Citrus Sinensis ID: 027643

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
MIQLRFLKSPLLSSSNILSNFSPKPRTGTLLPHPVTKFKPLSQMDSYSTTTTSSSSSSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKTT
cccHHcccHHHHHHHHccccccccccccccccccccccccccccccccccEEcccccccccEEEEEEccccccEEEEEEEcccccccEEEEccccccHHHHHHHHHHcccEEEEEEcccccHHHHHcHHHHHHHccccEEEEcccccccccEEcccccEEEEccEEEEEEEcccccccccEEEEccccccccccEEEEccEEcccccccccccccccccc
ccEEHEEccHHHHHHHHHHccccccHHHccccccccccccHHHHHHHcccccccccccccHHHEEccccccccEEEEEEccccccccEEEEccccccHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHccccEEEccccccccccEEEccccEEEEEEEEEEEEEcccccccEEEEEEccccccccccEEEEccEEEEcccccccccccccccc
miqlrflkspllsssnilsnfspkprtgtllphpvtkfkplsqmdsysttttssssssskLLFRQTFEKESSTYTYLLAdvnhpdkpallidpvdktvdRDLNVIKELGLKLVYAMNThvhadhvtgtglikskvpgvKSIISkasgskadlhvehgdkvsfgdlflevratpghtlgcvtyvsgegpdqpqprmaftgdallirgcgrtdfqvlglktt
miqlrflkspllsssnilsnfspkprtgtllphpVTKFKPLSQMDSysttttssssssskLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHvtgtglikskvPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRtdfqvlglktt
MIQLRFlkspllsssnilsnfspkPRTGTLLPHPVTKFKPLSQMDsysttttsssssssKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVksiiskasgskaDLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKTT
**********************************************************************SSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISK*****ADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVS**********MAFTGDALLIRGCGRTDFQVLG****
********SPLLSSSNILSNFS**********HPVTKFKPLSQ*****************LLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDF*V******
MIQLRFLKSPLLSSSNILSNFSPKPRTGTLLPHPVTKFKPLSQ*******************FRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKTT
MIQLRFLKSPLLSSSNILSNFSPKPRTGTLLPHPVTKFKPLSQMDSYSTTTTSS**SSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDF********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIQLRFLKSPLLSSSNILSNFSPKPRTGTLLPHPVTKFKPLSQMDSYSTTTTSSSSSSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKTT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query220 2.2.26 [Sep-21-2011]
Q9C8L4294 Hydroxyacylglutathione hy yes no 0.7 0.523 0.857 1e-75
Q9DCM0254 Protein ETHE1, mitochondr yes no 0.727 0.629 0.577 1e-48
Q3T094254 Protein ETHE1, mitochondr yes no 0.686 0.594 0.566 1e-47
O95571254 Protein ETHE1, mitochondr yes no 0.727 0.629 0.553 4e-47
B1WUT9257 Hydroxyacylglutathione hy no no 0.609 0.521 0.323 3e-11
A6WXE0 260 Hydroxyacylglutathione hy yes no 0.445 0.376 0.407 4e-11
Q0AM20 256 Hydroxyacylglutathione hy yes no 0.627 0.539 0.354 6e-11
B4F6K2 313 Hydroxyacylglutathione hy no no 0.609 0.428 0.309 1e-10
Q9DB32 283 Hydroxyacylglutathione hy no no 0.595 0.462 0.301 1e-10
Q3B7M2 308 Hydroxyacylglutathione hy no no 0.609 0.435 0.309 2e-10
>sp|Q9C8L4|GLO2O_ARATH Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3 Back     alignment and function desciption
 Score =  282 bits (722), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 132/154 (85%), Positives = 145/154 (94%)

Query: 60  KLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTH 119
           KLLFRQ FE ESST+TYLLADV+HPDKPALLIDPVDKTVDRDL +I ELGLKL+YAMNTH
Sbjct: 51  KLLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTH 110

Query: 120 VHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGC 179
           VHADHVTGTGL+K+K+PGVKS+ISKASGSKADL +E GDKVS GD++LEVRATPGHT GC
Sbjct: 111 VHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGC 170

Query: 180 VTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 213
           VTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ
Sbjct: 171 VTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQ 204
Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 6
>sp|Q9DCM0|ETHE1_MOUSE Protein ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2 Back     alignment and function description
>sp|Q3T094|ETHE1_BOVIN Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1 Back     alignment and function description
>sp|O95571|ETHE1_HUMAN Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2 Back     alignment and function description
>sp|B1WUT9|GLO2_CYAA5 Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain ATCC 51142) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|A6WXE0|GLO2_OCHA4 Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q0AM20|GLO2_MARMM Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|B4F6K2|GLO2_XENTR Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1 Back     alignment and function description
>sp|Q9DB32|HAGHL_MOUSE Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1 Back     alignment and function description
>sp|Q3B7M2|GLO2_BOVIN Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
224056583251 predicted protein [Populus trichocarpa] 0.731 0.641 0.875 1e-78
255558692301 glyoxalase II, putative [Ricinus communi 0.927 0.677 0.75 6e-78
224085383265 predicted protein [Populus trichocarpa] 0.772 0.641 0.805 2e-76
225446805269 PREDICTED: hydroxyacylglutathione hydrol 0.740 0.605 0.834 4e-76
302143529258 unnamed protein product [Vitis vinifera] 0.740 0.631 0.834 5e-76
225462956286 PREDICTED: hydroxyacylglutathione hydrol 0.736 0.566 0.820 9e-76
388499798288 unknown [Lotus japonicus] 0.7 0.534 0.863 3e-75
356549576 377 PREDICTED: hydroxyacylglutathione hydrol 0.7 0.408 0.857 4e-75
296082824247 unnamed protein product [Vitis vinifera] 0.704 0.627 0.845 9e-75
8671869310 Contains similarity to an unknown glyoxa 0.718 0.509 0.841 1e-74
>gi|224056583|ref|XP_002298922.1| predicted protein [Populus trichocarpa] gi|222846180|gb|EEE83727.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 141/161 (87%), Positives = 154/161 (95%)

Query: 53  SSSSSSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKL 112
           ++SS SSKL FRQ FEKESSTYTYLLADV+HPDKPALLIDPVDKTVDRDL+++KELGLKL
Sbjct: 5   TASSQSSKLFFRQLFEKESSTYTYLLADVSHPDKPALLIDPVDKTVDRDLSLVKELGLKL 64

Query: 113 VYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRAT 172
           +YA+NTHVHADH+TGTGLIK+K PGVKSIISKASGSKAD+ VE GDKVSFGDLFLEVRAT
Sbjct: 65  IYALNTHVHADHITGTGLIKTKSPGVKSIISKASGSKADILVEPGDKVSFGDLFLEVRAT 124

Query: 173 PGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 213
           PGHT GCVTYV+G+GPDQPQPRMAFTGDALLIRGCGRTDFQ
Sbjct: 125 PGHTSGCVTYVTGDGPDQPQPRMAFTGDALLIRGCGRTDFQ 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558692|ref|XP_002520370.1| glyoxalase II, putative [Ricinus communis] gi|223540417|gb|EEF41986.1| glyoxalase II, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224085383|ref|XP_002307560.1| predicted protein [Populus trichocarpa] gi|222857009|gb|EEE94556.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225446805|ref|XP_002279121.1| PREDICTED: hydroxyacylglutathione hydrolase 3, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143529|emb|CBI22090.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225462956|ref|XP_002270140.1| PREDICTED: hydroxyacylglutathione hydrolase 3, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|388499798|gb|AFK37965.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356549576|ref|XP_003543168.1| PREDICTED: hydroxyacylglutathione hydrolase 3, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|296082824|emb|CBI22125.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|8671869|gb|AAF78432.1|AC018748_11 Contains similarity to an unknown glyoxalase II from Arabidopsis thaliana gb|U74610 and contains a Metallo-beta-lactamase PF|00753 domain. ESTs gb|AI999524, gb|AI100252, gb|AI099807, gb|T44412, gb|T42759, gb|R65540 come from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
TAIR|locus:2024922294 GLY3 "AT1G53580" [Arabidopsis 0.822 0.615 0.681 6e-64
ZFIN|ZDB-GENE-040426-2503279 ethe1 "ethylmalonic encephalop 0.65 0.512 0.614 4e-42
MGI|MGI:1913321254 Ethe1 "ethylmalonic encephalop 0.659 0.570 0.568 5.3e-40
UNIPROTKB|E2RFL0254 ETHE1 "Uncharacterized protein 0.659 0.570 0.549 6.8e-40
RGD|1311034254 Ethe1 "ethylmalonic encephalop 0.659 0.570 0.562 1.1e-39
UNIPROTKB|Q3T094254 ETHE1 "Protein ETHE1, mitochon 0.659 0.570 0.542 2.9e-39
UNIPROTKB|O95571254 ETHE1 "Protein ETHE1, mitochon 0.659 0.570 0.549 3.7e-39
WB|WBGene00007886237 ethe-1 [Caenorhabditis elegans 0.654 0.607 0.493 9.5e-34
FB|FBgn0050022279 CG30022 [Drosophila melanogast 0.645 0.508 0.490 1.5e-33
UNIPROTKB|I3LLM9125 LOC100523003 "Uncharacterized 0.459 0.808 0.504 3.3e-24
TAIR|locus:2024922 GLY3 "AT1G53580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 124/182 (68%), Positives = 140/182 (76%)

Query:    32 PHPVTKFKPLSQMDXXXXXXXXXXXXXXKLLFRQTFEKESSTYTYLLADVNHPDKPALLI 91
             P P+ +  P + +               KLLFRQ FE ESST+TYLLADV+HPDKPALLI
Sbjct:    24 PRPL-RSPPPTFLRSVMGSSSSFSSSSSKLLFRQLFENESSTFTYLLADVSHPDKPALLI 82

Query:    92 DPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXXD 151
             DPVDKTVDRDL +I ELGLKL+YAMNTHVHADHVTGTGL+K+K+PGV            D
Sbjct:    83 DPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKAD 142

Query:   152 LHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTD 211
             L +E GDKVS GD++LEVRATPGHT GCVTYV+GEG DQPQPRMAFTGDA+LIRGCGRTD
Sbjct:   143 LFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTD 202

Query:   212 FQ 213
             FQ
Sbjct:   203 FQ 204
GO:0004416 "hydroxyacylglutathione hydrolase activity" evidence=ISS
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=ISS
GO:0009651 "response to salt stress" evidence=IEP
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IDA
GO:0047951 "glutathione thiolesterase activity" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0009960 "endosperm development" evidence=IMP
GO:0048316 "seed development" evidence=IMP
GO:0050313 "sulfur dioxygenase activity" evidence=IDA
GO:0055114 "oxidation-reduction process" evidence=IDA
ZFIN|ZDB-GENE-040426-2503 ethe1 "ethylmalonic encephalopathy 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1913321 Ethe1 "ethylmalonic encephalopathy 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFL0 ETHE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1311034 Ethe1 "ethylmalonic encephalopathy 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T094 ETHE1 "Protein ETHE1, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O95571 ETHE1 "Protein ETHE1, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00007886 ethe-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0050022 CG30022 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|I3LLM9 LOC100523003 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O95571ETHE1_HUMAN3, ., -, ., -, ., -0.55350.72720.6299yesno
Q9DCM0ETHE1_MOUSE3, ., -, ., -, ., -0.57730.72720.6299yesno
Q9C8L4GLO2O_ARATH3, ., 1, ., 2, ., 60.85710.70.5238yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.20.921
3rd Layer3.1.2.60.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_kg.C_LG_I000098
hydroxyacylglutathione hydrolase (EC-3.1.2.6) (252 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
PLN02962251 PLN02962, PLN02962, hydroxyacylglutathione hydrola 1e-118
TIGR03413 248 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrol 5e-22
smart00849177 smart00849, Lactamase_B, Metallo-beta-lactamase su 2e-21
COG0491252 COG0491, GloB, Zn-dependent hydrolases, including 3e-21
PLN02469 258 PLN02469, PLN02469, hydroxyacylglutathione hydrola 8e-18
pfam00753148 pfam00753, Lactamase_B, Metallo-beta-lactamase sup 3e-11
PRK10241 251 PRK10241, PRK10241, hydroxyacylglutathione hydrola 5e-08
PLN02398 329 PLN02398, PLN02398, hydroxyacylglutathione hydrola 9e-08
>gnl|CDD|178547 PLN02962, PLN02962, hydroxyacylglutathione hydrolase Back     alignment and domain information 
 Score =  335 bits (862), Expect = e-118
 Identities = 145/163 (88%), Positives = 158/163 (96%)

Query: 51  TTSSSSSSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGL 110
           ++SSSSSSSKLLFRQ FEKESSTYTYLLADV+HPDKPALLIDPVDKTVDRDL+++KELGL
Sbjct: 1   SSSSSSSSSKLLFRQLFEKESSTYTYLLADVSHPDKPALLIDPVDKTVDRDLSLVKELGL 60

Query: 111 KLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVR 170
           KL+YAMNTHVHADHVTGTGL+K+K+PGVKSIISKASGSKADL VE GDK+ FGDL+LEVR
Sbjct: 61  KLIYAMNTHVHADHVTGTGLLKTKLPGVKSIISKASGSKADLFVEPGDKIYFGDLYLEVR 120

Query: 171 ATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 213
           ATPGHT GCVTYV+GEGPDQPQPRMAFTGDALLIRGCGRTDFQ
Sbjct: 121 ATPGHTAGCVTYVTGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 163

Length = 251
>gnl|CDD|234201 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178088 PLN02469, PLN02469, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|215223 PLN02398, PLN02398, hydroxyacylglutathione hydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 220
PLN02962251 hydroxyacylglutathione hydrolase 100.0
PLN02469 258 hydroxyacylglutathione hydrolase 99.96
PLN02398 329 hydroxyacylglutathione hydrolase 99.96
TIGR03413 248 GSH_gloB hydroxyacylglutathione hydrolase. Members 99.95
PRK10241 251 hydroxyacylglutathione hydrolase; Provisional 99.94
KOG0813 265 consensus Glyoxylase [General function prediction 99.94
KOG0814237 consensus Glyoxylase [General function prediction 99.94
PRK11921 394 metallo-beta-lactamase/flavodoxin domain-containin 99.83
COG0491252 GloB Zn-dependent hydrolases, including glyoxylase 99.82
smart00849183 Lactamase_B Metallo-beta-lactamase superfamily. Ap 99.81
PRK05452 479 anaerobic nitric oxide reductase flavorubredoxin; 99.79
TIGR00649 422 MG423 conserved hypothetical protein. Contains an 99.76
PF00753194 Lactamase_B: Metallo-beta-lactamase superfamily; I 99.7
PRK11244250 phnP carbon-phosphorus lyase complex accessory pro 99.63
COG0426 388 FpaA Uncharacterized flavoproteins [Energy product 99.62
PRK11539755 ComEC family competence protein; Provisional 99.59
TIGR03307238 PhnP phosphonate metabolism protein PhnP. This fam 99.58
TIGR02649 303 true_RNase_BN ribonuclease BN. Members of this pro 99.56
TIGR00361662 ComEC_Rec2 DNA internalization-related competence 99.56
TIGR02651 299 RNase_Z ribonuclease Z. Processing of the 3-prime 99.54
COG2333293 ComEC Predicted hydrolase (metallo-beta-lactamase 99.52
PRK00685228 metal-dependent hydrolase; Provisional 99.51
TIGR03675 630 arCOG00543 arCOG00543 universal archaeal KH-domain 99.51
PRK02113252 putative hydrolase; Provisional 99.49
PRK05184302 pyrroloquinoline quinone biosynthesis protein PqqB 99.49
COG0595 555 mRNA degradation ribonucleases J1/J2 (metallo-beta 99.48
PRK02126 334 ribonuclease Z; Provisional 99.48
PRK04286298 hypothetical protein; Provisional 99.48
TIGR02108302 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. 99.47
PF12706194 Lactamase_B_2: Beta-lactamase superfamily domain; 99.4
PF14597199 Lactamase_B_5: Metallo-beta-lactamase superfamily; 99.35
COG1236 427 YSH1 Predicted exonuclease of the beta-lactamase f 99.31
PRK00055 270 ribonuclease Z; Reviewed 99.31
COG1782 637 Predicted metal-dependent RNase, consists of a met 99.23
COG1237259 Metal-dependent hydrolases of the beta-lactamase s 99.2
COG1234 292 ElaC Metal-dependent hydrolases of the beta-lactam 99.01
PRK11709 355 putative L-ascorbate 6-phosphate lactonase; Provis 98.99
PF13483163 Lactamase_B_3: Beta-lactamase superfamily domain; 98.91
KOG1136 501 consensus Predicted cleavage and polyadenylation s 98.89
COG1235269 PhnP Metal-dependent hydrolases of the beta-lactam 98.72
KOG1137 668 consensus mRNA cleavage and polyadenylation factor 98.59
TIGR02650277 RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me 98.58
KOG1135 764 consensus mRNA cleavage and polyadenylation factor 98.57
COG2220258 Predicted Zn-dependent hydrolases of the beta-lact 98.52
KOG2121746 consensus Predicted metal-dependent hydrolase (bet 98.28
COG2248304 Predicted hydrolase (metallo-beta-lactamase superf 98.27
KOG4736302 consensus Uncharacterized conserved protein [Funct 98.21
KOG1361 481 consensus Predicted hydrolase involved in interstr 97.84
COG2015 655 Alkyl sulfatase and related hydrolases [Secondary 97.82
PF02112 335 PDEase_II: cAMP phosphodiesterases class-II; Inter 97.67
PF1369163 Lactamase_B_4: tRNase Z endonuclease 96.87
PF14234 285 DUF4336: Domain of unknown function (DUF4336) 94.25
COG5212 356 PDE1 Low-affinity cAMP phosphodiesterase [Signal t 94.07
KOG3798343 consensus Predicted Zn-dependent hydrolase (beta-l 88.07
KOG3592 934 consensus Microtubule-associated proteins [Cytoske 86.44
>PLN02962 hydroxyacylglutathione hydrolase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-33  Score=235.74  Aligned_cols=167  Identities=86%  Similarity=1.284  Sum_probs=143.8

Q ss_pred             CCCCCCCcEEEEEeecCCCcEEEEEEecCCCCCcEEEEeCCCCChHHHHHHHHHcCCCccEEEcCCCCccccCChHHHHh
Q 027643           54 SSSSSSKLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKS  133 (220)
Q Consensus        54 ~~~~~~~l~~~~~~~~~~~~~~~li~~~~~~~~~~ilID~G~~~~~~~~~~l~~~~~~i~~I~iTH~H~DHigG~~~~~~  133 (220)
                      ++..+.+|.|++++..+..+|||+|.+.+..+++++|||||......+++.+++.+.++.+||+||.|+||++|+..|++
T Consensus         4 ~~~~~~~m~~~~~~~~~~~~~~Yll~d~~~~~~~avlIDP~~~~~~~~l~~l~~~g~~i~~Il~TH~H~DHigg~~~l~~   83 (251)
T PLN02962          4 SSSSSSKLLFRQLFEKESSTYTYLLADVSHPDKPALLIDPVDKTVDRDLSLVKELGLKLIYAMNTHVHADHVTGTGLLKT   83 (251)
T ss_pred             CCCCCCceEEEEeecCCceeEEEEEEeCCCCCCEEEEECCCCCcHHHHHHHHHHCCCeeEEEEcCCCCchhHHHHHHHHH
Confidence            34455789999999999999999998742124689999999645788889999999999999999999999999999999


Q ss_pred             hCCCCEEEeecCCCCCCcEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEccCCCCCCCcEEEEcCccccCCcccCCCC
Q 027643          134 KVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ  213 (220)
Q Consensus       134 ~~p~~~v~~~~~~~~~~~~~~~~g~~l~lg~~~i~~~~~pGHt~gs~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~  213 (220)
                      ++|++++++++......+..+++|+.+.+|+.+++++++||||+|+++|++.+..++++.+++|+||++|.+++||+|++
T Consensus        84 ~~~~a~v~~~~~~~~~~d~~l~~g~~i~~g~~~l~vi~tPGHT~g~v~~~~~d~~~~~~~~~lftGD~Lf~~g~Gr~d~~  163 (251)
T PLN02962         84 KLPGVKSIISKASGSKADLFVEPGDKIYFGDLYLEVRATPGHTAGCVTYVTGEGPDQPQPRMAFTGDALLIRGCGRTDFQ  163 (251)
T ss_pred             HCCCCeEEeccccCCCCCEEeCCCCEEEECCEEEEEEECCCCCcCcEEEEeccCCCCCccceEEECCeeccCCcCCCCCC
Confidence            98899999987765556678899999999999999999999999999999864222245679999999999999999999


Q ss_pred             CCCCCCC
Q 027643          214 VLGLKTT  220 (220)
Q Consensus       214 ~~~~~~~  220 (220)
                      +|++++|
T Consensus       164 ~g~~~~l  170 (251)
T PLN02962        164 GGSSDQL  170 (251)
T ss_pred             CCCHHHH
Confidence            9998653

>PLN02469 hydroxyacylglutathione hydrolase Back     alignment and domain information
>PLN02398 hydroxyacylglutathione hydrolase Back     alignment and domain information
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase Back     alignment and domain information
>PRK10241 hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>KOG0813 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>KOG0814 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>smart00849 Lactamase_B Metallo-beta-lactamase superfamily Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>TIGR00649 MG423 conserved hypothetical protein Back     alignment and domain information
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] Back     alignment and domain information
>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PRK11539 ComEC family competence protein; Provisional Back     alignment and domain information
>TIGR03307 PhnP phosphonate metabolism protein PhnP Back     alignment and domain information
>TIGR02649 true_RNase_BN ribonuclease BN Back     alignment and domain information
>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 Back     alignment and domain information
>TIGR02651 RNase_Z ribonuclease Z Back     alignment and domain information
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>PRK00685 metal-dependent hydrolase; Provisional Back     alignment and domain information
>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein Back     alignment and domain information
>PRK02113 putative hydrolase; Provisional Back     alignment and domain information
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional Back     alignment and domain information
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] Back     alignment and domain information
>PRK02126 ribonuclease Z; Provisional Back     alignment and domain information
>PRK04286 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B Back     alignment and domain information
>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A Back     alignment and domain information
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B Back     alignment and domain information
>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00055 ribonuclease Z; Reviewed Back     alignment and domain information
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] Back     alignment and domain information
>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] Back     alignment and domain information
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] Back     alignment and domain information
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional Back     alignment and domain information
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A Back     alignment and domain information
>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type Back     alignment and domain information
>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] Back     alignment and domain information
>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>KOG4736 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair] Back     alignment and domain information
>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 Back     alignment and domain information
>PF13691 Lactamase_B_4: tRNase Z endonuclease Back     alignment and domain information
>PF14234 DUF4336: Domain of unknown function (DUF4336) Back     alignment and domain information
>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] Back     alignment and domain information
>KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
2gcu_A245 X-Ray Structure Of Gene Product From Arabidopsis Th 2e-68
3r2u_A 466 2.1 Angstrom Resolution Crystal Structure Of Metall 3e-10
1qh3_A 260 Human Glyoxalase Ii With Cacodylate And Acetate Ion 1e-08
3tp9_A 474 Crystal Structure Of Alicyclobacillus Acidocaldariu 8e-08
1xm8_A 254 X-Ray Structure Of Glyoxalase Ii From Arabidopsis T 2e-07
4efz_A 298 Crystal Structure Of A Hypothetical Metallo-Beta-La 1e-06
2p18_A 311 Crystal Structure Of The Leishmania Infantum Glyoxa 3e-06
3lvz_A294 New Refinement Of The Crystal Structure Of Bjp-1, A 4e-04
2gmn_A274 Crystal Structure Of Bjp-1, A Subclass B3 Metallo-b 4e-04
2xf4_A210 Crystal Structure Of Salmonella Enterica Serovar Ty 8e-04
>pdb|2GCU|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At1g53580 Length = 245 Back     alignment and structure 
Iteration: 1

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 121/154 (78%), Positives = 133/154 (86%)
Query: 60  KLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTH 119
           KLLFRQ FE ESST+TYLLADV+HPDKPALLIDPVDKTVDRDL +I ELGLKL+YAMNTH
Sbjct: 2   KLLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTH 61
Query: 120 VHADHVTGTGLIKSKVPGVXXXXXXXXXXXXDLHVEHGDKVSFGDLFLEVRATPGHTLGC 179
           VHADHVTGTGL+K+K+PGV            DL +E GDKVS GD++LEVRATPGHT GC
Sbjct: 62  VHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGC 121
Query: 180 VTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 213
           VTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ
Sbjct: 122 VTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQ 155
>pdb|3R2U|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp. Aureus Col Length = 466 Back     alignment and structure
>pdb|1QH3|A Chain A, Human Glyoxalase Ii With Cacodylate And Acetate Ions Present In The Active Site Length = 260 Back     alignment and structure
>pdb|3TP9|A Chain A, Crystal Structure Of Alicyclobacillus Acidocaldarius Protein With Beta-Lactamase And Rhodanese Domains Length = 474 Back     alignment and structure
>pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254 Back     alignment and structure
>pdb|4EFZ|A Chain A, Crystal Structure Of A Hypothetical Metallo-Beta-Lactamase From Burkholderia Pseudomallei Length = 298 Back     alignment and structure
>pdb|2P18|A Chain A, Crystal Structure Of The Leishmania Infantum Glyoxalase Ii Length = 311 Back     alignment and structure
>pdb|3LVZ|A Chain A, New Refinement Of The Crystal Structure Of Bjp-1, A Subclass B3 Metallo-Beta-Lactamase Of Bradyrhizobium Japonicum Length = 294 Back     alignment and structure
>pdb|2GMN|A Chain A, Crystal Structure Of Bjp-1, A Subclass B3 Metallo-beta-lactamase Of Bradyrhizobium Japonicum Length = 274 Back     alignment and structure
>pdb|2XF4|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Ycbl Length = 210 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 2e-79
4efz_A 298 Metallo-beta-lactamase family protein; structural 2e-50
3r2u_A 466 Metallo-beta-lactamase family protein; structural 4e-46
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 1e-42
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 2e-38
1qh5_A 260 Glyoxalase II, protein (hydroxyacylglutathione hyd 4e-30
2qed_A 258 Hydroxyacylglutathione hydrolase; metallo-B- super 2e-28
1xm8_A 254 Glyoxalase II; structural genomics, protein struct 1e-26
2p18_A 311 Glyoxalase II; metalloprotein, beta sandwich, alph 5e-25
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 1e-24
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 2e-24
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 7e-22
4ad9_A 289 Lactb2, beta-lactamase-like protein 2; hydrolase, 1e-16
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 3e-15
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 8e-13
2p97_A201 Hypothetical protein; putative metal-dependent hyd 2e-12
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 2e-12
2vw8_A 303 PA1000, PQSE; quinolone signal response protein, s 1e-11
3adr_A261 Putative uncharacterized protein ST1585; quorum se 7e-10
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 5e-08
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 1e-07
1ztc_A221 Hypothetical protein TM0894; structural genomics, 3e-07
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 3e-07
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 4e-07
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 2e-06
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 2e-06
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 3e-06
2zo4_A 317 Metallo-beta-lactamase family protein; hydrolase; 3e-06
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 6e-06
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 2e-05
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 1e-04
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 3e-04
1vme_A 410 Flavoprotein; TM0755, structural genomics, JCSG, p 4e-04
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 7e-04
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245 Back     alignment and structure
 Score =  236 bits (605), Expect = 2e-79
 Identities = 132/154 (85%), Positives = 145/154 (94%)

Query: 60  KLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTH 119
           KLLFRQ FE ESST+TYLLADV+HPDKPALLIDPVDKTVDRDL +I ELGLKL+YAMNTH
Sbjct: 2   KLLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTH 61

Query: 120 VHADHVTGTGLIKSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGC 179
           VHADHVTGTGL+K+K+PGVKS+ISKASGSKADL +E GDKVS GD++LEVRATPGHT GC
Sbjct: 62  VHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGC 121

Query: 180 VTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQ 213
           VTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ
Sbjct: 122 VTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQ 155
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Length = 298 Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474 Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260 Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Length = 258 Back     alignment and structure
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254 Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311 Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207 Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294 Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 Back     alignment and structure
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289 Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228 Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201 Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303 Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303 Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223 Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219 Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414 Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232 Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Length = 404 Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Length = 227 Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402 Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317 Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Length = 265 Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Length = 398 Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270 Back     alignment and structure
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein STR initiative, PSI, joint center for structural genomics, ELEC transport; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3 Length = 410 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 99.97
4efz_A 298 Metallo-beta-lactamase family protein; structural 99.96
1qh5_A 260 Glyoxalase II, protein (hydroxyacylglutathione hyd 99.96
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 99.94
3r2u_A 466 Metallo-beta-lactamase family protein; structural 99.94
1xm8_A 254 Glyoxalase II; structural genomics, protein struct 99.94
2qed_A 258 Hydroxyacylglutathione hydrolase; metallo-B- super 99.94
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 99.94
2p18_A 311 Glyoxalase II; metalloprotein, beta sandwich, alph 99.93
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 99.93
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 99.9
4ad9_A 289 Lactb2, beta-lactamase-like protein 2; hydrolase, 99.9
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 99.9
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 99.9
4hl2_A243 Beta-lactamase NDM-1; structural genomics, PSI-bio 99.89
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 99.89
2zo4_A 317 Metallo-beta-lactamase family protein; hydrolase; 99.89
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 99.89
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 99.88
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 99.88
2vw8_A 303 PA1000, PQSE; quinolone signal response protein, s 99.87
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 99.87
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 99.87
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 99.86
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 99.86
3esh_A280 Protein similar to metal-dependent hydrolase; stru 99.86
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 99.85
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 99.85
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 99.85
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 99.84
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 99.84
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 99.84
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 99.83
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 99.83
4dik_A 410 Flavoprotein; TM0755, electron transport, DI-iron 99.82
2p97_A201 Hypothetical protein; putative metal-dependent hyd 99.82
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 99.81
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 99.81
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 99.8
1ztc_A221 Hypothetical protein TM0894; structural genomics, 99.8
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 99.8
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 99.8
2cfu_A 658 SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 99.8
3adr_A261 Putative uncharacterized protein ST1585; quorum se 99.8
3zq4_A 555 Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat 99.75
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 99.74
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 99.74
3iek_A 431 Ribonuclease TTHA0252; metallo beta lactamase fold 99.7
2i7x_A 717 Protein CFT2; polyadenylation, metallo-B-lactamase 99.7
2az4_A 429 Hypothetical protein EF2904; structural genomics, 99.68
2yhe_A 668 SEC-alkyl sulfatase; hydrolase, inversion, metallo 99.49
2i7t_A 459 Cleavage and polyadenylation specificity factor 73 99.66
2bib_A 547 CBPE, teichoic acid phosphorylcholine esterase/ ch 99.65
2e7y_A280 TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, 99.65
1y44_A 320 Ribonuclease Z; zinc-dependent metal hydrolase, hy 99.62
2ycb_A 636 Beta-CAsp RNAse, cleavage and polyadenylation spec 99.62
2cbn_A 306 Ribonuclease Z; phosphodiesterase beta lactamase t 99.62
2xr1_A 640 Cleavage and polyadenylation specificity factor 1 99.62
3af5_A 651 Putative uncharacterized protein PH1404; archaeal 99.61
3md7_A293 Beta-lactamase-like; ssgcid, hydrolase, structural 99.61
3kl7_A235 Putative metal-dependent hydrolase; structural gen 99.56
3zwf_A 368 Zinc phosphodiesterase ELAC protein 1; beta-lactam 99.56
3jxp_A321 Coenzyme PQQ synthesis protein B; alpha-beta prote 99.52
2wyl_A 360 L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 99.47
3bv6_A 379 Metal-dependent hydrolase; metallo protein, beta-l 99.44
4b87_A 367 DNA cross-LINK repair 1A protein; dclre1A, DCLRE, 99.43
3rpc_A264 Possible metal-dependent hydrolase; structural gen 99.39
1vjn_A220 Zn-dependent hydrolase of metallo-beta-lactamase s 99.39
3zdk_A 336 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A 99.23
2p4z_A 284 Metal-dependent hydrolases of the beta-lactamase s 99.18
3h3e_A 267 Uncharacterized protein TM1679; structural genomic 98.81
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Back     alignment and structure
Probab=99.97  E-value=7.5e-30  Score=212.21  Aligned_cols=160  Identities=83%  Similarity=1.273  Sum_probs=136.0

Q ss_pred             CcEEEEEeecCCCcEEEEEEecCCCCCcEEEEeCCCCChHHHHHHHHHcCCCccEEEcCCCCccccCChHHHHhhCCCCE
Q 027643           60 KLLFRQTFEKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVK  139 (220)
Q Consensus        60 ~l~~~~~~~~~~~~~~~li~~~~~~~~~~ilID~G~~~~~~~~~~l~~~~~~i~~I~iTH~H~DHigG~~~~~~~~p~~~  139 (220)
                      +|.+.+++....+++||+|.++...+++++|||||....+.+.+.+++.+.++++||+||.|+||++|+..|++.+++++
T Consensus         2 ~m~~~~~~~~~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~   81 (245)
T 2gcu_A            2 KLLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVK   81 (245)
T ss_dssp             CEEEEEEEETTTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCE
T ss_pred             CcEEEEeecCCCceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCe
Confidence            37788899999999999999731001579999999754678889999999999999999999999999999998778999


Q ss_pred             EEeecCCCCCCcEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEccCCCCCCCcEEEEcCccccCCcccCCCCCCCCCC
Q 027643          140 SIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKT  219 (220)
Q Consensus       140 v~~~~~~~~~~~~~~~~g~~l~lg~~~i~~~~~pGHt~gs~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~~~~~~~  219 (220)
                      |++++.........+.+|+.+.+|+.+++++++||||+|+++|++++..+.++.+++|+||++|.++++|+|++++++++
T Consensus        82 v~~~~~~~~~~~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~~~~~~~  161 (245)
T 2gcu_A           82 SVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQ  161 (245)
T ss_dssp             EEEEGGGCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSSTTCCHHH
T ss_pred             EEecccccccCCEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccCCccCCCCCCCCHHH
Confidence            99998776556778899999999999999999999999999999965211113489999999999999999999887653
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 Back     alignment and structure
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Back     alignment and structure
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Back     alignment and structure
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Back     alignment and structure
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Back     alignment and structure
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Back     alignment and structure
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Back     alignment and structure
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Back     alignment and structure
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* Back     alignment and structure
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Back     alignment and structure
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Back     alignment and structure
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Back     alignment and structure
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Back     alignment and structure
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A Back     alignment and structure
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* Back     alignment and structure
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} Back     alignment and structure
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} Back     alignment and structure
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 Back     alignment and structure
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 220
d1xm8a_ 254 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 2e-21
d1qh5a_ 260 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 2e-20
d1k07a_262 d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoriba 1e-09
d1vmea2250 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, 2e-09
d1ycga2249 d.157.1.3 (A:2-250) Nitric oxide reductase N-termi 5e-09
d2p97a1200 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 1e-08
d2aioa1266 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa 3e-08
d2gmna1264 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br 2e-07
d2q0ia1298 d.157.1.14 (A:1-298) Quinolone signal response pro 1e-05
d1znba_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi 7e-05
d1mqoa_221 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus 3e-04
d1m2xa_219 d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseob 4e-04
d1ko3a_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo 0.001
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.2 bits (215), Expect = 2e-21
 Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 12/139 (8%)

Query: 74  YTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLI-- 131
           Y Y+L D         ++DP +   +  ++ +K  G  L Y +NTH H DH  G   +  
Sbjct: 13  YAYILHD--EDTGTVGVVDPSE--AEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKD 68

Query: 132 KSKVPGVKSIISKASGSKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQP 191
           +     + S + K      D+ ++ GDK  F    + V  TPGHT G ++         P
Sbjct: 69  RYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYF------P 122

Query: 192 QPRMAFTGDALLIRGCGRT 210
             R  FTGD +    CG+ 
Sbjct: 123 GSRAIFTGDTMFSLSCGKL 141
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 260 Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Length = 262 Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250 Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249 Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Length = 200 Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266 Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264 Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298 Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230 Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221 Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Length = 219 Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Length = 230 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
d1qh5a_ 260 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.97
d1xm8a_ 254 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.97
d2qeda1 251 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.96
d2gmna1264 Zn metallo-beta-lactamase {Bradyrhizobium japonicu 99.87
d2q0ia1298 Quinolone signal response protein PqsE {Pseudomona 99.87
d2aioa1266 Zn metallo-beta-lactamase {Xanthomonas maltophilia 99.86
d1k07a_262 Zn metallo-beta-lactamase {Fluoribacter gormanii, 99.86
d1mqoa_221 Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 99.84
d1ycga2249 Nitric oxide reductase N-terminal domain {Moorella 99.83
d1e5da2249 Rubredoxin oxygen:oxidoreductase (ROO), N-terminal 99.83
d1jjta_220 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.83
d1m2xa_219 Zn metallo-beta-lactamase {Chryseobacterium mening 99.82
d1znba_230 Zn metallo-beta-lactamase {Bacteroides fragilis [T 99.81
d1x8ha_228 Zn metallo-beta-lactamase {Aeromonas hydrophila, C 99.8
d1ko3a_230 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.8
d1p9ea_294 Methyl parathion hydrolase {Pseudomonas sp. WBC-3 99.76
d1ztca1207 Hypothetical protein TM0894 {Thermotoga maritima [ 99.75
d2p97a1200 Hypothetical protein Ava3068 {Anabaena variabilis 99.74
d2cfua2 505 Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI 99.71
d2dkfa1 431 Putative RNA-degradation protein TTHA0252 {Thermus 99.7
d1vmea2250 ROO-like flavoprotein TM0755, N-terminal domain {T 99.7
d1zkpa1244 Hypothetical protein BA1088 (BAS1016) {Bacillus an 99.66
d2az4a1183 Hypothetical protein EF2904 {Enterococcus faecalis 99.65
d2i7xa1 514 Cleavage factor two protein 2, CFT2 {Baker's yeast 99.63
d1wraa1305 Teichoic acid phosphorylcholine esterase Pce (LytD 99.52
d2i7ta1 451 Cleavage and polyadenylation specificity factor su 99.51
d2cbna1 305 Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 99.39
d1y44a1 307 Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId 99.37
d1xtoa_304 Coenzyme PQQ synthesis protein B, PqqB {Pseudomona 99.08
d1vjna_209 Hypothetical protein TM0207 {Thermotoga maritima [ 98.87
d2e7ya1 280 Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax 98.85
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.6e-31  Score=217.73  Aligned_cols=145  Identities=27%  Similarity=0.435  Sum_probs=125.4

Q ss_pred             ecCCCcEEEEEEecCCCCCcEEEEeCCCCChHHHHHHHHHcCCCccEEEcCCCCccccCChHHHHhhCCCCEEEeecCCC
Q 027643           68 EKESSTYTYLLADVNHPDKPALLIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVKSIISKASG  147 (220)
Q Consensus        68 ~~~~~~~~~li~~~~~~~~~~ilID~G~~~~~~~~~~l~~~~~~i~~I~iTH~H~DHigG~~~~~~~~p~~~v~~~~~~~  147 (220)
                      +.-.+|++|+|.+..  +++++|||||.  ...+++.+++.++++.+|++||.|+||++|+..+.+.++...++......
T Consensus         7 p~l~DNy~Yli~d~~--t~~a~vIDP~~--~~~i~~~l~~~~~~l~~Il~TH~H~DHi~g~~~l~~~~~~~~~~~~~~~~   82 (260)
T d1qh5a_           7 PALTDNYMYLVIDDE--TKEAAIVDPVQ--PQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRI   82 (260)
T ss_dssp             EETTTEEEEEEEETT--TTEEEEESCSS--HHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTTS
T ss_pred             eeecceEEEEEEECC--CCEEEEEeCCC--CHHHHHHHHHCCCeEEEEEcCCCChhhhccchhhhccccCcccccccccc
Confidence            445778899999853  57899999985  78899999999999999999999999999999999999777777777777


Q ss_pred             CCCcEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEccCCCCCCCcEEEEcCccccCCcccCCCCCCCCCC
Q 027643          148 SKADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQVLGLKT  219 (220)
Q Consensus       148 ~~~~~~~~~g~~l~lg~~~i~~~~~pGHt~gs~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~~~~~~~  219 (220)
                      ......+.+|+.+.+|+.+++++++||||+||+||++++. .....+++||||++|.+||||+  ++|++++
T Consensus        83 ~~~~~~~~~gd~~~~g~~~~~vi~TPGHT~gsv~~~~~~~-~~~~~~~lFtGDtLF~gg~Gr~--~~g~~~~  151 (260)
T d1qh5a_          83 GALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKP-GGSEPPAVFTGDTLFVAGCGKF--YEGTADE  151 (260)
T ss_dssp             TTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECS-SSSSCCEEEEETTEETTEECCC--TTCCHHH
T ss_pred             ccccccccccccceeeeeeeEEEEecCCCCccEEEEEcCC-CCcccceEEecCccccCccccc--ccCchHH
Confidence            7778899999999999999999999999999999999752 0123569999999999999997  4677654
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Back     information, alignment and structure
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Back     information, alignment and structure
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure