Citrus Sinensis ID: 027372

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
MSTTTLYNCATTKLCSSLINNSSSFSKSRLFFSSSHFAPRVSSIRRPLSLRGASRSSSSSSSARAISTMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI
ccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccEEEEcccccCEEECcccccccccccccccccEEEEEEEEEEccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccCEEEEEEEEccccccCEEEEEEECc
*************LCSSLIN***********************************************************AVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI
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MSTTTLYNCATTKLCSSLINNSSSFSKSRLFFSSSHFAPRVSSIRRPLSLRGASRSSSSSSSARAISTMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHERNVFI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isopentenyl-diphosphate Delta-isomerase I, chloroplastic Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).probableQ38929
Isopentenyl-diphosphate Delta-isomerase II Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).probableQ39471
Isopentenyl-diphosphate Delta-isomerase I Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).probableQ39472

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.3.-.-Intramolecular oxidoreductases.probable
5.3.3.-Transposing C==C bonds.probable
5.3.3.2Isopentenyl-diphosphate Delta-isomerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PNY, chain A
Confidence level:very confident
Coverage over the Query: 68-224
View the alignment between query and template
View the model in PyMOL