Citrus Sinensis ID: 027187

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
MGSNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPLQKPSTDFSDFIF
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHcccccccccccHHccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHccccEEEEEEEEccccccccEEEEEcccccccccccccccccccccccEEEEcccEEEEEEccccccccHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHccc
Coil and Loop (DISEMBL)
mgsnmrticrphmvFTSLISCRDQARSFIkvsfrspnyrprlsswfgfrelnrteswfrvNQRRTVVSaanwadekspyetlelerDADEEQIKVAYRRLAkfyhpdvydgrgtlekgeTAEAKFIKIQAAYELLIDEERRRQydmdnrvnpmkASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLlplqkpstdfsdfif
Flexible Loop (DISEMBL)
mgsnmrticrphmVFTSLISCRDQARSFikvsfrspnyrprlsswfgfrelnrteswfrvnqrrtvvsaanwadekspyetlelerdadEEQIKVAYRrlakfyhpdvydgrgtlekgetaeaKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLValllplqkpstdfsdfif
Low Complexity Region (SEG)
MGSNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPLQKPSTDFSDFIF
Disordered region (IsUnstruct)
******TICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADE***************EQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERR**Y********MKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPL************
Disordered Region (DISOPRED)
**********PHMVFTSLI******************YRPRLSSWF**************************ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRG********EAKFIKIQAAYELLIDEERRRQYDMDNRVN************IKKRKAFDQRGDMAIA****************************LVA*LLPLQKPSTDFSDFIF
Disordered Region (DISEMBL)
MGSNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPLQKPSTDFSDFIF
Disordered Region (DISPRO)
****MRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPLQKPSTDFS*FIF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVNQRRTVVSAANWADEKSPxxxxxxxxxxxxxxxxxxxxxLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRARRLSRSKHLKTLSRLVALLLPLQKPSTDFSDFIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
B0S1F7	372	Chaperone protein DnaJ OS	yes	no	0.286	0.174	0.492	1e-11
A5UYW4	370	Chaperone protein DnaJ OS	yes	no	0.308	0.189	0.454	2e-10
A7NS65	370	Chaperone protein DnaJ OS	yes	no	0.308	0.189	0.454	2e-10
Q75VW3	356	Chaperone protein DnaJ OS	yes	no	0.343	0.219	0.423	2e-10
A4XKA5	387	Chaperone protein DnaJ OS	yes	no	0.295	0.173	0.506	2e-10
B8I304	379	Chaperone protein DnaJ OS	yes	no	0.299	0.179	0.445	3e-10
A9VHU0	368	Chaperone protein DnaJ OS	yes	no	0.295	0.182	0.472	3e-10
C4Z1J3	375	Chaperone protein DnaJ OS	yes	no	0.299	0.181	0.472	5e-10
B9MJZ0	388	Chaperone protein DnaJ OS	yes	no	0.299	0.175	0.5	5e-10
Q8YUA5	376	Chaperone protein DnaJ OS	yes	no	0.325	0.196	0.452	5e-10

>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328) GN=dnaJ PE=3 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 6/71 (8%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K+ YE LE+  +A +E+IK +YRRLAK YHPD+  G         AE KF +I  AYE+L
Sbjct: 2   KNLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGD------SEAENKFKEINGAYEVL 55

Query: 136 IDEERRRQYDM 146
            D+E+R++YDM
Sbjct: 56  GDKEKRKKYDM 66

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Finegoldia magna (strain ATCC 29328) (taxid: 334413)

>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++R+A +++IK A+RRLA+ YHPDV        K   AEAKF +I  AYE+L D 
Sbjct: 8   YEVLGVQRNASQDEIKKAFRRLARQYHPDV-------NKAPDAEAKFKEINEAYEVLSDP 60

Query: 139 ERRRQYDMDNRVNPMKA 155
           E+R  YD      P  A
Sbjct: 61  EKRSMYDRFGHAGPTAA 77

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Roseiflexus sp. (strain RS-1) (taxid: 357808)

>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++R+A +++IK A+RRLA+ YHPDV        K   AEAKF +I  AYE+L D 
Sbjct: 8   YEVLGVQRNASQDEIKKAFRRLARQYHPDV-------NKAPDAEAKFKEINEAYEVLSDP 60

Query: 139 ERRRQYDMDNRVNPMKA 155
           E+R  YD      P  A
Sbjct: 61  EKRSMYDRFGHAGPTAA 77

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Roseiflexus castenholzii (strain DSM 13941 / HLO8) (taxid: 383372)

>sp|Q75VW3|DNAJ_HYDTT Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 7/85 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + +DA  E+IK AYRRLAK YHPD+          E A  KF +I  AY +L DE
Sbjct: 7   YQILGVSKDATAEEIKKAYRRLAKEYHPDI-------SADENASEKFKEINEAYHILSDE 59

Query: 139 ERRRQYDMDNRVNPMKASQAWMEWL 163
           ERR++YD   +    K+ + +ME++
Sbjct: 60  ERRKEYDRILKSGDEKSYRDFMEYI 84

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) (taxid: 608538)

>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           A +K  YE L + R+A +E+IK AYRRLAK YHPD   G       + AE KF +I  AY
Sbjct: 2   AQKKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGN------KEAEEKFKEINEAY 55

Query: 133 ELLIDEERRRQYD 145
           E+L D E+RR+YD
Sbjct: 56  EVLSDPEKRRKYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) (taxid: 351627)

>sp|B8I304|DNAJ_CLOCE Chaperone protein DnaJ OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaJ PE=3 SV=1

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 6/74 (8%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
            AD++  YE L ++++A + ++K AYR LAK YHPDV  G        TAEAKF ++  A
Sbjct: 1   MADKRDYYEVLGVDKNASDAELKKAYRNLAKKYHPDVNPGD------TTAEAKFKEVNEA 54

Query: 132 YELLIDEERRRQYD 145
           YE+L D ++R +YD
Sbjct: 55  YEILSDSQKRSRYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) (taxid: 394503)

>sp|A9VHU0|DNAJ_BACWK Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1

 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 7/74 (9%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L L + A +++IK AYRRLAK YHPDV        K E A  KF ++Q AYE+L D+
Sbjct: 7   YEVLGLSQGASKDEIKKAYRRLAKKYHPDV-------SKEENAIEKFKEVQEAYEVLSDD 59

Query: 139 ERRRQYDMDNRVNP 152
           ++R QYD      P
Sbjct: 60  QKRAQYDQFGHAGP 73

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

>sp|C4Z1J3|DNAJ_EUBE2 Chaperone protein DnaJ OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaJ PE=3 SV=1

 Score = 64.7 bits (156), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 6/74 (8%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
            AD++  YE L + +DAD+  IK AYR+LAK YHPD+  G       + AE KF +   A
Sbjct: 1   MADKRDYYEVLGVPKDADDAAIKKAYRQLAKKYHPDMNPGD------KEAEIKFKEASEA 54

Query: 132 YELLIDEERRRQYD 145
           Y +L D E+RRQYD
Sbjct: 55  YAVLSDAEKRRQYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Eubacterium eligens (strain ATCC 27750 / VPI C15-48) (taxid: 515620)

>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1

 Score = 64.7 bits (156), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 6/74 (8%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
            A +K  YE L + R+A EE+IK AYRRLAK YHPD   G       + AE KF +I  A
Sbjct: 1   MAQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGN------KEAEEKFKEINEA 54

Query: 132 YELLIDEERRRQYD 145
           YE+L D E+R+ YD
Sbjct: 55  YEVLSDPEKRKLYD 68

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Anaerocellum thermophilum (strain DSM 6725 / Z-1320) (taxid: 521460)

>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dnaJ PE=3 SV=1

 Score = 64.7 bits (156), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 10/84 (11%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + RDAD+E+IK AYRRLA+ YHPDV        K   AE +F +I  AYE+L + 
Sbjct: 6   YEILGVARDADKEEIKQAYRRLARKYHPDV-------NKEPGAEERFKEINRAYEVLSEP 58

Query: 139 ERRRQYDMDNRVNPMKASQAWMEW 162
           E R +YD   R  P   S A + +
Sbjct: 59  ETRARYD---RFGPEGVSGAGVGF 79

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
388516749	268	unknown [Lotus japonicus]	0.859	0.727	0.771	3e-82
225459417	272	PREDICTED: uncharacterized protein LOC10	0.854	0.713	0.743	8e-82
297839657	272	hypothetical protein ARALYDRAFT_476957 [	0.872	0.727	0.733	1e-81
356515831	268	PREDICTED: uncharacterized protein LOC10	0.859	0.727	0.78	2e-81
18411751	271	chaperone DnaJ-domain-containing protein	0.867	0.726	0.718	5e-80
224066897	276	predicted protein [Populus trichocarpa]	0.854	0.702	0.717	1e-75
449511575	271	PREDICTED: uncharacterized LOC101214898	0.867	0.726	0.712	1e-74
255545582	256	chaperone protein DNAj, putative [Ricinu	0.801	0.710	0.775	8e-72
388491678	271	unknown [Medicago truncatula]	0.859	0.719	0.682	9e-72
449458087	268	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.854	0.723	0.698	3e-71

>gi|388516749|gb|AFK46436.1| unknown [Lotus japonicus]

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/201 (77%), Positives = 171/201 (85%), Gaps = 6/201 (2%)

Query: 3   SNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFREL---NRTESWFR 59
           SN+RT+CR H VF S ISCR Q RS  +  FR+PN++P L S   +      +RT  WFR
Sbjct: 2   SNLRTLCRSHTVF-SFISCRHQFRS--RALFRNPNWKPSLQSPSLYSTCLGSSRTVPWFR 58

Query: 60  VNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGE 119
           VNQRRTV  A+ W +EKSPYETLELERDADEEQIK+AYRRLAKFYHPDVYDGRGTLE+GE
Sbjct: 59  VNQRRTVTKASKWDEEKSPYETLELERDADEEQIKIAYRRLAKFYHPDVYDGRGTLEEGE 118

Query: 120 TAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIA 179
           TAEA+FIKIQAAYELLIDEE RR+YDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIA
Sbjct: 119 TAEARFIKIQAAYELLIDEETRRKYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIA 178

Query: 180 AWAEQQQLELNLRARRLSRSK 200
           AWAEQQQ ELN+R R+LSRSK
Sbjct: 179 AWAEQQQRELNIRVRQLSRSK 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459417|ref|XP_002285821.1| PREDICTED: uncharacterized protein LOC100250529 [Vitis vinifera] gi|302141895|emb|CBI19098.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 154/207 (74%), Positives = 176/207 (85%), Gaps = 13/207 (6%)

Query: 3   SNMRTICRPHM---VFTSLISCRDQARSFIKVSFRSPNYRPRLS------SWFGFRELNR 53
           SN+RTICRPH+    F+S I CR QA +  ++SFR+PN + R+S       WF   + NR
Sbjct: 2   SNLRTICRPHIHIVFFSSFICCRSQA-AKSRISFRNPNSQSRVSLPCAFSPWF---DSNR 57

Query: 54  TESWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRG 113
            E WFRV+QRRT+V A+ W DEKSPYETLEL+RDADEE+IK+AYRRLAKFYHPDVYDGRG
Sbjct: 58  NEPWFRVSQRRTLVRASKWTDEKSPYETLELDRDADEEKIKLAYRRLAKFYHPDVYDGRG 117

Query: 114 TLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQR 173
           TL +GETAEA+FIKIQAAYELLID+++RRQYD DNRVNPMKASQAWMEWL+KKRKAFDQR
Sbjct: 118 TLAEGETAEARFIKIQAAYELLIDDKKRRQYDNDNRVNPMKASQAWMEWLMKKRKAFDQR 177

Query: 174 GDMAIAAWAEQQQLELNLRARRLSRSK 200
           GDMAIAAWAEQQQ ELNLRARRLSRSK
Sbjct: 178 GDMAIAAWAEQQQRELNLRARRLSRSK 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839657|ref|XP_002887710.1| hypothetical protein ARALYDRAFT_476957 [Arabidopsis lyrata subsp. lyrata] gi|297333551|gb|EFH63969.1| hypothetical protein ARALYDRAFT_476957 [Arabidopsis lyrata subsp. lyrata]

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 146/199 (73%), Positives = 175/199 (87%), Gaps = 1/199 (0%)

Query: 3   SNMRTICRPHMVFTSLISC-RDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVN 61
           SN+R I RPH VF+S++ C R Q+RS  +VS ++  +R R+S+   FR    +   FR+N
Sbjct: 2   SNLRAIGRPHSVFSSIVCCSRHQSRSLFRVSIKNVAFRNRVSNSSWFRSKEDSNLCFRLN 61

Query: 62  QRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETA 121
           QR+T+V A+NW++EKSPY+TLEL+RDA+EEQIKVAYRRLAKFYHPDVYDG+GTLE+GETA
Sbjct: 62  QRKTLVRASNWSEEKSPYDTLELDRDAEEEQIKVAYRRLAKFYHPDVYDGKGTLEEGETA 121

Query: 122 EAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAW 181
           EA+FIKIQAAYELL+D E++RQYDMDNRVNPMKASQAWMEWL+KKRKAFDQRGDMAIAAW
Sbjct: 122 EARFIKIQAAYELLMDSEKKRQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAIAAW 181

Query: 182 AEQQQLELNLRARRLSRSK 200
           AEQQQLE+NLRARRLSRSK
Sbjct: 182 AEQQQLEINLRARRLSRSK 200

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515831|ref|XP_003526601.1| PREDICTED: uncharacterized protein LOC100808285 [Glycine max]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 156/200 (78%), Positives = 171/200 (85%), Gaps = 5/200 (2%)

Query: 3   SNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTES--WFRV 60
           SN+RT+CRP  VF S IS + Q RS  +VSFR+PN +PRL S F +  +    S  WFRV
Sbjct: 2   SNLRTLCRPQTVF-SFISFQHQFRS--RVSFRNPNCKPRLPSPFLYSTIASRGSNPWFRV 58

Query: 61  NQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGET 120
           NQRRTV  A NWA++KSPYETLELE DAD+EQIK AYRRLAKFYHPDVYDGRGTLE+GET
Sbjct: 59  NQRRTVAKATNWAEQKSPYETLELEGDADDEQIKNAYRRLAKFYHPDVYDGRGTLEEGET 118

Query: 121 AEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAA 180
           AEA+FIKIQ+AYELLID ERRRQYDMD+RVNPMKASQAWMEWLIKKRKAFDQRGDMAIAA
Sbjct: 119 AEARFIKIQSAYELLIDRERRRQYDMDSRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAA 178

Query: 181 WAEQQQLELNLRARRLSRSK 200
           WAEQQQ ELNLR RRLSRSK
Sbjct: 179 WAEQQQRELNLRVRRLSRSK 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411751|ref|NP_565163.1| chaperone DnaJ-domain-containing protein [Arabidopsis thaliana] gi|42572151|ref|NP_974166.1| chaperone DnaJ-domain-containing protein [Arabidopsis thaliana] gi|6573763|gb|AAF17683.1|AC009243_10 F28K19.14 [Arabidopsis thaliana] gi|107738377|gb|ABF83686.1| At1g77930 [Arabidopsis thaliana] gi|332197925|gb|AEE36046.1| chaperone DnaJ-domain-containing protein [Arabidopsis thaliana] gi|332197926|gb|AEE36047.1| chaperone DnaJ-domain-containing protein [Arabidopsis thaliana]

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 143/199 (71%), Positives = 175/199 (87%), Gaps = 2/199 (1%)

Query: 3   SNMRTICRPHMVFTSLISC-RDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVN 61
           SN+R ICRP+ VF+S++ C R Q+RS  +VS ++  +R + S+   FR  N +  WFR+N
Sbjct: 2   SNLRAICRPYSVFSSIVCCSRHQSRSLFRVSIKNVAFRNQSSNSSWFRSKN-SNLWFRLN 60

Query: 62  QRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETA 121
           QR+T+V A+NW+ EKSPY+TLEL+R+A+EEQIKVAYRRLAKFYHPDVYDG+GTLE+GETA
Sbjct: 61  QRKTLVRASNWSQEKSPYDTLELDRNAEEEQIKVAYRRLAKFYHPDVYDGKGTLEEGETA 120

Query: 122 EAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAW 181
           EA+FIKIQAAYELL+D E++ QYDMDNRVNPMKASQAWMEWL+KKRKAFDQRGDMA+AAW
Sbjct: 121 EARFIKIQAAYELLMDSEKKVQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAVAAW 180

Query: 182 AEQQQLELNLRARRLSRSK 200
           AEQQQL++NLRARRLSRSK
Sbjct: 181 AEQQQLDINLRARRLSRSK 199

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066897|ref|XP_002302268.1| predicted protein [Populus trichocarpa] gi|118487124|gb|ABK95391.1| unknown [Populus trichocarpa] gi|222843994|gb|EEE81541.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 145/202 (71%), Positives = 164/202 (81%), Gaps = 8/202 (3%)

Query: 5   MRTICRPHMVFTSLI---SCRDQARSFIKVSFRSP-NYRPRLSSWFG--FRELNRTESWF 58
           +RT CRPH V TS     S R Q RS I+VSFR+P +   R SS+F       N  + WF
Sbjct: 9   LRTACRPHTVLTSFTCSSSSRHQPRSRIRVSFRTPPDCNKRHSSFFSPWLIHTNNNDPWF 68

Query: 59  RVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKG 118
           RVN +RT+V A  W + KSPYETLELERDADEE IKVAYRRLAK+YHPDVYDGRGTLE+G
Sbjct: 69  RVNHKRTIVRA--WTEPKSPYETLELERDADEEDIKVAYRRLAKYYHPDVYDGRGTLEEG 126

Query: 119 ETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAI 178
           ETAEA+FIKIQAAYELL+D+E+RRQY+MDNRVNPMKASQAWMEWL+KKR AFDQRGDMAI
Sbjct: 127 ETAEARFIKIQAAYELLMDDEKRRQYNMDNRVNPMKASQAWMEWLMKKRTAFDQRGDMAI 186

Query: 179 AAWAEQQQLELNLRARRLSRSK 200
            AWAEQQQ E+NLR RRLSR+K
Sbjct: 187 MAWAEQQQREMNLRVRRLSRTK 208

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511575|ref|XP_004163994.1| PREDICTED: uncharacterized LOC101214898 [Cucumis sativus]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/202 (71%), Positives = 168/202 (83%), Gaps = 5/202 (2%)

Query: 3   SNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLS----SWFGFRELNRTESWF 58
           SN+RT CRPH    S      + RS   VSFR+PN + R S    ++        T++WF
Sbjct: 2   SNLRTACRPH-AMFSSFIFSSRFRSMPTVSFRNPNNKRRFSLFSPTFNSSPCFCPTQNWF 60

Query: 59  RVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKG 118
           R+NQRRT+  A+NWA+EKSPYETLELERDAD+EQIK ++RRLAKFYHPDVYDGRGTLE+G
Sbjct: 61  RINQRRTLAMASNWANEKSPYETLELERDADDEQIKSSHRRLAKFYHPDVYDGRGTLEEG 120

Query: 119 ETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAI 178
           ETAEA+FIKIQAAYELL+D+E+RRQYD+DNRVNPMKASQAWMEWLIKKRKAFDQRG+MAI
Sbjct: 121 ETAEARFIKIQAAYELLMDDEKRRQYDVDNRVNPMKASQAWMEWLIKKRKAFDQRGEMAI 180

Query: 179 AAWAEQQQLELNLRARRLSRSK 200
           AAWAEQQQ E+NLRARRLS+SK
Sbjct: 181 AAWAEQQQREMNLRARRLSQSK 202

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545582|ref|XP_002513851.1| chaperone protein DNAj, putative [Ricinus communis] gi|223546937|gb|EEF48434.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 163/187 (87%), Gaps = 5/187 (2%)

Query: 19  ISCRD-QARS-FIKVSFRS-PNYRPRLSSWFGFREL--NRTESWFRVNQRRTVVSAANWA 73
           +SCR  Q RS  ++VSFR+ P+ +P LSS   F        +SWFRVNQRRT V AANW 
Sbjct: 1   MSCRHHQPRSNGVRVSFRNHPDDKPPLSSPSLFSSWLHGNNDSWFRVNQRRTAVRAANWT 60

Query: 74  DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE 133
           D+KSPY+TLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLE+GETAEA+FIKIQAAYE
Sbjct: 61  DQKSPYDTLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYE 120

Query: 134 LLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQLELNLRA 193
           LL+D+++ RQYDMD+RVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQ E+NLRA
Sbjct: 121 LLMDDDKHRQYDMDHRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQREMNLRA 180

Query: 194 RRLSRSK 200
           RRL+RSK
Sbjct: 181 RRLARSK 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491678|gb|AFK33905.1| unknown [Medicago truncatula]

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 140/205 (68%), Positives = 163/205 (79%), Gaps = 10/205 (4%)

Query: 3   SNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRL------SSWFGFR-ELNRTE 55
           SN+RT+CR   VF S I+CR Q R   + SF +PN +P L      S+W G     +R  
Sbjct: 2   SNLRTLCRTQTVF-SFINCRHQFR--FRASFWNPNCKPYLQSPWLYSTWLGSSGNSSRPM 58

Query: 56  SWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTL 115
             FR+NQ+RTV  A NW  +K+PYETLELE DAD+EQIK+AYRRLAKFYHPDVYDGRG L
Sbjct: 59  PQFRLNQKRTVAKATNWDQQKTPYETLELEGDADDEQIKIAYRRLAKFYHPDVYDGRGIL 118

Query: 116 EKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGD 175
           E+GETAEA+FIKIQAAYELLID ERR++YDM N+ NPMKASQAWMEWL+KKRKAF+QRGD
Sbjct: 119 EEGETAEARFIKIQAAYELLIDSERRKKYDMANQANPMKASQAWMEWLMKKRKAFNQRGD 178

Query: 176 MAIAAWAEQQQLELNLRARRLSRSK 200
           MAI AWAEQQQ ELN+RAR+LSRSK
Sbjct: 179 MAIYAWAEQQQRELNVRARQLSRSK 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458087|ref|XP_004146779.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101214898 [Cucumis sativus]

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/202 (69%), Positives = 164/202 (81%), Gaps = 8/202 (3%)

Query: 3   SNMRTICRPHMVFTSLISCRDQARSFIKVSFRSPNYRPRLS----SWFGFRELNRTESWF 58
           SN+RT CRPH    S      + RS   VSFR+PN + R S    ++        T++WF
Sbjct: 2   SNLRTACRPH-AMFSSFIFSSRFRSMPTVSFRNPNNKRRFSLFSPTFNSSPCFCPTQNWF 60

Query: 59  RVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKG 118
           R+NQRRT+  A+NWA+EKSPYETLELERDAD+EQIK +YRRLAKFYHPDVYDGRGTLE+G
Sbjct: 61  RINQRRTLAMASNWANEKSPYETLELERDADDEQIKSSYRRLAKFYHPDVYDGRGTLEEG 120

Query: 119 ETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAI 178
           ETAEA+FIKIQ    LL+D+E+RRQYD+DNRVNPMKASQAWMEWLIKKRKAFDQRG+MAI
Sbjct: 121 ETAEARFIKIQX---LLMDDEKRRQYDVDNRVNPMKASQAWMEWLIKKRKAFDQRGEMAI 177

Query: 179 AAWAEQQQLELNLRARRLSRSK 200
           AAWAEQQQ E+NLRARRLS+SK
Sbjct: 178 AAWAEQQQREMNLRARRLSQSK 199

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2029381	271	AT1G77930 "AT1G77930" [Arabido	0.867	0.726	0.718	8.1e-76
UNIPROTKB|O25668	288	C694_05300 "Co-chaperone-curve	0.290	0.229	0.52	4.2e-13
TIGR_CMR|CJE_1364	297	CJE_1364 "co-chaperone protein	0.273	0.208	0.536	2.7e-11
UNIPROTKB|G4N1N5	416	MGG_07502 "Chaperone dnaJ 2" [	0.268	0.146	0.507	1.4e-10
CGD|CAL0004107	488	MDJ1 [Candida albicans (taxid:	0.268	0.125	0.514	1.3e-09
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.264	0.161	0.507	3.1e-09
TAIR|locus:2016234	500	AT1G80030 [Arabidopsis thalian	0.572	0.26	0.340	7.5e-09
TAIR|locus:2088585	517	AT3G17830 [Arabidopsis thalian	0.321	0.141	0.445	8e-09
DICTYBASE|DDB_G0291568	459	dnaja1 "DnaJ homolog subfamily	0.295	0.145	0.464	8.7e-09
SGD|S000001878	511	MDJ1 "Co-chaperone that stimul	0.277	0.123	0.485	1.1e-08

TAIR|locus:2029381 AT1G77930 "AT1G77930" [Arabidopsis thaliana (taxid:3702)]

 Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
 Identities = 143/199 (71%), Positives = 175/199 (87%)

Query:     3 SNMRTICRPHMVFTSLISC-RDQARSFIKVSFRSPNYRPRLSSWFGFRELNRTESWFRVN 61
             SN+R ICRP+ VF+S++ C R Q+RS  +VS ++  +R + S+   FR  N +  WFR+N
Sbjct:     2 SNLRAICRPYSVFSSIVCCSRHQSRSLFRVSIKNVAFRNQSSNSSWFRSKN-SNLWFRLN 60

Query:    62 QRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETA 121
             QR+T+V A+NW+ EKSPY+TLEL+R+A+EEQIKVAYRRLAKFYHPDVYDG+GTLE+GETA
Sbjct:    61 QRKTLVRASNWSQEKSPYDTLELDRNAEEEQIKVAYRRLAKFYHPDVYDGKGTLEEGETA 120

Query:   122 EAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAW 181
             EA+FIKIQAAYELL+D E++ QYDMDNRVNPMKASQAWMEWL+KKRKAFDQRGDMA+AAW
Sbjct:   121 EARFIKIQAAYELLMDSEKKVQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAVAAW 180

Query:   182 AEQQQLELNLRARRLSRSK 200
             AEQQQL++NLRARRLSRSK
Sbjct:   181 AEQQQLDINLRARRLSRSK 199

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

UNIPROTKB|O25668 C694_05300 "Co-chaperone-curved DNA binding protein A (CbpA)" [Helicobacter pylori 26695 (taxid:85962)]

 Score = 174 (66.3 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 39/75 (52%), Positives = 51/75 (68%)

Query:    76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
             KS Y+TL +  +A +++IK +YRRLA+ YHPD       L K + AE KF +I AAYE+L
Sbjct:     3 KSLYQTLNVSENASQDEIKKSYRRLARQYHPD-------LNKTKEAEEKFKEINAAYEIL 55

Query:   136 IDEERRRQYDM--DN 148
              DEE+RRQYD   DN
Sbjct:    56 SDEEKRRQYDQFGDN 70

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|CJE_1364 CJE_1364 "co-chaperone protein DnaJ" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 164 (62.8 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 37/69 (53%), Positives = 48/69 (69%)

Query:    77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI 136
             S YETL + ++A  ++IK AYRRLA+ YHPD+       EKG  AE KF +I AAYE+L 
Sbjct:     3 SLYETLGVSKNASADEIKKAYRRLARKYHPDI-----NKEKG--AEEKFKEINAAYEILS 55

Query:   137 DEERRRQYD 145
             DE++R QYD
Sbjct:    56 DEKKRAQYD 64

GO:0006457 "protein folding" evidence=ISS

GO:0006950 "response to stress" evidence=ISS

UNIPROTKB|G4N1N5 MGG_07502 "Chaperone dnaJ 2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 163 (62.4 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 34/67 (50%), Positives = 46/67 (68%)

Query:    79 YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
             Y+ LE++R+ADE+ IK+AYRRL+K +HPD   G  T      AE KF+++  AYE LID+
Sbjct:    24 YKILEIDRNADEKAIKIAYRRLSKKWHPDKNPGDAT------AEGKFVEVSEAYEALIDK 77

Query:   139 ERRRQYD 145
               RR YD
Sbjct:    78 TTRRIYD 84

GO:0005575 "cellular_component" evidence=ND

CGD|CAL0004107 MDJ1 [Candida albicans (taxid:5476)]

 Score = 158 (60.7 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 35/68 (51%), Positives = 45/68 (66%)

Query:    78 PYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
             PY+TL +++ AD+ QIK AY  L K YHPDV        K + AE +F KIQ +YELL D
Sbjct:    48 PYKTLGVDKSADDRQIKKAYYDLVKKYHPDV-------NKEKDAEKRFHKIQESYELLRD 100

Query:   138 EERRRQYD 145
             +E+R QYD
Sbjct:   101 KEKRAQYD 108

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0031314 "extrinsic to mitochondrial inner membrane" evidence=IEA

GO:0006458 "'de novo' protein folding" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0006515 "misfolded or incompletely synthesized protein catabolic process" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0042026 "protein refolding" evidence=IEA

GO:0001671 "ATPase activator activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 34/67 (50%), Positives = 44/67 (65%)

Query:    79 YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
             YE L L + A +++IK AYRRLAK YHPDV        K E A  KF ++Q AYE+L D+
Sbjct:     7 YEVLGLSKGASKDEIKKAYRRLAKKYHPDV-------SKEENAIEKFKEVQEAYEVLSDD 59

Query:   139 ERRRQYD 145
             ++R QYD
Sbjct:    60 QKRAQYD 66

GO:0009408 "response to heat" evidence=ISS

TAIR|locus:2016234 AT1G80030 [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 50/147 (34%), Positives = 74/147 (50%)

Query:     5 MRTICRPHMVFTSLI--SCRDQARS----FIKVSFRSPNYRPRLSSWFGFRELNRTESWF 58
             M  +  P ++ +SL   +  D  RS    F   S    N+R    S+      + + + +
Sbjct:     1 MAALASPSLIPSSLCFAAAADGPRSLSSNFSAFSDGGSNFRYH-KSFLSLSSSSSSSTPY 59

Query:    59 RVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKG 118
             R  + R++V  A   D    Y TL + + A+ ++IK AYRRLA+ YHPDV       E G
Sbjct:    60 RNRRGRSLVVFATSGDY---YATLGVSKSANNKEIKAAYRRLARQYHPDV-----NKEPG 111

Query:   119 ETAEAKFIKIQAAYELLIDEERRRQYD 145
              T   KF +I AAYE+L DE++R  YD
Sbjct:   112 ATE--KFKEISAAYEVLSDEQKRALYD 136

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

TAIR|locus:2088585 AT3G17830 [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 8.0e-09, P = 8.0e-09
 Identities = 37/83 (44%), Positives = 50/83 (60%)

Query:    63 RRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAE 122
             RR V++ A   D    Y TL + R+A  ++IK +YR+LA+ YHPD       + K   AE
Sbjct:    52 RRRVITMAAGTDH---YSTLNVNRNATLQEIKSSYRKLARKYHPD-------MNKNPGAE 101

Query:   123 AKFIKIQAAYELLIDEERRRQYD 145
              KF +I AAYE+L DEE+R  YD
Sbjct:   102 DKFKQISAAYEVLSDEEKRSAYD 124

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

DICTYBASE|DDB_G0291568 dnaja1 "DnaJ homolog subfamily A member 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 152 (58.6 bits), Expect = 8.7e-09, P = 8.7e-09
 Identities = 33/71 (46%), Positives = 44/71 (61%)

Query:    75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
             EK  YE L ++ D  E+++K AYR++A  YHPD   G G     + AEAKF  I  AYE+
Sbjct:     4 EKEYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGK----DAAEAKFKDISEAYEV 59

Query:   135 LIDEERRRQYD 145
             L D E+R+ YD
Sbjct:    60 LSDPEKRKMYD 70

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

SGD|S000001878 MDJ1 "Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 34/70 (48%), Positives = 44/70 (62%)

Query:    76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
             K PY+TL L++ A   +IK AY +LAK YHPD+        K   AE KF  +Q AYE+L
Sbjct:    60 KDPYDTLGLKKSATGAEIKKAYYKLAKKYHPDI-------NKEPDAEKKFHDLQNAYEIL 112

Query:   136 IDEERRRQYD 145
              DE +R+QYD
Sbjct:   113 SDETKRQQYD 122

GO:0051082 "unfolded protein binding" evidence=IEA;IMP

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA;IMP

GO:0042026 "protein refolding" evidence=IMP;IDA

GO:0006458 "'de novo' protein folding" evidence=IMP

GO:0006515 "misfolded or incompletely synthesized protein catabolic process" evidence=IMP

GO:0000002 "mitochondrial genome maintenance" evidence=IMP

GO:0031314 "extrinsic to mitochondrial inner membrane" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0001671 "ATPase activator activity" evidence=IDA

GO:0006457 "protein folding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015296001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (272 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.467
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)			•						0.461
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.455
	GSVIVG00001482001	SubName- Full=Chromosome chr3 scaffold_117, whole genome shotgun sequence; (103 aa)			•						0.454
	GSVIVG00004141001	SubName- Full=Chromosome undetermined scaffold_611, whole genome shotgun sequence; (468 aa)			•						0.450
	GSVIVG00012517001	SubName- Full=Chromosome undetermined scaffold_388, whole genome shotgun sequence; Flags- Fragm [...] (372 aa)			•						0.447
	GSVIVG00027610001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (105 aa)			•						0.446
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)			•						0.445
	GSVIVG00022731001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (655 aa)			•						0.441
	GSVIVG00037232001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (658 aa)			•						0.440

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	227
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	5e-24
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-22
pfam00226	63	pfam00226, DnaJ, DnaJ domain	4e-21
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-18
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	4e-18
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	6e-17
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	4e-16
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	6e-16
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	6e-16
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	7e-16
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	9e-16
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-15
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	3e-15
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-13
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	3e-13
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	2e-12
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-12
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	2e-12
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-12
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	3e-12
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	3e-12
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	7e-12
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	7e-12
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	8e-12
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	1e-11
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-11
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	3e-11
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	3e-11
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	5e-11
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	1e-10
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	3e-10
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	3e-10
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-09
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-09
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-09
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	4e-09
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-07
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	2e-05
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	8e-04

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 97.7 bits (244), Expect = 5e-24
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 6/68 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + +DA EE+IK AYR+LAK YHPD   G       + AE KF +I  AYE+L D 
Sbjct: 7   YEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD------KEAEEKFKEINEAYEVLSDP 60

Query: 139 ERRRQYDM 146
           E+R  YD 
Sbjct: 61  EKRAAYDQ 68

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 7/68 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + +DA EE+IK AYR+LAK YHPD         K + AE KF +I  AYE+L D 
Sbjct: 3   YEILGVSKDASEEEIKKAYRKLAKKYHPDR-------NKDKEAEEKFKEINEAYEVLSDP 55

Query: 139 ERRRQYDM 146
           E+R QYD 
Sbjct: 56  EKRAQYDQ 63

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 83.0 bits (206), Expect = 4e-21
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 78  PYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
            YE L + RDA +E+IK AYR+LA  YHPD   G         AE KF +I  AYE+L D
Sbjct: 2   YYEILGVPRDASDEEIKKAYRKLALKYHPDKNPG------DPAAEEKFKEINEAYEVLSD 55

Query: 138 EERRRQYD 145
            E+R  YD
Sbjct: 56  PEKRAIYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + R+A E++IK AYR+LA  YHPD    R   +K   AE KF +I+ AYE+L D 
Sbjct: 7   YEVLGVSRNASEDEIKKAYRKLAMKYHPD----RNPGDK--EAEEKFKEIKEAYEVLSDP 60

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 61  QKRAAYD 67

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 81.4 bits (201), Expect = 4e-18
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 6/73 (8%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           A +K  YE L ++R+A EE+IK AYRRLAK YHPD+  G       + AE KF +I  AY
Sbjct: 2   AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPG------DKEAEQKFKEINEAY 55

Query: 133 ELLIDEERRRQYD 145
           E+L D ++R QYD
Sbjct: 56  EILSDPQKRAQYD 68

Length = 386

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 78.2 bits (193), Expect = 6e-17
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + +DA +++IK AYR+L+K YHPD       + K   AE K+ ++Q AYE L D 
Sbjct: 7   YDRLGVSKDASQDEIKKAYRKLSKKYHPD-------INKEPGAEEKYKEVQEAYETLSDP 59

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 60  QKRAAYD 66

Length = 380

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L + R+A + +IK AYR+LA+  HPDV          E A+ KF +I  AYE+L D 
Sbjct: 6   YGLLGVSRNASDAEIKRAYRKLARELHPDVNP-------DEEAQEKFKEISVAYEVLSDP 58

Query: 139 ERRRQYDM 146
           E+RR  D+
Sbjct: 59  EKRRIVDL 66

Length = 378

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 69.2 bits (170), Expect = 6e-16
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 5/65 (7%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
              YE L + RDA  ++IK AYR+LA  YHPD    +   +K E AE KF +I  AYE+L
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPD----KNPGDK-EEAEEKFKEINEAYEVL 55

Query: 136 IDEER 140
            D E+
Sbjct: 56  SDPEK 60

Length = 60

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 75.1 bits (185), Expect = 6e-16
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + + A +++IK AYR+L+K YHPD+        K E A+ KF +I  AYE+L D+
Sbjct: 7   YEVLGVSKSASKDEIKKAYRKLSKKYHPDI-------NKEEGADEKFKEISEAYEVLSDD 59

Query: 139 ERRRQYD 145
           ++R QYD
Sbjct: 60  QKRAQYD 66

Length = 376

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 68.7 bits (169), Expect = 7e-16
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 6/60 (10%)

Query: 78  PYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
            Y+ L +  DA +E+IK AYR+LA  YHPD             AE KF +I  AYE+L D
Sbjct: 2   YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 74.9 bits (184), Expect = 9e-16
 Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 7/73 (9%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           A+++  YE L ++R+AD+++IK AYR+LA+ YHPDV +  G       AE KF +I  AY
Sbjct: 2   AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEG-------AEEKFKEISEAY 54

Query: 133 ELLIDEERRRQYD 145
            +L D+E+R++YD
Sbjct: 55  AVLSDDEKRQRYD 67

Length = 378

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + RDAD++++K AYRRLA+ YHPDV        K   AE +F +I  AYE+L D 
Sbjct: 6   YEILGVSRDADKDELKRAYRRLARKYHPDV-------NKEPGAEDRFKEINRAYEVLSDP 58

Query: 139 ERRRQYD 145
           E R +YD
Sbjct: 59  ETRARYD 65

Length = 374

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 73.3 bits (180), Expect = 3e-15
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 7/72 (9%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           +K  YE L + R+A +E+IK AYRRLA+ YHPD         K   AE KF +I  AY++
Sbjct: 2   KKDYYEILGVSRNATQEEIKKAYRRLARKYHPD-------FNKNPEAEEKFKEINEAYQV 54

Query: 135 LIDEERRRQYDM 146
           L D E+R+ YD 
Sbjct: 55  LSDPEKRKLYDQ 66

Length = 382

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 10/72 (13%)

Query: 74  DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE 133
           D +  YE L L +D    +IK AYR+LA  +HPD         KG   E KF +I  AYE
Sbjct: 26  DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPD---------KGGDPE-KFKEISRAYE 75

Query: 134 LLIDEERRRQYD 145
           +L D E+R+ YD
Sbjct: 76  VLSDPEKRKIYD 87

Length = 421

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 67.3 bits (164), Expect = 3e-13
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 5/70 (7%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y+ L ++R+A +E IK A+R LAK +HPD++ G     K E AE KF +I  AYE+L
Sbjct: 3   KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPG----NKAE-AEEKFKEISEAYEVL 57

Query: 136 IDEERRRQYD 145
            D ++RRQYD
Sbjct: 58  SDPQKRRQYD 67

Length = 365

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 64.8 bits (158), Expect = 2e-12
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y  + ++   D + IK AYRRLA+ YHPDV        K   AEA+F ++  A+E+L
Sbjct: 4   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV-------SKEPDAEARFKEVAEAWEVL 56

Query: 136 IDEERRRQYD 145
            DE+RR +YD
Sbjct: 57  SDEQRRAEYD 66

Length = 306

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 65.3 bits (159), Expect = 2e-12
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 8/72 (11%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGET-AEAKFIKIQAAYE 133
           EK  Y+ L + +DA E +IK AYR+LA+ YHPD         KG+  AE +F +I  AY+
Sbjct: 8   EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDA-------NKGDAKAEERFKEISEAYD 60

Query: 134 LLIDEERRRQYD 145
           +L DE++R++YD
Sbjct: 61  VLSDEKKRKEYD 72

Length = 389

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           +K  YE L + R+A +E+IK AY+RL K +HPD    R    + E AE KF +IQ AYE+
Sbjct: 3   KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPD----RHPENRKE-AEQKFKEIQEAYEV 57

Query: 135 LIDEERRRQYD 145
           L D ++R  YD
Sbjct: 58  LSDPQKRAMYD 68

Length = 369

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L L +DA  E IK AYR+LA  YHPD             AE KF +I  AY +L D 
Sbjct: 8   YEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD-------AEEKFKEISEAYAVLSDA 60

Query: 139 ERRRQYD 145
           E+R QYD
Sbjct: 61  EKRAQYD 67

Length = 377

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + R AD+++IK AYR+LA  YHPD           + AE  F ++  AYE+L ++
Sbjct: 6   YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD------NKEAEEHFKEVNEAYEVLSND 59

Query: 139 ERRRQYD 145
           ++RR+YD
Sbjct: 60  DKRRRYD 66

Length = 397

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 64.6 bits (157), Expect = 3e-12
 Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 7/71 (9%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           +K  YE L + + A E++I+ AYR+LAK YHPD       L K   A  K ++I  A ++
Sbjct: 3   KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPD-------LNKSPDAHDKMVEINEAADV 55

Query: 135 LIDEERRRQYD 145
           L+D+++R+QYD
Sbjct: 56  LLDKDKRKQYD 66

Length = 372

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 63.6 bits (155), Expect = 7e-12
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
             ++  YE L + RDA E++IK AYR+LA  YHPD             AE KF +   AY
Sbjct: 1   MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPD------NPEAEQKFKEAAEAY 54

Query: 133 ELLIDEERRRQYD 145
           E+L D E+R +YD
Sbjct: 55  EVLRDAEKRARYD 67

Length = 373

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 63.5 bits (154), Expect = 7e-12
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 7/74 (9%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++R+A  +++K AYR+LA+ YHPDV        K   AE KF +++ AY+ L D 
Sbjct: 7   YEVLGVDRNASVDEVKKAYRKLARKYHPDV-------NKAPDAEDKFKEVKEAYDTLSDP 59

Query: 139 ERRRQYDMDNRVNP 152
           +++  YD     +P
Sbjct: 60  QKKAHYDQFGHTDP 73

Length = 371

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 6/70 (8%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  YE L LE+ A +++IK A+R+LA  YHPD    +G  E    AE KF +I  AY++L
Sbjct: 4   KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPD--KNKGNKE----AEEKFKEINEAYQVL 57

Query: 136 IDEERRRQYD 145
            D +++ QYD
Sbjct: 58  SDPQKKAQYD 67

Length = 380

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 62.3 bits (151), Expect = 1e-11
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y  L + ++A +++IK A+++LA+ YHPDV        K   AE KF +I  AY +L
Sbjct: 4   KDYYAILGVPKNASQDEIKKAFKKLARKYHPDV-------NKSPGAEEKFKEINEAYTVL 56

Query: 136 IDEERRRQYD 145
            D E+RR YD
Sbjct: 57  SDPEKRRIYD 66

Length = 291

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 61.4 bits (148), Expect = 2e-11
 Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           +D    YE L +  +A  E+IK AYR+LA  YHPD   G       + AE KF +I  AY
Sbjct: 3   SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD-----PKVAEEKFKEINEAY 57

Query: 133 ELLIDEERRRQYDMDNRVNP 152
           E+L D ERR +YD     N 
Sbjct: 58  EILSDPERRAEYDKIGADNY 77

Length = 237

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + R A  ++IK AYR+LA  YHPD         K + A  KF +I  AY +L D 
Sbjct: 5   YELLGVSRTASADEIKSAYRKLALKYHPD-------RNKEKGAAEKFAQINEAYAVLSDA 57

Query: 139 ERRRQYD 145
           E+R  YD
Sbjct: 58  EKRAHYD 64

Length = 371

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + RDA EE+IK +YR+LA  YHPD   G       + AE  F +   AYE+L D 
Sbjct: 7   YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPG------DKEAEELFKEAAEAYEVLSDP 60

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 61  KKRGIYD 67

Length = 366

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L + + A  E+IK AYR+LA  YHPD   G         AE +F ++  AYE+L D 
Sbjct: 4   YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA------EAEKRFKEVSEAYEVLSDA 57

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 58  QKRESYD 64

Length = 391

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 60.2 bits (145), Expect = 1e-10
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++RDADE++IK A+R+LAK YHPD         K   A + F +I  A ++L + 
Sbjct: 5   YEVLGIDRDADEQEIKKAFRKLAKKYHPDR-------NKAPDAASIFAEINEANDVLSNP 57

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 58  KKRANYD 64

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 58.8 bits (142), Expect = 3e-10
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           E+S Y+ L + + A++E+IK AYR+LA  YHPD   G       + +E KF +   AYE+
Sbjct: 3   ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG------NKESEEKFKEATEAYEI 56

Query: 135 LIDEERRRQYD 145
           L D ++R+ YD
Sbjct: 57  LRDPKKRQAYD 67

Length = 372

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
           W  EK  Y+ L +  DA  E+IK AYR+LA+  HPD   G         AE +F  +  A
Sbjct: 6   WV-EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPG------DPAAEERFKAVSEA 58

Query: 132 YELLIDEERRRQYD 145
           +++L D  +R++YD
Sbjct: 59  HDVLSDPAKRKEYD 72

Length = 392

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 57.3 bits (138), Expect = 1e-09
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + + A +  +K AY +LAK YHPD  D +        AE KF +I AAY++L DE
Sbjct: 6   YQILGVSKTASQADLKKAYLKLAKQYHPDTTDAK-------DAEKKFKEINAAYDVLKDE 58

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 59  QKRAAYD 65

Length = 372

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           A+++  YE L + + A  ++IK AYR+ A  YHPD   G       + AE KF +   AY
Sbjct: 2   AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPG------DKEAEEKFKEAAEAY 55

Query: 133 ELLIDEERRRQYD 145
           ++L D ++R +YD
Sbjct: 56  DVLSDPDKRSRYD 68

Length = 386

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 56.5 bits (136), Expect = 1e-09
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 6/71 (8%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           ++  YE L L + A +++IK AYR++A  YHPD   G       + AE+ F +   AYE+
Sbjct: 2   KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG------NKEAESIFKEATEAYEV 55

Query: 135 LIDEERRRQYD 145
           LID+ +R QYD
Sbjct: 56  LIDDNKRAQYD 66

Length = 365

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 55.5 bits (133), Expect = 4e-09
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 8/86 (9%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           E S YE LE+E+ +++E IK +YR+LA  YHPD   G       + AE KF  I  AY +
Sbjct: 2   ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG------DKEAEEKFKLINEAYGV 55

Query: 135 LIDEERRRQYDMDNR--VNPMKASQA 158
           L DE++R  YD   +  +N   ASQ+
Sbjct: 56  LSDEKKRALYDRYGKKGLNQAGASQS 81

Length = 369

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 78  PYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
           PYE L +++D  E  IK  YR L+  +HPD         + E  E K+  I  AY LL D
Sbjct: 100 PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEY-EEKYKTITKAYGLLTD 158

Query: 138 EERRRQY 144
           ++RR  Y
Sbjct: 159 KKRRENY 165

Length = 610

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTL--EKGETAEAKFIKIQAAYELLI 136
           Y+ L +    D+++IK AYR+L   +HPD    +G L  E  E A+ K  +IQAAYE LI
Sbjct: 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKG-LPPEMMEMAKEKAQEIQAAYE-LI 260

Query: 137 DEERR 141
            +++ 
Sbjct: 261 KKQKG 265

Length = 267

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 39.6 bits (92), Expect = 8e-04
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 88  ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD 145
           A   QI  A+++    YHPD     G     E     F  IQ A E+L D + R QYD
Sbjct: 58  AIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEF----FKLIQKAREVLGDRKLRLQYD 111

Length = 379

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.94
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.89
PRK14288	369	chaperone protein DnaJ; Provisional	99.86
PRK14296	372	chaperone protein DnaJ; Provisional	99.86
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.84
PRK14286	372	chaperone protein DnaJ; Provisional	99.83
PRK14287	371	chaperone protein DnaJ; Provisional	99.83
PRK14285	365	chaperone protein DnaJ; Provisional	99.82
PRK14298	377	chaperone protein DnaJ; Provisional	99.81
PRK14278	378	chaperone protein DnaJ; Provisional	99.81
PRK14276	380	chaperone protein DnaJ; Provisional	99.81
PRK14294	366	chaperone protein DnaJ; Provisional	99.81
PRK14301	373	chaperone protein DnaJ; Provisional	99.81
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.81
PRK14279	392	chaperone protein DnaJ; Provisional	99.81
PRK14291	382	chaperone protein DnaJ; Provisional	99.8
PRK14282	369	chaperone protein DnaJ; Provisional	99.79
PRK10767	371	chaperone protein DnaJ; Provisional	99.79
PRK14283	378	chaperone protein DnaJ; Provisional	99.78
PRK14277	386	chaperone protein DnaJ; Provisional	99.78
PRK14297	380	chaperone protein DnaJ; Provisional	99.77
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.77
PRK14299	291	chaperone protein DnaJ; Provisional	99.77
PRK14290	365	chaperone protein DnaJ; Provisional	99.77
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.77
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.77
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.77
PRK14280	376	chaperone protein DnaJ; Provisional	99.77
PRK14295	389	chaperone protein DnaJ; Provisional	99.76
PRK14284	391	chaperone protein DnaJ; Provisional	99.76
PRK14281	397	chaperone protein DnaJ; Provisional	99.75
PRK14293	374	chaperone protein DnaJ; Provisional	99.75
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.75
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.74
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.73
PRK14289	386	chaperone protein DnaJ; Provisional	99.73
PRK14300	372	chaperone protein DnaJ; Provisional	99.72
PRK14292	371	chaperone protein DnaJ; Provisional	99.72
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.71
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.67
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.65
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.65
PHA03102	153	Small T antigen; Reviewed	99.64
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.62
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.61
PRK05014	171	hscB co-chaperone HscB; Provisional	99.56
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.56
PRK01356	166	hscB co-chaperone HscB; Provisional	99.52
PRK00294	173	hscB co-chaperone HscB; Provisional	99.51
PRK03578	176	hscB co-chaperone HscB; Provisional	99.5
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.44
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.43
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.42
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.4
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.37
PHA02624	647	large T antigen; Provisional	99.37
PTZ00100	116	DnaJ chaperone protein; Provisional	99.34
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.33
PRK01773	173	hscB co-chaperone HscB; Provisional	99.26
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.1
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	99.01
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	99.0
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.38
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.33
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.04
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.71
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.26
KOG0431	453	consensus Auxilin-like protein and related protein	96.73
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.44
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	94.06
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	85.83
PF13446	62	RPT: A repeated domain in UCH-protein	84.7
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	82.98

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=2.7e-27  Score=214.32  Aligned_cols=97  Identities=38%  Similarity=0.558  Sum_probs=82.3

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+      ++|+++|++|++||+||+||++|+.||++|......
T Consensus         3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~------~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~   76 (371)
T COG0484           3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD------KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKA   76 (371)
T ss_pred             ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhCCHHHHHHhhccCcccccc
Confidence            58999999999999999999999999999999999863      789999999999999999999999999999987753


Q ss_pred             hhHHHHHHHHHhhhccc-hhhHHHHHHHH
Q 027187          155 ASQAWMEWLIKKRKAFD-QRGDMAIAAWA  182 (227)
Q Consensus       155 ~~~~~~~~~~~~r~~f~-~~g~~~~~~~~  182 (227)
                      ++.+  .+   .-.+|+ +++|+|..+|+
T Consensus        77 gg~g--g~---g~~~fgg~~~DIF~~~Fg  100 (371)
T COG0484          77 GGFG--GF---GFGGFGGDFGDIFEDFFG  100 (371)
T ss_pred             CCcC--CC---CcCCCCCCHHHHHHHhhc
Confidence            2211  11   112344 48999999996

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=5.2e-24  Score=189.05  Aligned_cols=73  Identities=40%  Similarity=0.625  Sum_probs=68.3

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ...+|||+||||+++|+..|||+|||+||++||||||+++      +.|.+.|+.|+.||+||+||++|+.||++|...
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd------p~A~e~F~~in~AYEVLsDpekRk~YD~~GEeg   85 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD------PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEG   85 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhh
Confidence            3469999999999999999999999999999999999985      889999999999999999999999999998543

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=2.1e-22  Score=184.36  Aligned_cols=70  Identities=44%  Similarity=0.666  Sum_probs=65.0

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .|||+||||+++||.+|||+|||+||++||||+++.+      +.|+++|++|++||+||+||++|+.||++|...
T Consensus         3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~------~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~   72 (369)
T PRK14288          3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD------KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKG   72 (369)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccc
Confidence            7999999999999999999999999999999998753      568999999999999999999999999988643

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=4.1e-22  Score=182.68  Aligned_cols=69  Identities=39%  Similarity=0.701  Sum_probs=64.2

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .+|||+||||+++|+.+|||+|||+||++||||++++       +.|+++|++|++||+||+||++|+.||++|..
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-------~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~   71 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-------PDAHDKMVEINEAADVLLDKDKRKQYDQFGHA   71 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------chHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence            4799999999999999999999999999999999864       45889999999999999999999999998864

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=1.5e-21  Score=174.93  Aligned_cols=69  Identities=43%  Similarity=0.619  Sum_probs=64.7

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      ...||+||||+++|+.+|||+|||+|+++||||||++         +.++|++|++||+||+||++|+.||++|....
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---------~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~   71 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---------AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL   71 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---------HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence            5789999999999999999999999999999999976         67999999999999999999999999996554

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=2.7e-21  Score=177.34  Aligned_cols=99  Identities=33%  Similarity=0.544  Sum_probs=77.1

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++.+      ++++++|++|++||+||+||.+|+.||+++..+...
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~   76 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN------KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA   76 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcc
Confidence            47999999999999999999999999999999998653      568899999999999999999999999988643211


Q ss_pred             h--h---HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          155 A--S---QAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       155 ~--~---~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      .  +   ..+..    +...|+.++++|..+|++
T Consensus        77 ~~~~~~~~~~~~----~~~~~~~~~d~f~~ffgg  106 (372)
T PRK14286         77 GAGGFGQGAYTD----FSDIFGDFGDIFGDFFGG  106 (372)
T ss_pred             ccCCCCCCCccc----ccccccchhhHHHHhhCC
Confidence            1  0   00100    011234567888888863

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=7.9e-21  Score=174.18  Aligned_cols=96  Identities=30%  Similarity=0.520  Sum_probs=76.0

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++.       +.++++|++|++||+||+||++|+.||++|..+...
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~   75 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-------PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQ   75 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccc
Confidence            4799999999999999999999999999999999853       457899999999999999999999999998654321


Q ss_pred             hhHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       155 ~~~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      ....      ....+|.+++++|..+|++
T Consensus        76 ~~~~------~~~~~f~~~~d~f~~~fgg   98 (371)
T PRK14287         76 GFGG------GGAGDFGGFSDIFDMFFGG   98 (371)
T ss_pred             ccCC------CCCccccchHHHHHhhhcc
Confidence            1000      0001244467888888874

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1e-20  Score=173.14  Aligned_cols=101  Identities=32%  Similarity=0.502  Sum_probs=76.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcch
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA  155 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~  155 (227)
                      .|||+||||+++|+.+|||+|||+|+++||||+++.+      +.++++|++|++||+||+||.+|+.||+++..+....
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~   76 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN------KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG   76 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC
Confidence            6999999999999999999999999999999998653      5688999999999999999999999999886432111


Q ss_pred             hH--HHH-HHHHHhhhccchhhHHHHHHHHH
Q 027187          156 SQ--AWM-EWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       156 ~~--~~~-~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      ..  +.. .+ ..+...|+.++++|..+|++
T Consensus        77 ~~~~~~~~g~-~~~~~~~~~~~d~f~~~fgg  106 (365)
T PRK14285         77 GGFEGFSGGF-SGFSDIFEDFGDIFDSFFTG  106 (365)
T ss_pred             CCccccCCCc-cccccccccHHHHHHHhhcC
Confidence            00  000 00 00001134467888888874

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=2.3e-20  Score=171.39  Aligned_cols=99  Identities=36%  Similarity=0.454  Sum_probs=76.6

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      .+|||+||||+++|+.+|||+|||+||++||||+++.       +.++++|++|++||+||+||.+|+.||++|..+...
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~   76 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-------PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN   76 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-------hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccc
Confidence            4799999999999999999999999999999999864       457899999999999999999999999988643221


Q ss_pred             hhHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          155 ASQAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       155 ~~~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      ....-..+ .  ..+|++++++|..+|++
T Consensus        77 ~~~~~~~~-~--~~~~~~~~d~f~~~Fgg  102 (377)
T PRK14298         77 QYSAEDIF-R--GADFGGFGDIFEMFFGG  102 (377)
T ss_pred             ccCccccc-c--cCCcCcchhhhHhhhcC
Confidence            10000000 0  01345577888888874

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=2.2e-20  Score=171.62  Aligned_cols=96  Identities=34%  Similarity=0.472  Sum_probs=75.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcch
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKA  155 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~  155 (227)
                      +|||+||||+++|+.+|||+|||+||++||||++++       +.++++|++|++||+||+||.+|+.||++|.......
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~   75 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-------EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG   75 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc-------HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc
Confidence            699999999999999999999999999999999864       4688999999999999999999999999886321100


Q ss_pred             hHHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          156 SQAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       156 ~~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      +.. ..    +..+|++++++|..||++
T Consensus        76 ~~~-~g----~~~~f~~~~d~f~~ffgg   98 (378)
T PRK14278         76 GGG-GG----FGGGFGGLGDVFEAFFGG   98 (378)
T ss_pred             CCC-CC----CCcCcCchhHHHHHHhCC
Confidence            000 00    001245567888888874

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=1.8e-20  Score=172.34  Aligned_cols=100  Identities=29%  Similarity=0.471  Sum_probs=76.8

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++       +.++++|++|++||+||+||.+|+.||++|......
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~   75 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-------PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANG   75 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccC
Confidence            4799999999999999999999999999999999864       357899999999999999999999999988643221


Q ss_pred             h--h--HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          155 A--S--QAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       155 ~--~--~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                      .  +  .....+.  ...+|+.++++|..+|++
T Consensus        76 ~~~~~~~~~~~~~--~~~~~~~~~d~f~~~fgg  106 (380)
T PRK14276         76 GFGGGAGGFGGFD--GSGGFGGFEDIFSSFFGG  106 (380)
T ss_pred             CCCCCCCCCCCcc--ccccccchhhHHHHHhCc
Confidence            0  0  0000000  001344567888888864

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=2.2e-20  Score=170.96  Aligned_cols=98  Identities=34%  Similarity=0.494  Sum_probs=76.7

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      .+|||+||||+++|+.+|||+|||+||++||||+++.+      +.++++|++|++||+||+||.+|+.||++|..+...
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~   76 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD------KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSG   76 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccC
Confidence            47999999999999999999999999999999998753      468899999999999999999999999998653321


Q ss_pred             hh-HHHHHHHHHhhhccchhhHHHHHHHH
Q 027187          155 AS-QAWMEWLIKKRKAFDQRGDMAIAAWA  182 (227)
Q Consensus       155 ~~-~~~~~~~~~~r~~f~~~g~~~~~~~~  182 (227)
                      .. .+..    .+...|+.++++|..+|+
T Consensus        77 ~~~~~~~----~~~~~~~~~~d~f~~~fg  101 (366)
T PRK14294         77 TGFSGFS----GFDDIFSSFGDIFEDFFG  101 (366)
T ss_pred             CCCCCcC----ccccchhhhhhhHHHhhc
Confidence            10 0000    011124456778888886

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=3.3e-20  Score=170.21  Aligned_cols=98  Identities=34%  Similarity=0.499  Sum_probs=76.6

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      ..|||+||||+++|+.++||+|||+||++||||+++.+      ++++++|++|++||+||+||.+|+.||+++..+...
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~   76 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN------PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNG   76 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC------hHHHHHHHHHHHHHHHhcchhhhhhhhhcccccccc
Confidence            37999999999999999999999999999999998753      568899999999999999999999999988643211


Q ss_pred             hh--HHHHHHHHHhhhccchhhHHHHHHHH
Q 027187          155 AS--QAWMEWLIKKRKAFDQRGDMAIAAWA  182 (227)
Q Consensus       155 ~~--~~~~~~~~~~r~~f~~~g~~~~~~~~  182 (227)
                      .+  .+|.    .....|+.|+++|..+|+
T Consensus        77 ~~~~~g~~----~~~~~~~~f~d~f~~~fg  102 (373)
T PRK14301         77 NGGFGGFS----SAEDIFSHFSDIFGDLFG  102 (373)
T ss_pred             CCCCCCcc----cccccccchHHHHHHHhh
Confidence            10  1111    011234556777777775

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.81  E-value=3.1e-20  Score=172.50  Aligned_cols=67  Identities=42%  Similarity=0.609  Sum_probs=61.9

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ...|||+||||+++||.+|||+|||+||++||||++++          .++|++|++||+||+||++|+.||.++..
T Consensus        26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----------~e~F~~i~~AYevLsD~~kR~~YD~~G~~   92 (421)
T PTZ00037         26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----------PEKFKEISRAYEVLSDPEKRKIYDEYGEE   92 (421)
T ss_pred             cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----------HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence            35899999999999999999999999999999999742          47999999999999999999999998764

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=3.1e-20  Score=171.35  Aligned_cols=69  Identities=41%  Similarity=0.658  Sum_probs=64.3

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      .+|||+||||+++|+.+|||+|||+||++||||+++++      +.|+++|++|++||+||+||++|+.||+++.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD------PAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------hHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            47999999999999999999999999999999998653      5689999999999999999999999999864

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.80  E-value=5.5e-20  Score=169.18  Aligned_cols=70  Identities=46%  Similarity=0.715  Sum_probs=64.6

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .+|||+||||+++|+.++||+|||+|+++||||++++       +.++++|++|++||+||+||.+|+.||+++...
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~   71 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-------PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA   71 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence            3799999999999999999999999999999999864       457899999999999999999999999988643

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.5e-19  Score=165.71  Aligned_cols=72  Identities=44%  Similarity=0.636  Sum_probs=65.4

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..     ...|+++|++|++||+||+||.+|+.||+++...
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~   74 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-----RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG   74 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc-----hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence            47999999999999999999999999999999998652     2458899999999999999999999999987643

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.3e-19  Score=166.07  Aligned_cols=71  Identities=44%  Similarity=0.707  Sum_probs=65.1

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++.+      +.++++|++|++||+||+||.+|+.||.++...
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD------KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA   73 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc------HHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence            47999999999999999999999999999999998653      458899999999999999999999999987643

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=3.2e-19  Score=163.93  Aligned_cols=69  Identities=46%  Similarity=0.785  Sum_probs=64.3

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||++++       +.++++|++|++||+||+||.+|+.||++|..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~   72 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-------EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA   72 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence            5799999999999999999999999999999999864       45889999999999999999999999998754

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=3.5e-19  Score=164.07  Aligned_cols=70  Identities=51%  Similarity=0.787  Sum_probs=64.9

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++..      +.++++|++|++||+||+||.+|+.||++|..
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~   73 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD------KEAEQKFKEINEAYEILSDPQKRAQYDQFGHA   73 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence            47999999999999999999999999999999998753      56889999999999999999999999998764

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=4.1e-19  Score=163.31  Aligned_cols=71  Identities=42%  Similarity=0.693  Sum_probs=65.5

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++.+      +.++++|++|++||+||+||.+|+.||++|..+
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~   73 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN------KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD   73 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence            37999999999999999999999999999999998753      568899999999999999999999999988654

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=5.6e-19  Score=156.53  Aligned_cols=75  Identities=37%  Similarity=0.581  Sum_probs=69.9

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMK  154 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~  154 (227)
                      ..|||+||||+.+++..+|++|||.++++||||||+++      +.|.++|+.|.+||+||+|+..|..||..+......
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~d------P~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~   77 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGD------PQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA   77 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence            57999999999999999999999999999999999985      679999999999999999999999999998766654


Q ss_pred             h
Q 027187          155 A  155 (227)
Q Consensus       155 ~  155 (227)
                      .
T Consensus        78 ~   78 (296)
T KOG0691|consen   78 Q   78 (296)
T ss_pred             h
Confidence            4

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=4.8e-19  Score=157.56  Aligned_cols=69  Identities=41%  Similarity=0.660  Sum_probs=64.1

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ..|||+||||+++||.+|||+|||+|+++||||++++       +.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~   71 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-------PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT   71 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence            3799999999999999999999999999999999864       45789999999999999999999999998864

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=5e-19  Score=161.97  Aligned_cols=71  Identities=46%  Similarity=0.748  Sum_probs=65.1

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .|||+||||+++|+.+|||+|||+|+++||||+++..     ...|+++|++|++||+||+||.+|+.||.+|..+
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~   73 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN-----KAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVD   73 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcc
Confidence            6999999999999999999999999999999998653     2368899999999999999999999999988653

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=3.7e-19  Score=153.93  Aligned_cols=69  Identities=38%  Similarity=0.590  Sum_probs=65.4

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ..++|+||||+++|+.++||++||+|+++||||+++++      +++..+|++||+||+||+||.+|..||++|.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~------P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~   98 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN------PEATDKFKEINTAYAILSDPTKRNVYDEYGE   98 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC------chhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence            57999999999999999999999999999999999874      7789999999999999999999999999864

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.77  E-value=3.8e-19  Score=162.02  Aligned_cols=97  Identities=38%  Similarity=0.532  Sum_probs=74.7

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCcchh
Q 027187           77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPMKAS  156 (227)
Q Consensus        77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~~  156 (227)
                      |||+||||+++|+.++||+|||+|+++||||+++.       +.++++|++|++||+||+||.+|+.||.++........
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~   73 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-------KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG   73 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccC
Confidence            79999999999999999999999999999999863       45789999999999999999999999998765432110


Q ss_pred             ----HHHHHHHHHhhhccchhhHHHHHHHHH
Q 027187          157 ----QAWMEWLIKKRKAFDQRGDMAIAAWAE  183 (227)
Q Consensus       157 ----~~~~~~~~~~r~~f~~~g~~~~~~~~~  183 (227)
                          ..+..+   ....|+.+.++|..+|++
T Consensus        74 ~~~~~~~~~~---~~~~~~~~~~~f~~~fg~  101 (354)
T TIGR02349        74 GGGGGGFNGF---DIGFFGDFGDIFGDFFGG  101 (354)
T ss_pred             cCCCCCcCCc---cccCcCchhhhHHHHhcc
Confidence                000000   001244567888888874

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.77  E-value=4.1e-19  Score=123.24  Aligned_cols=64  Identities=58%  Similarity=0.926  Sum_probs=59.7

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc
Q 027187           77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD  145 (227)
Q Consensus        77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD  145 (227)
                      |||+||||+++++.++||++|+++++++|||++....     ..+++.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~-----~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE-----AEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH-----HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh-----hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            5899999999999999999999999999999987741     468899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.77  E-value=6.2e-19  Score=161.92  Aligned_cols=70  Identities=41%  Similarity=0.720  Sum_probs=64.6

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.       +.++++|++|++||+||+||.+|+.||++|...
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-------~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~   72 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-------EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG   72 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence            3799999999999999999999999999999999864       358899999999999999999999999988654

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=6.1e-19  Score=162.62  Aligned_cols=70  Identities=44%  Similarity=0.731  Sum_probs=64.1

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc----cCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM----DNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~----~~~~  150 (227)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+      +.++++|++|++||+||+||.+|+.||+    ++..
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~   81 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD------AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG   81 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence            37999999999999999999999999999999998653      5688999999999999999999999998    6643

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=6.6e-19  Score=162.51  Aligned_cols=69  Identities=39%  Similarity=0.627  Sum_probs=64.3

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .|||+||||+++|+.+|||+|||+||++||||+++++      +.++++|++|++||+||+||++|+.||+++..
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~   69 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD------AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD   69 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence            4899999999999999999999999999999999753      56889999999999999999999999998864

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.1e-18  Score=161.34  Aligned_cols=69  Identities=41%  Similarity=0.706  Sum_probs=64.3

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .|||+||||+++|+.+|||+|||+|+++||||+++.+      +.++++|++|++||+||+||.+|+.||+++..
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~   71 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN------KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA   71 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc------hHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence            6999999999999999999999999999999998653      46889999999999999999999999998764

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=1.6e-18  Score=159.18  Aligned_cols=68  Identities=47%  Similarity=0.727  Sum_probs=63.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .|||+||||+++|+.+|||+|||+|+++||||+++.       +.++++|++|++||+||+||.+|+.||.++..
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-------~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~   70 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-------PGAEDRFKEINRAYEVLSDPETRARYDQFGEA   70 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------cCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence            699999999999999999999999999999999864       34789999999999999999999999998764

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.75  E-value=1.2e-18  Score=159.70  Aligned_cols=70  Identities=47%  Similarity=0.684  Sum_probs=65.4

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      ...+.||+||||.++|+..+||++||+||++||||+++..     .++++++|+.|+.||+|||||..|++||..
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-----ieeat~~F~~i~aAYeVLSdp~eR~wyd~h   74 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-----IEEATQQFQLIQAAYEVLSDPQERAWYDSH   74 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-----HHHHHHHHHHHHHHHHHhcChHhhhhHHHH
Confidence            3468999999999999999999999999999999998774     588999999999999999999999999985

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.7e-18  Score=153.70  Aligned_cols=70  Identities=43%  Similarity=0.690  Sum_probs=65.4

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ..|||+||||+++|+..|||+||++|+++||||.+..       +.+.++|++|.+||+||+|+++|..||..+...
T Consensus        42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-------~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~  111 (288)
T KOG0715|consen   42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-------KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ  111 (288)
T ss_pred             CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-------cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence            3499999999999999999999999999999999976       468999999999999999999999999998754

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=3.2e-18  Score=145.30  Aligned_cols=87  Identities=37%  Similarity=0.636  Sum_probs=74.7

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ...|+|+||||.++|+..+|++||++|++++|||+++.    +...+++++|++|+.||.||+|.++|+.||+.|..+..
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~e----ed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~   87 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHE----EDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDE   87 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchh----hhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCc
Confidence            34699999999999999999999999999999999863    24578999999999999999999999999999987743


Q ss_pred             ch--hHHHHHHHH
Q 027187          154 KA--SQAWMEWLI  164 (227)
Q Consensus       154 ~~--~~~~~~~~~  164 (227)
                      .+  ...|.+|+.
T Consensus        88 ~~d~~~~~~e~~~  100 (264)
T KOG0719|consen   88 SGDIDEDWLEFWR  100 (264)
T ss_pred             cchhhhHHHHHHH
Confidence            33  245666654

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.8e-18  Score=158.82  Aligned_cols=77  Identities=42%  Similarity=0.652  Sum_probs=70.5

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ++.+||.+|+|+++||.+|||+|||++++.|||||+.++   ++++.|++.|+.|.+|||||+||.+|+.||.+|..+..
T Consensus         7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dp---d~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDP---DQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCCh---hHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            456999999999999999999999999999999999754   35788999999999999999999999999999987664

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.73  E-value=7.6e-18  Score=166.01  Aligned_cols=74  Identities=27%  Similarity=0.358  Sum_probs=66.9

Q ss_pred             CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .....+||+||||+++|+..+||+|||+||++||||++++       +.+.++|+.|++||+||+||.+|+.||.+|..+
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~-------~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G  641 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSG-------NEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG  641 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------chHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence            3456899999999999999999999999999999999865       247889999999999999999999999998755


Q ss_pred             C
Q 027187          152 P  152 (227)
Q Consensus       152 ~  152 (227)
                      .
T Consensus       642 l  642 (1136)
T PTZ00341        642 I  642 (1136)
T ss_pred             c
Confidence            3

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.73  E-value=3.9e-18  Score=157.09  Aligned_cols=70  Identities=37%  Similarity=0.614  Sum_probs=65.1

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ..|||+||||+++|+.+|||+|||+||++||||+++.+      ++++++|++|++||+||+||.+|+.||+++..
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~   73 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD------KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA   73 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------hHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence            47999999999999999999999999999999998753      56899999999999999999999999998764

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=5e-18  Score=155.76  Aligned_cols=68  Identities=41%  Similarity=0.654  Sum_probs=63.2

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .|||+||||+++||.+|||+|||+++++||||+++.       ..++++|++|++||+||+||.+|+.||++|..
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   70 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-------KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD   70 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence            699999999999999999999999999999999863       34788999999999999999999999998764

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.72  E-value=8.6e-18  Score=154.09  Aligned_cols=68  Identities=41%  Similarity=0.617  Sum_probs=63.6

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      .|||+||||+++|+.++||+|||+|+++||||+++.       ..++++|++|++||+||+||.+|+.||.+|..
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~-------~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~   69 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-------KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA   69 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-------hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCc
Confidence            589999999999999999999999999999999864       45889999999999999999999999998864

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.71  E-value=8.9e-18  Score=150.39  Aligned_cols=67  Identities=43%  Similarity=0.668  Sum_probs=62.5

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      .|||+||||+++|+.+|||+|||+|+++||||+++.       ..++++|++|++||+||+||.+|+.||.++.
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-------~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~   70 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-------PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ   70 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence            699999999999999999999999999999999754       3588999999999999999999999999763

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.67  E-value=9.6e-17  Score=109.61  Aligned_cols=59  Identities=51%  Similarity=0.720  Sum_probs=54.0

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE  139 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~  139 (227)
                      .|||+||||+++++.++||++|+++++++|||++.+.     .+.+++.|.+|++||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-----~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----hHHHHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999999999999998752     3668899999999999999985

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.65  E-value=2.9e-16  Score=105.26  Aligned_cols=55  Identities=47%  Similarity=0.695  Sum_probs=51.0

Q ss_pred             CccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187           77 SPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID  137 (227)
Q Consensus        77 d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd  137 (227)
                      |||+||||+++++.++||++|+++++++|||++...      +.+.+.|.+|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~------~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHhcC
Confidence            699999999999999999999999999999998652      5678999999999999987

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=2.2e-16  Score=132.92  Aligned_cols=76  Identities=37%  Similarity=0.536  Sum_probs=68.7

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ..-|+|+||||+++++..|||+|||+|+++|||||++..      ...++.|..|++||+.|+|+..|..|..+|.++..
T Consensus        97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~------~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp  170 (230)
T KOG0721|consen   97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE------EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP  170 (230)
T ss_pred             hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc------chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence            457999999999999999999999999999999998763      45678899999999999999999999999987775


Q ss_pred             ch
Q 027187          154 KA  155 (227)
Q Consensus       154 ~~  155 (227)
                      ++
T Consensus       171 q~  172 (230)
T KOG0721|consen  171 QA  172 (230)
T ss_pred             cc
Confidence            44

>PHA03102 Small T antigen; Reviewed

Probab=99.64  E-value=3.6e-16  Score=126.63  Aligned_cols=70  Identities=20%  Similarity=0.239  Sum_probs=62.7

Q ss_pred             CCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           76 KSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        76 ~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ..+|+||||+++|  |.++||+|||++++++|||++++          +++|++|++||++|+|+.+|..||.++.....
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~   74 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----------EEKMKELNTLYKKFRESVKSLRDLDGEEDSSS   74 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----------hHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence            5689999999999  99999999999999999999643          47999999999999999999999999876554


Q ss_pred             ch
Q 027187          154 KA  155 (227)
Q Consensus       154 ~~  155 (227)
                      ..
T Consensus        75 ~~   76 (153)
T PHA03102         75 EE   76 (153)
T ss_pred             cc
Confidence            43

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.62  E-value=1.1e-15  Score=147.93  Aligned_cols=70  Identities=39%  Similarity=0.620  Sum_probs=64.1

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      .|||+||||+++|+.++||+|||+|+++||||++..       ..+.++|++|++||++|+||.+|+.||.++..+.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-------~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~   71 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-------PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV   71 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence            699999999999999999999999999999999864       3577899999999999999999999999876443

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.61  E-value=1.1e-15  Score=126.97  Aligned_cols=68  Identities=49%  Similarity=0.664  Sum_probs=63.4

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccc-hHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGE-TAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~-~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      ...+||+||||+++|+..+|++|||+++++||||+++.+      + .+.+.|+.|++||+||+|+..|..||..
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD------PKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            357999999999999999999999999999999999874      3 4889999999999999999999999985

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.56  E-value=5e-15  Score=122.43  Aligned_cols=72  Identities=19%  Similarity=0.314  Sum_probs=61.1

Q ss_pred             CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      .|||+||||++.  ++..+|+++|+++++++|||++.+.+ ..+...+.+.+..|++||+||+||.+|+.|+-..
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~-~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l   74 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANAS-ERERLLAVQQAATINDAYQTLKHPLKRAEYLLSL   74 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHh
Confidence            489999999996  67899999999999999999986642 2223456789999999999999999999998643

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.56  E-value=3.2e-15  Score=134.09  Aligned_cols=76  Identities=39%  Similarity=0.652  Sum_probs=68.8

Q ss_pred             CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ....+|||+||||.++|+..||.+|||++|.+||||...+.   +++..|+.+|..|..|-+||+||++|+.+|.+-++
T Consensus       390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdE---eEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP  465 (504)
T KOG0624|consen  390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDE---EEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP  465 (504)
T ss_pred             HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCH---HHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence            35679999999999999999999999999999999998763   45678999999999999999999999999998643

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.52  E-value=1.3e-14  Score=119.40  Aligned_cols=71  Identities=21%  Similarity=0.294  Sum_probs=60.0

Q ss_pred             CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      .|||++|||++.  ++..+|+++|+++++++|||++...   .+...+.+.+..|++||+||+||.+|+.|+-...
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~---~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~   74 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTL---QEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ   74 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence            589999999996  7899999999999999999998642   1233455678899999999999999999986543

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.51  E-value=3e-14  Score=117.87  Aligned_cols=74  Identities=23%  Similarity=0.366  Sum_probs=63.1

Q ss_pred             CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      ...|||++|||++.  .+..+|+++|+++++++|||++.+.. ..++..+.+.+..||+||+||+||.+|+.|+-..
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~-~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l   77 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAP-EREQRLALERSASLNEAYQTLKSPPRRARYLLAL   77 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            35899999999997  57899999999999999999986642 2234457788999999999999999999999644

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.50  E-value=3.1e-14  Score=118.18  Aligned_cols=72  Identities=24%  Similarity=0.375  Sum_probs=60.5

Q ss_pred             CCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           75 EKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        75 ~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      ..|||+||||++.  ++..+|+++|+++++++|||++...+ ..++..+.+.+..||+||++|+||.+|+.|+-.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~-~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~   78 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAG-DAEKRVAMQWATRANEAYQTLRDPLKRARYLLH   78 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence            4799999999995  68899999999999999999987642 222334566789999999999999999999953

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.44  E-value=8.7e-14  Score=128.00  Aligned_cols=72  Identities=31%  Similarity=0.510  Sum_probs=66.6

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      ...|+|.+|||+.+++.++||+.||++|...|||||..       +.|++.|+.|+.||++|+|+++|..||..+..+.
T Consensus       233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~-------~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ken  304 (490)
T KOG0720|consen  233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI-------PRAEEAFKKLQVAFEVIGDSVKRKEYDLELKKEN  304 (490)
T ss_pred             cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC-------hhHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence            37899999999999999999999999999999999975       6799999999999999999999999999876444

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.43  E-value=8.9e-14  Score=119.75  Aligned_cols=74  Identities=35%  Similarity=0.576  Sum_probs=67.0

Q ss_pred             CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .+...|.|+||||.++++..||.+|||+|+++||||++.+       +++.+.|..|..||++|.|.+.|..||-.....
T Consensus        29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-------~e~k~~F~~iAtayeilkd~e~rt~ydyaldhp  101 (329)
T KOG0722|consen   29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-------PESKKLFVKIATAYEILKDNETRTQYDYALDHP  101 (329)
T ss_pred             cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-------chhhhhhhhhhcccccccchhhHHhHHHHhcCc
Confidence            5567999999999999999999999999999999999977       456689999999999999999999999887644


Q ss_pred             C
Q 027187          152 P  152 (227)
Q Consensus       152 ~  152 (227)
                      .
T Consensus       102 d  102 (329)
T KOG0722|consen  102 D  102 (329)
T ss_pred             h
Confidence            3

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.42  E-value=8.1e-14  Score=127.19  Aligned_cols=79  Identities=34%  Similarity=0.557  Sum_probs=70.9

Q ss_pred             CCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           71 NWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        71 ~~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ..+..++||.||||..+++..+||+||+++++.+|||++...     +.+++.+|++|.+||.||+||.+|..||.+-+.
T Consensus       368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-----q~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl  442 (486)
T KOG0550|consen  368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-----QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL  442 (486)
T ss_pred             HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-----hHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence            345678999999999999999999999999999999999874     578999999999999999999999999998665


Q ss_pred             CCcc
Q 027187          151 NPMK  154 (227)
Q Consensus       151 ~~~~  154 (227)
                      .++.
T Consensus       443 e~~~  446 (486)
T KOG0550|consen  443 EEVG  446 (486)
T ss_pred             hhhc
Confidence            5543

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.40  E-value=2.7e-13  Score=119.46  Aligned_cols=65  Identities=35%  Similarity=0.486  Sum_probs=56.9

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCcc-ccchHHHHHHHHHHHHHHcCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLE-KGETAEAKFIKIQAAYELLID  137 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~-~~~~a~~~f~~I~~AY~vLsd  137 (227)
                      ....++|+||||++++|.++||++||+|+++||||++.+.+.++ ..+.++++|++|++||++|+.
T Consensus       197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            34579999999999999999999999999999999987765433 346789999999999999975

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.37  E-value=4.8e-13  Score=116.12  Aligned_cols=70  Identities=47%  Similarity=0.673  Sum_probs=63.0

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ..|||+||||.++|+.++|++||++++++||||+++..     ...++.+|.+|.+||++|+|+.+|..||.++.
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-----~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~   71 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-----KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE   71 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-----hhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence            37999999999999999999999999999999997552     23566689999999999999999999999987

>PHA02624 large T antigen; Provisional

Probab=99.37  E-value=9.4e-13  Score=126.19  Aligned_cols=83  Identities=23%  Similarity=0.380  Sum_probs=67.3

Q ss_pred             CCCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh--cccC-
Q 027187           74 DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY--DMDN-  148 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y--D~~~-  148 (227)
                      +..++|++|||+++|  +.++||+|||+++++||||+..+          +++|++|++||++|+|+.+|..|  |... 
T Consensus         9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----------eekfk~Ln~AYevL~d~~k~~r~~fd~~~~   78 (647)
T PHA02624          9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----------EEKMKRLNSLYKKLQEGVKSARQSFGTQDS   78 (647)
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----------HHHHHHHHHHHHHHhcHHHhhhcccccccc
Confidence            357899999999999  99999999999999999999532          57999999999999999999999  5431 


Q ss_pred             CCCCcchhHHHHHHHHHh
Q 027187          149 RVNPMKASQAWMEWLIKK  166 (227)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~  166 (227)
                      ..-+..+...|.+|+..+
T Consensus        79 ~~v~~~~~~~w~~ww~~f   96 (647)
T PHA02624         79 SEIPTYGTPEWEQWWEEF   96 (647)
T ss_pred             cCCCCCccccHHHHHHHh
Confidence            111233556788877644

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.34  E-value=1.3e-12  Score=101.05  Aligned_cols=52  Identities=27%  Similarity=0.367  Sum_probs=47.0

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI  136 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLs  136 (227)
                      ..++|+||||+++++.+|||++||+|++++|||+..+          .+.|++|++||++|.
T Consensus        64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----------~~~~~kIneAyevL~  115 (116)
T PTZ00100         64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----------TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHHh
Confidence            4799999999999999999999999999999998422          468899999999985

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.33  E-value=1.1e-12  Score=120.55  Aligned_cols=78  Identities=33%  Similarity=0.455  Sum_probs=71.9

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      --|+|+||||+.+++..+||++||+|+.++||||.+. -+++.+.+.++.+.+|++||+.|+|...|+.|-.+|.++..
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~-mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p  174 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP-MVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP  174 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCC-CChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence            4699999999999999999999999999999999877 45667888999999999999999999999999999987764

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.26  E-value=9.7e-12  Score=102.97  Aligned_cols=72  Identities=22%  Similarity=0.322  Sum_probs=62.2

Q ss_pred             CCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           76 KSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        76 ~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      .|||++|||++.  .+...+++.|+.+.+++|||+....+ ..++..+.+.-..||+||.+|+||.+|+.|=-.+
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~-~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L   75 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSS-AQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL   75 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCC-HHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence            589999999996  89999999999999999999987753 3334566778899999999999999999997643

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.10  E-value=1.5e-10  Score=94.47  Aligned_cols=61  Identities=23%  Similarity=0.420  Sum_probs=51.2

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           88 ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        88 as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      .+..+|+++|+++++++|||+.+..+. .++..+.+.+..|++||+||+||.+|+.|+-.+.
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~-~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~   63 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSA-QEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH   63 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCCh-hhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence            467899999999999999999866432 2234577899999999999999999999997654

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.01  E-value=5.4e-10  Score=93.46  Aligned_cols=67  Identities=30%  Similarity=0.529  Sum_probs=60.3

Q ss_pred             CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHh
Q 027187           72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQ  143 (227)
Q Consensus        72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~  143 (227)
                      .-=+-|+|+||.|.|..+.++||+.||+|++..|||+|+++     .+.|...|..|.+||.+|-|+..|..
T Consensus        49 tyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd-----~~rAqkAFdivkKA~k~l~n~~~rkr  115 (250)
T KOG1150|consen   49 TYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD-----AERAQKAFDIVKKAYKLLENDKIRKR  115 (250)
T ss_pred             cccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc-----HHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            33468999999999999999999999999999999999885     47899999999999999999985544

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=99.00  E-value=3.9e-10  Score=98.27  Aligned_cols=71  Identities=32%  Similarity=0.387  Sum_probs=62.5

Q ss_pred             CCCCccccccCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           74 DEKSPYETLELER---DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        74 ~~~d~Y~iLgv~~---~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      ...|+|.+|||+.   .++..+|.++.++.+.+||||+....|    .....+.|..|+.||+||+|+.+|..||.--
T Consensus        41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g----~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGG----NKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccC----CCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            3489999999996   689999999999999999999985554    3456789999999999999999999999853

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.38  E-value=4.6e-07  Score=90.93  Aligned_cols=63  Identities=25%  Similarity=0.368  Sum_probs=51.8

Q ss_pred             HhhccCCCCCCCccccccCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187           66 VVSAANWADEKSPYETLELERD----ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID  137 (227)
Q Consensus        66 ~~~~~~~~~~~d~Y~iLgv~~~----as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd  137 (227)
                      ..+.+......+.|+||.|+-+    ...+.||++|++||.+||||||+.         ..++|..+++||+.|+.
T Consensus      1271 lekKP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---------GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1271 LEKKPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---------GREMFERVNKAYELLSS 1337 (2235)
T ss_pred             HhcCCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---------HHHHHHHHHHHHHHHHH
Confidence            3344445566789999999863    355899999999999999999855         57999999999999984

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.33  E-value=3.5e-07  Score=78.47  Aligned_cols=76  Identities=26%  Similarity=0.447  Sum_probs=56.8

Q ss_pred             cchhhhhhHHHhhccCCCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHH-H
Q 027187           56 SWFRVNQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE-L  134 (227)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~-v  134 (227)
                      +.|...+-++....-+...-..+|.||||..+|+.++++.+|..|++++|||....       +...+.|.+|.+||. |
T Consensus        27 pyfgiirnrll~~~kske~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-------~adaa~f~qideafrkv   99 (342)
T KOG0568|consen   27 PYFGIIRNRLLHLHKSKEKIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-------EADAARFIQIDEAFRKV   99 (342)
T ss_pred             chhhhHHHHHHHHhhhHHHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-------cccHHHHHHHHHHHHHH
Confidence            34444444433332222234689999999999999999999999999999998754       335679999999998 7


Q ss_pred             cCCh
Q 027187          135 LIDE  138 (227)
Q Consensus       135 Lsdp  138 (227)
                      |+..
T Consensus       100 lq~~  103 (342)
T KOG0568|consen  100 LQEK  103 (342)
T ss_pred             HHHH
Confidence            7643

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.04  E-value=7.7e-06  Score=62.06  Aligned_cols=53  Identities=28%  Similarity=0.265  Sum_probs=45.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE  138 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp  138 (227)
                      +..-.||||+++++.+.||.|+|+.....|||+...+          -.-.+|+||+++|...
T Consensus        56 ~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP----------YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   56 REAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP----------YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH----------HHHHHHHHHHHHHhcc
Confidence            4455799999999999999999999999999998663          4556799999999753

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.71  E-value=5e-05  Score=61.48  Aligned_cols=74  Identities=20%  Similarity=0.314  Sum_probs=58.3

Q ss_pred             CCCCCccccccCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           73 ADEKSPYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~--~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      +...+||.++|...  ..++..++.-|....++.|||+...... .....|.+....|++||.+|.||-+|+.|=.-
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~-~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk   80 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFA-GDTDQASEQSAELNKAYDTLKDPLARARYLLK   80 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCccccccccc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            45689999998654  4566777779999999999999544321 12346888999999999999999999999754

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.26  E-value=0.00015  Score=60.12  Aligned_cols=62  Identities=35%  Similarity=0.477  Sum_probs=53.3

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccc-cchHHHHHHHHHHHHHHc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEK-GETAEAKFIKIQAAYELL  135 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~-~~~a~~~f~~I~~AY~vL  135 (227)
                      ...+.|.+||+...++..+|+++|+++...+|||+....+.+.+ -..+.+++++|++||+-+
T Consensus       111 ~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         111 DREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             cchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            34799999999999999999999999999999999877654433 467889999999999854

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=96.73  E-value=0.0014  Score=62.11  Aligned_cols=52  Identities=29%  Similarity=0.392  Sum_probs=39.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCc-cccchHHHHHHHHHHHHHHc
Q 027187           84 LERDADEEQIKVAYRRLAKFYHPDVYDGRGTL-EKGETAEAKFIKIQAAYELL  135 (227)
Q Consensus        84 v~~~as~~eIK~aYr~la~~~HPDk~~~~~~~-~~~~~a~~~f~~I~~AY~vL  135 (227)
                      +..-.+.++||++||+.++..||||.+..|.. ..+-.+++.|-.+++|++.-
T Consensus       396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f  448 (453)
T KOG0431|consen  396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF  448 (453)
T ss_pred             hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence            44456899999999999999999999887532 22346777777778877654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.44  E-value=0.0017  Score=53.71  Aligned_cols=72  Identities=25%  Similarity=0.409  Sum_probs=54.2

Q ss_pred             CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           77 SPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        77 d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      +++..+|.++.+  ..+.++..|+.+.+.||||+....+. .+...+.+.+..++.||.+|.||-.|..|=-...
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~-~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~   75 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASE-AEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA   75 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccch-HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence            345556666543  55678999999999999999866431 1123355789999999999999999999986554

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=94.06  E-value=0.11  Score=41.08  Aligned_cols=54  Identities=22%  Similarity=0.189  Sum_probs=38.7

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE  139 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~  139 (227)
                      .....||||++..+.++|.+.|.+|-...+|++...          --.-..|..|.+.|....
T Consensus        58 ~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----------fYLQSKV~rAKErl~~El  111 (127)
T PF03656_consen   58 DEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----------FYLQSKVFRAKERLEQEL  111 (127)
T ss_dssp             HHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----------HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----------HHHHHHHHHHHHHHHHHH
Confidence            466799999999999999999999999999997643          234446888888886544

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=85.83  E-value=1.4  Score=34.00  Aligned_cols=52  Identities=17%  Similarity=0.302  Sum_probs=41.0

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChh
Q 027187           86 RDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEE  139 (227)
Q Consensus        86 ~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~  139 (227)
                      +..+..+++.|.|.+-++.|||.....  ++++...++-++.|+.-.+.|..+.
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~--P~~k~~Ne~SLk~Ln~~Ld~l~~~~   55 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQH--PEEKQVNEESLKLLNSYLDSLKKRK   55 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccC--hHHHHhhHHHHHHHHHHHHHHhccC
Confidence            345678899999999999999987652  4456667778888888888887654

>PF13446 RPT: A repeated domain in UCH-protein

Probab=84.70  E-value=1.4  Score=29.89  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=25.1

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHH
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAK  102 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~  102 (227)
                      .+.|++|||+++.+.+.|-.+|+....
T Consensus         5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    5 EEAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            567999999999999999999999887

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=82.98  E-value=2.1  Score=36.16  Aligned_cols=40  Identities=38%  Similarity=0.449  Sum_probs=31.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCCh
Q 027187           85 ERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE  138 (227)
Q Consensus        85 ~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp  138 (227)
                      +++|+.|||.+|+.++..+|--|              ++.-.+|-.||+.+.=.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd--------------~~~~~~IEaAYD~ILM~   40 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD--------------EKSREAIEAAYDAILME   40 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC--------------HHHHHHHHHHHHHHHHH
Confidence            47899999999999999999444              24566799999876433

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	227
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		3e-08
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		5e-08
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		1e-07
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		2e-07
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-07
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-07
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-07
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		6e-07
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		9e-07
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-06
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		6e-06
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-05
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-05
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-05
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-05
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-04
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-04
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		4e-04
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		5e-04
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		7e-04

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 78  PYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
           PY  L + R A +  IK AY++LA+ +HPD         K   AE +FI+I  AYE+L +
Sbjct: 19  PYRVLGVSRTASQADIKKAYKKLAREWHPDK-------NKDPGAEDRFIQISKAYEILSN 71
Query: 138 EERRRQYD 145
           EE+R  YD
Sbjct: 72  EEKRTNYD 79

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 70  ANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQ 129
           +N  + K  Y  L ++   D + IK AYRRLA+ YHPDV        K   AEAKF  + 
Sbjct: 22  SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDV-------SKENDAEAKFKDLA 74
Query: 130 AAYELLIDEERRRQYD 145
            A+E+L DE+RR +YD
Sbjct: 75  EAWEVLKDEQRRAEYD 90

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + R+A +++IK AY +LAK YHPD      T +    A+ KF ++  AYE+L DE
Sbjct: 10  YQILGVPRNASQKEIKKAYYQLAKKYHPD------TNKDDPKAKEKFSQLAEAYEVLSDE 63
Query: 139 ERRRQYD 145
            +R+QYD
Sbjct: 64  VKRKQYD 70

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + + A E QIK A+ +LA  YHPD         K   AEAKF +I  AYE L D 
Sbjct: 10  YDILGVPKSASERQIKKAFHKLAMKYHPDK-------NKSPDAEAKFREIAEAYETLSDA 62
Query: 139 ERRRQYDM 146
            RR++YD 
Sbjct: 63  NRRKEYDT 70

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + + A+E +I+ AY+RLA  YHPD   G       + AEAKF +I+ AYE+L D 
Sbjct: 6   YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD------KEAEAKFKEIKEAYEVLTDS 59
Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 60  QKRAAYD 66

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + + A+E +I+ AY+RLA  YHPD   G       + AEAKF +I+ AYE+L D 
Sbjct: 6   YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG------DKEAEAKFKEIKEAYEVLTDS 59
Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 60  QKRAAYD 66

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + + A+E +I+ AY+RLA  YHPD   G       + AEAKF +I+ AYE+L D 
Sbjct: 6   YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD------KEAEAKFKEIKEAYEVLTDS 59
Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 60  QKRAAYD 66

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + R A +E +K AYRRLA  +HPD     G  E        F  I  AY +L + 
Sbjct: 10  YEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATE-------AFKAIGTAYAVLSNP 62
Query: 139 ERRRQYD 145
           E+R+QYD
Sbjct: 63  EKRKQYD 69

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y  + ++   D + IK AYRRLA+ YHPDV        K   AEA+F ++  A+E+L
Sbjct: 5   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV-------SKEPDAEARFKEVAEAWEVL 57
Query: 136 IDEERRRQYD 145
            DE+RR +YD
Sbjct: 58  SDEQRRAEYD 67

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L++ R A  E IK AYR+LA  +HPD        E  E AE +F ++  AYE+L D 
Sbjct: 12  YEVLDVPRQASSEAIKKAYRKLALKWHPDK-----NPENKEEAERRFKQVAEAYEVLSDA 66
Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 67  KKRDIYD 73

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++  A  E IK AYR+LA  +HPD        +  E AE KF  +  AYE+L D 
Sbjct: 12  YEVLGVQASASPEDIKKAYRKLALRWHPDK-----NPDNKEEAEKKFKLVSEAYEVLSDS 66
Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 67  KKRSLYD 73

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y+TL L R A +E+IK AYRR A  YHPD         K   AE KF +I  AY++L
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDK-------NKEPGAEEKFKEIAEAYDVL 55
Query: 136 IDEERRRQYD 145
            D  +R  +D
Sbjct: 56  SDPRKREIFD 65

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           E + Y+ L ++ +A +E++K AYR+LA  YHPD         K      KF +I  AYE+
Sbjct: 5   ETTYYDVLGVKPNATQEELKKAYRKLALKYHPD---------KNPNEGEKFKQISQAYEV 55
Query: 135 LIDEERRRQYD 145
           L D ++R  YD
Sbjct: 56  LSDAKKRELYD 66

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L++ R A  + IK AYRR A  +HPD        +  E AE KF ++  AYE+L D+
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDK-----NPDNKEFAEKKFKEVAEAYEVLSDK 59
Query: 139 ERRRQYD 145
            +R  YD
Sbjct: 60  HKREIYD 66

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           E   Y+ L ++ DA + ++K AYR++A  +HPD         K      +F +I  AYE+
Sbjct: 7   ETGYYDVLGVKPDASDNELKKAYRKMALKFHPD---------KNPDGAEQFKQISQAYEV 57
Query: 135 LIDEERRRQYD 145
           L DE++R+ YD
Sbjct: 58  LSDEKKRQIYD 68

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           +S Y  L L+++A  + IK +YR+LA  YHPD        +  E A+ KF +I  A+ +L
Sbjct: 17  ESLYHVLGLDKNATSDDIKKSYRKLALKYHPDK-----NPDNPEAAD-KFKEINNAHAIL 70
Query: 136 IDEERRRQYD 145
            D  +R  YD
Sbjct: 71  TDATKRNIYD 80

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L + + A   +I+ A+++LA   HPD             A   F+KI  AYE+L DE
Sbjct: 24  YSLLGVSKTASSREIRQAFKKLALKLHPD------KNPNNPNAHGDFLKINRAYEVLKDE 77
Query: 139 ERRRQYD 145
           + R++YD
Sbjct: 78  DLRKKYD 84

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L + + A   +I+ A+++LA   HPD             A   F+KI  AYE+L DE
Sbjct: 5   YSLLGVSKTASSREIRQAFKKLALKLHPD------KNPNNPNAHGDFLKINRAYEVLKDE 58
Query: 139 ERRRQYD 145
           + R++YD
Sbjct: 59  DLRKKYD 65

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L +   A + QIK AY R    YHPD   G       E AE +F +I  AY +L   
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSG-----SAEAAE-RFTRISQAYVVLGSA 73
Query: 139 ERRRQYD 145
             RR+YD
Sbjct: 74  TLRRKYD 80

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDG---RGTLEKGETAEAKFIKIQAAYELL 135
           Y  L  +  A+   +K  Y++L   YHPD        GT+E+      KFI+I  A+++L
Sbjct: 19  YSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE---CMQKFIEIDQAWKIL 75
Query: 136 IDEERRRQYDMDNRVNP 152
            +EE +++YD+  R  P
Sbjct: 76  GNEETKKKYDL-QRSGP 91

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	227
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	1e-23
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	3e-23
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	7e-22
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-21
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	4e-20
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	4e-20
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	6e-20
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	7e-20
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	8e-20
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	1e-19
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	2e-19
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-19
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	2e-19
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	3e-19
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	4e-19
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	5e-19
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	5e-18
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	1e-17
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	2e-17
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	6e-17
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	2e-16
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	3e-15
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	4e-15
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	8e-15
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	9e-15
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-12
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-11
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	1e-09
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-09
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-09
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	2e-08
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-08
2guz_A	71	Mitochondrial import inner membrane translocase su	1e-07
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	2e-06

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 7/72 (9%)

Query: 74  DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE 133
           + K  Y  L ++   D + IK AYRRLA+ YHPDV        K   AEAKF  +  A+E
Sbjct: 26  ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDV-------SKENDAEAKFKDLAEAWE 78

Query: 134 LLIDEERRRQYD 145
           +L DE+RR +YD
Sbjct: 79  VLKDEQRRAEYD 90

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 90.7 bits (225), Expect = 3e-23
 Identities = 23/72 (31%), Positives = 37/72 (51%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           +K  Y  L  +  A+   +K  Y++L   YHPD           E    KFI+I  A+++
Sbjct: 9   KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKI 68

Query: 135 LIDEERRRQYDM 146
           L +EE +R+YD+
Sbjct: 69  LGNEETKREYDL 80

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 85.2 bits (211), Expect = 7e-22
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L  +  A+   +K  Y++L   YHPD           E    KFI+I  A+++L +E
Sbjct: 19  YSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE 78

Query: 139 ERRRQYDM 146
           E +++YD+
Sbjct: 79  ETKKKYDL 86

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 83.2 bits (206), Expect = 3e-21
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
           A +  PY  L + R A +  IK AY++LA+ +HPD         K   AE +FI+I  AY
Sbjct: 14  ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDK-------NKDPGAEDRFIQISKAY 66

Query: 133 ELLIDEERRRQYD 145
           E+L +EE+R  YD
Sbjct: 67  EILSNEEKRTNYD 79

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 80.0 bits (198), Expect = 4e-20
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
                 YE L + R A +E +K AYRRLA  +HPD             A   F  I  AY
Sbjct: 4   GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDK-------NHAPGATEAFKAIGTAY 56

Query: 133 ELLIDEERRRQYD 145
            +L + E+R+QYD
Sbjct: 57  AVLSNPEKRKQYD 69

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 80.7 bits (200), Expect = 4e-20
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L + + A+E +I+ AY+RLA  YHPD   G       + AEAKF +I+ AYE+L D 
Sbjct: 6   YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG------DKEAEAKFKEIKEAYEVLTDS 59

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 60  QKRAAYD 66

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 79.5 bits (197), Expect = 6e-20
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+TL L R A +E+IK AYRR A  YHPD         K   AE KF +I  AY++L D 
Sbjct: 6   YQTLGLARGASDEEIKRAYRRQALRYHPDK-------NKEPGAEEKFKEIAEAYDVLSDP 58

Query: 139 ERRRQYD 145
            +R  +D
Sbjct: 59  RKREIFD 65

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 79.7 bits (197), Expect = 7e-20
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 7/67 (10%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + + A E QIK A+ +LA  YHPD         K   AEAKF +I  AYE L D 
Sbjct: 10  YDILGVPKSASERQIKKAFHKLAMKYHPDK-------NKSPDAEAKFREIAEAYETLSDA 62

Query: 139 ERRRQYD 145
            RR++YD
Sbjct: 63  NRRKEYD 69

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 80.1 bits (198), Expect = 8e-20
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L++ R A  + IK AYRR A  +HPD           E AE KF ++  AYE+L D+
Sbjct: 5   YEILDVPRSASADDIKKAYRRKALQWHPDKNPD-----NKEFAEKKFKEVAEAYEVLSDK 59

Query: 139 ERRRQYD 145
            +R  YD
Sbjct: 60  HKREIYD 66

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 79.8 bits (197), Expect = 1e-19
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L +   A + QIK AY R    YHPD   G         A  +F +I  AY +L   
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSG------SAEAAERFTRISQAYVVLGSA 73

Query: 139 ERRRQYD 145
             RR+YD
Sbjct: 74  TLRRKYD 80

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 79.4 bits (196), Expect = 2e-19
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
            D +  Y  L  +  +  EQI   ++  A   HPD +           A   F K+Q A 
Sbjct: 17  EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPE------NPKAVETFQKLQKAK 70

Query: 133 ELLIDEERRRQYD 145
           E+L +EE R +YD
Sbjct: 71  EILTNEESRARYD 83

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 81.8 bits (202), Expect = 2e-19
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           ++ Y  L + + A   +I+ A+++LA   HPD             A   F+KI  AYE+L
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN------NPNAHGDFLKINRAYEVL 55

Query: 136 IDEERRRQYD 145
            DE+ R++YD
Sbjct: 56  KDEDLRKKYD 65

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 78.1 bits (193), Expect = 2e-19
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y+ L + R+A +++IK AY +LAK YHPD             A+ KF ++  AYE+L DE
Sbjct: 10  YQILGVPRNASQKEIKKAYYQLAKKYHPDTNKD------DPKAKEKFSQLAEAYEVLSDE 63

Query: 139 ERRRQYD 145
            +R+QYD
Sbjct: 64  VKRKQYD 70

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 78.1 bits (193), Expect = 3e-19
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L ++  A  E IK AYR+LA  +HPD         K E AE KF  +  AYE+L D 
Sbjct: 12  YEVLGVQASASPEDIKKAYRKLALRWHPDKNPD----NKEE-AEKKFKLVSEAYEVLSDS 66

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 67  KKRSLYD 73

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 77.3 bits (191), Expect = 4e-19
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           YE L++ R A  E IK AYR+LA  +HPD         K E AE +F ++  AYE+L D 
Sbjct: 12  YEVLDVPRQASSEAIKKAYRKLALKWHPDKNPE----NKEE-AERRFKQVAEAYEVLSDA 66

Query: 139 ERRRQYD 145
           ++R  YD
Sbjct: 67  KKRDIYD 73

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 78.2 bits (193), Expect = 5e-19
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 75  EKSPYETLELERDA-DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYE 133
            ++ Y+ LE+ R+  D++++  AYR LA+ +HPD    +   E+   AE +F  I  AYE
Sbjct: 14  LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNK---EEKLLAEERFRVIATAYE 70

Query: 134 LLIDEERRRQYD 145
            L D+E +  YD
Sbjct: 71  TLKDDEAKTNYD 82

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 75.5 bits (186), Expect = 5e-18
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
           Y  L L+++A  + IK +YR+LA  YHPD             A  KF +I  A+ +L D 
Sbjct: 20  YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPD------NPEAADKFKEINNAHAILTDA 73

Query: 139 ERRRQYD 145
            +R  YD
Sbjct: 74  TKRNIYD 80

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 73.9 bits (182), Expect = 1e-17
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 9/73 (12%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
             E   Y+ L +   A+E+++K  YR+ A  YHPD         K      KF +I  A+
Sbjct: 5   VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPD---------KPTGDTEKFKEISEAF 55

Query: 133 ELLIDEERRRQYD 145
           E+L D ++R  YD
Sbjct: 56  EILNDPQKREIYD 68

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 72.7 bits (179), Expect = 2e-17
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
             E   Y+ L ++ DA + ++K AYR++A  +HPD         K      +F +I  AY
Sbjct: 5   VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPD---------KNPDGAEQFKQISQAY 55

Query: 133 ELLIDEERRRQYD 145
           E+L DE++R+ YD
Sbjct: 56  EVLSDEKKRQIYD 68

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 72.1 bits (177), Expect = 6e-17
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
            K  ++ L ++  A  +++  AYR+LA   HPD             +E  F  +  A   
Sbjct: 26  SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDK-------CVAPGSEDAFKAVVNARTA 78

Query: 135 LIDEERRRQYD 145
           L+   +     
Sbjct: 79  LLKNIKSGPSS 89

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 61  NQRRTVVSAANWADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGET 120
                       + ++  Y+ L ++R+A +++I  AYR+LA  +HPD +      +K   
Sbjct: 367 EGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKK--- 423

Query: 121 AEAKFIKIQAAYELLIDEERRRQYDM 146
           AE KFI I AA E+L D E R+++D 
Sbjct: 424 AEKKFIDIAAAKEVLSDPEMRKKFDD 449

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 68.7 bits (168), Expect = 3e-15
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 12/74 (16%)

Query: 74  DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
           +     + L LER A  +   ++ AY +  K +HPD         KG   E K  K+   
Sbjct: 6   ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPD---------KG-GDEEKMKKMNTL 55

Query: 132 YELLIDEERRRQYD 145
           Y+ + D  +     
Sbjct: 56  YKKMEDGVKYAHQP 69

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 69.6 bits (170), Expect = 4e-15
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 12/75 (16%)

Query: 73  ADEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQA 130
            +     + L LER A  +   ++ AY +  K +HPD         KG   E K  K+  
Sbjct: 8   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPD---------KG-GDEEKMKKMNT 57

Query: 131 AYELLIDEERRRQYD 145
            Y+ + D  +     
Sbjct: 58  LYKKMEDGVKYAHQP 72

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 72.1 bits (176), Expect = 8e-15
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 73  ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAY 132
             +++ Y  L + + A   +I+ A+++LA   HPD             A   F+KI  AY
Sbjct: 18  RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN------PNAHGDFLKINRAY 71

Query: 133 ELLIDEERRRQYDMDNRVNPMKASQAWMEW 162
           E+L DE+ R++YD               E 
Sbjct: 72  EVLKDEDLRKKYDKYGEKGLEDNQGGQYES 101

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 66.3 bits (162), Expect = 9e-15
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 79  YETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDE 138
              +E      E + K   RRL   +HPD        E  + A   F  +Q     L   
Sbjct: 19  TSVVEQAWKLPESERKKIIRRLYLKWHPDK-----NPENHDIANEVFKHLQNEINRL--- 70

Query: 139 ERRRQYD 145
           E++   D
Sbjct: 71  EKQAFLD 77

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 59.6 bits (144), Expect = 2e-11
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 78  PYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
            +    L      D + + + ++ L + YHPD +      E+   A  +   I  A++ L
Sbjct: 3   YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ-LAAVQQSATINQAWQTL 61

Query: 136 IDEERRRQYDMD 147
                R +Y + 
Sbjct: 62  RHPLMRAEYLLS 73

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 55.5 bits (133), Expect = 1e-09
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 74  DEKSPYETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
             +  +  ++  R    D  +++  Y++L +  HPD +  R   EK + +E     +  A
Sbjct: 41  PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEK-DFSEKHSTLVNDA 99

Query: 132 YELLIDEERRRQYDMDNR 149
           Y+ L+    R  Y +   
Sbjct: 100 YKTLLAPLSRGLYLLKLH 117

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
           WA E + ++ + +      EQ+K  YR+     HPD   G+      + A+  F+++  A
Sbjct: 114 WAGE-TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQ---PYEQYAKMIFMELNDA 169

Query: 132 YELLIDEERRRQY 144
           +    ++ ++  Y
Sbjct: 170 WSEFENQGQKPLY 182

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 12/76 (15%)

Query: 73  ADEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQA 130
           AD++   E L+L R    D  +++ AY++ +   HPD         KG +      ++ +
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPD---------KGGSHA-LMQELNS 57

Query: 131 AYELLIDEERRRQYDM 146
            +     E    + ++
Sbjct: 58  LWGTFKTEVYNLRMNL 73

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 51.5 bits (123), Expect = 2e-08
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 87  DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM 146
             D+ +++  YR+L   +HPD+          +    +   +  AY  L D  RR QY +
Sbjct: 29  TIDQSRLRKEYRQLQAQHHPDMA---------QQGSEQSSTLNQAYHTLKDPLRRSQYML 79

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRG-TLEKGETAEAKFIKIQAAYE 133
             S ++ + L    +   ++ +Y+R     HPD    +G +  +   AE  F  +Q A++
Sbjct: 39  SGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWD 98

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 46.6 bits (111), Expect = 1e-07
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 11/65 (16%)

Query: 79  YETLELERDA-DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID 137
            + L L  +   ++++K  +R++    HPD         KG +      KI  A + L  
Sbjct: 17  LQILNLTENTLTKKKLKEVHRKIMLANHPD---------KGGSPF-LATKINEAKDFLEK 66

Query: 138 EERRR 142
               +
Sbjct: 67  RGISK 71

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 72  WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
           WA E + ++ + +      EQ+K  YR+     HP    G+      + A+  F+++  A
Sbjct: 30  WAGE-TKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ---PYEQYAKMIFMELNDA 85

Query: 132 YELLIDE 138
           +    ++
Sbjct: 86  WSEFENQ 92

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.86
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.86
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.85
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.85
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.85
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.84
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.84
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.84
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.84
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.84
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.82
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.82
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.82
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.81
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.8
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.78
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.77
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.76
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.76
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.74
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.73
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.72
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.7
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.7
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.7
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.67
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.66
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.63
2guz_A	71	Mitochondrial import inner membrane translocase su	99.62
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.61
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.6
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.12
2guz_B	65	Mitochondrial import inner membrane translocase su	98.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	89.21

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.86  E-value=1.5e-22  Score=152.90  Aligned_cols=73  Identities=41%  Similarity=0.658  Sum_probs=66.7

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ..|||+||||+++++.++||+||++|+++||||+++..      +.++++|++|++||+||+||.+|+.||..+.....
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~   74 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD------KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT------CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence            37999999999999999999999999999999998753      46889999999999999999999999999876544

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=6.9e-22  Score=142.01  Aligned_cols=73  Identities=38%  Similarity=0.593  Sum_probs=66.8

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ....|||+||||+++++.++||+||++++++||||+++..      +.+.+.|++|++||+||+||.+|..||.++...
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD------PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC------TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            4568999999999999999999999999999999998753      468899999999999999999999999988643

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=9.2e-22  Score=142.34  Aligned_cols=74  Identities=38%  Similarity=0.547  Sum_probs=66.8

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ....+||+||||+++++.++||+||++++++||||+++..     .+.++++|++|++||+||+||.+|..||..+..+
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   79 (82)
T 2ej7_A            6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-----KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP   79 (82)
T ss_dssp             SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-----HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            4568999999999999999999999999999999998653     3568899999999999999999999999988643

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.85  E-value=1e-21  Score=140.60  Aligned_cols=69  Identities=43%  Similarity=0.619  Sum_probs=63.9

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .|||+||||+++++.++||+||++++++||||+++.       +.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus         3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-------~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   71 (77)
T 1hdj_A            3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-------PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG   71 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-------TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence            689999999999999999999999999999999865       357899999999999999999999999987543

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=1.2e-21  Score=140.61  Aligned_cols=72  Identities=38%  Similarity=0.548  Sum_probs=66.1

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ....|||+||||+++++.++||+||++++++||||+++.       +.+.+.|++|++||+||+||.+|..||..+...
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-------PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-------HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            456899999999999999999999999999999999865       457899999999999999999999999988644

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.85  E-value=5.6e-22  Score=146.91  Aligned_cols=78  Identities=28%  Similarity=0.458  Sum_probs=68.8

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRV  150 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~  150 (227)
                      ....|||+||||+++++.++||+||++|+++||||+++.....+..+.++++|++|++||+||+||.+|+.||..+..
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~   90 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG   90 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence            346899999999999999999999999999999999875433334467889999999999999999999999998753

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=1.1e-21  Score=150.29  Aligned_cols=83  Identities=30%  Similarity=0.352  Sum_probs=71.5

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      ....|||+||||+++++.++||+|||+|+++||||+++..      +.++++|++|++||+||+||.+|..||..+..+.
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~   90 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN------PKAVETFQKLQKAKEILTNEESRARYDHWRRSQM   90 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC------STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence            3468999999999999999999999999999999998753      4689999999999999999999999999876554


Q ss_pred             cchhHHHHH
Q 027187          153 MKASQAWME  161 (227)
Q Consensus       153 ~~~~~~~~~  161 (227)
                      ......|..
T Consensus        91 ~~~~~~w~~   99 (112)
T 2ctq_A           91 SMPFQQWEA   99 (112)
T ss_dssp             SSCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            444444544

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.84  E-value=3.2e-21  Score=136.67  Aligned_cols=67  Identities=36%  Similarity=0.643  Sum_probs=61.7

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ...+||+||||+++++.++||+||++++++||||++++.         .+.|++|++||+||+||.+|..||.+|.
T Consensus         6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---------~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---------AEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---------HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---------HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            468999999999999999999999999999999998652         5799999999999999999999999874

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=3.8e-21  Score=144.17  Aligned_cols=71  Identities=34%  Similarity=0.508  Sum_probs=65.4

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ....+||+||||+++++.++||+||++|+++||||+++..      +.+.++|++|++||+||+||.+|..||..+.
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   84 (99)
T 2yua_A           14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS------AEAAERFTRISQAYVVLGSATLRRKYDRGLL   84 (99)
T ss_dssp             SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC------SHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred             CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------HHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            3468999999999999999999999999999999998753      5688999999999999999999999999764

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=3.2e-21  Score=141.54  Aligned_cols=71  Identities=39%  Similarity=0.643  Sum_probs=65.3

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      ...|||+||||+++++.++||+||++++++||||+++.       +.+++.|++|++||++|+||.+|..||.++...
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-------PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-------TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999999875       357899999999999999999999999988643

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=3.3e-21  Score=141.48  Aligned_cols=70  Identities=43%  Similarity=0.629  Sum_probs=64.8

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ....+||+||||+++++.++||+||++|+++||||+++.       +.+.++|++|++||+||+||.+|..||..+.
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   73 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-------PDAEAKFREIAEAYETLSDANRRKEYDTLGH   73 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-------HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-------hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence            456899999999999999999999999999999999864       5688999999999999999999999999764

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.4e-21  Score=142.42  Aligned_cols=75  Identities=37%  Similarity=0.504  Sum_probs=67.3

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      ....|||+||||+++++.++||+||++|+++||||+++..     .+.++++|++|++||+||+||.+|..||..+....
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   80 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN-----KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW   80 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC-----SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc-----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            3568999999999999999999999999999999998763     35788999999999999999999999999876443

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.82  E-value=3e-21  Score=146.97  Aligned_cols=74  Identities=35%  Similarity=0.526  Sum_probs=66.6

Q ss_pred             CCCCCccccccCCCCC-CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           73 ADEKSPYETLELERDA-DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~a-s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ....|||+||||+++| +.++||+|||+++++||||++++   ....+.+++.|++|++||+||+||.+|+.||..+.
T Consensus        12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~---~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKN---KEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCS---HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            4468999999999999 99999999999999999999865   12346788999999999999999999999999875

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.82  E-value=4.2e-21  Score=144.14  Aligned_cols=72  Identities=42%  Similarity=0.585  Sum_probs=64.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      .|||+||||+++++.++||+||++++++||||+++..     .+.+++.|++|++||+||+||.+|..||..+..+.
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-----~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~   73 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDN-----KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL   73 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC-----CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc-----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            5899999999999999999999999999999998763     35688999999999999999999999999875443

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.82  E-value=1.2e-20  Score=143.91  Aligned_cols=70  Identities=36%  Similarity=0.553  Sum_probs=65.1

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ...+||+||||+++++.++||+||++|+++||||+++..      +.+.++|++|++||+||+||.+|+.||..+.
T Consensus        15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~------~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   84 (109)
T 2ctw_A           15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN------PEAADKFKEINNAHAILTDATKRNIYDKYGS   84 (109)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC------HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc------HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence            458999999999999999999999999999999998753      5688999999999999999999999999875

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.81  E-value=2e-20  Score=138.43  Aligned_cols=67  Identities=36%  Similarity=0.589  Sum_probs=61.8

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ...|||+||||+++++.++||+||++|+++||||+++..         .++|++|++||+||+||.+|+.||..+.
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---------~~~f~~i~~Ay~~L~d~~~R~~YD~~~~   72 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---------TEKFKEISEAFEILNDPQKREIYDQYGL   72 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---------HHHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---------HHHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence            458999999999999999999999999999999998653         4699999999999999999999999763

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.80  E-value=3.6e-20  Score=149.22  Aligned_cols=76  Identities=30%  Similarity=0.493  Sum_probs=67.6

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      ....|||+||||+++++.++||+|||+|++++|||+++..+..++.+.+.++|++|++||+||+||.+|+.||..+
T Consensus         7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~   82 (155)
T 2l6l_A            7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR   82 (155)
T ss_dssp             CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred             CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence            4568999999999999999999999999999999999876433445568899999999999999999999999864

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.78  E-value=1.4e-20  Score=168.69  Aligned_cols=100  Identities=32%  Similarity=0.472  Sum_probs=0.0

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCCc
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNPM  153 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~  153 (227)
                      ..+|||+||||+++|+.+|||+|||+|+++||||+++.       +.++++|++|++||+||+||.+|+.||+++.....
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-------~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   98 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-------NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRND   98 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-------hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccC
Confidence            45899999999999999999999999999999999865       35789999999999999999999999998543221


Q ss_pred             chhHHHHHHHHHhhhcc--chhhHHHHHHHHH
Q 027187          154 KASQAWMEWLIKKRKAF--DQRGDMAIAAWAE  183 (227)
Q Consensus       154 ~~~~~~~~~~~~~r~~f--~~~g~~~~~~~~~  183 (227)
                      .   +|...+.....+|  .+|+++|..+|++
T Consensus        99 ~---~~~~~~~~~~~~f~~~~f~diF~~~Fg~  127 (329)
T 3lz8_A           99 P---GFGRQRQTHEQSYSQQDFDDIFSSMFGQ  127 (329)
T ss_dssp             --------------------------------
T ss_pred             C---CcccccccccCCcCCCchhhhhHhhhcC
Confidence            1   1211000001122  2467888888875

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.77  E-value=1.1e-19  Score=151.21  Aligned_cols=71  Identities=32%  Similarity=0.537  Sum_probs=65.1

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      .|||+||||+++|+.++||+|||+++++||||+++..      +.+.++|++|++||++|+||.+|+.||.+|....
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~   72 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN------PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   72 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC------TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------hHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence            5899999999999999999999999999999998753      5688999999999999999999999999876443

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.76  E-value=3.4e-19  Score=150.16  Aligned_cols=73  Identities=19%  Similarity=0.420  Sum_probs=63.2

Q ss_pred             CCCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           74 DEKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      ...|||+||||+++  ++.++||++||+|+++||||++++.+ ..+...+.++|+.|++||+||+||.+|+.||..
T Consensus        41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~-~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~  115 (207)
T 3bvo_A           41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS-QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK  115 (207)
T ss_dssp             TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC-HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            46899999999986  78999999999999999999997642 122345778999999999999999999999954

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=3.3e-19  Score=131.41  Aligned_cols=62  Identities=24%  Similarity=0.421  Sum_probs=57.3

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHh
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQ  143 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~  143 (227)
                      ..|||+||||+++++.++||+|||+|+++||||+++.       +.+.++|++|++||++|+||.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-------~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-------PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-------TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-------ccHHHHHHHHHHHHHHHCCcccccC
Confidence            5899999999999999999999999999999999875       3478899999999999999998764

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.74  E-value=2.1e-19  Score=138.19  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=65.7

Q ss_pred             CCCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC-
Q 027187           75 EKSPYETLELERDADE--EQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN-  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~--~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~-  151 (227)
                      ..+||+||||+++++.  ++||+|||+|+++||||+++.          +++|++|++||+||+||.+|+.||.++..- 
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----------~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~   76 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----------EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----------TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----------HHHHHHHHHHHHHHCCHHHHHHhhhcccccc
Confidence            3689999999999999  999999999999999999754          368999999999999999999999765321 


Q ss_pred             ----CcchhHHHHHHH
Q 027187          152 ----PMKASQAWMEWL  163 (227)
Q Consensus       152 ----~~~~~~~~~~~~  163 (227)
                          +..+...|.+|+
T Consensus        77 ~~~~~~~g~p~w~~w~   92 (114)
T 1gh6_A           77 ATEIPTYGTDEWEQWW   92 (114)
T ss_dssp             CCCCCCCSSSCHHHHH
T ss_pred             cccCCCCCCchHHHHH
Confidence                122345677764

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.72  E-value=1.7e-18  Score=141.88  Aligned_cols=72  Identities=18%  Similarity=0.306  Sum_probs=63.2

Q ss_pred             CccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           77 SPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        77 d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      |||+||||++++  +..+||++||+++++||||++++.+ ..+...+.++|..|++||+||+||.+|+.||..+.
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~-~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGS-QAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSC-HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            799999999999  9999999999999999999998742 12234577899999999999999999999998654

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.70  E-value=1.7e-18  Score=127.32  Aligned_cols=67  Identities=22%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             CCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh
Q 027187           73 ADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY  144 (227)
Q Consensus        73 ~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y  144 (227)
                      ....++|+||||+++|+.++||+|||+|+++||||++++.     .+.++++|++|++||+||+|...|..+
T Consensus        13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~-----~~~a~~~F~~I~~AYevL~~~~~r~~~   79 (88)
T 1iur_A           13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN-----HDIANEVFKHLQNEINRLEKQAFLDQN   79 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC-----HHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred             ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-----hHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            3457999999999999999999999999999999998663     256889999999999999998777433

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.70  E-value=5.8e-18  Score=121.95  Aligned_cols=62  Identities=19%  Similarity=0.319  Sum_probs=56.2

Q ss_pred             CCCccccccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcc
Q 027187           75 EKSPYETLELERD--ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDM  146 (227)
Q Consensus        75 ~~d~Y~iLgv~~~--as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~  146 (227)
                      ..++|+||||+++  ++.++||+|||+|+++||||++++          .++|++|++||++|+|+.+|..++-
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----------~~~f~~i~~AYe~L~~~~~r~~~~~   73 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----------HALMQELNSLWGTFKTEVYNLRMNL   73 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----------HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----------HHHHHHHHHHHHHHhhHHHHHHHhc
Confidence            3689999999999  999999999999999999999743          4799999999999999999988543

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.70  E-value=1.4e-18  Score=142.42  Aligned_cols=65  Identities=25%  Similarity=0.245  Sum_probs=57.5

Q ss_pred             CCCccccccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDAD--EEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as--~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ..+||+||||+++|+  .++||+|||++++++|||++++          +++|++|++||+||+||.+|+.||++|.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----------~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----------EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----------CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----------HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            479999999999998  5999999999999999999755          2689999999999999999999999884

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.67  E-value=1.1e-17  Score=126.95  Aligned_cols=65  Identities=17%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-CccccchHHHHHHHHHHHHHHcCChh
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRG-TLEKGETAEAKFIKIQAAYELLIDEE  139 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~-~~~~~~~a~~~f~~I~~AY~vLsdp~  139 (227)
                      ...+||+|||++. |+.++||+|||+++++||||+++..+ +++....|+++|+.|++||+||+|+.
T Consensus        39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            3479999999996 99999999999999999999987543 22334468899999999999999985

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.66  E-value=2.2e-17  Score=136.27  Aligned_cols=66  Identities=20%  Similarity=0.390  Sum_probs=59.4

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY  144 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y  144 (227)
                      .++|+||||+++|+.++||+|||+++++||||++++..   ....++++|++|++||+||+||.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~---~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP---YEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCT---THHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcc---hHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            69999999999999999999999999999999997631   1124889999999999999999999987

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.63  E-value=7.7e-17  Score=119.25  Aligned_cols=59  Identities=19%  Similarity=0.332  Sum_probs=52.0

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID  137 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd  137 (227)
                      .++|++|||++.|+.++||+|||+++++||||++++..   ....++++|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~---~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQP---YEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTST---THHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch---hHhHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999997631   113588999999999999964

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.62  E-value=8.6e-17  Score=113.44  Aligned_cols=57  Identities=21%  Similarity=0.233  Sum_probs=50.9

Q ss_pred             CCCccccccCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHH
Q 027187           75 EKSPYETLELER-DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERR  141 (227)
Q Consensus        75 ~~d~Y~iLgv~~-~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R  141 (227)
                      ..++|+||||++ +++.++||+|||+|+++||||++.+          .+.|++|++||++|+|+..|
T Consensus        13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----------~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----------PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----------HHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----------HHHHHHHHHHHHHHhhhhhc
Confidence            368999999999 7999999999999999999999532          36999999999999998655

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.61  E-value=1.5e-16  Score=131.46  Aligned_cols=67  Identities=27%  Similarity=0.394  Sum_probs=59.5

Q ss_pred             CCCCCccccc------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhc
Q 027187           73 ADEKSPYETL------ELER-DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYD  145 (227)
Q Consensus        73 ~~~~d~Y~iL------gv~~-~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD  145 (227)
                      ....|||+||      |+++ +++.++||++||+|+++||||++++         +.++|+.|++||+||+||.+|+.||
T Consensus         8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---------a~~~f~~i~~AY~vL~dp~~R~~Yd   78 (181)
T 3uo3_A            8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---------GSEQSSTLNQAYHTLKDPLRRSQYM   78 (181)
T ss_dssp             CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---------CSSGGGSHHHHHHHHHSHHHHHHHH
T ss_pred             CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---------HHHHHHHHHHHHHHHcChHHHHHHH
Confidence            3458999999      5665 8999999999999999999999864         3468999999999999999999999


Q ss_pred             ccC
Q 027187          146 MDN  148 (227)
Q Consensus       146 ~~~  148 (227)
                      ..+
T Consensus        79 ~~l   81 (181)
T 3uo3_A           79 LKL   81 (181)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            854

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.60  E-value=5.4e-17  Score=158.49  Aligned_cols=75  Identities=31%  Similarity=0.502  Sum_probs=40.8

Q ss_pred             CCCCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           72 WADEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        72 ~~~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .....|||+||||+++|+.++||+|||+|+++||||++++.      +.++++|++|++||++|+||.+|+.||++|..+
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~------~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~   90 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN------PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG   90 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC------hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence            34568999999999999999999999999999999998653      457889999999999999999999999998654


Q ss_pred             C
Q 027187          152 P  152 (227)
Q Consensus       152 ~  152 (227)
                      .
T Consensus        91 ~   91 (780)
T 3apo_A           91 L   91 (780)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.12  E-value=3.2e-11  Score=106.84  Aligned_cols=70  Identities=40%  Similarity=0.658  Sum_probs=57.3

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhccc
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMD  147 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~  147 (227)
                      ..++|.+||+...++.++|+++|+++++++|||+.+.+   ++++.++++|+.|.+||++|+||++|..||.+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~---~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g  450 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNE---EEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG  450 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSH---HHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence            45899999999999999999999999999999998652   12356889999999999999999999999974

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.85  E-value=2.7e-09  Score=73.70  Aligned_cols=52  Identities=15%  Similarity=0.072  Sum_probs=45.7

Q ss_pred             CCccccccCCCC---CCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCC
Q 027187           76 KSPYETLELERD---ADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLID  137 (227)
Q Consensus        76 ~d~Y~iLgv~~~---as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsd  137 (227)
                      ...|.||||+++   ++.++|+++||+|...+|||+...          ......|++|+++|..
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----------~yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----------FYLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----------HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHHHH
Confidence            457899999999   999999999999999999999644          3678889999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=89.21  E-value=0.19  Score=47.88  Aligned_cols=47  Identities=13%  Similarity=0.222  Sum_probs=37.0

Q ss_pred             CCCCccccccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHH
Q 027187           74 DEKSPYETLELERDADE--EQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL  134 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~--~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~v  134 (227)
                      ..++||.+||++-+...  .+|+++||++++..+++              .+++..|..|+.|
T Consensus       627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------------RHRYTLVDMANKV  675 (681)
T ss_dssp             CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------------HHHHHHHHHHHHH
T ss_pred             cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------------HHHHHHHHHhccc
Confidence            34569999999776655  67999999999966554              3688888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	227
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-17
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	5e-13
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	3e-12
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	6e-12
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	9e-11
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-10
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	3e-10
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-07

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.0 bits (176), Expect = 3e-17
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 75  EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYEL 134
           +K  Y  L  +  A+   +K  Y++L   YHPD           E    KFI+I  A+++
Sbjct: 15  KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKI 74

Query: 135 LIDEERRRQYDM 146
           L +EE +++YD+
Sbjct: 75  LGNEETKKKYDL 86

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.7 bits (147), Expect = 5e-13
 Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 55  ESWFRVNQR--RTVVSAANWA--DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYD 110
             W    +R  R ++S  +      ++ ++ + +      EQ+K  YR+     HPD   
Sbjct: 8   LEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKAT 67

Query: 111 GRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY 144
           G+      + A+  F+++  A+    ++ ++  Y
Sbjct: 68  GQ---PYEQYAKMIFMELNDAWSEFENQGQKPLY 98

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (140), Expect = 3e-12
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 6/71 (8%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           +  YE L + + A+E +I+ AY+RLA  YHPD   G       + AEAKF +I+ AYE+L
Sbjct: 3   QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG------DKEAEAKFKEIKEAYEVL 56

Query: 136 IDEERRRQYDM 146
            D ++R  YD 
Sbjct: 57  TDSQKRAAYDQ 67

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 57.3 bits (138), Expect = 6e-12
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 79  YETLELER--DADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLI 136
           +    L      D + + + ++ L + YHPD +      E+   A  +   I  A++ L 
Sbjct: 4   FTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ-LAAVQQSATINQAWQTLR 62

Query: 137 DEERRRQYDMD 147
               R +Y + 
Sbjct: 63  HPLMRAEYLLS 73

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 9e-11
 Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K  Y+TL L R A +E+IK AYRR A  YHPD             AE KF +I  AY++L
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-------EPGAEEKFKEIAEAYDVL 55

Query: 136 IDEERRRQYDM 146
            D  +R  +D 
Sbjct: 56  SDPRKREIFDR 66

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 54.2 bits (130), Expect = 1e-10
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 71  NWADEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKI 128
           + AD++   E L+L R    D  +++ AY++ +   HPD             + A   ++
Sbjct: 6   SRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG----------SHALMQEL 55

Query: 129 QAAYELLIDEERRRQYDM 146
            + +     E    + ++
Sbjct: 56  NSLWGTFKTEVYNLRMNL 73

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 3e-10
 Identities = 14/77 (18%), Positives = 20/77 (25%), Gaps = 5/77 (6%)

Query: 76  KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELL 135
           K     +E      E + K   RRL   +HPD       +         F  +Q     L
Sbjct: 16  KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIA-----NEVFKHLQNEINRL 70

Query: 136 IDEERRRQYDMDNRVNP 152
             +    Q         
Sbjct: 71  EKQAFLDQNADRASRRT 87

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 46.3 bits (109), Expect = 1e-07
 Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 17/96 (17%)

Query: 74  DEKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAA 131
           +     + L LER A  +   ++ AY +  K +HPD                K  K+   
Sbjct: 6   ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE----------KMKKMNTL 55

Query: 132 YELLIDEERRRQYDM-----DNRVNPMKASQAWMEW 162
           Y+ + D  +           D    P   +  W +W
Sbjct: 56  YKKMEDGVKYAHQPDFGGFWDATEIPTYGTDEWEQW 91

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.9
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.86
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.82
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.76
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.74
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.68
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.68

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=4.8e-24  Score=150.83  Aligned_cols=71  Identities=42%  Similarity=0.703  Sum_probs=65.6

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      .+|||+||||+++||.++||+||++++++||||+++++      +.+++.|+.|++||+||+||.+|..||++|...
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~------~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~   72 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD------KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA   72 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTT------CHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSS
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCC------hHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccc
Confidence            47999999999999999999999999999999998763      567889999999999999999999999998643

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-22  Score=144.29  Aligned_cols=69  Identities=43%  Similarity=0.619  Sum_probs=64.1

Q ss_pred             CCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCC
Q 027187           76 KSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVN  151 (227)
Q Consensus        76 ~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~  151 (227)
                      +|||+||||+++|+.++|++||+++++++|||++..       +.+.+.|+.|++||+||+||.+|+.||++|..+
T Consensus         3 kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-------~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~   71 (77)
T d1hdja_           3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-------PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG   71 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-------TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred             CChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccc-------hhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhh
Confidence            699999999999999999999999999999999865       457889999999999999999999999987644

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.1e-22  Score=149.65  Aligned_cols=76  Identities=29%  Similarity=0.482  Sum_probs=68.4

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ..+|||+||||+++|+.++||+||++|+++||||+++........+.+++.|+.|++||+||+||.+|+.||....
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            3589999999999999999999999999999999988765444557788999999999999999999999998654

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.82  E-value=7.1e-22  Score=150.05  Aligned_cols=68  Identities=22%  Similarity=0.235  Sum_probs=60.9

Q ss_pred             CCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCCCCC
Q 027187           75 EKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNRVNP  152 (227)
Q Consensus        75 ~~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~  152 (227)
                      ..+||+||||+++|  +.++||+|||+||++||||++++.          ++|++|++||+||+||.+|+.||..+....
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~----------e~F~~I~~AY~vLsd~~kR~~YD~~~~~~~   76 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----------EKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT----------TTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH----------HHHHHHHHHHHHhCCHHHHHHHhccCCCCc
Confidence            47899999999999  788999999999999999998652          579999999999999999999998765443

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.3e-19  Score=127.83  Aligned_cols=72  Identities=18%  Similarity=0.296  Sum_probs=61.8

Q ss_pred             CCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccC
Q 027187           76 KSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDN  148 (227)
Q Consensus        76 ~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~  148 (227)
                      .|||+||||++++  +.++||+||+++++++|||+..+.+ ..+...+.+.|..|++||+||+||.+|+.|+-.+
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~-~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~l   74 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGS-QAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSC-HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccch-HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            3799999999864  5899999999999999999987653 2334567889999999999999999999998654

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.74  E-value=2.9e-19  Score=127.09  Aligned_cols=65  Identities=18%  Similarity=0.297  Sum_probs=59.7

Q ss_pred             CCCccccccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDA--DEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~a--s~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      ..+||+||||++++  +.++||+||++++++||||++.+          .++|++|++||++|+|+.+|..||.++.
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----------~e~~~~in~Ay~~L~d~~~r~~~~~~~~   76 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----------HALMQELNSLWGTFKTEVYNLRMNLGGT   76 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----------HHHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----------HHHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence            47899999999988  99999999999999999999744          4689999999999999999999998764

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.68  E-value=4.1e-18  Score=125.82  Aligned_cols=68  Identities=19%  Similarity=0.373  Sum_probs=60.6

Q ss_pred             CCCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhh
Q 027187           74 DEKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQY  144 (227)
Q Consensus        74 ~~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~Y  144 (227)
                      ...++|++|||...++.++||+||++++++||||++++.+   ....+++.|+.|++||++|+||.+|+.|
T Consensus        31 ~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~---~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          31 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP---YEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTST---THHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChH---HHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            3467899999999999999999999999999999987642   2345888999999999999999999988

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.6e-18  Score=123.16  Aligned_cols=67  Identities=22%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             CCCccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCccccchHHHHHHHHHHHHHHcCChhHHHhhcccCC
Q 027187           75 EKSPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEKGETAEAKFIKIQAAYELLIDEERRRQYDMDNR  149 (227)
Q Consensus        75 ~~d~Y~iLgv~~~as~~eIK~aYr~la~~~HPDk~~~~~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~  149 (227)
                      .+++|+||||+.+||.+|||+||++|+++||||+++++     .+.++++|+.|++||++|+   ++..||.+..
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~-----~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~   81 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN-----HDIANEVFKHLQNEINRLE---KQAFLDQNAD   81 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC-----HHHHHHHHHHHHHHHHHHH---HHTTCSSSSS
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccch-----hhHHHHHHHHHHHHHHHHH---HHHHhhccch
Confidence            47999999999999999999999999999999998763     4678999999999999996   5677887654