Citrus Sinensis ID: 027615

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRPS
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccEEEEHHHHHHHHHHHHEEcccccccHHHHHHHHHHHHHHHHEEEEEcccccccccccHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccEccccccHccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mccwfnhncstcssrtcdriccgslgscngasfssvcsfgsscsfctrrsilpeygqtHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEgmnqliypqtWIFTMIVLVCVITQMNYLNKALDtfntavvsPIYYVMFTSLTILASVIMfkdwdrqnptQIVTEICGFVTILSGtfllhktkdavdgssaSIQMRMskhsdenaydpegmplrrqdnmrps
Flexible Loop (DISEMBL)
mccwfnhncstcssrTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMskhsdenaydpegmplrrqdnmrps
Low Complexity Region (SEG)
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGAsfssvcsfgsscsfcTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRPS
Disordered region (IsUnstruct)
*CCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKT****************************************
Disordered Region (DISOPRED)
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLH******************************************
Disordered Region (DISEMBL)
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLR********
Disordered Region (DISPRO)
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQ****************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCCWFNHNCSTCSSRTCDRICCGSLGSCNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q5R7Q3	360	Magnesium transporter NIP	yes	no	0.683	0.419	0.467	3e-33
Q8N8Q9	360	Magnesium transporter NIP	no	no	0.683	0.419	0.467	3e-33
Q3SWX0	360	Magnesium transporter NIP	yes	no	0.683	0.419	0.467	3e-33
Q9JJC8	359	Magnesium transporter NIP	no	no	0.683	0.420	0.461	5e-32
Q8BZF2	406	Magnesium transporter NIP	no	no	0.601	0.327	0.428	9e-31
Q8BMW7	416	Magnesium transporter NIP	no	no	0.701	0.372	0.421	3e-30
Q0D2K0	466	Magnesium transporter NIP	no	no	0.638	0.302	0.443	7e-29
Q6NVV3	410	Magnesium transporter NIP	no	no	0.701	0.378	0.421	6e-28
Q5RDB8	410	Magnesium transporter NIP	no	no	0.701	0.378	0.421	8e-28
Q7RTP0	329	Magnesium transporter NIP	no	no	0.601	0.404	0.362	3e-17

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score =  141 bits (356), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 3/154 (1%)

Query: 53  PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
           P +GQT+++VYI +CS++G+ SV  VK LGIA+K  F G   L +P  WI  + ++VCV 
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVS 230

Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
           TQ+NYLN+ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290

Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
            G FLLH  KD V  S AS+ +   K  DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321

Acts as a selective Mg(2+) transporter.
Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score =  141 bits (356), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 3/154 (1%)

Query: 53  PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
           P +GQT+++VYI +CS++G+ SV  VK LGIA+K  F G   L +P  WI  + ++VCV 
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVS 230

Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
           TQ+NYLN+ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290

Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
            G FLLH  KD V  S AS+ +   K  DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score =  141 bits (355), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 3/154 (1%)

Query: 53  PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
           P +GQT+++VYI +CS++G++SV   K LGIA+K  F G   L +P TWI  + ++VCV 
Sbjct: 171 PRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVS 230

Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
           TQ+NYLN+ALD FNT++V+PIYYV FT+  I  S I+FK+W       ++  + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTII 290

Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
            G FLLH  KD V  S +S+ +   K  DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLSSLPVSFRK--DEKAVN 321

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score =  137 bits (346), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 99/154 (64%), Gaps = 3/154 (1%)

Query: 53  PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
           P +GQT+++VYI +CS++G+ SV  VK LGIA+K    G   L +P  WI    ++VCV 
Sbjct: 171 PRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVS 230

Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
           TQ+NYLN+ALD FNT++V+PIYYV FT+  +  S I+FK+W       ++  + GF TI+
Sbjct: 231 TQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTII 290

Query: 173 SGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD 206
            G FLLH  KD V  S AS+ +   K  DE A +
Sbjct: 291 VGIFLLHAFKD-VSFSLASLPVSFRK--DEKAMN 321

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score =  133 bits (335), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 96/133 (72%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
           + P YGQ ++++YI +CS++GS SV +VK LG+ ++  F+G+  + +P  +I ++I+ + 
Sbjct: 217 VAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLS 276

Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
           +I Q+N+LN+ALD FNT++V PIYYV FT++ + +S+++FK+W   +   IV  + GFVT
Sbjct: 277 IIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVT 336

Query: 171 ILSGTFLLHKTKD 183
           I+ G F+LH  KD
Sbjct: 337 IILGVFMLHAFKD 349

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
           + P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K   E       P  +I   ++ + 
Sbjct: 227 VAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALS 286

Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
           V TQ+NYLNKALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFT 346

Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
           I++G FLLH  K+      +  S + +  +S + ++N+Y
Sbjct: 347 IINGIFLLHAFKNTNITWSELMSTAKKEALSPNGNQNSY 385

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score =  127 bits (318), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 101/142 (71%), Gaps = 1/142 (0%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
           I P YGQ ++++YI +CS++G+ SV +VK LGI +K  F+G+  + +P  +I ++I+ + 
Sbjct: 277 IAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALS 336

Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
           + TQ+N+LN+ALD FNT++V PIYYV FT++ + +S+I+FK+W   +   I   + GFVT
Sbjct: 337 LSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVT 396

Query: 171 ILSGTFLLHKTKDAVDGSSASI 192
           I+ G F+LH  KD +D S AS+
Sbjct: 397 IILGVFMLHAFKD-LDISCASL 417

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1

 Score =  124 bits (310), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 103/159 (64%), Gaps = 4/159 (2%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
           + P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K   E      +P  ++   ++++ 
Sbjct: 227 VAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLS 286

Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
           V TQ+NYLNKALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFT 346

Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
           I+ G FLLH  K+      + +S + +  +S + +EN Y
Sbjct: 347 IIIGIFLLHAFKNTDITWSELTSTAKKEAVSLNVNENNY 385

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1

 Score =  123 bits (309), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
           + P+ GQT+++VYI +CSL+G+ SV SVK LGIA+K   E      +P  ++   ++++ 
Sbjct: 227 VAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLS 286

Query: 111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
           V TQ+NYLNKALDTFNT++V+PIYYV FTS+ +  S I+F++W       I+  + GF T
Sbjct: 287 VTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFT 346

Query: 171 ILSGTFLLHKTKDA----VDGSSASIQMRMSKHSDENAY 205
           I+ G FLLH  K+      + +S + +  +S +  EN Y
Sbjct: 347 IIIGIFLLHAFKNTDITWSELTSTAKKEAVSLNVSENNY 385

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+) and Co(2+) but to a much less extent than Mg(2+).

Pongo abelii (taxid: 9601)

>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 2/135 (1%)

Query: 51  ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALK--LTFEGMNQLIYPQTWIFTMIVL 108
           I P +G T++MVYI +CSL+GS +V S K +G+A +  L     +Q       +   ++ 
Sbjct: 179 IAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLG 238

Query: 109 VCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGF 168
             +I Q  Y+NKAL+ F+++V   IYYV+FT+L +LAS I+F++W        +   CGF
Sbjct: 239 CSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGF 298

Query: 169 VTILSGTFLLHKTKD 183
            T+  G  L+   K+
Sbjct: 299 TTVSVGIVLIQVFKE 313

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
255571788	340	Non-imprinted in Prader-Willi/Angelman s	0.850	0.552	0.739	8e-80
359486259	347	PREDICTED: magnesium transporter NIPA2 [	0.760	0.484	0.821	5e-79
147855843	351	hypothetical protein VITISV_002232 [Viti	0.760	0.478	0.821	6e-79
297739546	333	unnamed protein product [Vitis vinifera]	0.760	0.504	0.821	6e-79
326505536	381	predicted protein [Hordeum vulgare subsp	0.809	0.469	0.748	4e-77
255576223	345	Non-imprinted in Prader-Willi/Angelman s	0.755	0.484	0.791	2e-76
356560745	347	PREDICTED: magnesium transporter NIPA2-l	0.805	0.512	0.743	6e-76
357445353	341	Magnesium transporter NIPA2 [Medicago tr	0.787	0.510	0.754	8e-76
357133610	360	PREDICTED: magnesium transporter NIPA2-l	0.764	0.469	0.775	1e-75
115441455	360	Os01g0882300 [Oryza sativa Japonica Grou	0.805	0.494	0.754	1e-75

>gi|255571788|ref|XP_002526837.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223533841|gb|EEF35572.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 139/188 (73%), Positives = 162/188 (86%)

Query: 32  SFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEG 91
           +F    +F     F     ++P+YGQ+HV+VYI VCSLVGSLSVMSVKAL IALKLTF G
Sbjct: 151 AFLLYAAFVIGAVFIIIIRVIPQYGQSHVLVYIAVCSLVGSLSVMSVKALSIALKLTFSG 210

Query: 92  MNQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFK 151
           MNQL+YPQTW+FT++V+ CVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFK
Sbjct: 211 MNQLVYPQTWVFTLVVITCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFK 270

Query: 152 DWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMP 211
           DWDRQNPTQIVTE+CGFVTILSGTFLLHKTKD V+GSS S+ + + KHS+E+ + PEG+P
Sbjct: 271 DWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVEGSSPSLPLSIPKHSEEDGFQPEGIP 330

Query: 212 LRRQDNMR 219
           LRRQ ++R
Sbjct: 331 LRRQASLR 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486259|ref|XP_002264759.2| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera]

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 154/168 (91%)

Query: 52  LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
           +P+YGQTH+MVYIGVCSLVGSLSVMSVKALGIALKLT  GMNQL YPQTW FT++V+ CV
Sbjct: 178 IPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCV 237

Query: 112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
           ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE+CGFVTI
Sbjct: 238 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTI 297

Query: 172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMR 219
           LSGTFLLHKTKD  DG S S+ MR+SKH +E+ +  EG+PLRRQ+++R
Sbjct: 298 LSGTFLLHKTKDLSDGLSTSLSMRLSKHIEEDGFGQEGIPLRRQESLR 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855843|emb|CAN81783.1| hypothetical protein VITISV_002232 [Vitis vinifera]

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 154/168 (91%)

Query: 52  LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
           +P+YGQTH+MVYIGVCSLVGSLSVMSVKALGIALKLT  GMNQL YPQTW FT++V+ CV
Sbjct: 182 IPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCV 241

Query: 112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
           ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE+CGFVTI
Sbjct: 242 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTI 301

Query: 172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMR 219
           LSGTFLLHKTKD  DG S S+ MR+SKH +E+ +  EG+PLRRQ+++R
Sbjct: 302 LSGTFLLHKTKDLSDGLSTSLSMRLSKHIEEDGFGQEGIPLRRQESLR 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739546|emb|CBI29728.3| unnamed protein product [Vitis vinifera]

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 138/168 (82%), Positives = 154/168 (91%)

Query: 52  LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
           +P+YGQTH+MVYIGVCSLVGSLSVMSVKALGIALKLT  GMNQL YPQTW FT++V+ CV
Sbjct: 164 IPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLTYPQTWAFTIVVITCV 223

Query: 112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
           ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTE+CGFVTI
Sbjct: 224 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTI 283

Query: 172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMR 219
           LSGTFLLHKTKD  DG S S+ MR+SKH +E+ +  EG+PLRRQ+++R
Sbjct: 284 LSGTFLLHKTKDLSDGLSTSLSMRLSKHIEEDGFGQEGIPLRRQESLR 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326505536|dbj|BAJ95439.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 134/179 (74%), Positives = 154/179 (86%)

Query: 42  SCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTW 101
           + +F      +P+YGQTH+MVYIG+CSL GSLSVMSVKALGIALKLTF GMNQL+YPQTW
Sbjct: 169 AAAFVLIFHFVPKYGQTHIMVYIGICSLFGSLSVMSVKALGIALKLTFSGMNQLVYPQTW 228

Query: 102 IFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQI 161
            FT++V+ C++TQMNYLNKALDTFNTAVVSPIYY MFTSLTILASVIMFKDWDRQNPTQI
Sbjct: 229 FFTLVVIACIVTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQI 288

Query: 162 VTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRP 220
           VTE+CGFVTILSGTFLLHKTKD VDG   S+ +R+ KH DE+AY+ EG+PLR   +  P
Sbjct: 289 VTEMCGFVTILSGTFLLHKTKDMVDGLQQSLPIRIPKHVDEDAYESEGIPLRSAADGIP 347

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576223|ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis] gi|223531545|gb|EEF33375.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 133/168 (79%), Positives = 156/168 (92%), Gaps = 1/168 (0%)

Query: 52  LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
           +P+YGQTH+MVYIGVCSLVGSLSVMSVKALGIALKLT  GMNQLIYPQTW F ++V+ CV
Sbjct: 176 IPDYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLIYPQTWAFALVVITCV 235

Query: 112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
           +TQMNYLNKALDTFNTAVVSPIYYVMFTSLTI+ASVIMFKDWDRQ+PTQIVTE+CGFVTI
Sbjct: 236 VTQMNYLNKALDTFNTAVVSPIYYVMFTSLTIVASVIMFKDWDRQSPTQIVTEMCGFVTI 295

Query: 172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMR 219
           LSGTFLLHKTKD VDG + S+ +R+ KH++E+++  EG+PLRRQ+++R
Sbjct: 296 LSGTFLLHKTKDMVDGPT-SLPVRLPKHTEEDSFGAEGIPLRRQESLR 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560745|ref|XP_003548648.1| PREDICTED: magnesium transporter NIPA2-like [Glycine max]

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 133/179 (74%), Positives = 156/179 (87%), Gaps = 1/179 (0%)

Query: 42  SCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTW 101
           + +F      +P YGQTH+MVYIGVCSLVGSL+VMSVKALGI +KLT  GMNQLIYPQTW
Sbjct: 167 TATFILIFHFIPLYGQTHIMVYIGVCSLVGSLTVMSVKALGIVIKLTLSGMNQLIYPQTW 226

Query: 102 IFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQI 161
            FT++VLVCV+TQMNYLNKALDTFNTAVVSPIYYVMFT+ TI+ASVIMFKDWDRQ+PTQ+
Sbjct: 227 AFTLVVLVCVLTQMNYLNKALDTFNTAVVSPIYYVMFTTFTIVASVIMFKDWDRQSPTQV 286

Query: 162 VTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYD-PEGMPLRRQDNMR 219
           +TEICGFVTILSGTFLLHKTKD  DG   S+ +R+ KHS+E+ +D  EG+PLRRQ++MR
Sbjct: 287 ITEICGFVTILSGTFLLHKTKDMADGLQTSLSIRLPKHSEEDGFDGGEGIPLRRQESMR 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445353|ref|XP_003592954.1| Magnesium transporter NIPA2 [Medicago truncatula] gi|355482002|gb|AES63205.1| Magnesium transporter NIPA2 [Medicago truncatula]

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 135/179 (75%), Positives = 158/179 (88%), Gaps = 5/179 (2%)

Query: 42  SCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTW 101
           + +F      +P YGQTH+MVYIGVCSLVGSLSVMSVKALGIA+KLT  GMNQLIYPQTW
Sbjct: 166 TATFILVFHFIPLYGQTHIMVYIGVCSLVGSLSVMSVKALGIAIKLTLSGMNQLIYPQTW 225

Query: 102 IFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQI 161
           +F ++V VCV+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTI+ASVIMFKDWDRQ+PTQ+
Sbjct: 226 VFALVVTVCVLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTIVASVIMFKDWDRQSPTQV 285

Query: 162 VTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDP-EGMPLRRQDNMR 219
           +TEICGFVTILSGTFLLHKTKD  DGSS    +R++KHS+E+ +D  EG+PLRRQ++MR
Sbjct: 286 ITEICGFVTILSGTFLLHKTKDMADGSS----IRLNKHSEEDGFDDVEGIPLRRQESMR 340

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357133610|ref|XP_003568417.1| PREDICTED: magnesium transporter NIPA2-like [Brachypodium distachyon]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 151/169 (89%)

Query: 52  LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
           +P+YGQTH+MVYIGVCSL GSLSVMSVKALGIALKLTF GMNQL+YPQTW+FT++V+ C+
Sbjct: 179 VPQYGQTHIMVYIGVCSLFGSLSVMSVKALGIALKLTFSGMNQLVYPQTWVFTLVVIACI 238

Query: 112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
           +TQMNYLNKALDTFNTAVVSPIYY MFTSLTILASVIMFKDWDRQNPTQIVTE+CGFVTI
Sbjct: 239 LTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTI 298

Query: 172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRP 220
           LSGTFLLHKTKD VDG    + +R+ KH++E++Y  EG+PLR   +  P
Sbjct: 299 LSGTFLLHKTKDMVDGLQPHLPIRIPKHAEEDSYGAEGIPLRSAADGIP 347

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115441455|ref|NP_001045007.1| Os01g0882300 [Oryza sativa Japonica Group] gi|56784477|dbj|BAD82570.1| putative NTS2 protein [Oryza sativa Japonica Group] gi|113534538|dbj|BAF06921.1| Os01g0882300 [Oryza sativa Japonica Group] gi|218189480|gb|EEC71907.1| hypothetical protein OsI_04679 [Oryza sativa Indica Group]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 135/179 (75%), Positives = 153/179 (85%), Gaps = 1/179 (0%)

Query: 42  SCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTW 101
           + +F      +P+YGQTH+MVYIGVCSLVGSLSVMSVKALGIALKLTF GMNQLIYPQTW
Sbjct: 175 AATFVLIFRFIPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTW 234

Query: 102 IFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQI 161
           +FT++V+ C++TQMNYLNKALDTFNTAVVSPIYY MFTSLTILASVIMFKDWDRQNPTQI
Sbjct: 235 MFTIVVVACILTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQI 294

Query: 162 VTEICGFVTILSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMRP 220
           VTE+CGFVTILSGTFLLHKTKD VDG   ++ +R+ KH DE+ Y  EG+PLR      P
Sbjct: 295 VTEMCGFVTILSGTFLLHKTKDMVDGLPPTLPIRIPKH-DEDGYAAEGIPLRSAAEGLP 352

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2016084	343	AT1G71900 "AT1G71900" [Arabido	0.742	0.478	0.797	1.8e-69
TAIR|locus:2009343	368	AT1G34470 "AT1G34470" [Arabido	0.746	0.448	0.805	8e-69
TAIR|locus:2136912	386	AT4G09640 "AT4G09640" [Arabido	0.760	0.435	0.727	4.2e-63
TAIR|locus:2119540	336	AT4G13800 [Arabidopsis thalian	0.746	0.491	0.608	2.2e-50
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.619	0.408	0.690	1.5e-49
TAIR|locus:2141742	326	AT4G38730 "AT4G38730" [Arabido	0.705	0.478	0.590	8.5e-49
TAIR|locus:2047112	328	AT2G21120 [Arabidopsis thalian	0.647	0.435	0.580	1.8e-46
CGD|CAL0004327	368	orf19.5352 [Candida albicans (	0.583	0.350	0.503	2.8e-34
UNIPROTKB|Q5A5P7	368	CaO19.12812 "Putative uncharac	0.583	0.350	0.503	2.8e-34
UNIPROTKB|F1NMK8	352	NIPAL4 "Uncharacterized protei	0.601	0.377	0.481	5.8e-34

TAIR|locus:2016084 AT1G71900 "AT1G71900" [Arabidopsis thaliana (taxid:3702)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 134/168 (79%), Positives = 153/168 (91%)

Query:    52 LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
             +P+YGQT+VMVYIG+CSLVGSLSVMSVKALGIALKLTF G NQL YPQTWIFT++VL CV
Sbjct:   178 VPQYGQTNVMVYIGICSLVGSLSVMSVKALGIALKLTFSGTNQLFYPQTWIFTLVVLTCV 237

Query:   112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
             +TQ+NYLNKALDTFNTA+VSPIYYVMFTSLTILASVIMFKDWDRQN TQIVTEICGFVTI
Sbjct:   238 VTQLNYLNKALDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQNGTQIVTEICGFVTI 297

Query:   172 LSGTFLLHKTKDAVDGSSASIQMRMSKHSDENAYDPEGMPLRRQDNMR 219
             LSGTFLLH+TKD V+GSS  + +R+SKH +E     EG+PLRRQ+++R
Sbjct:   298 LSGTFLLHRTKDMVEGSSVILPLRISKHINEE----EGIPLRRQESLR 341

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2009343 AT1G34470 "AT1G34470" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 137/170 (80%), Positives = 153/170 (90%)

Query:    52 LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
             +P+YGQ+HVMVYIGVCSLVGSLSVMSVKALGIALKLTF GMNQLIYPQTW+FT+IVL CV
Sbjct:   178 VPQYGQSHVMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFTLIVLTCV 237

Query:   112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
             ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQ+ TQIVTE+CGFVTI
Sbjct:   238 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTELCGFVTI 297

Query:   172 LSGTFLLHKTKDAVDGSSA--SIQMRMSKH-SDENAYDPEGMPL--RRQD 216
             LSGTFLLHKTKD VDGSS+  ++ +R+ K   D N ++ EG+PL  RR +
Sbjct:   298 LSGTFLLHKTKDMVDGSSSLGNLALRLPKQLEDSNGFEQEGIPLTLRRHE 347

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2136912 AT4G09640 "AT4G09640" [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 131/180 (72%), Positives = 149/180 (82%)

Query:    52 LPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCV 111
             +P YGQ+HVMVYIGVCSL+GSLSVMSVKALGIALKLTF G NQL YPQTW+FT+IVL CV
Sbjct:   178 IPLYGQSHVMVYIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWVFTVIVLFCV 237

Query:   112 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTI 171
             ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQ+ TQI+TE+CGFVTI
Sbjct:   238 ITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIMTELCGFVTI 297

Query:   172 LSGTFLLHKTKDAVDGSS---------ASIQMRMSKHS-DENAYDPEG--MPLRRQDNMR 219
             LSGTFLLH T D VDG S         + + +R+ KHS D N +  +G  + LRRQ++ +
Sbjct:   298 LSGTFLLHTTTDMVDGESKGNLSSEEDSHLLLRIPKHSEDSNGFVQDGIILSLRRQESAK 357

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119540 AT4G13800 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 104/171 (60%), Positives = 130/171 (76%)

Query:    53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
             P YG+TH++VY+G+CSL+GSL+VMSVKA+ IA+KLTF GMNQ  Y   WIF ++V +C I
Sbjct:   168 PRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFIIVVTICCI 227

Query:   113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
              Q+NYLNKALD FNTAV+SP+YYVMFT+ TILAS+IMFKDW  Q+  QI TE+CGFVTIL
Sbjct:   228 LQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATELCGFVTIL 287

Query:   173 SGTFLLHKTKDAVDGSSASIQMRMSKHS--DENAYDPEGMPLRRQDNMRPS 221
             SGTFLLHKTKD   G+S S++   S HS  D   +   G   R  ++ RP+
Sbjct:   288 SGTFLLHKTKDM--GNSTSLRGSTS-HSPRDTPVFINSGSS-RSSNSTRPA 334

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 96/139 (69%), Positives = 117/139 (84%)

Query:    53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
             P YG+TH++VY+G+CSL+GSL+VMSVKA+ IA+KLTF G NQ  Y  TWIF ++V  C I
Sbjct:   168 PRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVVATCCI 227

Query:   113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
              Q+NYLNKALDTFNTAV+SP+YYVMFT+ TI+AS+IMFKDW  Q+  +I TE+CGFVTIL
Sbjct:   228 LQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATELCGFVTIL 287

Query:   173 SGTFLLHKTKDAVDGSSAS 191
             SGTFLLHKTKD   G+SAS
Sbjct:   288 SGTFLLHKTKDM--GNSAS 304

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2141742 AT4G38730 "AT4G38730" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 95/161 (59%), Positives = 125/161 (77%)

Query:    53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
             P  GQT+++VYIG+CSL+GSL+VMS+KA+GIA+KLTFEG+NQ+ YP+TW F M+  +CV+
Sbjct:   165 PLCGQTNILVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWFFAMVAAICVV 224

Query:   113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
              QM YLNKALDTFN A+VSPIYYVMFT+LTI+AS IMFKDW+ QN   I +EICGF+T+L
Sbjct:   225 MQMIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTDSIASEICGFITVL 284

Query:   173 SGTFLLHKTKDAVDGSSASIQMRMS-KHSDE----NAYDPE 208
             +GT +LH T++    S   ++ + S K  DE    + Y PE
Sbjct:   285 TGTVILHSTREEEQASPRRMRWQDSGKSFDEEHLTSLYSPE 325

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2047112 AT2G21120 [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 83/143 (58%), Positives = 118/143 (82%)

Query:    53 PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
             P  GQT+++VYIG+CSL+G+L+VMS+KA+GIA+KLT EG++Q+ YPQTW+F M+ + CV+
Sbjct:   165 PLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVV 224

Query:   113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
             TQ+ YLNKALDTFN A+VSP+YYVMFT+LTI+AS IMFKDW  Q+   + +E+CGF+T+L
Sbjct:   225 TQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVL 284

Query:   173 SGTFLLHKTKDAVDGSSASIQMR 195
             +GT +LH T++     ++S  +R
Sbjct:   285 TGTMILHGTREEEQQQASSEHVR 307

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

CGD|CAL0004327 orf19.5352 [Candida albicans (taxid:5476)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 65/129 (50%), Positives = 98/129 (75%)

Query:    51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
             I+P+YG T+ M+Y+ +CS VGS+SVMS+KA GIALKLT  G NQ  +  T++F ++V +C
Sbjct:   163 IVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALC 222

Query:   111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
             ++TQMNY NKALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +   I++ + GF+ 
Sbjct:   223 IVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLI 282

Query:   171 ILSGTFLLH 179
             I SG +LL+
Sbjct:   283 IFSGVYLLN 291

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A5P7 CaO19.12812 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 65/129 (50%), Positives = 98/129 (75%)

Query:    51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
             I+P+YG T+ M+Y+ +CS VGS+SVMS+KA GIALKLT  G NQ  +  T++F ++V +C
Sbjct:   163 IVPKYGNTNPMIYLSICSSVGSISVMSIKAFGIALKLTLGGNNQFTHVSTYLFLIVVALC 222

Query:   111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
             ++TQMNY NKALD F+T++V+P+YYV FT+ T+ AS I+FK ++  +   I++ + GF+ 
Sbjct:   223 IVTQMNYFNKALDQFDTSIVNPLYYVTFTTFTLAASFILFKGFNTSSAVDIISLLIGFLI 282

Query:   171 ILSGTFLLH 179
             I SG +LL+
Sbjct:   283 IFSGVYLLN 291

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NMK8 NIPAL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 64/133 (48%), Positives = 95/133 (71%)

Query:    51 ILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVC 110
             + P YG++++++Y+ +CS++G+ SV SVK LGIA+K  F G   L +P TWI  + ++  
Sbjct:   171 LAPRYGRSNILIYLTICSVIGAFSVSSVKGLGIAIKGFFAGQPVLQHPLTWILVITLVAS 230

Query:   111 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT 170
             + TQ+NYLNKALD FNT++V PIYYV+FT++ I  S+I+FK+W       I+  +CGF+T
Sbjct:   231 ITTQINYLNKALDIFNTSLVFPIYYVLFTTIVITTSIILFKEWVAMTVVDIIGTVCGFLT 290

Query:   171 ILSGTFLLHKTKD 183
             I+ G FLLH  KD
Sbjct:   291 IILGVFLLHAFKD 303

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	1e-72

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score =  222 bits (567), Expect = 1e-72
 Identities = 84/135 (62%), Positives = 107/135 (79%)

Query: 53  PEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVLVCVI 112
           P +GQT+++VYI +CSL+GSL+VMSVKALGIA+KLTF G NQL YPQ WIF ++V+ CV+
Sbjct: 165 PRHGQTNILVYITICSLIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVV 224

Query: 113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL 172
           TQ+NYLNKALD FNT++V+P+YYV FT+  I AS I+FK+W  Q+   I  E+CGF TIL
Sbjct: 225 TQINYLNKALDIFNTSIVTPVYYVFFTTSVIAASAILFKEWLGQSFDDIAGELCGFFTIL 284

Query: 173 SGTFLLHKTKDAVDG 187
            GTFLLH T+D    
Sbjct: 285 LGTFLLHATRDIEFS 299

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.76
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.57
PRK11431	105	multidrug efflux system protein; Provisional	94.34
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	93.79
COG2510	140	Predicted membrane protein [Function unknown]	93.57
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	93.48
PRK10650	109	multidrug efflux system protein MdtI; Provisional	93.17
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	91.59
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	90.95
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	87.85
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	87.72
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	85.26
COG2076	106	EmrE Membrane transporters of cations and cationic	83.7
PF13536	113	EmrE: Multidrug resistance efflux transporter	80.47

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.9e-48  Score=351.28  Aligned_cols=167  Identities=56%  Similarity=0.903  Sum_probs=163.0

Q ss_pred             cCcchhhhhHHHHHHHHhhheeeecccCcceeEEEEEEecccCCeeeehhHHHHHHHHHHhcCCcccchhHHHHHHHHHH
Q 027615           29 NGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIVL  108 (221)
Q Consensus        29 ~~~~~~~y~~~~~~~~l~Li~~~~pr~G~~~ilvyi~IcsllGs~TVl~~K~~~~llk~t~~G~nqf~~~~tyv~li~lv  108 (221)
                      ..|+|++|+.+.++...+++++++||+|++|+++|+++||++||+||+++|++|+++|++++|+||+.||+||+++++++
T Consensus       155 ~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~  234 (335)
T KOG2922|consen  155 TEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVA  234 (335)
T ss_pred             cCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccCCCCCCC
Q 027615          109 VCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDGS  188 (221)
Q Consensus       109 v~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~~~~~~  188 (221)
                      .|+++|++|||||||+|||++|.|+|||+||+++|++|+|+||||++++..|+.+++|||++++.|+|+|+++||.+.+.
T Consensus       235 ~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~  314 (335)
T KOG2922|consen  235 TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISL  314 (335)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             Ccccccc
Q 027615          189 SASIQMR  195 (221)
Q Consensus       189 ~~~~~~~  195 (221)
                      .++.+++
T Consensus       315 ~s~~~~~  321 (335)
T KOG2922|consen  315 ASYNSMS  321 (335)
T ss_pred             ccccccc
Confidence            8777665

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=2.1e-42  Score=312.30  Aligned_cols=161  Identities=38%  Similarity=0.695  Sum_probs=156.3

Q ss_pred             ccCcchhhhhHHHHHHHHhhheeeecccCcceeEEEEEEecccCCeeeehhHHHHHHHHHHhcCCcccchhHHHHHHHHH
Q 027615           28 CNGASFSSVCSFGSSCSFCTRRSILPEYGQTHVMVYIGVCSLVGSLSVMSVKALGIALKLTFEGMNQLIYPQTWIFTMIV  107 (221)
Q Consensus        28 ~~~~~~~~y~~~~~~~~l~Li~~~~pr~G~~~ilvyi~IcsllGs~TVl~~K~~~~llk~t~~G~nqf~~~~tyv~li~l  107 (221)
                      ..+|+|+.|..+.+++.+.++++..||+|+||+++|+++||++||+||+++|+++++++++++|+|||.||.+|++++++
T Consensus       140 ~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~  219 (300)
T PF05653_consen  140 LSQPGFLVYFILVLVLILILIFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVL  219 (300)
T ss_pred             hcCcceehhHHHHHHHHHHHHHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccCCCCCC
Q 027615          108 LVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDAVDG  187 (221)
Q Consensus       108 vv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~~~~~  187 (221)
                      ++|+++|++||||||++||+++|+|+||++||++++++|+|+||||+++++++++++++|+++++.||++|+.+||++++
T Consensus       220 v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  220 VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             C
Q 027615          188 S  188 (221)
Q Consensus       188 ~  188 (221)
                      +
T Consensus       300 ~  300 (300)
T PF05653_consen  300 Q  300 (300)
T ss_pred             C
Confidence            3

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.76  E-value=0.054  Score=42.91  Aligned_cols=82  Identities=17%  Similarity=0.204  Sum_probs=60.1

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhh
Q 027615           93 NQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL  172 (221)
Q Consensus        93 nqf~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~  172 (221)
                      +.|+++.+.+.   .+++...-+.+|.+|++..+-++.+|+-=..=+..+.+.|.++|+|  ..++.++    .|..+++
T Consensus        25 ~gf~~~~~~i~---~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e--~~~~~~~----~gi~lIi   95 (110)
T PRK09541         25 EGFTRLWPSVG---TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPAI----IGMMLIC   95 (110)
T ss_pred             cCCCchhHHHH---HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence            45777777663   4566677788999999999877766665555556677789999998  4455554    5777899


Q ss_pred             heeeEecccCC
Q 027615          173 SGTFLLHKTKD  183 (221)
Q Consensus       173 ~GV~LLs~~k~  183 (221)
                      .||.+|+...+
T Consensus        96 ~GVi~l~l~~~  106 (110)
T PRK09541         96 AGVLVINLLSR  106 (110)
T ss_pred             HHHHHHhcCCC
Confidence            99999976543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=94.57  E-value=0.06  Score=43.65  Aligned_cols=73  Identities=16%  Similarity=0.212  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhh-hhhhccCCCCchhHHHHHHHHHHhhheeeEecccCCC
Q 027615          106 IVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASV-IMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDA  184 (221)
Q Consensus       106 ~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~-IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~~  184 (221)
                      .-+++-..-....+.+|+.-|.+...|+....+....+.+-. ++|+|  ..++.+    ..|..+++.||++++..+++
T Consensus        53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E--~ls~~~----~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE--TFSLKK----TLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHH----HHHHHHHHHHHHHhccCCCC
Confidence            444556667788899999999999999988877555555544 48888  445544    56888899999999865543

>PRK11431 multidrug efflux system protein; Provisional

Probab=94.34  E-value=0.088  Score=41.45  Aligned_cols=81  Identities=12%  Similarity=0.237  Sum_probs=55.9

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhh
Q 027615           93 NQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL  172 (221)
Q Consensus        93 nqf~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~  172 (221)
                      +.|+++.++++.   +++...=.++|.+|++.-+.++.+++.=..=+..+.+.|.++|+|  ..++.++    +|+..++
T Consensus        24 ~gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e--~~~~~~~----~gi~lIi   94 (105)
T PRK11431         24 HGFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE--SASPARL----LSLALIV   94 (105)
T ss_pred             hCCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence            568888777654   555666788999999987755544443333345555678889998  4555554    5677899


Q ss_pred             heeeEecccC
Q 027615          173 SGTFLLHKTK  182 (221)
Q Consensus       173 ~GV~LLs~~k  182 (221)
                      .||.+|+..+
T Consensus        95 ~GVv~l~l~~  104 (105)
T PRK11431         95 AGIIGLKLST  104 (105)
T ss_pred             HHHHhhhccC
Confidence            9999886543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=93.79  E-value=0.16  Score=39.93  Aligned_cols=80  Identities=19%  Similarity=0.311  Sum_probs=58.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhhe
Q 027615           95 LIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSG  174 (221)
Q Consensus        95 f~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~G  174 (221)
                      +++|.........+++...-...+-++++.-|.++..|+-+ .=...+.+.|..+|+|  +.++.++    .|..+++.|
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E--~ls~~~~----~Gi~lii~G  103 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHE--PVSPRHW----CGVAFIIGG  103 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHHHH
Confidence            45554444444445566667788999999999999999998 5566677888999998  5676665    466677788


Q ss_pred             eeEeccc
Q 027615          175 TFLLHKT  181 (221)
Q Consensus       175 V~LLs~~  181 (221)
                      |.+++++
T Consensus       104 v~~i~~~  110 (111)
T PRK15051        104 IVILGST  110 (111)
T ss_pred             HHHHhcc
Confidence            8777653

>COG2510 Predicted membrane protein [Function unknown]

Probab=93.57  E-value=0.53  Score=39.18  Aligned_cols=82  Identities=22%  Similarity=0.334  Sum_probs=53.9

Q ss_pred             HhcCCcccc---hhHHHHH--HHHHHHHHHHHHHHHHHHhcccCceeeccc--hhhhhHHHHhhhhhhhhhccCCCCchh
Q 027615           88 TFEGMNQLI---YPQTWIF--TMIVLVCVITQMNYLNKALDTFNTAVVSPI--YYVMFTSLTILASVIMFKDWDRQNPTQ  160 (221)
Q Consensus        88 t~~G~nqf~---~~~tyv~--li~lvv~av~Ql~yLNkAL~~fdtsiVvPi--yyv~fTt~tIi~s~IlF~Ef~~~s~~~  160 (221)
                      ...|+-|-.   .+-.|.+  +-.+...+--+.+|  +||+.-+++.|+|+  .++.++   ++=|.++.+|  +++..+
T Consensus        51 ~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf--~ALk~G~as~VvPldk~svvl~---~lls~lfL~E--~ls~~~  123 (140)
T COG2510          51 LVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYF--RALKKGKASRVVPLDKTSVVLA---VLLSILFLGE--RLSLPT  123 (140)
T ss_pred             HhcCceecccccCcceehhhhHHHHHHHHHHHHHH--HHHhcCCcceEEEcccccHHHH---HHHHHHHhcC--CCCHHH
Confidence            345665544   4444444  34444334444444  89999999999999  444443   3447778887  556555


Q ss_pred             HHHHHHHHHHhhheeeEecc
Q 027615          161 IVTEICGFVTILSGTFLLHK  180 (221)
Q Consensus       161 ii~f~~G~lii~~GV~LLs~  180 (221)
                      +    .|++.+.+|+.+++.
T Consensus       124 ~----iG~~LI~~Gailvs~  139 (140)
T COG2510         124 W----IGIVLIVIGAILVSL  139 (140)
T ss_pred             H----HHHHHHHhCeeeEec
Confidence            4    578889999999875

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=93.48  E-value=0.16  Score=40.90  Aligned_cols=72  Identities=19%  Similarity=0.335  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccCC
Q 027615          106 IVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKD  183 (221)
Q Consensus       106 ~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~  183 (221)
                      ..+++...=+++|.+|++.-+-++.+|+.=..=+..+.+.|.++|+|  ..+..+    .+|+.+++.||.+++...+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E--~~s~~~----~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE--SLSLMK----IAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHhhcCCC
Confidence            45566667788999999998888777765445556666788999998  445444    4677889999999876554

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=93.17  E-value=0.15  Score=40.47  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=55.4

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhh
Q 027615           93 NQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTIL  172 (221)
Q Consensus        93 nqf~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~  172 (221)
                      +.|++|...+.   .++....=.++|.+|+|.-+-++.+|+-=..=+..+.+.|.++|+|  ..++.++    .|+.+++
T Consensus        30 ~gf~~~~~~~~---~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e--~~~~~~~----~gi~lIi  100 (109)
T PRK10650         30 DGFRRKIYGIL---SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ--RLNRKGW----IGLVLLL  100 (109)
T ss_pred             cCCcchHHHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHHH----HHHHHHH
Confidence            56787777553   3555566678999999987776665555555556677789999998  4455554    5677788


Q ss_pred             heeeEec
Q 027615          173 SGTFLLH  179 (221)
Q Consensus       173 ~GV~LLs  179 (221)
                      .||.+|+
T Consensus       101 ~GVi~lk  107 (109)
T PRK10650        101 AGMVMIK  107 (109)
T ss_pred             HHHHHhc
Confidence            8888774

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=91.59  E-value=0.36  Score=36.60  Aligned_cols=68  Identities=13%  Similarity=0.083  Sum_probs=33.5

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHH
Q 027615           93 NQLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEI  165 (221)
Q Consensus        93 nqf~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~  165 (221)
                      +.++++..++.   .+.+-..-+.++.+|++.-|.++..|+.-..=+..+.+.|..+|+|  ..++.++++..
T Consensus        24 ~g~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E--~~s~~~~~gi~   91 (93)
T PF00893_consen   24 HGFTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE--SLSLSKWLGIG   91 (93)
T ss_dssp             ----------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHHH
T ss_pred             HhhcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHhhee
Confidence            45666655543   3346666778999999999999999998877778888899999998  56777766543

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=90.95  E-value=0.49  Score=41.70  Aligned_cols=75  Identities=17%  Similarity=0.278  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEec
Q 027615          100 TWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLH  179 (221)
Q Consensus       100 tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs  179 (221)
                      .|..++............+++|+++=|++.+.|+.|.. -..+.+-|.++++|  +.+..+++    |..+.+.|++++.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~-p~~~~l~~~~~~~e--~~~~~~~~----g~~~~~~Gv~ll~  134 (281)
T TIGR03340        62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSS-PLLVAIWATLTLGE--TLSPLAWL----GILIITLGLLVLG  134 (281)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhh-HHHHHHHHHHHHcC--CCCHHHHH----HHHHHHHHHHHHh
Confidence            34444455556667777899999999999999999987 66777778888998  46777765    5556668887776


Q ss_pred             cc
Q 027615          180 KT  181 (221)
Q Consensus       180 ~~  181 (221)
                      ..
T Consensus       135 ~~  136 (281)
T TIGR03340       135 LS  136 (281)
T ss_pred             cc
Confidence            44

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=87.85  E-value=2.3  Score=38.17  Aligned_cols=72  Identities=22%  Similarity=0.386  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccCCC
Q 027615          110 CVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDA  184 (221)
Q Consensus       110 ~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~~  184 (221)
                      -++.|+-|. .|.+.=+.++-.|++++.=-+.+.+.|.++|+|+.  +..+......|+++++.|+++++..+++
T Consensus        69 w~ig~~~~~-~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~--t~~~~~~~~~g~~l~l~G~~l~~~~~~~  140 (290)
T TIGR00776        69 WALGQINQF-KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWS--TSIQTLLGLLALILIIIGVYLTSRSKDK  140 (290)
T ss_pred             HHhhhhhHH-HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhHheEEecccc
Confidence            444555554 56777777778888886555577788999999987  5667777899999999999999877644

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=87.72  E-value=3.6  Score=37.60  Aligned_cols=91  Identities=19%  Similarity=0.255  Sum_probs=63.2

Q ss_pred             cccc-hhHHH-HHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHH
Q 027615           93 NQLI-YPQTW-IFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVT  170 (221)
Q Consensus        93 nqf~-~~~ty-v~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~li  170 (221)
                      .++. ++..| +-++.=+.-++-|+.-+ ++.+.-.-+.-.|+-=.+=-..+.+.|.++|+||.+  ..+.+.=+.++++
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf-~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~--~~~~~~G~~Al~l  112 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQF-KSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTT--TTQKIIGFLALVL  112 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCC--cchHHHHHHHHHH
Confidence            4454 23333 33444445566676655 788888889999997766667777889999999995  4555555668899


Q ss_pred             hhheeeEecccCCCCC
Q 027615          171 ILSGTFLLHKTKDAVD  186 (221)
Q Consensus       171 i~~GV~LLs~~k~~~~  186 (221)
                      ++.|+.+-+.++++++
T Consensus       113 iiiGv~lts~~~~~~~  128 (269)
T PF06800_consen  113 IIIGVILTSYQDKKSD  128 (269)
T ss_pred             HHHHHHHhcccccccc
Confidence            9999987665554443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=85.26  E-value=2.7  Score=36.95  Aligned_cols=66  Identities=14%  Similarity=0.155  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEe
Q 027615          105 MIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLL  178 (221)
Q Consensus       105 i~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LL  178 (221)
                      ...+.+++ -....|+|+++-+++.+.|..|.. -..+++-|.++++|-  .++.    -..|..+++.|+.+|
T Consensus       216 ~~~~~s~l-~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~lgE~--~~~~----~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       216 LGGLMIGG-AYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWFLNER--WYLT----RLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHH-HHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHHhCCC--ccHH----HHHHHHHHHHhHHhC
Confidence            33344444 344678999999999999999875 566667788888983  3443    445667788888764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=83.70  E-value=1.4  Score=35.03  Aligned_cols=75  Identities=24%  Similarity=0.286  Sum_probs=51.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCceeeccchhhhhHH----HHhhhhhhhhhccCCCCchhHHHHHHHHH
Q 027615           94 QLIYPQTWIFTMIVLVCVITQMNYLNKALDTFNTAVVSPIYYVMFTS----LTILASVIMFKDWDRQNPTQIVTEICGFV  169 (221)
Q Consensus        94 qf~~~~tyv~li~lvv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt----~tIi~s~IlF~Ef~~~s~~~ii~f~~G~l  169 (221)
                      .|+++..++   +++++...-..+|-+|++.=|-.+    -|..|+-    .+.+.|.++|+|  ..++.++    .|+.
T Consensus        26 gf~~~~~~i---l~~v~~~~sf~~Ls~alk~ipvgv----AYAiW~GiG~v~~~l~g~~~f~E--~l~~~~~----~gl~   92 (106)
T COG2076          26 GFTRLWPSI---LTIVGYGLSFYLLSLALKTIPLGV----AYAIWTGIGIVGTALVGVLLFGE--SLSLIKL----LGLA   92 (106)
T ss_pred             cccccchHH---HHHHHHHHHHHHHHHHHhhCchHH----HHHHHHHHHHHHHHHHHHHhcCC--cCCHHHH----HHHH
Confidence            355555544   445566677889999999866544    5666654    455688999998  3455444    5677


Q ss_pred             HhhheeeEeccc
Q 027615          170 TILSGTFLLHKT  181 (221)
Q Consensus       170 ii~~GV~LLs~~  181 (221)
                      +++.||..|+..
T Consensus        93 LiiaGvi~Lk~~  104 (106)
T COG2076          93 LILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHhhhc
Confidence            788999887654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=80.47  E-value=2.5  Score=32.37  Aligned_cols=64  Identities=25%  Similarity=0.312  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccCCC
Q 027615          113 TQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTKDA  184 (221)
Q Consensus       113 ~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k~~  184 (221)
                      ...-....|++.-+ ..+.|+++ .....+.+-|.++|+|  +.++.++    .|.+++++||.++..++..
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~e--r~~~~~~----~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKE--RLSPRRW----LAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcC--CCCHHHH----HHHHHHHHHHHHHhhhhcc
Confidence            44555668888888 56666655 5778888889999997  5666654    4667788899888766544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.63
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	95.5

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.63  E-value=0.00071  Score=54.21  Aligned_cols=68  Identities=21%  Similarity=0.291  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccC
Q 027615          109 VCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTK  182 (221)
Q Consensus       109 v~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k  182 (221)
                      ++...-...+++|++.-+.+.+.|+.-.+=...+.+.|.++|+|  ..++.+    +.|.++++.||++++..+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE--~ls~~~----~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC--------C----HHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHHhcCC
Confidence            34444466889999999999999996556666677888999998  345555    568888999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=95.50  E-value=0.015  Score=44.31  Aligned_cols=69  Identities=20%  Similarity=0.301  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHhcccCceeeccchhhhhHHHHhhhhhhhhhccCCCCchhHHHHHHHHHHhhheeeEecccC
Q 027615          108 LVCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEICGFVTILSGTFLLHKTK  182 (221)
Q Consensus       108 vv~av~Ql~yLNkAL~~fdtsiVvPiyyv~fTt~tIi~s~IlF~Ef~~~s~~~ii~f~~G~lii~~GV~LLs~~k  182 (221)
                      +++...-...+++|++.-|.+.+.|+.=..=...+.+.|.++|+|  ..++.+    ..|..+++.||.+++..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E--~~s~~~----~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPA----IIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHHhcCC
Confidence            334445567889999999999999997677777788899999998  456555    567888999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00