHGGLSPD+RTIDQIR+IERNCEIPHEGPFCDLMWSDPEDIETWA
Sbjct:   144 DYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRLIERNCEIPHEGPFCDLMWSDPEDIETWA 203

Query:   128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
             VSPRGAGWLFGSRVT+EFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC
Sbjct:   204 VSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 263

Query:   188 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227
             GNVASILSFN+NMEREVKFFTETEENNQMRGPRTGVPYFL
Sbjct:   264 GNVASILSFNDNMEREVKFFTETEENNQMRGPRTGVPYFL 303
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
TAIR|locus:2095380 FYPP3 "AT3G19980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0272118 ppp6c "protein phosphatase 6 catalytic subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZJ8 PPP6C "Serine/threonine-protein phosphatase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1S8 PPP6C "Serine/threonine-protein phosphatase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KIC7 PPP6C "Serine/threonine-protein phosphatase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O00743 PPP6C "Serine/threonine-protein phosphatase 6 catalytic subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5N6 PPP6C "Serine/threonine-protein phosphatase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1915107 Ppp6c "protein phosphatase 6, catalytic subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|708460 Ppp6c "protein phosphatase 6, catalytic subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P36614PPE1_SCHPO3, ., 1, ., 3, ., 1, 60.67870.96910.7213yesno
Q9LHE7FYPP3_ARATH3, ., 1, ., 3, ., 1, 60.96810.96910.7260yesno
Q27884PPP6_DROME3, ., 1, ., 3, ., 1, 60.66360.96470.7227yesno
Q9SX52FYPP1_ARATH3, ., 1, ., 3, ., 1, 60.96810.96910.7260yesno
Q64620PPP6_RAT3, ., 1, ., 3, ., 1, 60.70900.96470.7180yesno
P20604PP11_YEAST3, ., 1, ., 3, ., 1, 60.64560.90740.6623yesno
Q9XW79PP4C1_CAEEL3, ., 1, ., 3, ., 1, 60.59450.96470.6576yesno
Q8LSN3FYPP_PEA3, ., 1, ., 3, ., 1, 60.99090.96910.7260N/Ano
Q9U9A3PPP6_DICDI3, ., 1, ., 3, ., 1, 60.74090.96030.7147yesno
Q9CQR6PPP6_MOUSE3, ., 1, ., 3, ., 1, 60.70900.96470.7180yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.979
3rd Layer3.1.30.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_VIII0018
hypothetical protein (303 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
cd07415285 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos 1e-139
PTZ00239303 PTZ00239, PTZ00239, serine/threonine protein phosp 1e-135
smart00156271 smart00156, PP2Ac, Protein phosphatase 2A homologu 1e-87
cd07414293 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li 4e-71
PTZ00480320 PTZ00480, PTZ00480, serine/threonine-protein phosp 9e-59
cd07417316 cd07417, MPP_PP5_C, PP5, C-terminal metallophospha 1e-55
cd07416305 cd07416, MPP_PP2B, PP2B, metallophosphatase domain 2e-54
PTZ00244294 PTZ00244, PTZ00244, serine/threonine-protein phosp 4e-51
cd00144225 cd00144, MPP_PPP_family, phosphoprotein phosphatas 4e-46
cd07419311 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho 2e-43
COG0639155 COG0639, ApaH, Diadenosine tetraphosphatase and re 2e-35
cd07420321 cd07420, MPP_RdgC, Drosophila melanogaster RdgC an 3e-27
cd07418377 cd07418, MPP_PP7, PP7, metallophosphatase domain 4e-24
pfam00149185 pfam00149, Metallophos, Calcineurin-like phosphoes 4e-15
>gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information 
 Score =  389 bits (1002), Expect = e-139
 Identities = 138/200 (69%), Positives = 161/200 (80%), Gaps = 1/200 (0%)

Query: 8   YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
           Y  +E F +LL LK RYP  ITLLRGNHESRQ+TQVYGFYDEC RKYGNAN W+YCTD+F
Sbjct: 83  YYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLF 142

Query: 68  DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
           DYL L+A+ID  + CVHGGLSP I T+DQIR I+R  E+PHEGP CDL+WSDP+DIE W 
Sbjct: 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWG 202

Query: 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
           +SPRGAG+LFG  V  EFNH N L L+CRAHQLV EG ++MF D  LVTVWSAPNYCYRC
Sbjct: 203 ISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMF-DDKLVTVWSAPNYCYRC 261

Query: 188 GNVASILSFNENMEREVKFF 207
           GNVASI+  +E+++R  K F
Sbjct: 262 GNVASIMELDEHLKRSFKVF 281

PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285
>gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 227
KOG0372303 consensus Serine/threonine specific protein phosph 100.0
KOG0373306 consensus Serine/threonine specific protein phosph 100.0
PTZ00239303 serine/threonine protein phosphatase 2A; Provision 100.0
cd07415285 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein 100.0
PTZ00480320 serine/threonine-protein phosphatase; Provisional 100.0
cd07420321 MPP_RdgC Drosophila melanogaster RdgC and related 100.0
KOG0374331 consensus Serine/threonine specific protein phosph 100.0
cd07417316 MPP_PP5_C PP5, C-terminal metallophosphatase domai 100.0
PTZ00244294 serine/threonine-protein phosphatase PP1; Provisio 100.0
cd07414293 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme 100.0
KOG0371319 consensus Serine/threonine protein phosphatase 2A, 100.0
smart00156271 PP2Ac Protein phosphatase 2A homologues, catalytic 100.0
cd07416305 MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca 100.0
KOG0375 517 consensus Serine-threonine phosphatase 2B, catalyt 100.0
cd07419311 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a 100.0
cd07418377 MPP_PP7 PP7, metallophosphatase domain. PP7 is a p 100.0
KOG0377 631 consensus Protein serine/threonine phosphatase RDG 100.0
KOG0376476 consensus Serine-threonine phosphatase 2A, catalyt 100.0
cd00144225 MPP_PPP_family phosphoprotein phosphatases of the 99.95
cd07425208 MPP_Shelphs Shewanella-like phosphatases, metallop 99.6
PRK13625245 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision 99.55
cd07413222 MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat 99.38
cd07423234 MPP_PrpE Bacillus subtilis PrpE and related protei 99.37
cd07424207 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do 99.37
cd07422257 MPP_ApaH Escherichia coli ApaH and related protein 99.34
COG0639155 ApaH Diadenosine tetraphosphatase and related seri 99.34
PRK00166275 apaH diadenosine tetraphosphatase; Reviewed 99.31
cd07421304 MPP_Rhilphs Rhilph phosphatases, metallophosphatas 99.29
PHA02239235 putative protein phosphatase 99.25
TIGR00668279 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric 99.21
PRK11439218 pphA serine/threonine protein phosphatase 1; Provi 99.04
PRK09968218 serine/threonine-specific protein phosphatase 2; P 98.84
PF00149200 Metallophos: Calcineurin-like phosphoesterase; Int 97.86
cd07397238 MPP_DevT Myxococcus xanthus DevT and related prote 97.23
cd00841155 MPP_YfcE Escherichia coli YfcE and related protein 95.84
cd00838131 MPP_superfamily metallophosphatase superfamily, me 95.69
TIGR00040158 yfcE phosphoesterase, MJ0936 family. Members of th 95.18
KOG0918 476 consensus Selenium-binding protein [Inorganic ion 95.04
cd07379135 MPP_239FB Homo sapiens 239FB and related proteins, 94.41
cd07394178 MPP_Vps29 Homo sapiens Vps29 and related proteins, 94.17
cd07404166 MPP_MS158 Microscilla MS158 and related proteins, 93.82
PF12850156 Metallophos_2: Calcineurin-like phosphoesterase su 93.74
cd07403129 MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel 93.65
cd07400144 MPP_YydB Bacillus subtilis YydB and related protei 93.35
cd07399214 MPP_YvnB Bacillus subtilis YvnB and related protei 93.13
PF06874640 FBPase_2: Firmicute fructose-1,6-bisphosphatase; I 92.47
KOG0376 476 consensus Serine-threonine phosphatase 2A, catalyt 91.49
cd07395262 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, 88.81
COG0622172 Predicted phosphoesterase [General function predic 85.72
cd08163257 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related 82.48
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=2.9e-77  Score=498.32  Aligned_cols=224  Identities=58%  Similarity=1.155  Sum_probs=216.6

Q ss_pred             ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178            3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC   82 (227)
Q Consensus         3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc   82 (227)
                      .||||.+|+|++++|++||++||++|+|||||||++.++..|||++||.+|||+..+|+.++++|++||+||+|+++|||
T Consensus        79 yVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifC  158 (303)
T KOG0372|consen   79 YVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFC  158 (303)
T ss_pred             hhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEE
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCCCCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178           83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ  162 (227)
Q Consensus        83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~  162 (227)
                      ||||+||.++++++|+.+.|.+++|+++.++|+|||||.+.++|.-||||+|++||++++++|++.||+++|.|+||.|.
T Consensus       159 VHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~  238 (303)
T KOG0372|consen  159 VHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVM  238 (303)
T ss_pred             EcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecccccCC-CCCCCCCCCCCC
Q 027178          163 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQ-MRGPRTGVPYFL  227 (227)
Q Consensus       163 ~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  227 (227)
                      +||++.| +++++|||||||||++++|.||+|+|+++....|..|++.|..+. ....+.+.+|||
T Consensus       239 eGyk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl  303 (303)
T KOG0372|consen  239 EGYKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL  303 (303)
T ss_pred             hhHHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence            9999999 999999999999999999999999999999999999999998854 444566779996

>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] Back     alignment and domain information
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information
>PTZ00480 serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] Back     alignment and domain information
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>cd07416 MPP_PP2B PP2B, metallophosphatase domain Back     alignment and domain information
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] Back     alignment and domain information
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>cd07418 MPP_PP7 PP7, metallophosphatase domain Back     alignment and domain information
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain Back     alignment and domain information
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional Back     alignment and domain information
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain Back     alignment and domain information
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain Back     alignment and domain information
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed Back     alignment and domain information
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain Back     alignment and domain information
>PHA02239 putative protein phosphatase Back     alignment and domain information
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Back     alignment and domain information
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional Back     alignment and domain information
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional Back     alignment and domain information
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 Back     alignment and domain information
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>TIGR00040 yfcE phosphoesterase, MJ0936 family Back     alignment and domain information
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain Back     alignment and domain information
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] Back     alignment and domain information
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain Back     alignment and domain information
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] Back     alignment and domain information
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] Back     alignment and domain information
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG0622 Predicted phosphoesterase [General function prediction only] Back     alignment and domain information
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
2ie3_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 7e-71
3c5w_C310 Complex Between Pp2a-Specific Methylesterase Pme-1 7e-71
3fga_C309 Structural Basis Of Pp2a And Sgo Interaction Length 7e-71
2ie4_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 7e-71
2iae_C309 Crystal Structure Of A Protein Phosphatase 2a (Pp2a 2e-70
3p71_C304 Crystal Structure Of The Complex Of Lcmt-1 And Pp2a 2e-70
2nyl_C293 Crystal Structure Of Protein Phosphatase 2a (Pp2a) 2e-70
1fjm_A330 Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor 4e-51
4g9j_A331 Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P 5e-51
3egg_A329 Crystal Structure Of A Complex Between Protein Phos 6e-51
3v4y_A306 Crystal Structure Of The First Nuclear Pp1 Holoenzy 1e-50
3n5u_B300 Crystal Structure Of An Rb C-Terminal Peptide Bound 4e-50
3e7a_A299 Crystal Structure Of Protein Phosphatase-1 Bound To 6e-50
1jk7_A323 Crystal Structure Of The Tumor-Promoter Okadaic Aci 9e-50
2o8a_A329 Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng 9e-50
1s70_A330 Complex Between Protein Ser/thr Phosphatase-1 (delt 6e-49
1u32_A293 Crystal Structure Of A Protein Phosphatase-1: Calci 4e-48
1wao_1477 Pp5 Structure Length = 477 2e-37
1s95_A333 Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 2e-37
3h60_A315 Catalytic Domain Of Human SerineTHREONINE PHOSPHATA 3e-37
1aui_A 521 Human Calcineurin Heterodimer Length = 521 3e-33
2jog_A327 Structure Of The Calcineurin-Nfat Complex Length = 4e-33
2p6b_A383 Crystal Structure Of Human Calcineurin In Complex W 4e-33
3ll8_A357 Crystal Structure Of Calcineurin In Complex With Ak 4e-33
1m63_A372 Crystal Structure Of Calcineurin-Cyclophilin-Cyclos 4e-33
1tco_A375 Ternary Complex Of A Calcineurin A Fragment, Calcin 4e-33
1mf8_A373 Crystal Structure Of Human Calcineurin Complexed Wi 4e-33
3icf_A335 Structure Of Protein SerineTHREONINE PHOSPHATASE FR 7e-29
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  263 bits (672), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 120/220 (54%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 8   YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
           Y  +E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+F
Sbjct: 91  YYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLF 150
Query: 68  DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
           DYL L+A++DG + C+HGGLSP I T+D IR ++R  E+PHEGP CDL+WSDP+D   W 
Sbjct: 151 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWG 210
Query: 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
           +SPRGAG+ FG  ++  FNH N L LV RAHQLV EG  +   D+ +VT++SAPNYCYRC
Sbjct: 211 ISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRC 269
Query: 188 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227
           GN A+I+  ++ ++     F       +    R    YFL
Sbjct: 270 GNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 Back     alignment and structure
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 Back     alignment and structure
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 Back     alignment and structure
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 Back     alignment and structure
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 Back     alignment and structure
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 Back     alignment and structure
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 Back     alignment and structure
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 Back     alignment and structure
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 Back     alignment and structure
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 Back     alignment and structure
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 Back     alignment and structure
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 Back     alignment and structure
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 Back     alignment and structure
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 Back     alignment and structure
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 Back     alignment and structure
>pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 Back     alignment and structure
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 Back     alignment and structure
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 Back     alignment and structure
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 Back     alignment and structure
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 Back     alignment and structure
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 Back     alignment and structure
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 Back     alignment and structure
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 Back     alignment and structure
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 Back     alignment and structure
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 Back     alignment and structure
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query227
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 1e-142
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 1e-130
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 1e-128
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 1e-127
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 1e-125
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 1e-125
3ll8_A357 Serine/threonine-protein phosphatase 2B catalytic 1e-122
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 1e-122
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 8e-08
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 Back     alignment and structure
 Score =  397 bits (1023), Expect = e-142
 Identities = 119/220 (54%), Positives = 152/220 (69%), Gaps = 1/220 (0%)

Query: 8   YLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVF 67
           Y  +E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+F
Sbjct: 91  YYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLF 150

Query: 68  DYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 127
           DYL L+A++DG + C+HGGLSP I T+D IR ++R  E+PHEGP CDL+WSDP+D   W 
Sbjct: 151 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWG 210

Query: 128 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC 187
           +SPRGAG+ FG  ++  FNH N L LV RAHQLV EG  +      +VT++SAPNYCYRC
Sbjct: 211 ISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRN-VVTIFSAPNYCYRC 269

Query: 188 GNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 227
           GN A+I+  ++ ++     F       +    R    YFL
Sbjct: 270 GNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 Back     alignment and structure
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 Back     alignment and structure
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 100.0
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 100.0
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 100.0
3ll8_A357 Serine/threonine-protein phosphatase 2B catalytic 100.0
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 100.0
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 100.0
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 100.0
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 100.0
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 99.97
2dfj_A280 Diadenosinetetraphosphatase; helices and strands m 99.88
2qjc_A262 Diadenosine tetraphosphatase, putative; putative d 99.53
1g5b_A221 Serine/threonine protein phosphatase; bacteriophag 99.2
1nnw_A252 Hypothetical protein; structural genomics, PSI, pr 98.76
3rqz_A246 Metallophosphoesterase; PSI-biology, midwest cente 98.51
3qfm_A270 SAPH, putative uncharacterized protein; sandwich f 98.09
3ck2_A176 Conserved uncharacterized protein (predicted phosp 95.2
2a22_A215 Vacuolar protein sorting 29; alpha-beta-BETA-alpha 95.04
1xm7_A195 Hypothetical protein AQ_1665; structural genomics, 95.0
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phos 94.71
1s3l_A190 Hypothetical protein MJ0936; phosphodiesterase, nu 94.17
2xmo_A443 LMO2642 protein; phosphodiesterase, hydrolase; 1.7 92.57
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fo 91.61
2kkn_A178 Uncharacterized protein; protein phosphatase 2A ho 89.09
1su1_A208 Hypothetical protein YFCE; structural genomics, ph 87.69
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metall 85.1
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 83.78
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Back     alignment and structure
Probab=100.00  E-value=4e-65  Score=446.78  Aligned_cols=206  Identities=42%  Similarity=0.892  Sum_probs=200.6

Q ss_pred             ccCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEE
Q 027178            3 QRQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLC   82 (227)
Q Consensus         3 ~vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilc   82 (227)
                      +||||++|+||+.+|++||+.+|++|++||||||.+.++..|||++||..+| +..+|+.+.++|++||++|++++++||
T Consensus        92 ~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky-~~~l~~~~~~~f~~LPlaaii~~~il~  170 (299)
T 3e7a_A           92 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFC  170 (299)
T ss_dssp             CSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTCCCEEEETTTEEE
T ss_pred             ccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHh-hHHHHHHHHHHHhhCCceEEECCeEEE
Confidence            5899999999999999999999999999999999999999999999999999 789999999999999999999999999


Q ss_pred             eecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCC-CCCCcccCCCCceeecChhhHHhhhhhcCceEEEecccee
Q 027178           83 VHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV  161 (227)
Q Consensus        83 vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~  161 (227)
                      |||||+|.+.++++|++|.||.+.|.+++++|+|||||. +..+|.+|+||.|+.||++++++||++|++++||||||++
T Consensus       171 vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v  250 (299)
T 3e7a_A          171 CHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVV  250 (299)
T ss_dssp             ESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCC
T ss_pred             EcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHHHHHCCCeEEEEcCeee
Confidence            999999999999999999999999999999999999999 4789999999999999999999999999999999999999


Q ss_pred             ecceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178          162 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET  210 (227)
Q Consensus       162 ~~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~  210 (227)
                      ++||++.+ +++|||||||||||+.++|+||+|.+++++.++|.+|+|.
T Consensus       251 ~~Gy~~~~-~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~  298 (299)
T 3e7a_A          251 EDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  298 (299)
T ss_dssp             TTSEEEET-TTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred             ecceEEec-CCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence            99999977 9999999999999999999999999999999999999985
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Back     alignment and structure
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Back     alignment and structure
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Back     alignment and structure
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Back     alignment and structure
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Back     alignment and structure
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 Back     alignment and structure
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 Back     alignment and structure
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 Back     alignment and structure
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A Back     alignment and structure
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A Back     alignment and structure
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Back     alignment and structure
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} Back     alignment and structure
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 227
d3c5wc1288 d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt 3e-80
d1jk7a_294 d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human 5e-77
d1s95a_324 d.159.1.3 (A:) Serine/threonine protein phosphatas 6e-75
d1auia_ 473 d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc 2e-74
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  239 bits (612), Expect = 3e-80
 Identities = 115/198 (58%), Positives = 148/198 (74%), Gaps = 1/198 (0%)

Query: 10  CLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDY 69
            +E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDY
Sbjct: 88  SVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 147

Query: 70  LTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVS 129
           L L+A++DG + C+HGGLSP I T+D IR ++R  E+PHEGP CDL+WSDP+D   W +S
Sbjct: 148 LPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGIS 207

Query: 130 PRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGN 189
           PRGAG+ FG  ++  FNH N L LV RAHQLV EG  +   D+ +VT++SAPNYCYRCGN
Sbjct: 208 PRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH-DRNVVTIFSAPNYCYRCGN 266

Query: 190 VASILSFNENMEREVKFF 207
            A+I+  ++ ++     F
Sbjct: 267 QAAIMELDDTLKYSFLQF 284
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query227
d1jk7a_294 Protein phosphatase-1 (PP-1) {Human (Homo sapiens) 100.0
d3c5wc1288 Protein phosphatase 2A catalytic subunit alpha iso 100.0
d1s95a_324 Serine/threonine protein phosphatase 5, PP5 {Human 100.0
d1auia_ 473 Protein phosphatase-2B (PP-2B, calcineurin A subun 100.0
d1g5ba_219 lambda ser/thr protein phosphatase {Bacteriophage 99.08
d1nnwa_251 Hypothetical protein PF1291 {Archaeon Pyrococcus f 98.83
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus 94.89
d2a22a1193 Vacuolar protein sorting 29, VPS29 {Cryptosporidiu 94.41
d1z2wa1182 Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus 92.6
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aeroge 89.34
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneu 89.31
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus 84.86
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycoba 80.58
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-1 (PP-1)
species: Human (Homo sapiens), beta isoform [TaxId: 9606]

Probab=100.00  E-value=4.5e-70  Score=474.79  Aligned_cols=205  Identities=41%  Similarity=0.885  Sum_probs=199.8

Q ss_pred             cCCCCCcHHHHHHHHHHHHhCCCcEEEeccCCcCccccccCCcHHHHHHHhCChhHHHHHHHHHhhhhhheeecCeEEEe
Q 027178            4 RQITYLCLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCV   83 (227)
Q Consensus         4 vDRG~~s~Evl~~L~~LK~~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~~g~~~~~~~~~~~f~~LPlaaii~~~ilcv   83 (227)
                      ||||++|+||+++|++||++||++|+|||||||++.++..|||++||..+| ..++|+.++++|++||+||+|+++||||
T Consensus        89 VDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y-~~~i~~~~~~~F~~LPlaalI~~~i~cv  167 (294)
T d1jk7a_          89 VDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCC  167 (294)
T ss_dssp             SSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHS-CHHHHHHHHHHHTTCCCEEEETTTEEEE
T ss_pred             cCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccccccccchhHHHhhc-CHHHHHHHHHHHhhCceeeEEcCeEEEe
Confidence            799999999999999999999999999999999999999999999999999 6689999999999999999999999999


Q ss_pred             ecCcCCCCCCHhhhhhhhcccCCCCCCcccccccCCCCC-CCCcccCCCCceeecChhhHHhhhhhcCceEEEeccceee
Q 027178           84 HGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQ  162 (227)
Q Consensus        84 HgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dlLWsDP~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~l~~iIRgHe~~~  162 (227)
                      ||||+|.+.++++|++++||.+.+.++++.|+|||||.+ ..+|.+++||.|+.||++++++||++||+++||||||+++
T Consensus       168 HGGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~RG~g~~fg~~~~~~Fl~~n~l~~IIR~He~~~  247 (294)
T d1jk7a_         168 HGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVE  247 (294)
T ss_dssp             SSCCCTTCCCHHHHHTCCSSCCCCSSSHHHHHHHCEECSSCSSEEECTTSSSEEECHHHHHHHHHHTTCSEEEECCSCCT
T ss_pred             cCcccCCccchhhhhhccCCCCCCCcchhhhhhhcCCccccCCCCCCCCCCccccCHHHHHHHHHHCCCCEEEEcCcccc
Confidence            999999999999999999999999999999999999994 6789999999999999999999999999999999999999


Q ss_pred             cceeeEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceEEEEeecc
Q 027178          163 EGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET  210 (227)
Q Consensus       163 ~G~~~~~~~~~~iTifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~  210 (227)
                      +||++.+ +++|+||||||+||+.++|+||+|.|+++++++|.+|+|+
T Consensus       248 ~G~~~~~-~~~viTiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~  294 (294)
T d1jk7a_         248 DGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  294 (294)
T ss_dssp             TSEEEET-TTTEEEEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred             CCcEEec-CCcEEEEecCCCcCCCCCccEEEEEECCCCcEeEEEecCC
Confidence            9999988 9999999999999999999999999999999999999985
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Back     information, alignment and structure
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure