Citrus Sinensis ID: 027180

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV
ccccccccccccccccccccccccccccccEEEccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEEEEccCEEEEEcccccccccccccccccccccccEEEcccccccccccHHHHHHHccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccc
*******PKT***************VSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQ*******
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MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQIDAALEQGVEAVRTLVLNGFDQNISRFNMGQKYKYHAV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic Required for the splicing of group IIB introns in chloroplasts.probableQ9FKN4
Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic Required for the splicing of group IIB introns in chloroplasts.probableQ5ZCL8
Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic Required for the splicing of group IIB introns in chloroplasts. Forms complexes with either CAF1 or CAF2 which, in turn, interact with RNA and confer intron specificity of the splicing particles. Has no peptidyl-tRNA hydrolase activity.probableQ9M5P4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.29Aminoacyl-tRNA hydrolase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RYB, chain A
Confidence level:very confident
Coverage over the Query: 47-220
View the alignment between query and template
View the model in PyMOL