Citrus Sinensis ID: 027713

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
MEVSLLSLSSSQNLTLKPSTNPLFHFHPSKRSKPPPTHIRAAISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGSAIGLVGTLQAPARDLLMVLKAYAKKLEDESGQ
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHcccccEEEEEccHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEEEEccCEccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
***************LKPSTNP************************KKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGSAIGLVGTLQAPARDLLMVLKAYA*********
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MEVSLLSLSSSQNLTLKPSTNPLFHFHPSKRSKPPPTHIRAAISRTKKEETVDTVKTHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGSAIGLVGTLQAPARDLLMVLKAYAKKLEDESGQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
50S ribosomal protein L10, chloroplastic This protein binds directly to 23S ribosomal RNA.confidentQ9FY50
50S ribosomal protein L10, chloroplastic This protein binds directly to 23S ribosomal RNA.probableO80362

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZAV, chain A
Confidence level:very confident
Coverage over the Query: 42-214
View the alignment between query and template
View the model in PyMOL