Citrus Sinensis ID: 027867

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
Protein Sequence
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Secondary Structure (PSIPRED)
ccccccccccccccEEEHHHHHcccccccEEEEEEEccccccEEEEEEEEEEcccccHHHHccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccEEEEccEEEEcccccccccEEEEccccccccHHEEEEcccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHccccccccccEEEccEEEEccccccccEcEEEEEHHHHEEEcccccccccHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHH
Coil and Loop (DISEMBL)
mdiekpsnktagkpiqcraaiatapgeplvidevivdppnsheVRVRIICTSLChsdvtfwkmkdfpavfprilgHEAIGVVEsvgenvdgvvegdvviphfladctecvgcrskkgnlcsafpfkispwmprdqtsrfkdlrgetihhfvsvssfseytvLDIAHvvkvdptvppnracllscgvstgvgAAWRTANVEVGSTVVIFGLGSIGLAV
Flexible Loop (DISEMBL)
mdiekpsnktagkpiqCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSafpfkispwmprdQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGlgsiglav
Low Complexity Region (SEG)
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIgvvesvgenvdgvvegdvvIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Disordered region (IsUnstruct)
***************QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL**
Disordered Region (DISOPRED)
***************QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Disordered Region (DISEMBL)
************KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Disordered Region (DISPRO)
***********GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	217	2.2.26 [Sep-21-2011]
Q9FH04	390	Alcohol dehydrogenase-lik	yes	no	0.967	0.538	0.720	5e-87
Q9SK87	386	Alcohol dehydrogenase-lik	no	no	0.958	0.538	0.619	4e-70
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.949	0.530	0.610	3e-69
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.949	0.529	0.605	3e-68
P48977	380	Alcohol dehydrogenase OS=	N/A	no	0.958	0.547	0.490	7e-54
Q96533	379	Alcohol dehydrogenase cla	no	no	0.940	0.538	0.523	1e-53
Q8VZ49	380	Alcohol dehydrogenase-lik	no	no	0.944	0.539	0.509	3e-53
P10848	379	Alcohol dehydrogenase 3 O	N/A	no	0.949	0.543	0.509	4e-53
P04707	379	Alcohol dehydrogenase 2 O	N/A	no	0.949	0.543	0.504	5e-53
A1L4Y2	394	Alcohol dehydrogenase-lik	no	no	0.963	0.530	0.502	6e-53

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  320 bits (820), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 152/211 (72%), Positives = 181/211 (85%), Gaps = 1/211 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           STGVGAAW TA VE GSTVVIFGLGSIGLAV
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAV 220

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  264 bits (674), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/210 (61%), Positives = 161/210 (76%), Gaps = 2/210 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A 68
           T GKPI+C+AAI    GEPLVI+E+ VDPP ++EVR++I+CTSLCH+DVTFWK+   P A
Sbjct: 7   TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLA 66

Query: 69  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-I 127
            FPRILGHEA+GVVES+GE VDG  +GDVV+P F   C EC  C S K N C+ +    +
Sbjct: 67  RFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYL 126

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V+
Sbjct: 127 SNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVA 186

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           TG+GAAW+ A+VE GSTVVIFGLG++GLAV
Sbjct: 187 TGLGAAWKVADVEEGSTVVIFGLGAVGLAV 216

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  261 bits (666), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 127/208 (61%), Positives = 158/208 (75%), Gaps = 2/208 (0%)

Query: 12  GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
           GKPI C+AAI    GE LVI+++ VDPP ++EVR++I+CTSLCH+D+TFWK+   P + F
Sbjct: 11  GKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRF 70

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
           PRILGHEA+GVVES+GENVDG  +GDVV+P F   C EC  C+S K N C  +    IS 
Sbjct: 71  PRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISN 130

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                  SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct: 131 TRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTG 190

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           +GAAW+ ANVE GST+ IFGLG++GLAV
Sbjct: 191 IGAAWKVANVEEGSTIAIFGLGAVGLAV 218

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  257 bits (657), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 126/208 (60%), Positives = 162/208 (77%), Gaps = 2/208 (0%)

Query: 12  GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
           GKPI+C+AA++  PGE LVI+E+ VDPP ++EVR++IICTSLCH+DV+F K+   P A F
Sbjct: 12  GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
           PRILGHEA+GV+ES+GE+V+G  +GDVV+P F   C EC  C+S K N C+ F    +S 
Sbjct: 72  PRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSN 131

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                 TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct: 132 TRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTG 191

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           +GAAW+ ANVE GSTV +FGLG++GLAV
Sbjct: 192 IGAAWKVANVEKGSTVAVFGLGAVGLAV 219

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  210 bits (534), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 103/210 (49%), Positives = 145/210 (69%), Gaps = 2/210 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           + TAG+ I+CRAA+A   G+PLVI+EV V PP ++EVR++I+ TSLCH+DV FW+ K   
Sbjct: 2   SNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQN 61

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
            +FPRI GHEA G+VESVGE V  +  GD V+P F  +C +C  C+S++ N+C       
Sbjct: 62  PLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINT 121

Query: 128 SPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
               M  D  SRF  ++G+ I+HFV  S+FSEYTV+ +  + K++P+ P ++ CLLSCG+
Sbjct: 122 DRGVMLSDGKSRF-SIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGI 180

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           STG+GA    A  + GSTV +FGLG++GLA
Sbjct: 181 STGLGATLNVAKPKKGSTVAVFGLGAVGLA 210

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  209 bits (532), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/212 (52%), Positives = 142/212 (66%), Gaps = 8/212 (3%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T G+ I C+AA+A  P +PLVI++V V PP + EVR++I+ T+LCH+D   W  KD   +
Sbjct: 3   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 62

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC----SAFPF 125
           FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC    SA   
Sbjct: 63  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 122

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL CG
Sbjct: 123 GI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCG 178

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V TG+GA W TA VE GS V IFGLG++GLAV
Sbjct: 179 VPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAV 210

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q8VZ49|ADHL4_ARATH Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1

 Score =  208 bits (529), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 110/216 (50%), Positives = 149/216 (68%), Gaps = 11/216 (5%)

Query: 9   KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFP 67
           +T GK I C+AA+A   GEPLV+++V VDPP   EVR+RI+ TS+CH+D++ WK + +  
Sbjct: 2   ETQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQ 61

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
             +PRILGHEA G+VESVGE V+ ++ GD V+P F  +C +C  C+    NLC  F  ++
Sbjct: 62  RAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERF--RV 119

Query: 128 SPW---MPRDQTSRF---KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL 181
            P    M  D  +RF   KD   + I+HF++ S+FSEYTV+D A V+KVDP  P  +  L
Sbjct: 120 DPMKKVMVTDGKTRFFTSKD--NKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISL 177

Query: 182 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           LSCGVSTGVGAAW  A+++  STV IFGLG++GLAV
Sbjct: 178 LSCGVSTGVGAAWNVADIQPASTVAIFGLGAVGLAV 213

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P10848|ADH3_HORVU Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1

 Score =  207 bits (527), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 142/208 (68%), Gaps = 2/208 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+A   G+PL I+EV V PP + EVRV+I+ T+LCH+DV FW+ K    V
Sbjct: 3   TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPV 62

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FPRILGHEA G+VESVGE V  +V GD V+P F  +C +C  C+S++ NLC      +  
Sbjct: 63  FPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDR 122

Query: 130 W-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
             M  D  SRF  + G+ I HFV  S+FSEYTV+ +  + K++P  P ++ C+LSCG+ST
Sbjct: 123 GVMIGDGQSRFT-INGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLST 181

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           G+GA    A  + GSTV IFGLG++GLA
Sbjct: 182 GLGATLNVAKPKKGSTVAIFGLGAVGLA 209

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P04707|ADH2_MAIZE Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1

 Score =  207 bits (527), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 139/208 (66%), Gaps = 2/208 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+CRAA+    G+PL I+EV V PP + EVR++I+ T+LCH+DV FW+ K    V
Sbjct: 3   TAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPV 62

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FPRILGHEA G+VESVGE V  V  GD V+P F  +C EC  C+S++ N+C      +  
Sbjct: 63  FPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDR 122

Query: 130 W-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
             M  D  SRF  + G+ I HFV  S+FSEYTV+ +  + K++P  P ++ C+LSCG+ST
Sbjct: 123 GVMIGDGKSRFT-ISGQPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGIST 181

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           G+GA    A    GSTV IFGLG++GLA
Sbjct: 182 GLGATLNVAKPAKGSTVAIFGLGAVGLA 209

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A1L4Y2|ADHL3_ARATH Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1

 Score =  207 bits (526), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 143/219 (65%), Gaps = 10/219 (4%)

Query: 9   KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFP 67
           +T GK I C+AA+   P  PLVI E+ VDPP   EVRV+I+ +S+CH+D+  W    +  
Sbjct: 3   ETQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAE 62

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK- 126
             FPRILGHEA+G+VESVGE V  V EGD VIP F  +C EC  C+ ++ NLC  +    
Sbjct: 63  RAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDP 122

Query: 127 ISPWMPRDQTSRF-----KD---LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178
           +   M  D  +RF     KD    + + I+HF++ S+F+EYTVLD A VVK+DP  P  +
Sbjct: 123 MKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQ 182

Query: 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             LLSCGVSTGVGAAW  ANV+ G +  +FGLGS+GLAV
Sbjct: 183 MSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAV 221

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	217
255539138	386	alcohol dehydrogenase, putative [Ricinus	0.958	0.538	0.745	2e-90
225459818	384	PREDICTED: alcohol dehydrogenase-like 7	0.972	0.549	0.710	1e-86
224065707	398	predicted protein [Populus trichocarpa]	0.995	0.542	0.769	3e-86
297795321	390	hypothetical protein ARALYDRAFT_494804 [	0.967	0.538	0.710	9e-86
359492331	395	PREDICTED: alcohol dehydrogenase-like 7-	0.967	0.531	0.7	2e-85
7705214	389	alcohol dehydrogenase ADH [Solanum lycop	1.0	0.557	0.691	2e-85
356554319	387	PREDICTED: alcohol dehydrogenase-like 7-	0.986	0.552	0.705	3e-85
15238330	390	alcohol dehydrogenase-like 7 [Arabidopsi	0.967	0.538	0.720	3e-85
356554321	388	PREDICTED: alcohol dehydrogenase-like 7-	1.0	0.559	0.700	3e-85
7705215	390	alcohol dehydrogenase ADH [Solanum lycop	0.967	0.538	0.704	7e-85

>gi|255539138|ref|XP_002510634.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223551335|gb|EEF52821.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 155/208 (74%), Positives = 180/208 (86%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           + G PI+C+AA+   PGEPLVI+E++V PPN HEVR++IICTSLC SD+TFW++KDFPAV
Sbjct: 8   SVGTPIRCKAAVCRKPGEPLVIEEILVAPPNRHEVRIQIICTSLCQSDITFWRLKDFPAV 67

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FPRILGHEA+GVVESVGE+V    EGD VIP FL DC +C  C SKK NLCS  PFK+SP
Sbjct: 68  FPRILGHEAVGVVESVGEDVKEFKEGDTVIPTFLPDCGDCTDCISKKSNLCSKLPFKVSP 127

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
           WMPR +TSRF DL GE ++HF+SVSSFS+YTV+DIAH+ KVDP++PPNRACLLSCGVSTG
Sbjct: 128 WMPRYETSRFTDLNGEALYHFLSVSSFSQYTVIDIAHLTKVDPSIPPNRACLLSCGVSTG 187

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           VGAAWRTANVE GSTVVIFGLGSIGLAV
Sbjct: 188 VGAAWRTANVEAGSTVVIFGLGSIGLAV 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459818|ref|XP_002285916.1| PREDICTED: alcohol dehydrogenase-like 7 [Vitis vinifera] gi|302141683|emb|CBI18886.3| unnamed protein product [Vitis vinifera]

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/211 (71%), Positives = 180/211 (85%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           + +T GKPI+CRAA+    GEPLV++EV+V PP + EVR+RIICTSLC+SD+TFWK+KD 
Sbjct: 3   AGETRGKPIRCRAAVCWKAGEPLVMEEVMVAPPLAGEVRIRIICTSLCYSDITFWKLKDP 62

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
           P  FPRILGHEA+GVVESVGENV  V EGD+V+P FL DC EC  CRS+K NLCS FPFK
Sbjct: 63  PGCFPRILGHEAVGVVESVGENVSEVTEGDIVLPIFLPDCGECTDCRSEKSNLCSKFPFK 122

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           +SPWMPR ++SRF DL+GE ++HF+ VSSFSEYTV+DIA++ K+DP +PPNRACL SCGV
Sbjct: 123 VSPWMPRYESSRFTDLKGEVLYHFLFVSSFSEYTVVDIANITKIDPNIPPNRACLFSCGV 182

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           STGVGAAW+TANVE GSTV IFGLG+IGLAV
Sbjct: 183 STGVGAAWKTANVEKGSTVAIFGLGAIGLAV 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065707|ref|XP_002301931.1| predicted protein [Populus trichocarpa] gi|222843657|gb|EEE81204.1| predicted protein [Populus trichocarpa]

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 193/217 (88%), Gaps = 1/217 (0%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           MD EK S + AGKPI C+AA+A  PGEPLVI+E+IV PP+ HEVRVRIICTSLC SDVTF
Sbjct: 1   MDGEKFSVE-AGKPILCKAAVARKPGEPLVIEEIIVAPPSHHEVRVRIICTSLCQSDVTF 59

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           WK+KD PAVFPRILGHEAIGVVESVGE+VD VVEGDVVIP FL DC +C  C+SKK NLC
Sbjct: 60  WKLKDLPAVFPRILGHEAIGVVESVGEDVDEVVEGDVVIPVFLPDCGDCADCKSKKSNLC 119

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
           S  PF++SPWMPRD+TSRF +L+GE ++HF++VSSFSEYTV+D AH+VK+DP++PP++AC
Sbjct: 120 SKLPFQVSPWMPRDKTSRFTNLKGEVLYHFLNVSSFSEYTVVDTAHIVKIDPSIPPSKAC 179

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           LLSCGVSTGVGAAWRTANVE GSTVVIFGLGSIGLAV
Sbjct: 180 LLSCGVSTGVGAAWRTANVEAGSTVVIFGLGSIGLAV 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795321|ref|XP_002865545.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata] gi|297311380|gb|EFH41804.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata]

 Score =  322 bits (824), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 150/211 (71%), Positives = 183/211 (86%), Gaps = 1/211 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP  +EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSRKPIRCKAAVSRKAGEPLVMEEIMVAPPQPYEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC ECV C+S+K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGECVDCKSQKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR + +SRF DL G+T+ HF++VSSFSEYTVLD+A++VK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYENSSRFTDLNGQTLFHFLNVSSFSEYTVLDVANIVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           STGVGAAW TA VE GSTVVIFGLGSIGLAV
Sbjct: 190 STGVGAAWETAKVEQGSTVVIFGLGSIGLAV 220

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492331|ref|XP_002285917.2| PREDICTED: alcohol dehydrogenase-like 7-like [Vitis vinifera] gi|302141684|emb|CBI18887.3| unnamed protein product [Vitis vinifera]

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/210 (70%), Positives = 181/210 (86%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           ++T GKPI+CRAA++   GEPLV++EV+V PP + EVR+RIICTSLCHSD+TFWK+K+ P
Sbjct: 15  SQTRGKPIRCRAAVSRKAGEPLVMEEVMVAPPMAGEVRIRIICTSLCHSDLTFWKLKEPP 74

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEA+GVVESVGENV  V EGD V+P F+ DC EC+ CRS+K NLCS FPF+I
Sbjct: 75  ACFPRILGHEAVGVVESVGENVTEVAEGDTVLPIFIPDCGECMDCRSEKSNLCSKFPFEI 134

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           SPW+PR ++SRF DL+GE ++HF++VSSFSEYTV+DI ++ K+ P +PPN+ACL SCGVS
Sbjct: 135 SPWLPRHKSSRFTDLKGEVLYHFLNVSSFSEYTVVDIDNITKISPAIPPNKACLFSCGVS 194

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           TGVGAAWRTA VE GSTVVIFGLG+IGLAV
Sbjct: 195 TGVGAAWRTAKVEKGSTVVIFGLGAIGLAV 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7705214|gb|AAB33480.2| alcohol dehydrogenase ADH [Solanum lycopersicum]

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/217 (69%), Positives = 179/217 (82%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           M   K     AGKPI+C+AA+A   GEPLVI+EVIV PP +HEVRV+IICTSLCH+D+T 
Sbjct: 1   MASTKQYFSAAGKPIRCKAAVARKAGEPLVIEEVIVAPPKAHEVRVKIICTSLCHTDITL 60

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           WK+K+FP  FPRILGHEA GVVESVGE+VD + EGD V+P FL DC +CV C+SKK NLC
Sbjct: 61  WKLKEFPGCFPRILGHEAFGVVESVGEDVDELKEGDSVVPIFLPDCMDCVDCKSKKSNLC 120

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
           S FP ++SP + R+ TSRF +  GET+HHF+ +SSFSEYTV+D+ +V K+DP +PPNRAC
Sbjct: 121 SKFPIQVSPLLHRNDTSRFSNAAGETLHHFLYISSFSEYTVVDVVNVTKIDPEIPPNRAC 180

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           LLSCGVSTGVGAAW+TANVE GSTVVIFGLGSIGLAV
Sbjct: 181 LLSCGVSTGVGAAWKTANVEPGSTVVIFGLGSIGLAV 217

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554319|ref|XP_003545495.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max]

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 178/214 (83%)

Query: 4   EKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM 63
           +K +  + G+PI+C+AAI   PG PL I+E+IV PP   E R+R+ICTSLCHSDVTFWKM
Sbjct: 3   DKLATTSEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTFWKM 62

Query: 64  KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAF 123
           +  PA+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLCS F
Sbjct: 63  EVPPAICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKF 122

Query: 124 PFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 183
           PF++SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRACLLS
Sbjct: 123 PFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRACLLS 182

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           CGVSTGVGAAWRTA VE GSTVVIFGLGSIGLAV
Sbjct: 183 CGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAV 216

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238330|ref|NP_199040.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana] gi|75333830|sp|Q9FH04.1|ADHL7_ARATH RecName: Full=Alcohol dehydrogenase-like 7 gi|10177010|dbj|BAB10198.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|19698971|gb|AAL91221.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|22136298|gb|AAM91227.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|332007405|gb|AED94788.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana]

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/211 (72%), Positives = 181/211 (85%), Gaps = 1/211 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           STGVGAAW TA VE GSTVVIFGLGSIGLAV
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAV 220

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554321|ref|XP_003545496.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 2 [Glycine max]

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/217 (70%), Positives = 178/217 (82%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           M  +  S+   G+PI+C+AAI   PG PL I+E+IV PP   E R+R+ICTSLCHSDVTF
Sbjct: 1   MASQNSSSLCEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTF 60

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           WKM+  PA+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLC
Sbjct: 61  WKMEVPPAICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLC 120

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
           S FPF++SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRAC
Sbjct: 121 SKFPFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRAC 180

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           LLSCGVSTGVGAAWRTA VE GSTVVIFGLGSIGLAV
Sbjct: 181 LLSCGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAV 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7705215|gb|AAB33481.2| alcohol dehydrogenase ADH [Solanum lycopersicum]

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 148/210 (70%), Positives = 178/210 (84%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           +KTAGKPI+CRAA+A   GEPLVI+EVIV PP +HEVR++IICTSLCH+D+T WK+K+FP
Sbjct: 10  SKTAGKPIRCRAAVARKAGEPLVIEEVIVAPPKAHEVRLKIICTSLCHTDITLWKLKEFP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
             FPRILGHEA GVVESVGE+VD + EGD V+P FL DC +CV C+SKK NLCS FP + 
Sbjct: 70  GCFPRILGHEAFGVVESVGEDVDHLKEGDSVVPIFLPDCMDCVDCKSKKSNLCSKFPIQS 129

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           S  + RD TSRF +  GET+HH++ +SSFSEYTV+D+ +V K+DP +PPNRACLLSCGVS
Sbjct: 130 SLLLHRDDTSRFTNADGETLHHYLYISSFSEYTVVDVVNVTKIDPEIPPNRACLLSCGVS 189

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           TGVGAAW+TANVE GSTVVIFGLGS+GLAV
Sbjct: 190 TGVGAAWKTANVEPGSTVVIFGLGSVGLAV 219

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	217
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.967	0.538	0.644	5.9e-73
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.958	0.538	0.552	1.4e-57
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.949	0.529	0.548	1.2e-56
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.949	0.530	0.538	4.2e-56
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.963	0.530	0.442	2.8e-43
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.917	0.522	0.433	7.3e-43
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.944	0.540	0.425	2.5e-42
SGD|S000002327	386	SFA1 "Bifunctional alcohol deh	0.972	0.546	0.421	3.6e-41
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.953	0.550	0.432	5.9e-41
UNIPROTKB|F1NI89	370	ADH5 "Uncharacterized protein"	0.926	0.543	0.435	9.6e-41

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 136/211 (64%), Positives = 165/211 (78%)

Query:     8 NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
             NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct:    10 NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query:    68 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
             A FPRILGHEAI                   +P F+ DC +CV C+S K NLCS FPFK+
Sbjct:    70 ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query:   128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
             SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct:   130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query:   187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             STGVGAAW TA VE GSTVVIFGLGSIGLAV
Sbjct:   190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAV 220

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 116/210 (55%), Positives = 145/210 (69%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A 68
             T GKPI+C+AAI    GEPLVI+E+ VDPP ++EVR++I+CTSLCH+DVTFWK+   P A
Sbjct:     7 TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLA 66

Query:    69 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-I 127
              FPRILGHEA+                   +P F   C EC  C S K N C+ +    +
Sbjct:    67 RFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYL 126

Query:   128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
             S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V+
Sbjct:   127 SNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVA 186

Query:   188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             TG+GAAW+ A+VE GSTVVIFGLG++GLAV
Sbjct:   187 TGLGAAWKVADVEEGSTVVIFGLGAVGLAV 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 114/208 (54%), Positives = 145/208 (69%)

Query:    12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
             GKPI+C+AA++  PGE LVI+E+ VDPP ++EVR++IICTSLCH+DV+F K+   P A F
Sbjct:    12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71

Query:    71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
             PRILGHEA+                   +P F   C EC  C+S K N C+ F    +S 
Sbjct:    72 PRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSN 131

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                   TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct:   132 TRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTG 191

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             +GAAW+ ANVE GSTV +FGLG++GLAV
Sbjct:   192 IGAAWKVANVEKGSTVAVFGLGAVGLAV 219

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 112/208 (53%), Positives = 141/208 (67%)

Query:    12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
             GKPI C+AAI    GE LVI+++ VDPP ++EVR++I+CTSLCH+D+TFWK+   P + F
Sbjct:    11 GKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRF 70

Query:    71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
             PRILGHEA+                   +P F   C EC  C+S K N C  +    IS 
Sbjct:    71 PRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISN 130

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                    SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct:   131 TRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTG 190

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             +GAAW+ ANVE GST+ IFGLG++GLAV
Sbjct:   191 IGAAWKVANVEEGSTIAIFGLGAVGLAV 218

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 97/219 (44%), Positives = 130/219 (59%)

Query:     9 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFP 67
             +T GK I C+AA+   P  PLVI E+ VDPP   EVRV+I+ +S+CH+D+  W    +  
Sbjct:     3 ETQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAE 62

Query:    68 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF---P 124
               FPRILGHEA+                   IP F  +C EC  C+ ++ NLC  +   P
Sbjct:    63 RAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDP 122

Query:   125 FK---ISPWMPRDQTSRFKD---LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178
              K   ++    R  T+  KD    + + I+HF++ S+F+EYTVLD A VVK+DP  P  +
Sbjct:   123 MKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQ 182

Query:   179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
               LLSCGVSTGVGAAW  ANV+ G +  +FGLGS+GLAV
Sbjct:   183 MSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAV 221

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 88/203 (43%), Positives = 125/203 (61%)

Query:    15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
             I C AA+A   GEPLV++EV V PP   E+R++++CTSLC SD++ W+ +   ++ PRI 
Sbjct:    14 ITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQ---SLLPRIF 70

Query:    75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             GHEA                    +  F  +C  C  C S K N+C     +    M  D
Sbjct:    71 GHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSD 130

Query:   135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
             Q +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSCGV+ G+GAAW
Sbjct:   131 QKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 189

Query:   195 RTANVEVGSTVVIFGLGSIGLAV 217
               A+V+ GS+VVIFGLG++GL+V
Sbjct:   190 NVADVQKGSSVVIFGLGTVGLSV 212

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 88/207 (42%), Positives = 123/207 (59%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
             T G+ I+C+AA+A   G+PLVI+EV V PP  HEVR++I+ TSLCH+DV FW+ K    +
Sbjct:     3 TTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPL 62

Query:    70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
             FPRI GHEA                    +P F  +C EC  C S++ N+C         
Sbjct:    63 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTER 122

Query:   130 W-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
               M  D  SRF  + G+ I+HF+  S+FSEYTV+    V K++P  P ++ C++SCG+ST
Sbjct:   123 GGMIHDGESRFS-INGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

Query:   189 GVGAAWRTANVEVGSTVVIFGLGSIGL 215
             G+GA    A  + G +V IFGLG++GL
Sbjct:   182 GLGATLNVAKPKKGQSVAIFGLGAVGL 208

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

SGD|S000002327 SFA1 "Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 89/211 (42%), Positives = 123/211 (58%)

Query:     7 SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
             S  T GKPI+C AA+A    +PL ++E+ VD P +HEVR++I  T++CH+D       D 
Sbjct:     2 SAATVGKPIKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDP 61

Query:    67 PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
               +FP +LGHE                     I  + A+C +C  C S K NLC A    
Sbjct:    62 EGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRAT 121

Query:   127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                 +  D T+RF + +GE I+HF+  S+FSEYTV+    VV +DP  P + ACLL CGV
Sbjct:   122 QGKGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGV 181

Query:   187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             +TG GAA +TANV+ G TV +FG G++GL+V
Sbjct:   182 TTGFGAALKTANVQKGDTVAVFGCGTVGLSV 212

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;IMP;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0033833 "hydroxymethylfurfural reductase (NADH) activity" evidence=IMP

GO:0033859 "furaldehyde metabolic process" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0000947 "amino acid catabolic process to alcohol via Ehrlich pathway" evidence=IGI

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0046294 "formaldehyde catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;IDA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 90/208 (43%), Positives = 118/208 (56%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
             T GK I+C+AA+A   G+PL I+EV V PP +HEVRV+I  T +CH+D       D   +
Sbjct:     3 TTGKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGL 62

Query:    70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
             FP ILGHE                     IP ++  C EC  C++ K NLC         
Sbjct:    63 FPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQ 122

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +  D TSRF   +G+ + HF+  S+FSEYTV+    + KVD   P ++ CLL CG+STG
Sbjct:   123 GLMPDNTSRFT-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTG 181

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
              GAA  TA VE GST  +FGLG++GLAV
Sbjct:   182 YGAAINTAKVEAGSTCAVFGLGAVGLAV 209

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 88/202 (43%), Positives = 116/202 (57%)

Query:    15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
             I+C+AA+A   G+PL I+EV V PP +HEVR++I+ T+LCH+D       D    FP IL
Sbjct:     2 IKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVIL 61

Query:    75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             GHE                     IP ++  C EC  C++ K NLC    F     +  D
Sbjct:    62 GHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKGLMPD 121

Query:   135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
              T RF   +G+ I+HF+  S+FSEYTV+    V K+DP  P ++ CLL CG+STG GAA 
Sbjct:   122 GTIRFT-CKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAV 180

Query:   195 RTANVEVGSTVVIFGLGSIGLA 216
              TA VE GST  +FGLG +GLA
Sbjct:   181 NTAKVEPGSTCAVFGLGGVGLA 202

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FH04	ADHL7_ARATH	1, ., 1, ., 1, ., 1	0.7203	0.9677	0.5384	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_II0121	hypothetical protein (398 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XI.3391.1	pyruvate decarboxylase (EC-4.1.1.1) (574 aa)						•			0.899
	gw1.V.2645.1	hypothetical protein (479 aa)						•			0.899
	gw1.III.2325.1	SubName- Full=Putative uncharacterized protein; (514 aa)						•			0.899
	gw1.4555.2.1	annotation not avaliable (88 aa)						•			0.899
	gw1.134.62.1	hypothetical protein (453 aa)						•			0.899
	grail3.0005008802	aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa)						•			0.899
	fgenesh4_pg.C_LG_II000742	hypothetical protein (480 aa)						•			0.899
	eugene3.01840014	pyruvate decarboxylase (549 aa)						•			0.899
	eugene3.00060891	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVI0442	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	217
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-108
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-88
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	3e-86
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	3e-83
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	6e-74
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-72
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-68
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	7e-67
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-66
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-62
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-52
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	6e-49
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	7e-44
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-34
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-33
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-31
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-31
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-25
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-25
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	9e-25
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-24
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-23
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-23
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-23
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-22
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-22
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	5e-21
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	7e-21
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-20
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-20
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-20
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-20
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-20
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	5e-19
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-18
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	6e-18
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	9e-18
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-17
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-17
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-16
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	5e-16
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-15
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-15
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-15
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-14
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-14
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	6e-14
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-13
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-13
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	7e-13
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-12
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-12
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	4e-12
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-12
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	1e-11
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	1e-11
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-11
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	6e-11
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	6e-11
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	9e-11
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	3e-10
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	3e-10
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-09
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-09
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-08
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-08
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	3e-08
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-07
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-07
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-07
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-07
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-07
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-07
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	8e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-06
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-06
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-06
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	5e-06
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-05
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-05
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	1e-04
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-04
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	2e-04
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	3e-04
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-04
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	0.001
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	0.001
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	0.001
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	0.001
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	0.002
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	0.002
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	0.004

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  316 bits (811), Expect = e-108
 Identities = 109/204 (53%), Positives = 140/204 (68%), Gaps = 2/204 (0%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I C+AA+A   G+PLVI+EV V PP + EVR++I+ TSLCH+DV FW+ K    +FPRIL
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPR 133
           GHEA G+VESVGE V  +  GD V+P F  +C EC  C+S+K N+C           M  
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
           D  SRF    G+ I+HFV  S+FSEYTV+ +  V K++P  P ++ CLLSCGVSTG+GAA
Sbjct: 121 DGKSRFSI-NGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAA 179

Query: 194 WRTANVEVGSTVVIFGLGSIGLAV 217
           W  A V+ GSTV IFGLG++GLAV
Sbjct: 180 WNVAKVKKGSTVAIFGLGAVGLAV 203

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  264 bits (678), Expect = 1e-88
 Identities = 103/203 (50%), Positives = 137/203 (67%), Gaps = 3/203 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I+C+AA+A   G+PLVI+E+ V PP ++EVR++++ TS+CH+D+   +      +FP IL
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF-KATLFPVIL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G+VESVGE V  +  GD VIP F+  C EC  CRS K NLC  +    S  MP D
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMP-D 118

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            TSRF   +G+ I+HF+  S+FS+YTV+D  +V K+DP  P    CLL CG STG GAAW
Sbjct: 119 GTSRFT-CKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAW 177

Query: 195 RTANVEVGSTVVIFGLGSIGLAV 217
            TA VE GSTV +FGLG++GL+ 
Sbjct: 178 NTAKVEPGSTVAVFGLGAVGLSA 200

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  259 bits (664), Expect = 3e-86
 Identities = 115/213 (53%), Positives = 149/213 (69%), Gaps = 7/213 (3%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPA 68
           T GK I C+AA+A  PGEPLV++E+ VDPP   EVR++I+ TS+CH+D++ WK   +   
Sbjct: 4   TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR 63

Query: 69  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAF---PF 125
            +PRILGHEA G+VESVGE V+ +  GD VIP F  +C +C  C+  K NLC  +   PF
Sbjct: 64  AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPF 123

Query: 126 KISPWMPRDQTSRFKDLR-GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 184
           K    M  D  +RF     G+ I+HF++ S+F+EYTVLD A VVK+DP  P  +  LLSC
Sbjct: 124 KSV--MVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSC 181

Query: 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           GVSTGVGAAW TANV+ GS+V IFGLG++GLAV
Sbjct: 182 GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAV 214

Length = 381

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  251 bits (643), Expect = 3e-83
 Identities = 104/209 (49%), Positives = 135/209 (64%), Gaps = 13/209 (6%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I C+AA+A   G+PL I+EV V PP + EVR++I+ T +CH+D       D   +FP IL
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW---- 130
           GHE  G+VESVGE V  V  GD VIP +  +C EC  C+S K NLC     KI       
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQ----KIRATQGKG 116

Query: 131 -MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL-DIAHVVKVDPTVPPNRACLLSCGVST 188
            MP D TSRF   +G+ I+HF+  S+FSEYTV+ +I+ V K++P  P ++ CLL CGV+T
Sbjct: 117 LMP-DGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEIS-VAKINPEAPLDKVCLLGCGVTT 173

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           G GA   TA VE GSTV +FGLG++GLAV
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAV 202

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  227 bits (581), Expect = 6e-74
 Identities = 98/208 (47%), Positives = 127/208 (61%), Gaps = 2/208 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+   P +P  I+E+ V PP +HEVR++I+ T +C SD      K     
Sbjct: 1   TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGK-LVTP 59

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA G+VESVGE V  V  GD VIP F+  C +C  C + + NLC         
Sbjct: 60  FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            + +D TSRF   +G+ IHHF+  S+FSEYTV+D   V K+D   P  + CL+ CG STG
Sbjct: 120 GLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTG 178

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA  TA V  GST  +FGLG +GL+ 
Sbjct: 179 YGAAVNTAKVTPGSTCAVFGLGGVGLSA 206

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  223 bits (570), Expect = 3e-72
 Identities = 99/203 (48%), Positives = 137/203 (67%), Gaps = 4/203 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I CRAA+A   GE LV++EV V PP   E+R++++ TSLC SD++ W+ +   A+FPRI 
Sbjct: 11  ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIF 67

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHEA G+VES+GE V    +GD V+  F  +C  C  C S K N+C     +    M  D
Sbjct: 68  GHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSD 127

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
           Q +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSCGV+ G+GAAW
Sbjct: 128 QKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 186

Query: 195 RTANVEVGSTVVIFGLGSIGLAV 217
             A+V  GS+VVIFGLG++GL+V
Sbjct: 187 NVADVSKGSSVVIFGLGTVGLSV 209

Length = 378

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  214 bits (546), Expect = 1e-68
 Identities = 93/203 (45%), Positives = 122/203 (60%), Gaps = 2/203 (0%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           ++ RAA+A   G+PL I+EV +DPP + EV VRI  T +CH+D       D P  FP +L
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDD-PEGFPAVL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G+VE+VGE V  V  GD VI  F  +C +C  C S K NLC A           D
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPD 119

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            T+R     G  ++H++  S+F+EYTV+    +VK+DP  P  +ACLL CGV+TG+GA  
Sbjct: 120 GTTRLSG-NGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 195 RTANVEVGSTVVIFGLGSIGLAV 217
            TA VE G TV +FGLG +GLA 
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAA 201

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  209 bits (534), Expect = 7e-67
 Identities = 89/202 (44%), Positives = 122/202 (60%), Gaps = 4/202 (1%)

Query: 17  CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           C+AA+    G+PL I+E+ V PP + EVR++++ T +CH+D+     K  P   P ILGH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGH 59

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS-AFPFKISPWMPRDQ 135
           E  G+VES+G  V  +  GD VIP F   C +C  C + + NLCS +        M  D 
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DG 118

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
           TSRF   +G+ IHHF+  S+F+EYTV+    + K+DP  P  + CL+ CG STG GAA  
Sbjct: 119 TSRFT-CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN 177

Query: 196 TANVEVGSTVVIFGLGSIGLAV 217
           TA V  GST  +FGLG +GL+V
Sbjct: 178 TAKVTPGSTCAVFGLGGVGLSV 199

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  207 bits (530), Expect = 3e-66
 Identities = 87/200 (43%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+    G+PL I+EV +D P   EV VRI    LCHSD+      D PA  P +LGHE
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT-GDLPAPLPAVLGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             GVVE VG  V GV  GD V+  ++  C  C  C   + NLC      I      D T 
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILGGQLPDGTR 119

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           RF    GE +     + +F+EYTV+  A VVK+D  +P +RA LL CGV+TGVGA   TA
Sbjct: 120 RF-TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178

Query: 198 NVEVGSTVVIFGLGSIGLAV 217
            V  G TV + G G +GL  
Sbjct: 179 RVRPGDTVAVIGCGGVGLNA 198

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  198 bits (505), Expect = 1e-62
 Identities = 98/200 (49%), Positives = 123/200 (61%), Gaps = 1/200 (0%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+A A G+PL I+EV V+ P   EV VRI+ T +CH+D       D   VFP ILGHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G+VE+VGE V  V  GD VIP + A+C EC  C S K NLC A        +  D TS
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTS 122

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           RF    G+ I+H++  S+FSEYTV+    + K++P  P    CLL CGV+TG+GA   TA
Sbjct: 123 RFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181

Query: 198 NVEVGSTVVIFGLGSIGLAV 217
            VE G TV +FGLG IGL+V
Sbjct: 182 KVEEGDTVAVFGLGGIGLSV 201

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  172 bits (438), Expect = 2e-52
 Identities = 79/204 (38%), Positives = 108/204 (52%), Gaps = 5/204 (2%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           ++  AA+   PG P V+++V +D P   EV VRI+ T +CH+D+   +    P   P +L
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV-RDGGLPTPLPAVL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC-SAFPFKISPWMPR 133
           GHE  GVVE+VG  V G+  GD V+  F A C EC  C S     C + FP   S   P 
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRP- 117

Query: 134 DQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
           D ++      G  +H HF   SSF+ Y V+   +VVKVD  VP      L CG+ TG GA
Sbjct: 118 DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGA 177

Query: 193 AWRTANVEVGSTVVIFGLGSIGLA 216
                    GS++ +FG G++GLA
Sbjct: 178 VLNVLKPRPGSSIAVFGAGAVGLA 201

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  163 bits (414), Expect = 6e-49
 Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 7/201 (3%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK--DFPA-VFPRIL 74
           +AA+   PG+P  ++E+ +D P + EV V+++ + LCHSD     +   D P   +P + 
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSD---EHLVTGDLPMPRYPILG 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  GVV  VG  V GV  GD V+  F+  C  C  C +   NLC      ++     D
Sbjct: 60  GHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISD 119

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            T RF    G+ +     + +FSEYTV+  A VVK+D  +P ++ACL+ CGV TG G+A 
Sbjct: 120 GTYRFH-ADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAV 178

Query: 195 RTANVEVGSTVVIFGLGSIGL 215
             A+V  G TVV+ G+G +G+
Sbjct: 179 NIADVRPGDTVVVMGIGGVGI 199

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  150 bits (380), Expect = 7e-44
 Identities = 83/207 (40%), Positives = 104/207 (50%), Gaps = 10/207 (4%)

Query: 18  RAAIATAPG--------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           RAA+    G         PLVI+EV +DPP   EV V+I    LCHSD++     D P  
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVIN-GDRPRP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHEA GVV  VGE V  +  GD V+  F+  C  C  C   +  LC         
Sbjct: 61  LPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGA 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                   R + LRG  I+H + VS+F+EY V+    VVK+D  VP   A L  C V TG
Sbjct: 121 GTLLSGGRRLR-LRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
           VGA   TA V  G +V + GLG +GL+
Sbjct: 180 VGAVVNTAGVRPGQSVAVVGLGGVGLS 206

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  126 bits (317), Expect = 1e-34
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 10/200 (5%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           R  IA + G P+ ++ ++V  P   EV V I    +CH+D+ + +       FP +LGHE
Sbjct: 3   RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHY-REGGINDEFPFLLGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
           A GVVE+VGE V  V  GD V+ ++ A C +C  C+  +   C         +   + T 
Sbjct: 62  AAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC---------FDTHNATQ 112

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +     G  +   + + +F+E T++      KVDP   P  A LL CGV  G+GAA  T 
Sbjct: 113 KMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTG 172

Query: 198 NVEVGSTVVIFGLGSIGLAV 217
            V+ G +V + G G +G A 
Sbjct: 173 GVKRGDSVAVIGCGGVGDAA 192

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  121 bits (307), Expect = 2e-33
 Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 26/204 (12%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPR 72
            +  +AA+    G+PL I+EV V  P   EV +++    +CH+D+   K  D+P    P 
Sbjct: 1   MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK-GDWPVPKLPL 59

Query: 73  ILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           I GHE +G V  VGE V G+  GD V +   +  C EC  CRS   NLC           
Sbjct: 60  IPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLC----------- 108

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                   + + G T         ++EY V+   +VVK+   +    A  L C   T   
Sbjct: 109 ------PNQKITGYTTD-----GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157

Query: 192 AAWRTANVEVGSTVVIFGLGSIGL 215
           A  + ANV+ G  V + G G +G 
Sbjct: 158 AL-KKANVKPGKWVAVVGAGGLGH 180

Length = 339

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  117 bits (296), Expect = 1e-31
 Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 6/204 (2%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+   P  PL I+E+ V  P   E+ +R+    +CHSD+   K  + P   P +LGHE
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK-GELPFPPPFVLGHE 60

Query: 78  AIGVVESVGENVDGVV---EGDVVIPHFLADCTECVGCRSKKGNLC-SAFPFKISPWMPR 133
             G V  VG NV+       GD V+  F+  C +C  C   K NLC   F +        
Sbjct: 61  ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
           D T+R   L G  ++ + S+   +EY V+    +  +  ++    + +L C   T  GA 
Sbjct: 121 DGTTRLFRLDGGPVYMY-SMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGAL 179

Query: 194 WRTANVEVGSTVVIFGLGSIGLAV 217
              A+V  G TV + G+G +G + 
Sbjct: 180 KHAADVRPGETVAVIGVGGVGSSA 203

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  115 bits (289), Expect = 2e-31
 Identities = 48/176 (27%), Positives = 66/176 (37%), Gaps = 27/176 (15%)

Query: 43  EVRVRIICTSLCHSDVTFWK-MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
           EV VR+    LC +D+   +     P   P ILGHE  GVV  VG  V GV  GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
               C  C  CR                                 I        F+EY V
Sbjct: 61  PNLGCGTCELCRELCPGGG--------------------------ILGEGLDGGFAEYVV 94

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           +   ++V +   +    A LL   ++T   A  R   ++ G TV++ G G +GL  
Sbjct: 95  VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLA 150

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  100 bits (251), Expect = 3e-25
 Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 32/207 (15%)

Query: 17  CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRI 73
            +AA+    GE P  + +V V  P   EV V++  + +CH+D+      D+P     P I
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALG-DWPVKPKLPLI 59

Query: 74  LGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE  GVV +VG  V G+  GD V +      C +C  CR+    LC            
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN---------- 109

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
           +  +    D             +F+EY + D  +V  +   +   +A  L C   T V  
Sbjct: 110 QKNSGYTVD------------GTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVT-VYK 156

Query: 193 AWRTANVEVGSTVVIFG----LGSIGL 215
           A + A ++ G  VVI G    LG +G+
Sbjct: 157 ALKKAGLKPGDWVVISGAGGGLGHLGV 183

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 99.3 bits (248), Expect = 7e-25
 Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 25/195 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGH 76
           +AAI   P +PL I+EV    P   EV +++    +C+ D+ FWK   FP   +P ILGH
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK-GFFPRGKYPLILGH 60

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G VE VGE V+    GD VI ++   C +C  C S + NLC                
Sbjct: 61  EIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC---------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                 R    +       F+EY  +    +VK+   V    A L +C V T V A  + 
Sbjct: 105 ------RNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KR 157

Query: 197 ANVEVGSTVVIFGLG 211
           A V+ G TV++ G G
Sbjct: 158 AGVKKGDTVLVTGAG 172

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 99.2 bits (248), Expect = 9e-25
 Identities = 62/201 (30%), Positives = 80/201 (39%), Gaps = 24/201 (11%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+    GEPL I EV    P    V V +    +C SD   W+  D     P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             GVV  VGE+V     GD V   F+  C  C  CR+   N+C              Q  
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC------------EHQ-- 107

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHV--VKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                       F    SF+EY  +  A V  V++   V    A  L C  +T   A   
Sbjct: 108 --------VQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159

Query: 196 TANVEVGSTVVIFGLGSIGLA 216
            A V+ G  V + G G +GL+
Sbjct: 160 QARVKPGEWVAVHGCGGVGLS 180

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 98.6 bits (246), Expect = 2e-24
 Identities = 53/201 (26%), Positives = 78/201 (38%), Gaps = 19/201 (9%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV-TFWKMKDFPAVFPRILGH 76
           +AA+    G  + ++E     P   +V +R+  T +C SD+  +   + F      ILGH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G V  VG  V G   GD V+      C  C  CR+ + NLC    F     +     
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL----- 115

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                + G           F+EY  +     +   P      A  L+  ++T        
Sbjct: 116 --GGGIDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163

Query: 197 ANVEVGSTVVIFGLGSIGLAV 217
           A V  G TVV+ G G IGL  
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLA 184

Length = 350

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 58/191 (30%), Positives = 78/191 (40%), Gaps = 23/191 (12%)

Query: 26  GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVES 84
              LV++EV V  P   EV V++    +CHSD+             P  LGHE  G V  
Sbjct: 11  KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVE 70

Query: 85  VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 144
           VG  V     GD V    +  C  C  CR  +GNLC             +Q      + G
Sbjct: 71  VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQGMPGLGIDG 118

Query: 145 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGST 204
                      F+EY V+    +V V   VP  +A + +  V T   A  R   V+ G T
Sbjct: 119 ----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGET 168

Query: 205 VVIFGLGSIGL 215
           V++ GLG +GL
Sbjct: 169 VLVIGLGGLGL 179

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 94.7 bits (236), Expect = 4e-23
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 25/195 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGH 76
           +A I     +   I+EV    P   EV +++    LC+ D+   +   +P + +P ILGH
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQ-GFYPRMKYPVILGH 60

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G VE VGENV G   GD V     A    C  CRS +   C                
Sbjct: 61  EVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC---------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
            + +   GE +  F     F+EY  + +  +VKV P V    A ++ C          R 
Sbjct: 105 -KNRLGYGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RR 157

Query: 197 ANVEVGSTVVIFGLG 211
           A V+ G TV++ G G
Sbjct: 158 AGVKKGETVLVTGAG 172

Length = 334

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 88.5 bits (220), Expect = 8e-23
 Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 22/129 (17%)

Query: 42  HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
            EV VR+    +C SD+  ++ +  P   P ILGHE  G+VE VG  V G+  GD V+ +
Sbjct: 2   GEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVY 61

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            L  C +C  CR  + NLC                       G  +        F+EY V
Sbjct: 62  PLIPCGKCAACREGRENLCPN-----------------GKFLGVHLD-----GGFAEYVV 99

Query: 162 LDIAHVVKV 170
           +   ++V +
Sbjct: 100 VPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 60/203 (29%), Positives = 87/203 (42%), Gaps = 36/203 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A +   PGE L ++EV V  P   EV +++    +C +D+  ++  +F A  P + GHE
Sbjct: 2   KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE-GEFGAAPPLVPGHE 59

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             GVV +VG  V G   GD   V P+    C EC  CR  + NLC               
Sbjct: 60  FAGVVVAVGSKVTGFKVGDRVAVDPNIY--CGECFYCRRGRPNLCENL------------ 105

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGA 192
                   G T +       F+EY V+    V K+   +    A L   LSC V      
Sbjct: 106 -----TAVGVTRN-----GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH----- 150

Query: 193 AWRTANVEVGSTVVIFGLGSIGL 215
                 ++ G +V++FG G IGL
Sbjct: 151 GLDLLGIKPGDSVLVFGAGPIGL 173

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 92.2 bits (230), Expect = 3e-22
 Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 36/206 (17%)

Query: 18  RAAIATAPG----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAV 69
           +A +   PG     PL + EV V  P   EV +++    +C +D+            P  
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLP----PPK 57

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
            P I GHE +G VE+VG  V     GD V +P   + C EC  CRS + NLC    F   
Sbjct: 58  LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-- 115

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
                          G T+        ++EY V D      +        A  L C    
Sbjct: 116 ---------------GYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGII 155

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG 214
           G   A + A ++ G  + ++G G+  
Sbjct: 156 GYR-ALKLAGLKPGQRLGLYGFGASA 180

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 88.8 bits (221), Expect = 5e-21
 Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 27/205 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +AA     G+PL +++V V  P   +V VR+    +CHSD+           P   P  L
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G VE VG  VDG+ EGD V+ H    C  C  CR  + N C              
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCEN------------ 109

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
             +RF    G           F+EY ++    +VK+   + P  A  L+    T   A  
Sbjct: 110 --ARF---PGIGTD-----GGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159

Query: 195 RTANV-EVGSTVVIFGLGSIG-LAV 217
           +     + GSTVV+ G+G +G +AV
Sbjct: 160 KALPYLDPGSTVVVIGVGGLGHIAV 184

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 88.4 bits (220), Expect = 7e-21
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 30/200 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A + T PG+ L  +++    P   EV V++    +C SD+  + +       P +LGHE
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRY-LGTGAYHPPLVLGHE 59

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G VE VG  VD +  GD   V P  L  C +C  C+  + +LCS +            
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNP--LLPCGKCEYCKKGEYSLCSNY------------ 105

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                D  G          +F+EY  +   +++K+   V    A ++    +  + A   
Sbjct: 106 -----DYIGSRRD-----GAFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVALHAVRL 154

Query: 196 TANVEVGSTVVIFGLGSIGL 215
            A + +G TVV+ G G+IGL
Sbjct: 155 -AGITLGDTVVVIGAGTIGL 173

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 87.8 bits (218), Expect = 1e-20
 Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 25/202 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+  A G PL  +EV V  P   EV ++I    +CH+D+   +     + +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G V  VG  V+G   GD V +   +  C  C  CR    NLC                
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA------------- 107

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                  G     + +   ++EY V D  + V +   +P  +A  L C   T V +A R 
Sbjct: 108 ----VNTG-----YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT-VYSALRD 157

Query: 197 ANVEVGSTVVIFGLGSIG-LAV 217
           A    G  V + G+G +G LAV
Sbjct: 158 AGPRPGERVAVLGIGGLGHLAV 179

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 54/211 (25%), Positives = 80/211 (37%), Gaps = 36/211 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW------------KMKD 65
           +AA    PG+PL   E+    P   EV V++    +CHSD+  W             + D
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 66  FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125
                P +LGHE +G V +VG +   V  GD V+ +    C EC  C +   NLC+    
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCA---- 117

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                         K               ++EY ++  +  +     + P  A  L+C 
Sbjct: 118 --------------KGRALGIFQD----GGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159

Query: 186 VSTGVGAAWRTANVEVGST-VVIFGLGSIGL 215
             T   A  +     V    VVI G G +GL
Sbjct: 160 GLTAYSAV-KKLMPLVADEPVVIIGAGGLGL 189

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 36/206 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+   P + + ++EV V  P   EV V++    +C +DV   +        PRILGHE
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G +  VG+ V G   GD V       C EC  C     N+C                 
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMC----------------- 103

Query: 138 RFKDLRGETIHHFVSVSSFSEYTV-----LDIAHVVKVDPTVPPNRACL---LSCGVSTG 189
              + +            F+EY       +    V+K+   V    A L   L+C +   
Sbjct: 104 --PNYKKFGNL---YDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI--- 155

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGL 215
              A R A ++ G TV++ G G IGL
Sbjct: 156 --NAQRKAGIKPGDTVLVIGAGPIGL 179

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 30/202 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A +   PG  L + ++    P + EV VR+    +C SD+  +  ++  A +PRILGHE
Sbjct: 2   KALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G V  VGE V G+  GD  VV P+    C EC  CR  + N C      +        
Sbjct: 61  LSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCE----NLQ------- 107

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                 + G  +H       F+EY V+    ++  +  +  ++A L+   ++ G  A  R
Sbjct: 108 ------VLG--VH---RDGGFAEYIVVPADALLVPE-GLSLDQAALVEP-LAIGAHAVRR 154

Query: 196 TANVEVGSTVVIFGLGSIGLAV 217
            A V  G TV++ G G IGL V
Sbjct: 155 -AGVTAGDTVLVVGAGPIGLGV 175

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 59/210 (28%), Positives = 81/210 (38%), Gaps = 28/210 (13%)

Query: 17  CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
            RAA+ T PG+PL I EV +       V VR+    +C SDV     +      P ILGH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 77  EAIGVVESVGENVD------GVVEGD-VVIPHFLADCTECVGCRSKKGNLC-SAFPFKIS 128
           E +G V ++G  V        +  GD V        C  C  C       C +   +   
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCENRKKYGHE 119

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVDPTVPPNRACLLSCGVS 187
                        L G           ++E+  L     +V+V   VP   A   +C ++
Sbjct: 120 ASCDDPH------LSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALA 163

Query: 188 TGVGAAWRTAN-VEVGSTVVIFGLGSIGLA 216
           T V AA   A  V  G TVV+ G G +GL 
Sbjct: 164 T-VLAALDRAGPVGAGDTVVVQGAGPLGLY 192

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 83.3 bits (207), Expect = 5e-19
 Identities = 65/208 (31%), Positives = 85/208 (40%), Gaps = 43/208 (20%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM---KDFPAVFPRILG 75
           AA+   PG+ L ++E  +  P   EV VR+    +C SDV ++K     DF    P +LG
Sbjct: 1   AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLG 59

Query: 76  HEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           HE+ G V +VG  V  +  GD V     +P     C  C  C+S + NLC    F  +P 
Sbjct: 60  HESAGTVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCPDMRFAATP- 113

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 187
            P D T                      Y         K+   V      L   LS GV 
Sbjct: 114 -PVDGT-------------------LCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGV- 152

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGL 215
                A R A V  G TV++FG G IGL
Sbjct: 153 ----HACRRAGVRPGDTVLVFGAGPIGL 176

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 80.6 bits (200), Expect = 4e-18
 Identities = 49/198 (24%), Positives = 77/198 (38%), Gaps = 18/198 (9%)

Query: 22  ATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGV 81
           A      L        P    +V ++I    +CHSD+   + +  P  +P + GHE +G+
Sbjct: 5   ARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGI 64

Query: 82  VESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFK 140
           V +VG  V     GD V      D C  C  C+S +   C           P+   +   
Sbjct: 65  VVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYC-----------PKGVVTYNG 113

Query: 141 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE 200
                TI        ++++ V+D   V K+   +    A  L C   T V +  +   V 
Sbjct: 114 KYPDGTITQ----GGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT-VYSPLKRNGVG 168

Query: 201 VGSTVVIFGLGSIG-LAV 217
            G  V + G+G +G LAV
Sbjct: 169 PGKRVGVVGIGGLGHLAV 186

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 80.4 bits (199), Expect = 6e-18
 Identities = 63/207 (30%), Positives = 89/207 (42%), Gaps = 37/207 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDV-TFWKMKDFPAVFP-RIL 74
           +A      G+   I++ I    PN  +  VR    + C SDV T W     P      IL
Sbjct: 2   KAFAMLGIGKVGWIEKPIPVCGPN--DAIVRPTAVAPCTSDVHTVWG--GAPGERHGMIL 57

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVIPHFLAD--CTECV-GCRSKKGNLCSAFPFKISPW 130
           GHEA+GVVE VG  V     GD V++P    D        G  S+ G +   + F     
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF----- 112

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYT-VLDI-AHVVKVDPTVPPNRACLLSCGVST 188
                 S FKD              F+EY  V D  A++  +   +   +A +L   +ST
Sbjct: 113 ------SNFKD------------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMST 154

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGL 215
           G   A   AN+++G TV +FG+G +GL
Sbjct: 155 GFHGAEL-ANIKLGDTVAVFGIGPVGL 180

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 80.0 bits (198), Expect = 9e-18
 Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 22/178 (12%)

Query: 41  SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP 100
            H+  VR+  TS+C SD+  ++     A    ILGHE +G V  VG +V  +  GD V  
Sbjct: 25  PHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSV 84

Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT 160
             +  C  C  CR      C    +               D               +EY 
Sbjct: 85  PCITFCGRCRFCRRGYHAHCENGLWGWKL-------GNRID------------GGQAEYV 125

Query: 161 VLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
            +  A  ++ K+   +P   A +LS  + TG   A   A ++ GSTV + G G +GL 
Sbjct: 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLC 182

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 22/190 (11%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILGHEAIGVVESV 85
           L ++E     P   EVRVR+    +C SD+ +++   F  V    P +LGHE  GVVE+V
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68

Query: 86  GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
           G  V G+  G  V  +    C  C  CR+ + NLC    F  S         RF  ++G 
Sbjct: 69  GPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGS-------AMRFPHVQG- 120

Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205
                     F EY V+D +  V +   +   RA  L+  ++  + A  R  ++  G  V
Sbjct: 121 ---------GFREYLVVDASQCVPLPDGLSLRRAA-LAEPLAVALHAVNRAGDL-AGKRV 169

Query: 206 VIFGLGSIGL 215
           ++ G G IG 
Sbjct: 170 LVTGAGPIGA 179

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 23/190 (12%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL-GHEAIGVVESVGE 87
           + + E  V  P   EV +R+  + LC SD+ ++        +  ++ GHE  GVV +VG 
Sbjct: 12  VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGP 71

Query: 88  NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
            V     GD V+ +    C  C  CR     LC++                  +  G   
Sbjct: 72  GVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-----------WNRDG--- 117

Query: 148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 207
                    +EY ++    ++ +   +      LL CG+ T    A R   V    TV++
Sbjct: 118 -------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTVLV 169

Query: 208 FGLGSIGLAV 217
            G G +GL  
Sbjct: 170 VGAGPVGLGA 179

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 55/203 (27%), Positives = 81/203 (39%), Gaps = 31/203 (15%)

Query: 18  RAAIATAPGEPLV-IDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           +A + T PG   V + EV    P   EV +++    +C SD+  +K    P   P +LGH
Sbjct: 2   KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGH 61

Query: 77  EAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           E  G +  VG +V+G   GD VV     + C  C  CR    NLC               
Sbjct: 62  EFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPH------------- 108

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGA 192
               +   G           F+EY ++    + ++   +    A L   L+  V     A
Sbjct: 109 ----RKGIGTQAD-----GGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----A 155

Query: 193 AWRTANVEVGSTVVIFGLGSIGL 215
               + +  G TVV+FG G IGL
Sbjct: 156 VAERSGIRPGDTVVVFGPGPIGL 178

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 75.0 bits (185), Expect = 5e-16
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 34/207 (16%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
           +A +    G P  L   ++    P   EV VR+   +L H D+   +      +  P IL
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  GVVE+VG  V  V  G  V+ +    C  C  C + + NLC+ +           
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY----------- 110

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                  + GE +        ++EY  +   +++ +   +    A        T    AW
Sbjct: 111 ------GILGEHVDGG-----YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT----AW 155

Query: 195 RT----ANVEVGSTVVIFGLGS-IGLA 216
                 A +  G TV++ G GS +G A
Sbjct: 156 HMLVTRARLRPGETVLVHGAGSGVGSA 182

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 41/210 (19%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A   T PG PL + E  V  P   EV +++    +CHSD    +       +PR+ GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G +++VGE V     GD V +      C  C  CR                       
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACR----------------------- 98

Query: 137 SRFKDLRGETIH----HFVSVSS---FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
                 RG+ +H        V+    ++EY +     + ++   +    A  L C GV+T
Sbjct: 99  ------RGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT 152

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG-LAV 217
               A R +  + G  V + G+G +G LAV
Sbjct: 153 --FNALRNSGAKPGDLVAVQGIGGLGHLAV 180

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 55/210 (26%), Positives = 74/210 (35%), Gaps = 58/210 (27%)

Query: 31  IDEVIVDPPNSHEVRVRIICTSLCHSDV-------TFWKMKDFP---------AVFPRIL 74
           ++EV   P    EV++++    +C SD+        F      P            P  L
Sbjct: 14  VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIF-----IPTEGHPHLTGETAPVTL 68

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  GVV  VG  V G   GD  VV P     C  C  C+    NLC +  F       
Sbjct: 69  GHEFSGVVVEVGSGVTGFKVGDRVVVEPTI--KCGTCGACKRGLYNLCDSLGF------- 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSS--FSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 187
                             +      F+EY V+   HV K+   VP   A L   L+    
Sbjct: 120 ----------------IGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH 163

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
                A R +  + G T ++ G G IGL  
Sbjct: 164 -----AVRRSGFKPGDTALVLGAGPIGLLT 188

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 72.3 bits (178), Expect = 4e-15
 Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 33/179 (18%)

Query: 46  VRIICTSLCHSDVTFWKMKDFPAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104
           V+++ T++C +D+   K  D P V P RILGHE +GVVE VG  V     GD V+   ++
Sbjct: 30  VKMLKTTICGTDLHILK-GDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCIS 88

Query: 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH----HFVSV--SSFSE 158
            C  C  CR    + C +       W           + G  I      +V +  +  S 
Sbjct: 89  SCGTCGYCRKGLYSHCES-----GGW-----------ILGNLIDGTQAEYVRIPHADNSL 132

Query: 159 YTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           Y         K+   V    A +LS  + TG         V+ G TV I G G +GLA 
Sbjct: 133 Y---------KLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAA 182

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 70.6 bits (174), Expect = 2e-14
 Identities = 60/201 (29%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 30  VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP-RILGHEAIGVVESVGEN 88
           V D  I DP    +  VR+  T++C SD+  +     P +    ILGHE +GVVE VG  
Sbjct: 17  VPDPKIEDP---TDAIVRVTATAICGSDLHLY-HGYIPGMKKGDILGHEFMGVVEEVGPE 72

Query: 89  VDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
           V  +  GD VV+P  +A C EC  C+    + C             D T+   ++     
Sbjct: 73  VRNLKVGDRVVVPFTIA-CGECFYCKRGLYSQC-------------DNTNPSAEMAKLYG 118

Query: 148 HHFVSVSSFS-----------EYTVLDIAHV--VKVDPTVPPNRACLLSCGVSTGVGAAW 194
           H    +  +S           EY  +  A V   K+   +   +A  LS  + TG  AA 
Sbjct: 119 HAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA- 177

Query: 195 RTANVEVGSTVVIFGLGSIGL 215
             A V+ G TV ++G G +GL
Sbjct: 178 ELAEVKPGDTVAVWGCGPVGL 198

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 45/204 (22%), Positives = 64/204 (31%), Gaps = 50/204 (24%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRIL 74
           +A +    G P  L + EV    P   EV VR+    +   DV   +    P    P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G EA GVV +VG  V G   GD V                                    
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAALGG------------------------------- 90

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                                ++EY V+    +V +   +    A  L     T   A +
Sbjct: 91  ---------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135

Query: 195 RTANVEVGSTVVIFG-LGSIGLAV 217
             A ++ G TV++ G  G +G A 
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAA 159

Length = 326

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 65/209 (31%), Positives = 89/209 (42%), Gaps = 39/209 (18%)

Query: 18  RAAIATAPGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           RA +   PG+     V D VI +P    +  +R++ T +C SD+  ++    P   P  +
Sbjct: 2   RATVIHGPGDIRVEEVPDPVIEEP---TDAVIRVVATCVCGSDLWPYRGVS-PTRAPAPI 57

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE +GVVE VG  V  V  GD VI  F      C  CR+     C              
Sbjct: 58  GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC-------------- 103

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVDPTVPPNRACL------LSCGV 186
                  + G     FV      EY  + +A   +VKV P  P +   L      LS  +
Sbjct: 104 -------VHGGFWGAFVD-GGQGEYVRVPLADGTLVKV-PGSPSDDEDLLPSLLALSDVM 154

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGL 215
            TG  AA  +A V  GSTVV+ G G++GL
Sbjct: 155 GTGHHAA-VSAGVRPGSTVVVVGDGAVGL 182

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 38/205 (18%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF-----WKMKDFPAVFPRI 73
           A + T PG    + EV V  P   EV ++++ TS+C +DV       W         P++
Sbjct: 1   ALMKTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKP--PQV 58

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           +GHE  G V  +G  V+G+  GD V       C +C  CR  + ++C             
Sbjct: 59  VGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC------------- 105

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGV 190
                    +   I    +   F+EY V+   ++ K   ++PP  A +   L   V T +
Sbjct: 106 ---------QNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL 156

Query: 191 GAAWRTANVEVGSTVVIFGLGSIGL 215
                 A    G +V++ G G IGL
Sbjct: 157 ------AGPISGKSVLVTGAGPIGL 175

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 46/210 (21%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA---VFPRIL 74
           +A + T  G    + EV V  P   EV ++++  S+C +DV  ++  ++       P I 
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIF 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           GHE  G V  VGE V  V  GD V     I      C +C  CR+   ++C         
Sbjct: 62  GHEFAGEVVEVGEGVTRVKVGDYVSAETHIV-----CGKCYQCRTGNYHVC--------- 107

Query: 130 WMPRDQTSRF--KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
                Q ++    D  G           F+EY V+   ++ K D  +PP  A      + 
Sbjct: 108 -----QNTKILGVDTDG----------CFAEYVVVPEENLWKNDKDIPPEIA-----SIQ 147

Query: 188 TGVGAAWRTANVE--VGSTVVIFGLGSIGL 215
             +G A  T       G +V+I G G IGL
Sbjct: 148 EPLGNAVHTVLAGDVSGKSVLITGCGPIGL 177

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 65.7 bits (161), Expect = 7e-13
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 18 RAAIATAPGEPLVIDEV-IVDP-PNSHEVRVRIICTSLCHSDVTF---WKMKDFPAVFPR 72
          +A      G P V++   +  P P   EV V++    +   D+          FP   P 
Sbjct: 2  KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 73 ILGHEAIGVVESVGENVDGVVEGDVVI 99
          I GH+  GVV +VG  V G   GD V 
Sbjct: 62 IPGHDVAGVVVAVGPGVTGFKVGDEVF 88

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 28/189 (14%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88
           L I+E  +  P + EVRV++    +C SD   ++  +  A +PR++GHE  GV+++VGE 
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 89  VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
           VD    G+ V    +  C  C  C   K N+C++    +   + RD              
Sbjct: 72  VDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSL---VVLGVHRD-------------- 114

Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV--GSTVV 206
                  FSEY V+   +  ++   +    A +    V     AA  T           +
Sbjct: 115 -----GGFSEYAVVPAKNAHRIPDAIADQYAVM----VEPFTIAANVTGRTGPTEQDVAL 165

Query: 207 IFGLGSIGL 215
           I+G G +GL
Sbjct: 166 IYGAGPVGL 174

Length = 339

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 46  VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD 105
           V++   ++C SD+  ++          +LGHE +G V  VG  V  +  GD V+  F   
Sbjct: 30  VKVTAAAICGSDLHIYRGHIPSTP-GFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIA 88

Query: 106 CTECVGCRSKKGNLCS---AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL 162
           C EC  CR  +   C+    F +  SP +   Q              +V V  F++ T  
Sbjct: 89  CGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQA------------EYVRV-PFADGT-- 133

Query: 163 DIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
               ++K+   +    A LL   + TG   A + A V  G TV + G G +GL
Sbjct: 134 ----LLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGL 181

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 64.1 bits (157), Expect = 4e-12
 Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 48/211 (22%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF-----WKMKDFPAVFPR 72
           +A +       L + +V V  P  ++V +++  T++C +DV       W  K  P   P 
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV--PM 59

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIP--HFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           ++GHE +G V  VG  V G   GD V    H +  C  C  CR+ + +LC          
Sbjct: 60  VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIV--CGHCRNCRAGRRHLC---------- 107

Query: 131 MPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
                    ++ +G      V V+   +F+EY V+   +V K+   +P + A +      
Sbjct: 108 ---------RNTKG------VGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFD---- 148

Query: 188 TGVGAAWRTA---NVEVGSTVVIFGLGSIGL 215
              G A  TA   ++ VG  V+I G G IG+
Sbjct: 149 -PFGNAVHTALSFDL-VGEDVLITGAGPIGI 177

Length = 341

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 18  RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           +A +   PG   V D   V  P   +  +  VRI  T++C SD+  ++     A    +L
Sbjct: 2   KAVVYGGPGNVAVED---VPDPKIEHPTDAIVRITTTAICGSDLHMYR-GRTGAEPGLVL 57

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCS 121
           GHEA+G VE VG  V+ +  GD VV+P F   C  C  C+     +C 
Sbjct: 58  GHEAMGEVEEVGSAVESLKVGDRVVVP-FNVACGRCRNCKRGLTGVCL 104

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 28/203 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+        V+ E  + P    E  V++    +CH+D+      DF     RILGHE
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV-ANGDFGDKTGRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            IG+V+ VG  V  +  GD V I  F   C  C  C + +  LC                
Sbjct: 61  GIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC---------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWR 195
            R     G T+         +E  ++   + VKV   + P +A  ++C GV+T    A +
Sbjct: 105 -RSVKNAGYTVD-----GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT--YKAIK 156

Query: 196 TANVEVGSTVVIFGLGSIG-LAV 217
            + ++ G  + I+G G +G LA+
Sbjct: 157 VSGIKPGQWIAIYGAGGLGNLAL 179

Length = 338

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MK--DFPAVFPRILGHEAIGVVESV 85
           L I    + P   H+VRVR+    +C SDV + K M+  DF    P ++GHE  G++E V
Sbjct: 29  LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEV 88

Query: 86  GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           G  V  +V GD V       C  C  C+  + NLC    F  +P
Sbjct: 89  GSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP 132

Length = 364

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 42/180 (23%), Positives = 59/180 (32%), Gaps = 48/180 (26%)

Query: 18  RAAIATAP-GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRIL 74
           +AA+ T P G  LV+ +V V  P   EV V++   +L   D   WK +D+  +  +P IL
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAIL 58

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  G V  VG  V     GD V                + G                 
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV----AGFVHGGNPNDPRNG----------------- 97

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                               +F EY V D     K+   +    A  L  G+ T    A 
Sbjct: 98  --------------------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVT-AALAL 136

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 60.6 bits (147), Expect = 6e-11
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 36/202 (17%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM-KD----FPAV--FPRILGHEAIGV 81
           L +++V V      E+ +R+    +C SD+  ++  KD    +P +  FP ++GHE  GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 82  VESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 141
           VE  G+NV    +GD V    +  C  C  CRS   N C                   K+
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC----------------KNLKE 142

Query: 142 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV---PPNRACLLSCGVS-TGV---GAAW 194
           L       F +  +F+EY  ++  +  +++        ++A      V  T V   G   
Sbjct: 143 L------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFI 196

Query: 195 RTANVEVGSTVVIFGLGSIGLA 216
           R      G+ VV++G G IGLA
Sbjct: 197 RGGGFRPGAYVVVYGAGPIGLA 218

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 41/198 (20%), Positives = 63/198 (31%), Gaps = 61/198 (30%)

Query: 23  TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAI 79
           T PG    ++E     P   +V VR+    +C SD+  +   +        P   GHE  
Sbjct: 2   TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGW 60

Query: 80  GVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRF 139
           G V ++G  V G+  GD V                                         
Sbjct: 61  GRVVALGPGVRGLAVGDRVA---------------------------------------- 80

Query: 140 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP--PNRACLLSCGVSTGVGAAWRTA 197
                      +S  +F+EY + D  H V +   +         L C ++      +R  
Sbjct: 81  ----------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRG 125

Query: 198 NVEVGSTVVIFGLGSIGL 215
            +  G TV + G G IGL
Sbjct: 126 WIRAGKTVAVIGAGFIGL 143

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 59.9 bits (145), Expect = 9e-11
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 21/194 (10%)

Query: 23  TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRILGHEAIG 80
           T PG+P+V   V +    + +V V++    +CH+D++++ M         P  LGHE  G
Sbjct: 5   TEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYM-GVRTNHALPLALGHEISG 63

Query: 81  VVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFK 140
            V   G      +   V++P  +  C EC  C++ +G +C            R Q     
Sbjct: 64  RVIQAGAGAASWIGKAVIVPAVIP-CGECELCKTGRGTIC------------RAQKMPGN 110

Query: 141 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE 200
           D++G    H V  +      V+D A +      +P     +++  V+T   AA + A ++
Sbjct: 111 DMQGGFASHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPYQAAVQ-AGLK 165

Query: 201 VGSTVVIFGLGSIG 214
            G  V++ G G +G
Sbjct: 166 KGDLVIVIGAGGVG 179

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 36/165 (21%)

Query: 20  AIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDV--------TFWKMKDFPAVF 70
           AIA  PG+P V    I +P P   EV VR +   +C +D         T    +DF    
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF---- 58

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
             +LGHEA+GVVE VG+   G+  GD+V+P       +C+ CR  + + C          
Sbjct: 59  -LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE--------- 107

Query: 131 MPRDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTV 174
                T  + + RG   +H F       EY V D  ++VKV P++
Sbjct: 108 -----TGEYTE-RGIKGLHGF-----MREYFVDDPEYLVKVPPSL 141

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 33/197 (16%)

Query: 18  RAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSD---VTFWKMKDFPAVFPRI 73
           +A +    G E L +++V    P   EV +R+    +   D   +   K+K      P I
Sbjct: 2   KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVK----PMPHI 57

Query: 74  LGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            G E  GVVE VG++V GV +GD VV+ + + D T C  C S    LC            
Sbjct: 58  PGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGT-CDMCLSGNEMLC------------ 104

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
                     R   I   VS   ++EY V+   ++ K+  ++    A  L     T   A
Sbjct: 105 ----------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154

Query: 193 AWRTANVEVGSTVVIFG 209
             +TA +  G TVV+FG
Sbjct: 155 L-KTAGLGPGETVVVFG 170

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 47/180 (26%), Positives = 70/180 (38%), Gaps = 39/180 (21%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVF-------PRILGHEAIGVVESVGENVDGVVEG 95
           +V V++  + LC SD+        P +F       P  LGHE  G VE+VG  VD +  G
Sbjct: 27  DVLVKVASSGLCGSDI--------PRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPG 78

Query: 96  DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS 155
           D V    L  C  C  C     +LC+ + F           SR                 
Sbjct: 79  DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---------GSR-------------RDGG 116

Query: 156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
            +EY V+   ++  +   +P      +   ++ G+ A       E G  V+I G G+IGL
Sbjct: 117 NAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCE-GKNVIIIGAGTIGL 174

Length = 347

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
          +A +  + G P    + EV    P   +V VR+  + +   D    +         P IL
Sbjct: 2  KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61

Query: 75 GHEAIGVVESVGENVDGVVEGDVV 98
          G +  GVVE+VGE V     GD V
Sbjct: 62 GCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--PAVFPRI 73
          RA      G P  L I+E+ V  P + EV +R+    L  +D   ++   +  P   P  
Sbjct: 2  RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADA-MFRRGAYIEPPPLPAR 60

Query: 74 LGHEAIGVVESVGENVDGVVEGDVV 98
          LG+EA GVVE+VG  V G   GD V
Sbjct: 61 LGYEAAGVVEAVGAGVTGFAVGDRV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
          +A +    G P  LV++EV  +P    EVR+R+    +   D+      +++K  P + P
Sbjct: 2  KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK--PPL-P 58

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVVI 99
           + G E  GVVE+VGE V G   GD V+
Sbjct: 59 FVPGSEVAGVVEAVGEGVTGFKVGDRVV 86

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 39/212 (18%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV-------TFWKMKDFPAVF 70
           RA +   P +   ++EV V  P   E+ V++    +C  D+       +FW  ++ P   
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 71  --PRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             P I GHE +G V  +GE  +  GV  GD VI   +  C  C  C   +  +C      
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQK---- 116

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LS 183
                         DL G   +    ++ +  +    I H  KV   +PP  A L   L+
Sbjct: 117 -------------HDLYGFQNNVNGGMAEYMRFPKEAIVH--KVPDDIPPEDAILIEPLA 161

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
           C +     A  R AN++    VV+ G G +GL
Sbjct: 162 CALH----AVDR-ANIKFDDVVVLAGAGPLGL 188

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 18 RAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFP 71
          RAA+ T  G+P   L I EV    P + EV VR   + + + D+  W ++    +    P
Sbjct: 2  RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
           I G EA+GVV++VGE V G+  G  V
Sbjct: 60 AIGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 17  CRAAIATAPGEPL----VIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFP 67
            +A + T  GEP     +    I  P   +EV V+++   +  +D+      +       
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
              P + G+E +G V  VG  V  +  GD VIP 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPL 94

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 45/198 (22%), Positives = 72/198 (36%), Gaps = 54/198 (27%)

Query: 17  CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV---FP 71
            +A +   PG    L ++E+ +  P + EV V++    L   D   WK+  +      +P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVD---WKVIAWGPPAWSYP 57

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            + G +  GVV +VG  V G   GD V  H                              
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRVAYH------------------------------ 87

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                S  +              SF+EYTV+D   V+ +  ++    A  L C   T   
Sbjct: 88  ----ASLARG------------GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQ 131

Query: 192 AAWRTANVEVGSTVVIFG 209
           A ++   +E G T++I G
Sbjct: 132 ALFKKLRIEAGRTILITG 149

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 19/176 (10%)

Query: 42  HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IP 100
           ++V V+I+   +CHSD+   K     + +P I GHE +G+   VG+NV    EGD V + 
Sbjct: 32  NDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG 91

Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD-LRGETIHHFVSVSSFSEY 159
             +  C  C  C     N C    F  +        SR  D  R +          +S+ 
Sbjct: 92  VIIGSCQSCESCNQDLENYCPKVVFTYN--------SRSSDGTRNQ--------GGYSDV 135

Query: 160 TVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 214
            V+D   V+ +   +P +  A LL  G++      +     E G  + + GLG +G
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLG 191

Length = 375

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 18 RAAIATAPGEPLVI--DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
          +A      G P V+  ++V V  P   EV VR     +   D  F +   +P   P +LG
Sbjct: 1  KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF-RSGLYPLPLPFVLG 59

Query: 76 HEAIGVVESVGENVDGVVEGDVV 98
           E  GVVE+VG  V G   GD V
Sbjct: 60 VEGAGVVEAVGPGVTGFKVGDRV 82

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 20  AIATAPGEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRI 73
            + T  GEP    L +  + + PP   EV VR++   +  SD+          P   P +
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP-LPAV 59

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIP 100
            G+E +GVV  VG  V G++ G  V+P
Sbjct: 60  PGNEGVGVVVEVGSGVSGLLVGQRVLP 86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 28/174 (16%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPH 101
           +V +++I   +CH+D+   K     + +P + GHE +G V  VG +V     GD+V +  
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            +  C EC  C+S     C+    +I  W   D  +  K  +G           F+   V
Sbjct: 96  IVGCCGECSPCKSDLEQYCNK---RI--WSYNDVYTDGKPTQG----------GFASAMV 140

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
           +D   VVK+   + P +A  L C            A V V S +  FGL   GL
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLC------------AGVTVYSPLSHFGLKQSGL 182

Length = 357

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 16/173 (9%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPH 101
           +V V+I+   +CHSD+   K +     +P + GHE +G+V  +G+NV    EGD V +  
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            +  C  C  C     N C    F  +  +  D T  +                +S+  V
Sbjct: 99  IVGSCKSCESCDQDLENYCPKMIFTYNS-IGHDGTKNY--------------GGYSDMIV 143

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 214
           +D   V++    +P +    L C   T           E G  + + GLG +G
Sbjct: 144 VDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLG 196

Length = 360

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 46/212 (21%), Positives = 69/212 (32%), Gaps = 69/212 (32%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVF 70
           R  + T  G P  L + E  +  P + EV V++  + +  +DV      +      P   
Sbjct: 2   REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFT- 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P   G++ +G V+++G  V G   GD V                                
Sbjct: 61  P---GYDLVGRVDALGSGVTGFEVGDRVAA------------------------------ 87

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
                                 V   +EY  LD  ++V V   V    A    C V   V
Sbjct: 88  -------------------LTRVGGNAEYINLDAKYLVPVPEGVDAAEA---VCLVLNYV 125

Query: 191 GAAW----RTANVEVGSTVVIFGL-GSIGLAV 217
             A+    R A V  G  V+I G  G +G A+
Sbjct: 126 -TAYQMLHRAAKVLTGQRVLIHGASGGVGQAL 156

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 7/86 (8%)

Query: 20 AIATAPGEPLVIDEVIVD----PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV---FPR 72
           + T  G P V+  + V+     P   EV V++   S+   D    +      +   FP 
Sbjct: 1  VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 73 ILGHEAIGVVESVGENVDGVVEGDVV 98
          I G +  G V +VG  V     GD V
Sbjct: 61 IPGMDFAGEVVAVGSGVTRFKVGDEV 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
          +A +   PG P  L + E+ +  P    V +R+    L  S++   +       FPR+LG
Sbjct: 2  KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 76 HEAIGVVESVGENVDGVVEGDVVI 99
           EA+G VE           G  V 
Sbjct: 62 IEAVGEVEEAPGG--TFTPGQRVA 83

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 18  RAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD----FPAVFP 71
           +A   +  G  + L + E  V  P   EV VR+   SL + D+    + +     P   P
Sbjct: 2   KAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLL---ILNGRYPPPVKDP 58

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD 105
            I   +  G V +VGE V     GD V+P F  +
Sbjct: 59  LIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPN 92

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 17/108 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWK--MKDFPAVFPRIL 74
           +A +     +  V D  +  P P   E  VR++   +C++D+  +K         FP + 
Sbjct: 2   KALVLDGGLDLRVED--LPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVP 54

Query: 75  GHEAIGVVESVGEN--VDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           GHE +G+VE   E   V   V G++ I      C  C  CR      C
Sbjct: 55  GHEFVGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC 97

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 58/216 (26%), Positives = 85/216 (39%), Gaps = 36/216 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDP--------PNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           R  +   PG+  V D  I  P           H V ++++ T++C SD    + +   A 
Sbjct: 4   RGVVYLGPGKVEVQD--IDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-TAP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
              +LGHE  G V   G +V+ +  GD+V   F   C  C  C+     +C      ++P
Sbjct: 61  TGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVC----LNVNP 116

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR---------AC 180
                    + D+ G        V   SEY ++  A     +    P+R           
Sbjct: 117 ARAGAAYG-YVDMGG-------WVGGQSEYVMVPYA---DFNLLKFPDRDQALEKIRDLT 165

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           +LS    TG   A  TA V  GSTV I G G +GLA
Sbjct: 166 MLSDIFPTGYHGAV-TAGVGPGSTVYIAGAGPVGLA 200

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           +E  V+    +V +   +PP RA L +   +T +      A   +G  V + GLG +GL 
Sbjct: 55  AERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLL 112

Query: 217 V 217
            
Sbjct: 113 A 113

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 18 RAAIATAPGEPLVIDEVIVDP-----PNSHEVRVRIICTSLCHSDVTFWKMK---DFPAV 69
          +A +    G+PL + E+ +       P   EV +++    +  SD+ F  +K        
Sbjct: 2  KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF--LKGQYGSTKA 59

Query: 70 FPRILGHEAIGVVESVGENVDG 91
           P   G E  G V + G     
Sbjct: 60 LPVPPGFEGSGTVVAAGGGPLA 81

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 54/215 (25%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWK----MKDFPAVFPR 72
           RAA+      PLV+ + + DP P   +V V+++   +C SD+        M D       
Sbjct: 2   RAAVFR--DGPLVVRD-VPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSL 58

Query: 73  -------ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125
                  +LGHE  G V   G   +                      + K G   ++ P 
Sbjct: 59  MDLGADIVLGHEFCGEVVDYGPGTER---------------------KLKVGTRVTSLPL 97

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---L 182
            +             +  G           ++EY +L  A +++V   +    A L   L
Sbjct: 98  LLCGQGASCGIGLSPEAPG----------GYAEYMLLSEALLLRVPDGLSMEDAALTEPL 147

Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           + G+      A R A +  G   ++ G G IGLAV
Sbjct: 148 AVGLH-----AVRRARLTPGEVALVIGCGPIGLAV 177

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 38 PPNSHEVRVRIICTSLCHSDVTFWKM-KDFPAVF------PRILGHEAIGVVESVGENVD 90
               E+ VR+I  SLC S         D   V       P ILGHE  G +  VG+   
Sbjct: 23 EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQ 82

Query: 91 G 91
          G
Sbjct: 83 G 83

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 40  NSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96
           N++   V+I    +C SD+ ++   K+ +F    P +LGHE IG +     +  G+ EG 
Sbjct: 26  NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQ 83

Query: 97  VVIPHFLADCTECVGCRSKKGNLCSAFPF 125
            V  +    C  C  C S   N C+   F
Sbjct: 84  TVAINPSKPCGHCKYCLSHNENQCTTMRF 112

Length = 343

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR--- 72
          RA      G    L I E     P  ++V +++    +  +D    + K  P   P    
Sbjct: 3  RAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP---PPGSS 59

Query: 73 -ILGHEAIGVVESVGENVDGVVEGDVVI 99
           ILG E  G VE VG +V    EGD V+
Sbjct: 60 EILGLEVAGYVEDVGSDVKRFKEGDRVM 87

Length = 334

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 18 RAAIATAPGEP--LVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRI 73
          +A +   PG P  L + EV   P P   EV +R+    +  +D+   +     P     I
Sbjct: 2  KAIVIKEPGGPEVLELGEV-PKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 74 LGHEAIGVVESVGENVDGVVEGDVV 98
          LG E  GVV +VG  V G   GD V
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 28  PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL-GHEAIGVVESVG 86
           PL   E  V  P   E+ VR+    +C +D+   +  D P   PR+  GHE +G V   G
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSE-GDLPVHRPRVTPGHEVVGEVAGRG 72

Query: 87  ENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSA 122
            +  G   GD V I      C  C  CR    NLC A
Sbjct: 73  ADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPA 109

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 33/151 (21%), Positives = 49/151 (32%), Gaps = 23/151 (15%)

Query: 73  ILGHEAIGVVESVGENVDGVVE------GDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
           +LGHE +G V ++        +      G  V+      C  C  CR      C      
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCD----- 55

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCG 185
                     S  K         +     ++E+  L     +V V   +P   A    C 
Sbjct: 56  ----------SLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
            +T V AA   A    G  V++ G G +GL 
Sbjct: 106 TAT-VMAALEAAGDLKGRRVLVVGAGMLGLT 135

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 31 IDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89
          ID  +  P P   ++ VR+   S+   D             P+ILG +A GVVE+VG  V
Sbjct: 19 IDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEV 78

Query: 90 DGVVEGDVV 98
               GD V
Sbjct: 79 TLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
          RA      G P  L + ++ V  P   EV VR+  + +   D                + 
Sbjct: 2  RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61

Query: 76 H-EAIGVVESVGENVDGVVEGDVV 98
            +  GVVE+VGE VDG+  GD V
Sbjct: 62 GSDGAGVVEAVGEGVDGLKVGDRV 85

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 32/158 (20%)

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
                    FPRI G + +G V +VGE VD    G+ V+                     
Sbjct: 68  AGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVL--------------------- 106

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
                 + P +         D+    I        F+EYTV+   +   V+  +      
Sbjct: 107 ------VDPSIRDPPEDDPADID--YIGSERD-GGFAEYTVVPAENAYPVNSPLSDVELA 157

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV 217
              C  ST      R A V  G TV++ G  G +G A+
Sbjct: 158 TFPCSYSTAENMLER-AGVGAGETVLVTGASGGVGSAL 194

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 39 PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI-LGHEAIGVVESVGENVDGVVEGDV 97
          P   EV V+     +  SD+ F   +  P V P    G E +G V +VGE V     GD 
Sbjct: 28 PGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDA 87

Query: 98 V 98
          V
Sbjct: 88 V 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	217
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.98
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.97
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.97
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.97
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.97
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.97
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.97
PRK10083	339	putative oxidoreductase; Provisional	99.97
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.97
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.97
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.97
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.97
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.96
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.96
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.96
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.96
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.96
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.96
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.96
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.96
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.96
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.96
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.96
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.95
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.95
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.95
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	99.95
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.95
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.95
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.95
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.95
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.95
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.95
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.95
PLN02702	364	L-idonate 5-dehydrogenase	99.95
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.95
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.95
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.95
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.94
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.94
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.94
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.94
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.94
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.94
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.94
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.94
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.94
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.94
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.93
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.93
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	99.93
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.93
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.92
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.92
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.92
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.91
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.91
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.91
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.91
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.91
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.9
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.9
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.9
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.9
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.9
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.9
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.89
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.89
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.89
PTZ00354	334	alcohol dehydrogenase; Provisional	99.89
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.89
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.89
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.88
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.88
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.88
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.88
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.88
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.88
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.88
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.88
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.88
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.87
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.87
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.87
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.86
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.85
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.85
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.84
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.84
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.84
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.83
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.82
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.82
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.81
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.81
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.8
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.8
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.77
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.72
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.7
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.52
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.31
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.19
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	95.29
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.26
PTZ00414	100	10 kDa heat shock protein; Provisional	91.1
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	88.27
PRK00364	95	groES co-chaperonin GroES; Reviewed	87.47
PRK14533	91	groES co-chaperonin GroES; Provisional	86.21
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	83.71
PF00166	93	Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR0208	81.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	80.75

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=4.1e-46  Score=314.72  Aligned_cols=181  Identities=33%  Similarity=0.491  Sum_probs=170.8

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |++|||+++.+++++++++|++.|+|+++||||+|+|+|||++|++.+.|.++...+|+++|||++|+|+++|++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            46799999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCEEee-ecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        94 vGd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      +||||.+ +...+|+.|++|++|++++|++...   .|++.+|                   +||||+++++++++++|+
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~  138 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE  138 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence            9999999 8889999999999999999999776   6666776                   999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++||.+.|+..|.|+++ +..+++||++|+|+|+|++|.+|
T Consensus       139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~a  182 (339)
T COG1064         139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMA  182 (339)
T ss_pred             CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHH
Confidence            999999999999999999965 66999999999999999988653

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5.9e-44  Score=297.24  Aligned_cols=201  Identities=46%  Similarity=0.768  Sum_probs=193.8

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |++||++..+.++||+++|+.+++|+++|||||+.|+|+||+|...++|.++.. +|.++|||++|+|++||+.|+.+++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            458999999999999999999999999999999999999999999999999886 9999999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|+..+...|++|.+|++|+.++|...+...+.|...||+.+++ .++.+.+|+.|.++|+||.++++.++++++++.
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence            9999999999999999999999999999888888899999999998 899999999999999999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++.++++.|...|.+.++.+.+++++|++|.|+|.|++|++|
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaa  201 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAA  201 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHH
Confidence            9999999999999999999999999999999999999999864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-43  Score=288.63  Aligned_cols=206  Identities=55%  Similarity=0.928  Sum_probs=195.8

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      .+.+.++||++.+++++||.++|+.+++|+.+||+||++++++||+|.+.++|..+...||.|+|||++|+|+++|+.|+
T Consensus         2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~   81 (375)
T KOG0022|consen    2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT   81 (375)
T ss_pred             CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence            35778999999999999999999999999999999999999999999999999987788999999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++++||+|+..+...|++|.+|+++..|+|...+.+.+.+.. .||.++|. ..+++.|||.+.++|+||.+++...+++
T Consensus        82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEe
Confidence            999999999999999999999999999999999888655555 59999999 8999999999999999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      |++..+++.+++|.|.+.|+|.|++..+++++|+++.|+|.|++|+++
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav  208 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAV  208 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHH
Confidence            999999999999999999999999999999999999999999999863

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.3e-41  Score=277.53  Aligned_cols=178  Identities=31%  Similarity=0.489  Sum_probs=162.7

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCC---CCCCeeeeecceEEEEEeCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~---~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ..|+|+++...++ +++++.|.|++ .|+||+|+++++|||++|+|.+......   .+.|+++|||.+|+|+++|+.|+
T Consensus         3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            4589999999999 99999999988 8999999999999999999999765433   46899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      +|++||||++.+..+|+.|++|++|++|+|++..+-   +.. .+|                   ++++|++.+++++++
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G-------------------~la~y~~~~~dfc~K  139 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG-------------------TLAEYYVHPADFCYK  139 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC-------------------ceEEEEEechHheee
Confidence            999999999999999999999999999999999874   222 344                   999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +|++++++++|++. +++++++ +.+++++++|++|||+|||++|+++
T Consensus       140 LPd~vs~eeGAl~e-PLsV~~H-Acr~~~vk~Gs~vLV~GAGPIGl~t  185 (354)
T KOG0024|consen  140 LPDNVSFEEGALIE-PLSVGVH-ACRRAGVKKGSKVLVLGAGPIGLLT  185 (354)
T ss_pred             CCCCCchhhccccc-chhhhhh-hhhhcCcccCCeEEEECCcHHHHHH
Confidence            99999999999998 8999999 5689999999999999999999753

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-39  Score=266.62  Aligned_cols=191  Identities=29%  Similarity=0.418  Sum_probs=169.5

Q ss_pred             CCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      ...|.+.++|.+..+++.  +++.++++|+++++||+|+++++|||++|++.+.+.++..++|.++|||++|+|+++|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            457899999999998884  667999999999999999999999999999999999988899999999999999999999


Q ss_pred             CCCCCCCCEEee-ecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           89 VDGVVEGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        89 v~~~~vGd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      |++|++||+|-+ +...+|..|++|+++.+++|++..++ ..|...||...+              |+|++|+++++.++
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DGt~~~--------------ggf~~~~~v~~~~a  148 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDGTITQ--------------GGFQEYAVVDEVFA  148 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCCCCcc--------------CccceeEEEeeeeE
Confidence            999999999955 44678999999999999999975543 356666662222              48999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++||++++.+.||-+.|+..|.|.++ ...++.||++|-|.|+|++|.++
T Consensus       149 ~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~a  197 (360)
T KOG0023|consen  149 IKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMA  197 (360)
T ss_pred             EECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHH
Confidence            99999999999999999999999954 66788899999999997788653

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.8e-36  Score=262.06  Aligned_cols=200  Identities=49%  Similarity=0.783  Sum_probs=166.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++...+++++++++|.|+|+++||+|||++++||++|++++.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            78999988877799999999999999999999999999999999988765456789999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++.+..+|+.|.+|+.|+.++|++.......|...+|..++. ..|.+.++..+.|+|+||++++.+.++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            99998888999999999999999987543212233222221111 01122223223469999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++.+.+++.|||+++.+..++++|++|||+|+|++|+++
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a  201 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSV  201 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence            99999999999999988788899999999999999999763

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=8.8e-36  Score=258.73  Aligned_cols=201  Identities=53%  Similarity=0.972  Sum_probs=167.4

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      +|||+++.++++++++++++.|+|+++||+||+.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            68999999887779999999999999999999999999999999998876555678999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCC-CcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ-TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G-~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+..+|+.|..|..+.+++|++.......|....+ ...+. ..|...+++.+.|+|+||++++.+.++++|+++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            9999999999999999999999999886532112221110 00000 112222333344699999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++++.+++.|+|+++++..++++|++|||+|+|++|+++
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a  203 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAV  203 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHH
Confidence            9999999998999999988888899999999999999999753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.5e-35  Score=258.61  Aligned_cols=205  Identities=54%  Similarity=0.955  Sum_probs=166.7

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      .|++|||+++.++++++.+++++.|.|+++||+||+++++||++|++.+.|.+. ...+|.++|||++|+|+++|+++++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   86 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED   86 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence            667899999999887689999999999999999999999999999999988753 2357899999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCC-CCCCCCCcccccC-CCceeeeccccceeeeeEEeccccEEE
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~-g~~~~G~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      |++||+|++.+..+|+.|.+|+.+.+++|++....... ....+|...++.. .+...+++...|+|+||++++.+.+++
T Consensus        87 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~  166 (381)
T PLN02740         87 LKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVK  166 (381)
T ss_pred             CCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEE
Confidence            99999999999999999999999999999886532100 0000110000000 000112222346999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +|+++++++++.+.+++.|||+++++.+++++|++|||+|+|++|+++
T Consensus       167 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a  214 (381)
T PLN02740        167 IDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAV  214 (381)
T ss_pred             CCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            999999999999999999999988788899999999999999999753

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.1e-35  Score=256.42  Aligned_cols=201  Identities=49%  Similarity=0.836  Sum_probs=167.6

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      +|||+++.+.+++++++++|.|+|+++||+||+++++||++|++.+.+.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            58999988887779999999999999999999999999999999998876555688999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+..+|+.|.+|+.++++.|++.....+.|...+|..++. .+|...+++.+.|+|+||++++.+.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            999998889999999999999999987643222232222211111 1122223333446999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++.+.+++.|||+++++..++++|++|||+|+|++|+++
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a  202 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAV  202 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence            999999998999999988788899999999999999999763

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.6e-35  Score=254.03  Aligned_cols=199  Identities=40%  Similarity=0.641  Sum_probs=161.7

Q ss_pred             eeeEEeccCCC--------CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        17 ~~a~~~~~~~~--------~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      |||+++.+++.        .+++++++.|+|+++||+|||.+++||++|++++.+.++. .+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence            78999988653        3899999999999999999999999999999999887543 57899999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  168 (217)
                      +++|++||+|++.+...|+.|..|+.|++++|++.......|...+|..++.. .+....+..+.|+|+||++++.+.++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRL-RGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccc-cCcccccccCcccceeeEEecccceE
Confidence            99999999999888889999999999999999876432222222221111100 00001111223599999999999999


Q ss_pred             EcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       169 ~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++|+++++++|+.+.+++.|||.++.+..++++|++|||+|+|++|+++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a  207 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSA  207 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            9999999999999998999999988788899999999999999999753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-34  Score=250.44  Aligned_cols=188  Identities=24%  Similarity=0.360  Sum_probs=161.0

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ...|++++++.+.+..+.+++.+++.|+|+++||+|||.+++||++|++++.+.++...+|.++|||++|+|+++|++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~   86 (360)
T PLN02586          7 EEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVK   86 (360)
T ss_pred             hhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCC
Confidence            45788888888888766699999999999999999999999999999999887654446789999999999999999999


Q ss_pred             CCCCCCEEeeec-ccCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc
Q 027867           91 GVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (217)
Q Consensus        91 ~~~vGd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  165 (217)
                      +|++||+|++.+ ..+|+.|.+|+.|.+++|++..+..    ..|...+                   |+|+||++++.+
T Consensus        87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~  147 (360)
T PLN02586         87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY-------------------GGYSDMIVVDQH  147 (360)
T ss_pred             ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCC-------------------CccceEEEEchH
Confidence            999999998654 3579999999999999998765320    0122223                   399999999999


Q ss_pred             cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       166 ~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      .++++|+++++++++.+.+++.|+|+++.+...+++|++|||.|+|++|+++
T Consensus       148 ~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a  199 (360)
T PLN02586        148 FVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVA  199 (360)
T ss_pred             HeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHH
Confidence            9999999999999999999999999977666667899999999999999763

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=3.2e-34  Score=248.80  Aligned_cols=199  Identities=50%  Similarity=0.913  Sum_probs=166.5

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      +++||+++.+.+++++++++|.|.++++||+||+++++||++|++.+.|.++ ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            3589999988777799999999999999999999999999999999988754 467899999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|++.+..+|+.|+.|..|.+++|++.... ..|...++...+. ..+...+++.+.|+|+||++++.+.++++|+++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFT-CKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCccccc-cCCcccccccccccceeeEEEchhheEECCCCC
Confidence            99999988899999999999999999886532 1233332211111 012222223334699999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++.+.+++.|||+++.+..++++|++|||+|+|++|++
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~  199 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLS  199 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence            999999999999999998778889999999999998999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=4.6e-34  Score=244.92  Aligned_cols=178  Identities=28%  Similarity=0.431  Sum_probs=157.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++. +++++++.|+|+++||+||+.+++||++|++.+.+.+.. ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            78999998776 999999999999999999999999999999988765432 2357899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+...|+.|+.|+.|++++|.+...  ..|...+|                   +|+||++++.+.++++|++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~  138 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS  138 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence            999999999999999999999999987653  13333344                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++|+.+.+++.|||+++ +..++++|++|||+|+|++|+++
T Consensus       139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~  179 (339)
T cd08239         139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGA  179 (339)
T ss_pred             HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            999999999999999965 66789999999999999999753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.2e-33  Score=246.39  Aligned_cols=197  Identities=49%  Similarity=0.928  Sum_probs=158.3

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      .|||+++.++++.+++++++.|+|+++||+|||++++||++|++.+.+..   .+|.++|||++|+|+++|+++++|++|
T Consensus        12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~G   88 (378)
T PLN02827         12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEKG   88 (378)
T ss_pred             eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCCC
Confidence            49999999887669999999999999999999999999999999887642   467899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+..+|+.|.+|+++.+++|++.... ..|... ++...|. ..|....++...|+|+||++++++.++++|+++
T Consensus        89 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         89 DHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCCC
Confidence            9999998889999999999999999875321 001000 0000000 000000000112599999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++.+.+++.++|+++++..++++|++|||+|+|++|+++
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~  209 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSV  209 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHH
Confidence            9999999888989999877777889999999999999999753

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.9e-34  Score=246.44  Aligned_cols=191  Identities=34%  Similarity=0.590  Sum_probs=160.4

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      +|||+++.++++++++++++.|+|+++||+|||.+++||++|++.+.|.++. .+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND-EFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc-cCCcccccceEEEEEEeCCCCcccCCC
Confidence            5899999999888999999999999999999999999999999998886543 578999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+...|+.|..|..|+.++|....... ..+. .+|         .......+.|+|+||+.++.+.++++|+++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~  149 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA  149 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cccccccccccccceEEEehhheEECCCCC
Confidence            99999999999999999999999997532110 0000 001         000000123599999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++.+.+++.|+|.++.+..++++|++|||+|+|++|+++
T Consensus       150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a  192 (358)
T TIGR03451       150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAA  192 (358)
T ss_pred             ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            9999999998999999877788899999999999999999753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=7.6e-34  Score=248.89  Aligned_cols=182  Identities=27%  Similarity=0.372  Sum_probs=150.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCC-------CCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~-------~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      |||+++.++++ ++++++|.|+|+       ++||||||+++|||++|++++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V   80 (393)
T TIGR02819         3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV   80 (393)
T ss_pred             ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence            89999999887 999999999874       68999999999999999999988653 3578999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc-
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-  165 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~---~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  165 (217)
                      ++|++||||++.+...|+.|++|++|++++|++.....   ..|....|               ...|+|+||++++.. 
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~~  145 (393)
T TIGR02819        81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVPYAD  145 (393)
T ss_pred             ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEechhh
Confidence            99999999999999999999999999999998753210   01110000               001499999999964 


Q ss_pred             -cEEEcCCCCCc----cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          166 -HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       166 -~~~~~p~~~~~----~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                       .++++|++++.    +.++.+.+++.++|+++ +..++++|++|||.|+|++|++
T Consensus       146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~  200 (393)
T TIGR02819       146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLA  200 (393)
T ss_pred             CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence             79999998653    34566777899999965 5688999999999988999975

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7e-33  Score=238.44  Aligned_cols=180  Identities=22%  Similarity=0.355  Sum_probs=148.3

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhh-cCCC--CCCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~-g~~~--~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ..+|+++++++++ +++++++.| ++++||||||++++||++|++++. +.+.  ...+|.++|||++|+|+++  ++++
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            4588999999988 999999987 689999999999999999999875 3322  2357899999999999999  7889


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|++.+..+|+.|++|+.|.+++|++...   .|....              +....|+|+||++++++.++++|
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P  141 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYP  141 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccc--------------cCCCCCceeeeEEechHHeEECC
Confidence            9999999999999999999999999999988653   121000              00012499999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++++++. .++++||+++ +.....+|++|||+|+|++|+++
T Consensus       142 ~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~a  185 (343)
T PRK09880        142 EKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLI  185 (343)
T ss_pred             CCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            99998876644 4788999965 55566789999999999999763

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=5.1e-33  Score=240.17  Aligned_cols=180  Identities=28%  Similarity=0.381  Sum_probs=144.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCe-eeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~-ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |++++++.++...++++.+.|.++++||+|||.++|||++|++.+.+..+....+. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            56777777775344777877778899999999999999999999999866655555 99999999999999 77789999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCC--CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE-cCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI--SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDP  172 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-~p~  172 (217)
                      |||++.+..+|+.|.+|++|.+++|++.++..  ..+...+|                   +|+||+.+|.++.+. +|+
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~pd  140 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKLPD  140 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecCCC
Confidence            99999999999999999999999999665321  11111334                   999999999765555 578


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++ ..+++++..+++++|++.......+++++|+|+|+|++|+++
T Consensus       141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla  184 (350)
T COG1063         141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLA  184 (350)
T ss_pred             CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHH
Confidence            87 455555556999998864455556667799999999999874

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.7e-32  Score=236.64  Aligned_cols=202  Identities=47%  Similarity=0.817  Sum_probs=166.5

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      +-.+|||+++..++++++++++|.|++.++||+||+++++||++|++.+.|.+. ..+|.++|||++|+|+++|++++.|
T Consensus         4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence            345699999988877799999999999999999999999999999999988753 3578899999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|++.+..+|++|.+|..++.+.|+........|...++..+++ -.|.+.+++.+.|+|+||++++.+.++++|+
T Consensus        83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeCCC
Confidence            999999998889999999999999999987543111122111111111 1122333443457999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++++++.+++.|||+++.+..++++|++|||+|+|++|++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~  205 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLS  205 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            99999999999999999998888899999999999988999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-32  Score=234.94  Aligned_cols=174  Identities=25%  Similarity=0.358  Sum_probs=151.4

Q ss_pred             EEeccCCC----CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           20 AIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        20 ~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      +.+..++.    .++++++|.|+|+++||+||+++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG   81 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence            45555543    38899999999999999999999999999999998876544457899999999999999999999999


Q ss_pred             CEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+. .+|+.|++|..|++++|++..+   .|...+|                   +|+||++++.+.++++|+++
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~  139 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGY  139 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCC
Confidence            99987654 5799999999999999988654   3333344                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++.+.+++.|||+++ +.+++++|++|||+|+|++|++
T Consensus       140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~  180 (329)
T TIGR02822       140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHL  180 (329)
T ss_pred             CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHH
Confidence            9999998889999999976 5688999999999999999865

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=4.5e-32  Score=234.40  Aligned_cols=178  Identities=25%  Similarity=0.349  Sum_probs=143.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC---CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~---~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++...+.+++++++|.|+|+++||||||++++||++|++.+.|.++.   ..+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            588888765434999999999999999999999999999999999887532   246799999999999999999 9999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      +||+|+..+...|+.|.+|++|++++|+..... ..|.. .+                   |+|+||++++.+.++++|+
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~-------------------G~~aey~~~~~~~~~~~P~  139 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH-------------------GFMREYFVDDPEYLVKVPP  139 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------------ccceeEEEeccccEEECCC
Confidence            999999988889999999999999999875431 11211 22                   4999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHH------HhcCCCCCCEEEEEcCChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAW------RTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~------~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++ +.+ .+..++.+++.++.      +..++++|++|||+|+|++|++|
T Consensus       140 ~~~-~~a-~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a  188 (355)
T cd08230         140 SLA-DVG-VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLA  188 (355)
T ss_pred             CCC-cce-eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHH
Confidence            999 444 33345555444322      22346789999999999999763

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.1e-32  Score=236.03  Aligned_cols=179  Identities=25%  Similarity=0.360  Sum_probs=148.1

Q ss_pred             EEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEe
Q 027867           20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI   99 (217)
Q Consensus        20 ~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~   99 (217)
                      ++..+..+.+++.+++.|.|+++||+|||.+++||++|++++.|.+....+|.++|||++|+|+++|+++++|++||+|+
T Consensus        10 ~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~   89 (375)
T PLN02178         10 WAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVG   89 (375)
T ss_pred             EEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEE
Confidence            33444434488899999999999999999999999999999988754335689999999999999999999999999998


Q ss_pred             eeccc-CCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867          100 PHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus       100 ~~~~~-~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      +.+.. +|+.|.+|++|++++|++..+..    ..|...+                   |+|+||++++++.++++|+++
T Consensus        90 ~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~l  150 (375)
T PLN02178         90 VGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDGL  150 (375)
T ss_pred             EcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCCC
Confidence            66554 69999999999999999865320    0121123                   499999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcC-CCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~-~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++.+.++..|+|+++.+... .++|++|||.|+|++|+++
T Consensus       151 s~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~a  194 (375)
T PLN02178        151 PSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIA  194 (375)
T ss_pred             CHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHH
Confidence            999999999999999996644332 3689999999999999753

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.9e-32  Score=233.67  Aligned_cols=184  Identities=24%  Similarity=0.367  Sum_probs=158.1

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      +.++|+++..+++++++++++.|+|+++||+||+++++||++|++.+.+.+....+|.++|||++|+|+++|+++++|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~   87 (357)
T PLN02514          8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_pred             ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence            45899999999988999999999999999999999999999999998887644457899999999999999999999999


Q ss_pred             CCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           95 GDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        95 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ||+|++.+. ..|+.|.+|++|++++|++..+...    .|...+                   |+|+||++++.+.+++
T Consensus        88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~  148 (357)
T PLN02514         88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQ-------------------GGFASAMVVDQKFVVK  148 (357)
T ss_pred             CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCC-------------------CccccEEEEchHHeEE
Confidence            999986554 3699999999999999987643200    111112                   4999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +|+++++++++.+++++.|||+++.+....++|++|||+|+|++|+++
T Consensus       149 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~a  196 (357)
T PLN02514        149 IPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMG  196 (357)
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHH
Confidence            999999999999999999999977555566899999999889999753

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.98  E-value=6.8e-32  Score=232.37  Aligned_cols=172  Identities=23%  Similarity=0.221  Sum_probs=141.7

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC----CCCCeeeeecceEEEEEeCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~----~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      |..|+++++++++ ++++|++.|. +++||||||+++|||++|++++.|.+..    ..+|.++|||++|+|+++|.+  
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--   76 (341)
T cd08237           1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--   76 (341)
T ss_pred             CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence            3468999999997 9999999995 9999999999999999999999887532    357999999999999998875  


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      +|++||+|++.+..+|+.| .|  +..++|.+..+   .|...+|                   +|+||++++.++++++
T Consensus        77 ~~~vGdrV~~~~~~~~~~~-~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  131 (341)
T cd08237          77 TYKVGTKVVMVPNTPVEKD-EI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL  131 (341)
T ss_pred             ccCCCCEEEECCCCCchhc-cc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence            7999999999887777743 45  35577876543   2222334                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHH--hcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++|+++. +++++|+++.+  ...+++||+|||+|+|++|++
T Consensus       132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~  178 (341)
T cd08237         132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYI  178 (341)
T ss_pred             CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence            9999999888665 88889987643  345789999999999999975

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.97  E-value=4e-31  Score=229.43  Aligned_cols=199  Identities=44%  Similarity=0.777  Sum_probs=174.0

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      +||+++.+.+.++++++++.|.++++||+||+.++++|++|++.+.+.+. ...|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            47888888876699999999999999999999999999999998887654 35678999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++.+..+|+.|.+|+.+.+++|......+..|...+|+..|.. +|.+.+|+.+.|+|++|+.++.+.++++|+++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~  158 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL  158 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence            999998889999999999999999887665555555566555553 5566667777789999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++.+.+++.+||.++.+.+++++|++|||+|+|++|+++
T Consensus       159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a  199 (365)
T cd05279         159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSV  199 (365)
T ss_pred             HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            99999988999999988888899999999999889998763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.97  E-value=1.2e-31  Score=229.33  Aligned_cols=155  Identities=30%  Similarity=0.345  Sum_probs=138.9

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcC-CCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~-~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+.+.+  ++++|+|.|+|+++||||||+|++||+.|++.+.|. .+..++|+++|.|++|+|+++|++|++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            688999888766  888999999999999999999999999999999987 33356899999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+... .                        .+  .+                   |+|+||+++|++.++++|++
T Consensus        81 ~GdrV~~~~-~------------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~~  114 (326)
T COG0604          81 VGDRVAALG-G------------------------VG--RD-------------------GGYAEYVVVPADWLVPLPDG  114 (326)
T ss_pred             CCCEEEEcc-C------------------------CC--CC-------------------CcceeEEEecHHHceeCCCC
Confidence            999998642 0                        00  22                   49999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++++||++++++.|||+++.+..++++|++|||+|+ |+||++|
T Consensus       115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a  159 (326)
T COG0604         115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA  159 (326)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence            9999999999999999999988899999999999997 9999754

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.97  E-value=5.2e-31  Score=227.33  Aligned_cols=174  Identities=26%  Similarity=0.465  Sum_probs=150.3

Q ss_pred             EEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcC-CCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEE
Q 027867           20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV   98 (217)
Q Consensus        20 ~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~-~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V   98 (217)
                      +++.+++++++++++|.|.|+++||+||++++++|++|++.+.+. .....+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            456677766899999999999999999999999999999887443 2234678999999999999999999887 99999


Q ss_pred             eeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC------
Q 027867           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------  172 (217)
Q Consensus        99 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~------  172 (217)
                      ++.+..+|+.|..|+.|.+++|.....   .|...+|                   +|+||++++.+.++++|+      
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~  138 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA  138 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence            999999999999999999999977543   2333334                   999999999999999999      


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++++.+.+++.|+|+++ +..++++|++|||+|+|++|+++
T Consensus       139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a  182 (349)
T TIGR03201       139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYM  182 (349)
T ss_pred             CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            899999888888999999965 56889999999999999999753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.97  E-value=2.1e-30  Score=224.92  Aligned_cols=200  Identities=37%  Similarity=0.642  Sum_probs=161.9

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |+|||+++.+++.++++++.+.|++.++||+||+.++++|++|++.+.+.++ ...|.++|||++|+|+++|+++.+|++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4689999998766699999999999999999999999999999999888654 346789999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceee-eccccceeeeeEEeccccEEEcCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      ||+|++.+. .|+.|+.|..+..++|.........|...+|...+.+..+.+++ ++...|+|++|+.++.+.++++|++
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            999998764 89999999999999997654321122222221111111111110 1223469999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++.+++++.|||.++.+..++++|++|||+|+|++|++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~  201 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLA  201 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHH
Confidence            9999999999999999998878889999999999988998875

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=224.41  Aligned_cols=175  Identities=27%  Similarity=0.454  Sum_probs=148.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++++++. ++++++|.|.| .++||+|||+++++|++|++.+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            68999998886 99999999998 58999999999999999987542211 11357899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+..+|+.|++|..|.+++|.+...   .|...+|                   +|+||+.++.+.++++|++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s  136 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP  136 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence            999999999999999999999999976543   2333344                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++++. .+.++|++ ++...+++|++|||+|+|++|+++
T Consensus       137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~  176 (347)
T PRK10309        137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLA  176 (347)
T ss_pred             HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHH
Confidence            99998774 55667875 567788999999999989999753

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.97  E-value=6e-30  Score=221.28  Aligned_cols=184  Identities=30%  Similarity=0.402  Sum_probs=156.5

Q ss_pred             eeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC------
Q 027867           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------   91 (217)
Q Consensus        18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~------   91 (217)
                      ||+++.++++.+++++++.|.|+++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|++++.      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            78999998866999999999999999999999999999999998887653467889999999999999999986      


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCcccccCCCceeeeccccceeeeeEEeccc-cEEE
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVK  169 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~  169 (217)
                      |++||+|++.+..+|+.|..|+.+..++|.+....   |...+ +.             ....|+|+||++++++ .+++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~  145 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD-------------PHLSGGYAEHIYLPPGTAIVR  145 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC-------------CCCCcccceEEEecCCCceEE
Confidence            99999999999899999999999999999886543   21110 00             0012499999999986 7999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +|++++.+.++.+++++.|||.++.+....++|++|||+|+|++|+++
T Consensus       146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~  193 (361)
T cd08231         146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYA  193 (361)
T ss_pred             CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            999999999998888999999987666666799999999889998753

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK10083 putative oxidoreductase; Provisional

Probab=99.97  E-value=7.7e-30  Score=218.49  Aligned_cols=175  Identities=26%  Similarity=0.502  Sum_probs=153.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+.++...+|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            68999998886 99999999999999999999999999999998888765445689999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++.+...|+.|.+|..+++++|.+..+   .+...+                   |+|+||+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~  137 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAIAD  137 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCCCH
Confidence            99999999999999999999999976543   122223                   38999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++. ..++.++|. +.+..++++|++|||+|+|++|++
T Consensus       138 ~~a~~-~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~  175 (339)
T PRK10083        138 QYAVM-VEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLT  175 (339)
T ss_pred             HHHhh-hchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHH
Confidence            88764 457788886 667889999999999999999875

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.97  E-value=1.4e-29  Score=221.35  Aligned_cols=193  Identities=27%  Similarity=0.384  Sum_probs=157.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCC-CCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.++++ +++++++.|.|. ++||+||+.+++||++|+..+.|.++..++|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            68999998866 999999999984 9999999999999999999998887655678999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCCcccccCCCceeeec--cccceeeeeEEeccc--cEEEc
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGETIHHF--VSVSSFSEYTVLDIA--HVVKV  170 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g~~~~G~~~~~~~~~~~~~~~--~~~g~~a~~~~v~~~--~~~~~  170 (217)
                      |+|++.+...|+.|.+|..+++++|++..... ..+.  .|....+ ..+  ..++  ...|+|++|++++.+  .++++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~--~~~~~~~~~g~~~~~~~v~~~~~~~~~l  154 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKL--YGHAGAG-IFG--YSHLTGGYAGGQAEYVRVPFADVGPFKI  154 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccc--ccccccc-ccc--cccccCCCCCeeEEEEEcccccCeEEEC
Confidence            99999988889999999999999998765321 0000  0000000 000  0000  013599999999987  89999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++++.++..+.|||+++ +..++.+|++|||+|+|++|++
T Consensus       155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~  199 (386)
T cd08283         155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLF  199 (386)
T ss_pred             CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHH
Confidence            99999999999998999999976 7889999999999988988865

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.97  E-value=1.6e-29  Score=217.83  Aligned_cols=176  Identities=30%  Similarity=0.464  Sum_probs=151.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC---C--------CCCCCeeeeecceEEEEEe
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---F--------PAVFPRILGHEAIGVVESV   85 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~--------~~~~p~ilG~e~~G~Vv~v   85 (217)
                      |||+++.++++ +++++++.|+|.++||+||+.++++|++|++.+.+..   +        ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            68999998876 9999999999999999999999999999988765321   1        0136889999999999999


Q ss_pred             CCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEecc
Q 027867           86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (217)
Q Consensus        86 G~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  164 (217)
                      |+++++|++||+|+..+..+|+.|.+|+++..++|....+   .|.. .+                   |+|++|++++.
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~a~~~~~~~  137 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------------GGFAEYVVVPA  137 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------------CceeeEEEech
Confidence            9999999999999999888999999999999999976542   2221 12                   39999999999


Q ss_pred             ccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       165 ~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +.++++|+++++++++++ .++.|||.++ +..++++|++|||+|+|++|+++
T Consensus       138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a  188 (351)
T cd08233         138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLT  188 (351)
T ss_pred             HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            999999999999998876 5788999976 78889999999999989888753

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.97  E-value=1.8e-29  Score=217.60  Aligned_cols=179  Identities=26%  Similarity=0.283  Sum_probs=154.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++ +++++++.|.++++||+||++++++|++|++.+.+.+.....|.++|||++|+|+++|+++++|++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            78999999887 89999999999999999999999999999998877655446689999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCCC
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV  174 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~~  174 (217)
                      +|++.+..+|+.|..|..|.++.|.+.......+...+                   |+|+||++++.+  .++++|+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCC
Confidence            99998878999999999999999976531100111122                   499999999974  899999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++.++..+.|||++ .+..++++|++|||+|+|++|++
T Consensus       141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~  181 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLM  181 (351)
T ss_pred             CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHH
Confidence            999999998899999996 57788999999999988999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=2.6e-29  Score=215.22  Aligned_cols=177  Identities=27%  Similarity=0.435  Sum_probs=155.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.+++.++++++++.|+++++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            68999999855599999999999999999999999999999999888654445688999999999999999999999999


Q ss_pred             EEeeec-ccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        97 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      +|++.+ ...|+.|.+|..|.++.|....+   .|...+|                   ++++|+.++.+.++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~  138 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD  138 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence            998754 46799999999999999988764   2332233                   899999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++.+++++.|+|+++ +..++.++++|||+|+|++|++
T Consensus       139 ~~~aa~l~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~iG~~  178 (333)
T cd08296         139 AAEAAPLLCAGVTTFNAL-RNSGAKPGDLVAVQGIGGLGHL  178 (333)
T ss_pred             HHHhhhhhhhhHHHHHHH-HhcCCCCCCEEEEECCcHHHHH
Confidence            999999999999999976 4558999999999998999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.96  E-value=4.1e-29  Score=214.34  Aligned_cols=179  Identities=30%  Similarity=0.419  Sum_probs=157.7

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++. +++.++|.|.| .++||+||+.++++|++|+..+.+.++...+|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            58999998887 99999999999 89999999999999999999988877656678999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.+..+|+.|.+|..+...+|++...+...+...+                   |+|++|++++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID-------------------GGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCC-------------------CeeeEEEEecchhCeEEECCCC
Confidence            999999989999999999999999988654322222223                   499999999987  89999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++.+++++.|||+++ ...++++|++|||.|+|++|++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~  182 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLC  182 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHH
Confidence            99999999999999999976 7788999999999887888864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=1.2e-28  Score=209.65  Aligned_cols=177  Identities=36%  Similarity=0.556  Sum_probs=157.0

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++..++.++.++++|.|.+.++||+||++++++|++|++.+.+.++....|.++|||++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            68999987555599999999999999999999999999999999888765556688999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++.....|+.|++|..+..++|++...   .|....|                   +|++|++++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~  138 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD  138 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccc---cccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence            99999989999999999999999987522   3333334                   9999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++.+++++.|||+++.. .++.++++|||+|+ |++|++
T Consensus       139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~  178 (332)
T cd08259         139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIH  178 (332)
T ss_pred             HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHH
Confidence            9999999999999997655 88999999999998 899875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=210.96  Aligned_cols=177  Identities=31%  Similarity=0.434  Sum_probs=158.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++++++++++.|.++++||+||++++++|++|++...+.++...+|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            68999999988799999999999999999999999999999998888765556788999999999999999998899999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++....+|+.|++|..+..+.|.....   .|...+|                   +|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~  138 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD  138 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence            99998888999999999999999988654   3333344                   9999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      .+++.+.+++.++|+++.+. +++++++|||+|+ |.+|++
T Consensus       139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~  178 (334)
T PRK13771        139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIH  178 (334)
T ss_pred             HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHH
Confidence            99999999999999976554 8999999999998 888875

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.96  E-value=8.6e-29  Score=211.93  Aligned_cols=178  Identities=34%  Similarity=0.508  Sum_probs=158.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.++++++++.+.+.|+++++||+||+.++++|++|+..+.+.+.   ...+|.++|+|++|+|+++|+++.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            68999998866699999999999999999999999999999998877654   245678999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+...|+.|..|..|..++|++..+   .|...+|                   +|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence            99999999888999999999999999998876   3433444                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHh-cCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++.+++.+.|||+++.+. ..+.++++|||+|+|++|++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~  182 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHI  182 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHH
Confidence            99999999999999999977665 46889999999999779875

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.96  E-value=2.5e-28  Score=211.59  Aligned_cols=197  Identities=43%  Similarity=0.660  Sum_probs=159.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.+++.++++++++.|+++++||+||++++++|+.|+..+.+.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            68999999877799999999999999999999999999999998887654 35678999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|+..+..+|+.|.+|+++..++|++.-.. -.+...++..++. ..|...+.....|+|++|+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFT-ADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCccccc-ccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            999999899999999999999999865210 0111111100000 00111111122359999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++++++.|||.++++..++.+|++|||+|+|++|++
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a  197 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLN  197 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            9999999999999998888889999999999977888865

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=1.7e-28  Score=208.84  Aligned_cols=176  Identities=28%  Similarity=0.364  Sum_probs=152.4

Q ss_pred             eeeEEeccCC-CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||++++..++ ..+++++.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6888887665 33888888888899999999999999999999887642 222457799999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+...|+.|++|..|+.++|++..+   .+...+|                   +|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~  137 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS  137 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence            999999888999999999999999987653   2322333                   899999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++.+.+++.+||+++. ..++++|++|+|+|+ |++|++
T Consensus       138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~  178 (325)
T cd08264         138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIF  178 (325)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHH
Confidence            9999999989999999764 488999999999998 999975

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=6.3e-28  Score=207.25  Aligned_cols=178  Identities=34%  Similarity=0.500  Sum_probs=158.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.+++.++++++.+.|.+.++||+||+.++++|++|+..+.+.++...+|.++|+|++|+|+++|+++..|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999988877799999999999999999999999999999999888765556688999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCCC
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV  174 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~~  174 (217)
                      +|++.+...|+.|.+|..|..++|++...   .+...+|                   +|++|+.++..  .++++|+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~~~  138 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPDDV  138 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCCCC
Confidence            99987778899999999999999998753   2322234                   99999999974  899999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++.+.+++.|||+++.+..++.++++|||+|+|++|++
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~  180 (345)
T cd08260         139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLS  180 (345)
T ss_pred             CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHH
Confidence            999999998899999998777888999999999998888865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.96  E-value=4e-28  Score=209.07  Aligned_cols=175  Identities=27%  Similarity=0.461  Sum_probs=151.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC---------CCCCeeeeecceEEEEEeCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~---------~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      |||++++++++ +++++++.|++.++||+||++++++|++|+..+.|....         ..+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            68999998887 999999999999999999999999999999988775311         14677899999999999999


Q ss_pred             CCC--CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCC--CCCCCcccccCCCceeeeccccceeeeeEEec
Q 027867           88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM--PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (217)
Q Consensus        88 ~v~--~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~--~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  163 (217)
                      +++  +|++||+|++.+...|+.|..|..+..++|+....   .|.  ..+                   |+|++|+.++
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~-------------------g~~~~~~~~~  137 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVN-------------------GGMAEYMRFP  137 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCC-------------------CcceeeEEcc
Confidence            999  89999999999999999999999999999975432   222  122                   4999999999


Q ss_pred             cc-cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          164 IA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       164 ~~-~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      .+ .++++|+++++++++.+ .++.|+|.++ +..++++|++|||.|+|++|++
T Consensus       138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~  189 (350)
T cd08256         138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLG  189 (350)
T ss_pred             cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            87 57899999999999888 7899999976 7889999999999777999865

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.96  E-value=8e-28  Score=205.78  Aligned_cols=176  Identities=26%  Similarity=0.411  Sum_probs=153.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++...+++.|.|.++++||+||++++++|++|+..+.+.++. ..|.++|||++|+|+++|++++.|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            789999988873348999999999999999999999999999988776543 3467899999999999999999999999


Q ss_pred             EEeeec-ccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        97 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      +|++.+ ..+|+.|..|..+..++|.+...   .|...+|                   +|++|+.++.+.++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~  137 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD  137 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence            998754 56899999999999999987653   3333444                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++.+++.+.|||+++ +.+++++|++|||+|+|++|++
T Consensus       138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~  177 (338)
T PRK09422        138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNL  177 (338)
T ss_pred             HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHH
Confidence            999999999999999976 7788999999999998888865

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.96  E-value=9e-28  Score=206.28  Aligned_cols=178  Identities=28%  Similarity=0.402  Sum_probs=156.4

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++. +++++++.|+| .++||+||++++++|++|+.++.|.++...+|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68999988887 99999999986 79999999999999999999998876554567899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.+...|+.|.+|..+..+.|....+.  .|...+                   |+|++|+.++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp~~  138 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLPEG  138 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECCCC
Confidence            9999998889999999999999999876442  122222                   399999999987  89999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++..+++.+.+.+.|||.++....++.+|++|||+|+|++|.+
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~  181 (345)
T cd08286         139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLA  181 (345)
T ss_pred             CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence            9999999998899999987777888999999999988988865

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.96  E-value=6.9e-28  Score=212.31  Aligned_cols=169  Identities=21%  Similarity=0.262  Sum_probs=135.3

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhh-hcCCCC------CCCCeeeeecceEEEEEeCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP------AVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~-~g~~~~------~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      |+|||++++++++ ++++++|.|+|+++||+|||+++|||++|++.+ .+....      ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            4589999999987 999999999999999999999999999999976 453211      24688999999999999999


Q ss_pred             CCC-CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc-
Q 027867           88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-  165 (217)
Q Consensus        88 ~v~-~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  165 (217)
                      +|+ +|++||+|++.+...|+.|..|. +             .|...+|                   +|+||++++.+ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~-------------~g~~~~G-------------------~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-G-------------YSYTYPG-------------------GLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-C-------------ccccCCC-------------------cceEEEEecHHh
Confidence            998 69999999998888898888772 1             1222334                   99999999987 


Q ss_pred             ---cEEEcCCCCCccccccc-cch-hhhHHHHH--------HHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          166 ---HVVKVDPTVPPNRACLL-SCG-VSTGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       166 ---~~~~~p~~~~~~~aa~l-~~~-~~ta~~a~--------~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                         .++++|+++++++++++ +.+ ..+++.++        .+.+++++|++|+|+|+ |++|+++
T Consensus       127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~a  192 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMA  192 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHH
Confidence               68999999999998865 211 12234332        24578899999999986 9999763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.95  E-value=7.4e-28  Score=207.31  Aligned_cols=178  Identities=29%  Similarity=0.463  Sum_probs=155.1

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC------------CCCCCeeeeecceEEEEE
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES   84 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~------------~~~~p~ilG~e~~G~Vv~   84 (217)
                      |||+++..++.+++++++|.|++.++||+||+.++++|++|++.+.+.++            ...+|.++|||++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            78999988887799999999999999999999999999999998877543            123567899999999999


Q ss_pred             eCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc
Q 027867           85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (217)
Q Consensus        85 vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  164 (217)
                      +|++++++++||+|++.+...|+.|..|.++++++|....+.   |....                   |++++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------g~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GIFQD-------------------GGYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---eeecc-------------------CcceeeEEecH
Confidence            999999999999999999999999999999999999775432   21122                   38999999999


Q ss_pred             ccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       165 ~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +.++++|+++++.+++.+.+.+.|||+++......+++++|||+|+|++|++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~  190 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLM  190 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHH
Confidence            9999999999999999999999999997766666678999999988998875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.95  E-value=1.6e-27  Score=207.48  Aligned_cols=185  Identities=26%  Similarity=0.389  Sum_probs=152.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||++++.+++. ++++++|+|.+ +++||+||++++++|++|++.+.+.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            58899988875 99999999996 799999999999999999999888765 3568999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.+..+|+.|..|..+..++|.+..... .+ ...|...        ..  ...|+|++|++++.+  .++++|++
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~-~~-~~~~~~~--------~~--~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGR-AG-GAYGYVD--------MG--PYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCccc-cc-ccccccc--------cC--CCCCeeeeEEEeecccCcEEECCCC
Confidence            99999999999999999999999998643210 00 0000000        00  001499999999975  89999999


Q ss_pred             CCcc---ccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~---~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++   +++.+..++.|||+++ +.+++.+|++|||.|+|++|++
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~  191 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLM  191 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            9998   5677778899999976 8889999999999988998875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.95  E-value=1.1e-27  Score=209.62  Aligned_cols=182  Identities=18%  Similarity=0.149  Sum_probs=153.6

Q ss_pred             CCceeeeEEecc--CCC---CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC----------CCCCCeeeeec
Q 027867           13 KPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFPRILGHE   77 (217)
Q Consensus        13 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~----------~~~~p~ilG~e   77 (217)
                      +|.+|||+++..  .+.   .+++++++.|.++++||+||+++++||++|++.+.+...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            788899998853  222   278899999999999999999999999999988766411          01123589999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeecccccee
Q 027867           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSF  156 (217)
Q Consensus        78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~  156 (217)
                      ++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|+...+   .|.. .+                   |+|
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~-------------------g~~  146 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNY-------------------GSF  146 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCC-------------------Ccc
Confidence            999999999999999999999999888999999999999999986543   2221 22                   399


Q ss_pred             eeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHh--cCCCCCCEEEEEcC-ChhccC
Q 027867          157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       157 a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~--~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++|++++...++++|+++++++++.+.+++.|||+++...  +++++|++|||+|+ |++|++
T Consensus       147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a  209 (393)
T cd08246         147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSM  209 (393)
T ss_pred             eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHH
Confidence            9999999999999999999999998989999999976554  67899999999998 999975

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.95  E-value=2.9e-28  Score=195.81  Aligned_cols=157  Identities=28%  Similarity=0.309  Sum_probs=143.5

Q ss_pred             CCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      ...|+..|.+++++.|..  +++++.|.|+|.++|++||..|+|+|..|...+.|.+...+.|+++|-|++|+|+++|+.
T Consensus         3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~g   82 (336)
T KOG1197|consen    3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEG   82 (336)
T ss_pred             CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCC
Confidence            356788999999998875  899999999999999999999999999999999999977789999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  168 (217)
                      |+++++||||....                              ..                   |.|+|+..+|...++
T Consensus        83 vtdrkvGDrVayl~------------------------------~~-------------------g~yaee~~vP~~kv~  113 (336)
T KOG1197|consen   83 VTDRKVGDRVAYLN------------------------------PF-------------------GAYAEEVTVPSVKVF  113 (336)
T ss_pred             ccccccccEEEEec------------------------------cc-------------------hhhheeccccceeec
Confidence            99999999997431                              11                   399999999999999


Q ss_pred             EcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       169 ~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++|+.++++.||++.+...|||.-+++..++++|++|||+.| |++|++
T Consensus       114 ~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGll  162 (336)
T KOG1197|consen  114 KVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLL  162 (336)
T ss_pred             cCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHH
Confidence            999999999999988899999998888899999999999977 999975

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.95  E-value=1.1e-27  Score=203.52  Aligned_cols=156  Identities=24%  Similarity=0.368  Sum_probs=126.0

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCC-hhhhhhhhcCCCC---CCCCeeeeecceEEEEEeCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~-~~D~~~~~g~~~~---~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ++||+++.+++. +++++++.|+|+++|||||+++++|| ++|++.+.|.++.   ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            478999998887 99999999999999999999999996 7999988887643   3579999999999999999998 6


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|++.    |..|..|..+                 .+                   |+|+||++++.+.++++|
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~~-----------------~~-------------------G~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVRG-----------------LF-------------------GGASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEe----Cccccccccc-----------------cC-------------------CcccceEEcCHHHceeCC
Confidence            9999999873    2223222110                 12                   399999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++. +++. ...|||+++.+ .. .++++|||+|+|++|+++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~~-~~~~~vlV~G~G~vG~~a  160 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-AE-VKVLPDLIVGHGTLGRLL  160 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-cc-cCCCcEEEECCCHHHHHH
Confidence            9999764 5454 57899996643 33 468999999999999764

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.95  E-value=3.2e-27  Score=201.39  Aligned_cols=177  Identities=30%  Similarity=0.492  Sum_probs=155.9

Q ss_pred             eeeEEeccCCC----CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        17 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      |||+++.+.+.    ++++.+.+.|.+.++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68899988873    48888888888999999999999999999999988876555568899999999999999999999


Q ss_pred             CCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        93 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      ++||+|++.+. ..|+.|..|..+.+++|+...+   .|...+|                   +|++|+.++.+.++++|
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp  138 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP  138 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence            99999987654 6789999999999999988765   3333334                   89999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++.+++.+.+++.|||+++ +.++++++++|||+|+|++|++
T Consensus       139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~  182 (329)
T cd08298         139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHL  182 (329)
T ss_pred             CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHH
Confidence            9999999999999999999976 8899999999999988999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=3.1e-27  Score=200.88  Aligned_cols=178  Identities=25%  Similarity=0.362  Sum_probs=153.6

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++...+.+  +++.+.+.|.+.+++|+||++++++|++|+.++.|..+. ..+|.++|||++|+|+.+|++++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            688988844332  788888888889999999999999999999988876532 35578999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+...|+.|.+|..+.+++|+...+   .|....|                   ++++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence            99999999999999999999999999986432   2332333                   8999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+++++.++|.++.+..++.++++|||+|+ +.+|++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~  182 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSA  182 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHH
Confidence            9999999998899999998778889999999999998 688864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.95  E-value=4.1e-27  Score=206.52  Aligned_cols=184  Identities=22%  Similarity=0.206  Sum_probs=153.3

Q ss_pred             CCCceeeeEEecc--CCCC---eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC----------CCCCC-eeee
Q 027867           12 GKPIQCRAAIATA--PGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILG   75 (217)
Q Consensus        12 ~~~~~~~a~~~~~--~~~~---l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~----------~~~~p-~ilG   75 (217)
                      -+|.+|||+++..  .+++   +++.+++.|.++++||+||++++++|++|.+...+...          ....| .++|
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G   82 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG   82 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence            3677899999954  4543   89999999999999999999999999999876655321          11223 3899


Q ss_pred             ecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccce
Q 027867           76 HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS  155 (217)
Q Consensus        76 ~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~  155 (217)
                      ||++|+|+++|++++.|++||+|++.....|+.|++|+.+...+|+....   .|..                  .+.|+
T Consensus        83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~------------------~~~g~  141 (398)
T TIGR01751        83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYE------------------TNFGS  141 (398)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---cccc------------------CCCcc
Confidence            99999999999999999999999999999999999999999999976542   1111                  01249


Q ss_pred             eeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHH--hcCCCCCCEEEEEcC-ChhccC
Q 027867          156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       156 ~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      |+||++++.+.++++|+++++++++.+.+++.|||.++..  ..++.+|++|||+|+ |++|++
T Consensus       142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~  205 (398)
T TIGR01751       142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSY  205 (398)
T ss_pred             ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHH
Confidence            9999999999999999999999999988999999997654  477899999999998 999975

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.95  E-value=4.7e-27  Score=201.51  Aligned_cols=183  Identities=23%  Similarity=0.347  Sum_probs=153.0

Q ss_pred             eeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCE
Q 027867           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (217)
Q Consensus        18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~   97 (217)
                      |+++.+..+..|++++++.|++.++||+||++++++|++|++.+.+.+....+|.++|||++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            46777777766999999999999999999999999999999998887655567889999999999999999999999999


Q ss_pred             Ee-eecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           98 VI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        98 V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      |+ ......|+.|++|..+..++|+...+.. .|....+              ....|+|+||+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~  145 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS  145 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence            98 4445689999999999999998765421 1110000              111249999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++.+.+.+.|||.++ +...+++|++|+|.|.|++|++
T Consensus       146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~  184 (337)
T cd05283         146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHL  184 (337)
T ss_pred             HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHH
Confidence            99999999999999965 5567899999999888988865

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.95  E-value=4.8e-27  Score=201.42  Aligned_cols=179  Identities=27%  Similarity=0.425  Sum_probs=151.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCC-CCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++. ++++++++|.|. ++||+||+.++++|+.|+....+.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            67999988765 999999999985 99999999999999999988877654 3457899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.+..+|+.|.+|..+..+.|++.......+..                  ...|++++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~~~p~~  140 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP------------------NLDGAQAEYVRVPFADGTLLKLPDG  140 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCccccccccC------------------CCCCceeEEEEcccccCceEECCCC
Confidence            9999988889999999999999999765321000000                  012489999999865  99999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++.+++++.|||+++ ...++.+|++|||+|+|++|++
T Consensus       141 l~~~~a~~l~~~~~ta~~~~-~~~~~~~~~~vlI~g~g~vg~~  182 (344)
T cd08284         141 LSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLC  182 (344)
T ss_pred             CCHHHhhhhcCchHHHHhhh-HhcCCccCCEEEEECCcHHHHH
Confidence            99999999999999999976 4588899999999988998865

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=6.6e-27  Score=202.91  Aligned_cols=198  Identities=31%  Similarity=0.494  Sum_probs=159.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC---CC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~---~~   93 (217)
                      |||+++.+++.++++++++.|.++++||+||+.++++|++|+.++.+.++. .+|.++|||++|+|+++|+++++   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            689999988766899999999999999999999999999999988876654 66789999999999999999988   99


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      +||+|++.+..+|+.|..|..+..++|++..++...+ ....|...+....+.+++- ...|+|++|+.++.+.++++|+
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~  158 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPE  158 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCC
Confidence            9999999888899999999999999999865321111 0011100000000000000 1125999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++++.+++++.|||.++.+...+.++++|||+|+|++|++
T Consensus       159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~  202 (367)
T cd08263         159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSS  202 (367)
T ss_pred             CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHH
Confidence            99999999999999999998877778899999999987988875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.95  E-value=8e-27  Score=202.16  Aligned_cols=179  Identities=30%  Similarity=0.451  Sum_probs=146.9

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      .-.+++++++..++. +++++.+.|.+.++||+||++++++|++|++.+.+...   ...+|.++|||++|+|+++|+++
T Consensus        14 ~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         14 VEEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             cccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            334566666666665 99999999999999999999999999999998876321   12357899999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCceeeeccccceeeeeEEeccccEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  168 (217)
                      ++|++||+|++.+..+|+.|+.|..|..++|++..+   .+. ..+                   |+|++|+.++.+.++
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~-------------------g~~~~y~~v~~~~~~  150 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH-------------------GSLANQVVHPADLCF  150 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC-------------------CcccceEEcchHHeE
Confidence            999999999999999999999999999999986432   111 113                   399999999999999


Q ss_pred             EcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       169 ~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++|++++++++++.. ++.++|.++ +..++.+|++|||+|+|++|++
T Consensus       151 ~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~  196 (364)
T PLN02702        151 KLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLV  196 (364)
T ss_pred             ECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            999999999887532 455577755 7788999999999988988865

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=6.6e-27  Score=198.77  Aligned_cols=169  Identities=24%  Similarity=0.427  Sum_probs=145.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++ +++++++.|+++++||+||++++++|++|+.++.+.++   .|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            68999988765 99999999999999999999999999999998887653   5789999999999999998   67999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      +|...+..+|+.|++|..+.++.|.....   .+. ..+|                   +|++|++++.+.++++|++++
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~  131 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDLVP  131 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCCCC
Confidence            99999999999999999999998877653   222 1233                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      .++++.+ ....++|. +.+..++++|++|||+|+|.+|++
T Consensus       132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~  170 (319)
T cd08242         132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLL  170 (319)
T ss_pred             HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHH
Confidence            9888764 35556666 568889999999999988999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.95  E-value=9.1e-27  Score=198.66  Aligned_cols=178  Identities=33%  Similarity=0.482  Sum_probs=157.2

Q ss_pred             eeeEEeccCCCC-eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      ||++++..++++ +.+.+.+.|.+.++||+||+.++++|+.|...+.+.+. ...+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            689999999887 67788889999999999999999999999999888764 3456789999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|+..+..+|+.|++|..++.++|.....   .|...+|                   +|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~  138 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV  138 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence            9999999999999999999999999966543   2333334                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++.+..++.|||.++.+..+++++++|||.|+|.+|++
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~  180 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLN  180 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHH
Confidence            999999998999999998877788999999999887888865

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.95  E-value=8.7e-27  Score=198.77  Aligned_cols=176  Identities=31%  Similarity=0.455  Sum_probs=153.3

Q ss_pred             eeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCE
Q 027867           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (217)
Q Consensus        18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~   97 (217)
                      ||+++.+.+..+++++.+.|.+.++||+||+.++++|++|+..+.+.+....+|.++|||++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            68888888555999999999999999999999999999999998877644456789999999999999999999999999


Q ss_pred             Eeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        98 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      |++.+. .+|+.|++|.++..++|++..+   .+....|                   +|++|+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~  138 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL  138 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence            987654 5799999999999999998654   2222233                   8999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++.+.+.+.|||.++. ..+++++++|||+|+|++|++
T Consensus       139 ~~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~  177 (330)
T cd08245         139 AQAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHL  177 (330)
T ss_pred             HHhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHH
Confidence            999988889999999764 478999999999988888865

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.94  E-value=2e-26  Score=197.32  Aligned_cols=174  Identities=34%  Similarity=0.574  Sum_probs=150.1

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++..++. +++.+++.|.++++||+|||.++++|+.|+.+..+.++...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            68999988876 99999999999999999999999999999998887765545678999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|+..+..+|+.|..|+.+..+.|...+.   .+....                   |+|++|+.++++ ++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~-~~~~p~~~~~  136 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRD-------------------GGFAEYIVVPAD-ALLVPEGLSL  136 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCC-------------------CcceeEEEechh-eEECCCCCCH
Confidence            99998888999999999999999954322   111112                   389999999999 9999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++ ..+.+++.++ +..++.+|++|||+|+|.+|.+
T Consensus       137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~  174 (337)
T cd08261         137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLG  174 (337)
T ss_pred             HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            998877 4778888865 7789999999999987888865

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.94  E-value=2e-26  Score=197.55  Aligned_cols=175  Identities=31%  Similarity=0.473  Sum_probs=152.0

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.+++. +.+++.+.|++.+++|+||++++++|+.|+.++.+.+.....|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            58999988876 99999999999999999999999999999998887654334577999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc-----EEEcC
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD  171 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~~p  171 (217)
                      +|++.+...|+.|+.|..+..++|+...+   .|...+|                   +|++|++++.+.     ++++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~lP  137 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLKLP  137 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEECC
Confidence            99999888999999999999999987653   2222333                   999999999988     99999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++.+++.+ .++.+||+++ +..++++|++|||+|+|.+|++
T Consensus       138 ~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VlV~g~g~vg~~  180 (343)
T cd08235         138 DNVSFEEAALV-EPLACCINAQ-RKAGIKPGDTVLVIGAGPIGLL  180 (343)
T ss_pred             CCCCHHHHHhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            99999998876 6889999976 4558999999999987888865

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.94  E-value=1.5e-26  Score=198.48  Aligned_cols=175  Identities=27%  Similarity=0.445  Sum_probs=146.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC---CCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      ||++++..+++.+++.++|.|.|+++||+||++++++|++|+.++.+..   ....+|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            5899998888779999999999999999999999999999998766532   1234678999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+..+..+|..|+.|..+.+++|+..++   .+...+|                   +|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence            99999999888999999999999999987543   2322334                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++.+ ..+.+++.+++.  ...+|++|||.|+|++|++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~  178 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIM  178 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHH
Confidence            999888755 466666664543  3468999999988988865

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.94  E-value=1.7e-26  Score=201.74  Aligned_cols=178  Identities=27%  Similarity=0.443  Sum_probs=146.5

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC------C-CCCCCeeeeecceEEEEEeCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~------~-~~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      ..+.+.++... + +++++++.|+++++||+||++++++|++|++.+.+..      + ...+|.++|||++|+|+++|+
T Consensus        27 ~~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~  104 (384)
T cd08265          27 TNLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK  104 (384)
T ss_pred             ccceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence            34555565543 4 9999999999999999999999999999998876321      1 134678999999999999999


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      ++++|++||+|++.+..+|+.|+.|..+..++|..+..   .|...+|                   +|++|+.++.+.+
T Consensus       105 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~  162 (384)
T cd08265         105 NVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYA  162 (384)
T ss_pred             CCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHe
Confidence            99999999999999999999999999999999987653   3332334                   9999999999999


Q ss_pred             EEcCCCC-------CccccccccchhhhHHHHHHHh-cCCCCCCEEEEEcCChhccCC
Q 027867          168 VKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       168 ~~~p~~~-------~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++|+.+       +.+ ++.+..++++||+++... .++++|++|||+|+|++|+++
T Consensus       163 ~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~a  219 (384)
T cd08265         163 WEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAA  219 (384)
T ss_pred             EECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHH
Confidence            9999863       444 455556889999987665 689999999999889998753

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.94  E-value=3.3e-26  Score=196.45  Aligned_cols=175  Identities=33%  Similarity=0.438  Sum_probs=147.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||+++++++++ +++++.|.|+| +++||+||+.++++|++|+..+.+.++. ..|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            68999998887 99999999996 8999999999999999999988876543 457899999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.....|+.|..|..++.++|.+..+   .+...+|                   +|++|++++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~  136 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS  136 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence            999986677899999999999999987653   3333444                   99999999874  99999999


Q ss_pred             CCccccc-----cccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa-----~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++.+.     .+...+.+||+++ +.+++++|++|||.|+|++|++
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~  183 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLC  183 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            9873222     2235788899865 5788999999999888999875

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.94  E-value=4.7e-26  Score=195.22  Aligned_cols=164  Identities=26%  Similarity=0.368  Sum_probs=139.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-----------CCCCCeeeeecceEEEEEe
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV   85 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-----------~~~~p~ilG~e~~G~Vv~v   85 (217)
                      |||+++.++ . +++++++.|+++++||+||+.++++|+.|++.+.+...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~-~-~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG-P-LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC-c-eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            689998776 4 99999999999999999999999999999998877321           2235789999999999999


Q ss_pred             CCCCCC-CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc
Q 027867           86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (217)
Q Consensus        86 G~~v~~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  164 (217)
                      |+++++ |++||+|+..+...|+.|+.|..|...             ..+                   |+|++|+.++.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~~~-------------------g~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------EAP-------------------GGYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------CCC-------------------CceeeeEEech
Confidence            999987 999999999999999999999433110             112                   38999999999


Q ss_pred             ccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       165 ~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +.++++|+++++++++ +..++++||++ ...+++++|++|||+|+|++|.+
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~  176 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLA  176 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHH
Confidence            9999999999998877 55688899996 57889999999999988988865

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.94  E-value=7.2e-26  Score=193.25  Aligned_cols=174  Identities=31%  Similarity=0.511  Sum_probs=152.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++ +++.+++.|+++++||+||++++++|+.|+....+.++. .+|.++|+|++|+|+++|+++++|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            68999988886 999999999999999999999999999999988887653 4778999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|++.+...|+.|.+|..+..++|.....   .|...+|                   +|++|++++.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~  136 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF  136 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence            99998888899999999999998877642   3222334                   9999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      .+++.+ ..+.+++.++ +.+++++|++|||+|+|.+|.+
T Consensus       137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~  174 (334)
T cd08234         137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLL  174 (334)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            998776 6788888876 7889999999999988888865

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.94  E-value=1e-25  Score=191.09  Aligned_cols=177  Identities=29%  Similarity=0.478  Sum_probs=151.0

Q ss_pred             eeeEEeccCCC-CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||++++.+.+. .+++++++.|.+.++||+||+.++++|++|++...+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            57888876552 39999999999999999999999999999998888776444567899999999999999999999999


Q ss_pred             CEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+. ..|+.|++|..+....|+..+.   .|...+|                   +|++|++++.+.++++|+++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lp~~~  138 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG-------------------GFAEYVLVPEESLHELPENL  138 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC-------------------ceEEEEEcchHHeEECcCCC
Confidence            99998774 6799999999999999976432   2222233                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++ +...+.++|+++....+++++++|||.|+|.+|.+
T Consensus       139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~  179 (306)
T cd08258         139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLL  179 (306)
T ss_pred             CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHH
Confidence            999887 56688899998888889999999999877888865

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.94  E-value=8.1e-26  Score=194.21  Aligned_cols=175  Identities=34%  Similarity=0.511  Sum_probs=146.9

Q ss_pred             eEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcC-CC--CCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DF--PAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        19 a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~-~~--~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |+++.+++. +++++.+.|.+.++||+||+.++++|+.|++.+.+. ..  ...+|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            456777765 999999999999999999999999999998876422 11  12457789999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+..+|+.|+.|+.|.+++|++..+..  ....+|                   +|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAA--TPPVDG-------------------TLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCccccc--cccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence            99999988999999999999999998754311  111223                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++.+ .++.+|++++ +.+++++|++|||+|+|++|+++
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a  178 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLT  178 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            9998877 4788899864 88999999999999888888753

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.94  E-value=1.1e-25  Score=192.99  Aligned_cols=174  Identities=31%  Similarity=0.530  Sum_probs=150.7

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++++.+. +.+++.+.|++.++||+||+.++++|+.|+..+.+.+. ...|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            68999998876 99999999999999999999999999999988877652 24578999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      +|+..+...|..|++|..+....|.....   .|...+|                   +|++|+.++.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~~~  136 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHVDY  136 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCCCH
Confidence            99998888899999999999988877532   2222333                   9999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++ ..+.|||.++ ...+++++++|||+|+|.+|.+
T Consensus       137 ~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~g~g~~g~~  174 (343)
T cd08236         137 EEAAMI-EPAAVALHAV-RLAGITLGDTVVVIGAGTIGLL  174 (343)
T ss_pred             HHHHhc-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            998887 5788999976 4778999999999987888765

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.93  E-value=2.1e-25  Score=191.03  Aligned_cols=175  Identities=31%  Similarity=0.481  Sum_probs=143.0

Q ss_pred             EeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhh-cCCC--CCCCCeeeeecceEEEEEeCCCCCCCCCCCE
Q 027867           21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (217)
Q Consensus        21 ~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~-g~~~--~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~   97 (217)
                      ++++.++ +++++.+.|.++++||+||+.++++|++|+..+. +.+.  ...+|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            4566766 9999999999999999999999999999988763 3221  1245789999999999999999999999999


Q ss_pred             EeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCc
Q 027867           98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (217)
Q Consensus        98 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~  176 (217)
                      |++.+...|++|.+|..|+.+.|+...+.   +.. .+               ....|+|++|++++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~  142 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSL  142 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccce---eecccc---------------CCCCCceeeEEEechHHeEECcCCCCH
Confidence            99998889999999999999999876431   100 00               001249999999999999999999999


Q ss_pred             cccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       177 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++|+. ..+++++|.++.+...+ ++++|||.|+|.+|++
T Consensus       143 ~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~  180 (339)
T cd08232         143 RRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGAL  180 (339)
T ss_pred             HHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHH
Confidence            98876 46888999876555555 8999999888888865

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.93  E-value=5.1e-25  Score=188.81  Aligned_cols=177  Identities=30%  Similarity=0.432  Sum_probs=152.4

Q ss_pred             eeeEEeccCC-CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |||+++.+++ ..+++.+++.|.+.++||+||+.++++|++|...+.+.++. ...+.++|||++|+|+++|++++.|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            6899998876 23999999999999999999999999999999888776532 345678999999999999999999999


Q ss_pred             CCEEeeec-ccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        95 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      ||+|+..+ ...|+.|.+|..++.++|++..+   .|....|                   ++++|+.++.+.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~  138 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG  138 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence            99999776 46799999999999999988754   3333334                   8999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.++..+.|||.++.. .+++++++|||+|+ +.+|++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~  181 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHL  181 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHH
Confidence            9999999888899999996544 58999999999998 568865

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=99.93  E-value=1.8e-25  Score=182.54  Aligned_cols=157  Identities=24%  Similarity=0.371  Sum_probs=143.5

Q ss_pred             CCCceeeeEEeccCCCC---eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCC
Q 027867           12 GKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      .++...|++++.+.++|   ++++++++|....++|+||.+|+.|||+|+..+.|.|+. +.+|.+-|+|++|+|+++|+
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs   94 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS   94 (354)
T ss_pred             ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence            46777899999999988   888999999988888999999999999999999999976 57899999999999999999


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      ++++|++||+|+....                                                +.|+|++|.+.+++.+
T Consensus        95 ~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~L  126 (354)
T KOG0025|consen   95 NVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDL  126 (354)
T ss_pred             CcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccce
Confidence            9999999999986532                                                1249999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++.++++.||.+.....|||+.+.+..++.+||+|+-.|| ++||++
T Consensus       127 i~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~  176 (354)
T KOG0025|consen  127 IKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQA  176 (354)
T ss_pred             EEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHH
Confidence            9999999999999999999999998888899999999999999 899864

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=3.8e-25  Score=189.98  Aligned_cols=170  Identities=28%  Similarity=0.358  Sum_probs=138.9

Q ss_pred             eeeEEeccCCCC--eEEEE-eecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC--------------------CCCCCee
Q 027867           17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI   73 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~--------------------~~~~p~i   73 (217)
                      |||+++..++.+  +.+.+ .+.|.+.+++|+||+.++++|++|++++.|.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888776643  55544 577788999999999999999999998876542                    2346789


Q ss_pred             eeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeecccc
Q 027867           74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV  153 (217)
Q Consensus        74 lG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~  153 (217)
                      +|||++|+|+++|+++++|++||+|++.+...|+.|+.|..     |.   .   .|...+                   
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~~~-------------------  130 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSERD-------------------  130 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCCCC-------------------
Confidence            99999999999999999999999999988888887766432     11   0   111122                   


Q ss_pred             ceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       154 g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      |++++|+.++.+.++++|+++++++++.+.+++.|||.++ +..++++|++|||+|+ |++|+++
T Consensus       131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~  194 (350)
T cd08274         131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSAL  194 (350)
T ss_pred             ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHH
Confidence            3899999999999999999999999999999999999965 7788999999999998 9998753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.93  E-value=5.9e-26  Score=164.80  Aligned_cols=108  Identities=35%  Similarity=0.541  Sum_probs=94.9

Q ss_pred             CCeEEEEEeEeeCChhhhhhhhcC-CCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCC
Q 027867           41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL  119 (217)
Q Consensus        41 ~~eVlV~v~a~~i~~~D~~~~~g~-~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~  119 (217)
                      |+|||||+++++||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|..|..+..++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            689999999999999999999983 4556899999999999999999999999999999999988899999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867          120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus       120 c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      |++...   .|...+|                   +||||+++++++++++
T Consensus        81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred             CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence            977665   5555666                   9999999999999885

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd05281 TDH Threonine dehydrogenase

Probab=99.92  E-value=1.1e-24  Score=187.10  Aligned_cols=175  Identities=30%  Similarity=0.473  Sum_probs=144.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC---CCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++...+..+++.+.+.|.|.++|++||++++++|+.|+.++.+..   .....|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6889998877669999999999999999999999999999988754421   1224567899999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+..+..+|+.|..|..+..++|+....   .|....                   |+|++|++++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTD-------------------GCFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCC-------------------CcceEEEEechHHcEECcCC
Confidence            99999998888999999999999999976432   222223                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++.+.+ .+...+.+++.++.  ...++|++|||+|+|.+|++
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~  178 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLM  178 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHH
Confidence            998555 44457788887654  45578999999988888865

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.92  E-value=9.7e-25  Score=185.28  Aligned_cols=151  Identities=28%  Similarity=0.327  Sum_probs=131.9

Q ss_pred             eeeEEeccCCCC---eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        17 ~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      |||+++.+++++   +++++++.|.+.++||+||++++++|++|+..+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689999887653   78899999999999999999999999999999888764 23568899999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|++...                              .                   |+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~ip~  111 (324)
T cd08292          81 QVGQRVAVAPV------------------------------H-------------------GTWAEYFVAPADGLVPLPD  111 (324)
T ss_pred             CCCCEEEeccC------------------------------C-------------------CcceeEEEEchHHeEECCC
Confidence            99999976421                              1                   3899999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ++++++++.+++...|+|.++ +..++++|++|||+|+ |.+|+++
T Consensus       112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~  156 (324)
T cd08292         112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLV  156 (324)
T ss_pred             CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHH
Confidence            999999999888889999865 6688999999999988 8898753

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.92  E-value=8.2e-25  Score=186.89  Aligned_cols=153  Identities=24%  Similarity=0.244  Sum_probs=131.3

Q ss_pred             eeEEeccC---CCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        18 ~a~~~~~~---~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      ||+++.++   +++  ++++++|.|+|+++||+||++++++|+.|+..+.+..+...+|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57788775   433  7888999999999999999999999999998887765544568899999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|+....                           ...+                   |+|++|++++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip~  114 (336)
T TIGR02817        81 KPGDEVWYAGD---------------------------IDRP-------------------GSNAEFHLVDERIVGHKPK  114 (336)
T ss_pred             CCCCEEEEcCC---------------------------CCCC-------------------CcccceEEEcHHHcccCCC
Confidence            99999975310                           0112                   3899999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCC-----CCEEEEEcC-ChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~Ga-G~vG~~  216 (217)
                      ++++++++.++++..|||.++.+..++.+     |++|||+|+ |++|++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~  164 (336)
T TIGR02817       115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSI  164 (336)
T ss_pred             CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHH
Confidence            99999999999999999998878888877     999999997 899875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.91  E-value=4e-24  Score=182.39  Aligned_cols=151  Identities=21%  Similarity=0.244  Sum_probs=125.5

Q ss_pred             eeeEEeccCCC-----CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCC
Q 027867           17 CRAAIATAPGE-----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        17 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      |||+++.+++.     .+++.++|.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            68999988874     3788899999999999999999999999999998887643 35688999999999999999998


Q ss_pred             C-CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      + |++||+|++...                             .+                   |+|+||++++.+.+++
T Consensus        81 ~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~~  112 (324)
T cd08291          81 AQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCLP  112 (324)
T ss_pred             ccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeEE
Confidence            6 999999975321                             01                   3899999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE-cC-ChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GL-GSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~-Ga-G~vG~~a  217 (217)
                      +|+++++++++.+.+...|||. +.+..+. ++++++|+ |+ |++|+++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a  160 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRML  160 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHH
Confidence            9999999999988788899986 5555665 56666665 55 9999753

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.91  E-value=2e-24  Score=181.15  Aligned_cols=128  Identities=23%  Similarity=0.352  Sum_probs=106.5

Q ss_pred             eeeecceEEEEEeCCCCC------CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCce
Q 027867           73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET  146 (217)
Q Consensus        73 ilG~e~~G~Vv~vG~~v~------~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~  146 (217)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|+.|++|+.|++++|++....   |....+           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~-----------   66 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALD-----------   66 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---Cccccc-----------
Confidence            589999999999999999      899999999999999999999999999999886542   211100           


Q ss_pred             eeeccccceeeeeEEeccc-cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       147 ~~~~~~~g~~a~~~~v~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                       ..+...|+|+||++++++ .++++|+++++++++.+.+++.|+|+++ +.....+|++|||+|+|++|++
T Consensus        67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~  135 (280)
T TIGR03366        67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLT  135 (280)
T ss_pred             -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHH
Confidence             000012499999999987 7999999999999999988999999965 5566679999999999999975

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.91  E-value=5.6e-24  Score=182.21  Aligned_cols=152  Identities=26%  Similarity=0.349  Sum_probs=133.2

Q ss_pred             eeeEEeccCCCC---eEEEEeecCCCCC-CeEEEEEeEeeCChhhhhhhhcCCCCC-C----CCeeeeecceEEEEEeCC
Q 027867           17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE   87 (217)
Q Consensus        17 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~eVlV~v~a~~i~~~D~~~~~g~~~~~-~----~p~ilG~e~~G~Vv~vG~   87 (217)
                      |||+++.+++.+   +++++.|.|.|.+ +||+||+.++++|++|+..+.+..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            789999988875   8999999999887 999999999999999999888765421 2    567999999999999999


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      ++..|++||+|++...                             ..                   |+|++|+.++.+.+
T Consensus        81 ~v~~~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP-----------------------------GL-------------------GTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC-----------------------------CC-------------------ccchheEeccHHHe
Confidence            9999999999985421                             01                   38999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++|+++++++++.+++.+.|||+++.+..++++|++|||+|+ |++|++
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~  162 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQA  162 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHH
Confidence            9999999999999999999999998777788999999999998 899875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.91  E-value=1.8e-23  Score=179.47  Aligned_cols=138  Identities=20%  Similarity=0.172  Sum_probs=113.0

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeEeeCChhhhhhhh---cCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeeccc
Q 027867           29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA  104 (217)
Q Consensus        29 l~~~~~~~p~~~-~~eVlV~v~a~~i~~~D~~~~~---g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~  104 (217)
                      +++++++.|+|. ++||||||+|+|||+.|+....   +......+|.++|||++|+|+++|+++++|++||+|+...  
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence            888999999874 9999999999999999964332   1111135678999999999999999999999999997420  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccc----cc
Q 027867          105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC  180 (217)
Q Consensus       105 ~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~----aa  180 (217)
                                                                       ++|+||++++.+.++++|+++++.+    ++
T Consensus       101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a  131 (345)
T cd08293         101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG  131 (345)
T ss_pred             -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence                                                             1799999999999999999865433    44


Q ss_pred             cccchhhhHHHHHHHhcCCCCC--CEEEEEcC-ChhccCC
Q 027867          181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAV  217 (217)
Q Consensus       181 ~l~~~~~ta~~a~~~~~~~~~g--~~VlI~Ga-G~vG~~a  217 (217)
                      .+..++.|||+++.+..++++|  ++|||+|+ |++|+++
T Consensus       132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~a  171 (345)
T cd08293         132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLA  171 (345)
T ss_pred             hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHH
Confidence            5667899999987778888877  99999998 9999763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.91  E-value=1.9e-23  Score=179.25  Aligned_cols=169  Identities=29%  Similarity=0.514  Sum_probs=140.6

Q ss_pred             ccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC---CCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEe
Q 027867           23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI   99 (217)
Q Consensus        23 ~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~   99 (217)
                      ..++.+++++++|.|.|+++||+||+.++++|+.|+.++.+..   ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            4566669999999999999999999999999999998765532   1224567899999999999999999999999999


Q ss_pred             eecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCcccc
Q 027867          100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA  179 (217)
Q Consensus       100 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~a  179 (217)
                      ..+...|+.|..|..+..++|...++   .+....                   |+|++|++++.+.++++|++++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a  142 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEYA  142 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence            99888999999999999999988754   222223                   38999999999999999999998655


Q ss_pred             ccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       180 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      + +..++.++++++  ...+++|++|||.|+|++|.+
T Consensus       143 ~-~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~  176 (340)
T TIGR00692       143 T-IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLM  176 (340)
T ss_pred             h-hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHH
Confidence            4 556888888865  345678999999887888865

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.90  E-value=2.9e-23  Score=176.81  Aligned_cols=153  Identities=20%  Similarity=0.191  Sum_probs=133.5

Q ss_pred             eeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        16 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      +||++++.+++.+  +++++++.|.++++||+||+.++++|++|+....+.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            4899999887764  88899999999999999999999999999998888765445678999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+....                             .                   .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~-----------------------------~-------------------~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         81 VGDRVVYAQS-----------------------------A-------------------LGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             CCCEEEECCC-----------------------------C-------------------CcceeeEEEcCHHHceeCCCC
Confidence            9999974210                             0                   138999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+.+...++|.++.+..++.+|++|+|+|+ |.+|++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~  156 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLI  156 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHH
Confidence            9999999888899999997777788999999999986 898865

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.90  E-value=3.1e-23  Score=178.10  Aligned_cols=154  Identities=22%  Similarity=0.260  Sum_probs=131.0

Q ss_pred             eeeEEeccCCCC---eEEEEeecCCCC-CCeEEEEEeEeeCChhhhhhhhcCCC---------------CCCCCeeeeec
Q 027867           17 CRAAIATAPGEP---LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE   77 (217)
Q Consensus        17 ~~a~~~~~~~~~---l~~~~~~~p~~~-~~eVlV~v~a~~i~~~D~~~~~g~~~---------------~~~~p~ilG~e   77 (217)
                      |||+++++++++   +++++++.|.|. ++||+||++++++|++|+.++.+...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            688998888775   888999999994 99999999999999999998876421               23568899999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceee
Q 027867           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (217)
Q Consensus        78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  157 (217)
                      ++|+|+++|+++++|++||+|++....                           ..+                   |+|+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~---------------------------~~~-------------------g~~~  114 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP---------------------------WSQ-------------------GTHA  114 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC---------------------------CCC-------------------ccce
Confidence            999999999999999999999864310                           012                   3899


Q ss_pred             eeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCC----CCCEEEEEcC-ChhccC
Q 027867          158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE----VGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       158 ~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~----~g~~VlI~Ga-G~vG~~  216 (217)
                      +|+.++.+.++++|+++++++++.+++.+.|+|.++.+...+.    +|++|+|+|+ |++|++
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~  178 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTF  178 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHH
Confidence            9999999999999999999999999999999999776666665    4999999997 999875

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.90  E-value=3.1e-23  Score=177.92  Aligned_cols=151  Identities=23%  Similarity=0.239  Sum_probs=123.4

Q ss_pred             ceeeeEEeccCCC-CeEEEEeec----CCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecc--eEEEEEeC
Q 027867           15 IQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESVG   86 (217)
Q Consensus        15 ~~~~a~~~~~~~~-~l~~~~~~~----p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~--~G~Vv~vG   86 (217)
                      -.+|+++...+.. .|++++.++    |+|+++||||||+|++||+.|++.+.|.... ...|.++|+++  .|.+..+|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~   85 (338)
T cd08295           6 VILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD   85 (338)
T ss_pred             EEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence            3467777544443 299999887    8899999999999999999999988885432 35678889754  45666678


Q ss_pred             CCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc-c
Q 027867           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-A  165 (217)
Q Consensus        87 ~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~  165 (217)
                      +.+++|++||+|+..                                                    |+|+||++++. .
T Consensus        86 ~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~  113 (338)
T cd08295          86 SGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQ  113 (338)
T ss_pred             cCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchh
Confidence            888899999999632                                                    27999999999 7


Q ss_pred             cEEEcC-CCCCcc-ccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          166 HVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       166 ~~~~~p-~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      .++++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|+++
T Consensus       114 ~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~a  168 (338)
T cd08295         114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLV  168 (338)
T ss_pred             ceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHH
Confidence            999995 678876 788888999999998878889999999999998 9999753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=3.2e-23  Score=170.74  Aligned_cols=148  Identities=34%  Similarity=0.508  Sum_probs=127.9

Q ss_pred             eEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCC
Q 027867           43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS  121 (217)
Q Consensus        43 eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~  121 (217)
                      ||+||++++++|+.|+..+.+... ...+|.++|||++|+|+++|++++.|++||+|+..+...|+.|+.|+.    .|.
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999999888764 345678999999999999999999999999999999999999999997    676


Q ss_pred             CCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCC
Q 027867          122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV  201 (217)
Q Consensus       122 ~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~  201 (217)
                      ....   .+....                   |++++|+.++.+.++++|+++++++++.+++++.|||.++.+...+++
T Consensus        77 ~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  134 (271)
T cd05188          77 GGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP  134 (271)
T ss_pred             CCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence            5543   222223                   399999999999999999999999999998899999997766666799


Q ss_pred             CCEEEEEcCChhccC
Q 027867          202 GSTVVIFGLGSIGLA  216 (217)
Q Consensus       202 g~~VlI~GaG~vG~~  216 (217)
                      +++|||+|+|++|++
T Consensus       135 ~~~vli~g~~~~G~~  149 (271)
T cd05188         135 GDTVLVLGAGGVGLL  149 (271)
T ss_pred             CCEEEEECCCHHHHH
Confidence            999999999658764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.90  E-value=1.3e-22  Score=172.50  Aligned_cols=172  Identities=26%  Similarity=0.303  Sum_probs=139.6

Q ss_pred             eeeEEeccCC--CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++...+  +.+++++.+.|.++++|++||+.++++|++|+....+.++. ...|.++|||++|+|+++|+.+.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899998664  23888888888899999999999999999999988776543 34678999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.....|..+.      ...|....   ..|...+                   |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~------~~~~~~~~---~~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          81 VGDRVVPTFFPNWLDGP------PTAEDEAS---ALGGPID-------------------GVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             CCCEEEEeccccccccc------cccccccc---ccccccC-------------------ceeeeEEEecHHHeEECCCC
Confidence            99999987655554333      23342211   1222223                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++.+++.+.+++.+||.++.+..++++|++|+|+|+|++|++
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~  175 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLF  175 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHH
Confidence            9999999999999999998777788999999999987888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.90  E-value=5.7e-23  Score=176.46  Aligned_cols=158  Identities=29%  Similarity=0.393  Sum_probs=131.1

Q ss_pred             eeeEEeccCC-CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||++++.++ ..+++++++.|+|+++||+||++++++|++|+..+.+.+ ....|.++|||++|+|+.+|++++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            6899999884 228899999999999999999999999999998775554 12356799999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|+......|+                      +...+                   |+|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~----------------------~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~  118 (339)
T cd08249          80 DRVAGFVHGGNP----------------------NDPRN-------------------GAFQEYVVADADLTAKIPDNIS  118 (339)
T ss_pred             CEEEEEeccccC----------------------CCCCC-------------------CcccceEEechhheEECCCCCC
Confidence            999875432111                      01112                   3899999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCC----------CCCCEEEEEcC-ChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~----------~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++.+++.+.|||.++.+..++          +++++|||+|+ |++|++
T Consensus       119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~  170 (339)
T cd08249         119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTL  170 (339)
T ss_pred             HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHH
Confidence            999999999999999977665544          78999999998 888875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-22  Score=174.83  Aligned_cols=156  Identities=16%  Similarity=0.184  Sum_probs=122.8

Q ss_pred             CCCCCceeeeEEeccCC--C----CeEEEEe---ecCC-CCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeee--c
Q 027867           10 TAGKPIQCRAAIATAPG--E----PLVIDEV---IVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--E   77 (217)
Q Consensus        10 ~~~~~~~~~a~~~~~~~--~----~l~~~~~---~~p~-~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~--e   77 (217)
                      +...+.++|.+++...-  .    .|++++.   +.|. ++++|||||+.|++||+.|+..+.+.......|.++|+  |
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~   81 (348)
T PLN03154          2 MEGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIE   81 (348)
T ss_pred             CCCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeE
Confidence            44566667888884432  1    1888774   5553 47999999999999999998754432222245789998  8


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceee
Q 027867           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (217)
Q Consensus        78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  157 (217)
                      ++|+|..+|+++++|++||+|+..                                                    |+|+
T Consensus        82 ~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~a  109 (348)
T PLN03154         82 GFGVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWE  109 (348)
T ss_pred             eeEEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcE
Confidence            899999999999999999999632                                                    2799


Q ss_pred             eeEEecccc--EEE--cCCCCCcc-ccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          158 EYTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       158 ~~~~v~~~~--~~~--~p~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ||.+++.+.  +++  +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|+++
T Consensus       110 ey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~a  175 (348)
T PLN03154        110 EYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLV  175 (348)
T ss_pred             EEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHH
Confidence            999998753  544  48999986 677888999999998878889999999999998 9999753

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.89  E-value=1.7e-22  Score=171.43  Aligned_cols=155  Identities=21%  Similarity=0.225  Sum_probs=128.0

Q ss_pred             eeeEEeccCCC--CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.++++  +++++++|.|.++++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            68999998885  5999999999999999999999999999999988886532 345789999999999999  456899


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++...                        ..|...+                   |+|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~------------------------~~g~~~~-------------------g~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          79 EGDEVLVTGY------------------------DLGMNTD-------------------GGFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             CCCEEEEccc------------------------ccCCCCC-------------------ceeEEEEEEchhhEEECCCC
Confidence            9999986421                        0122223                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhc--CCC-CCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~--~~~-~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+.+.+.|+|.++....  ++. .+++|||+|+ |++|++
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~  162 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSI  162 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHH
Confidence            999999999999999998765433  335 3579999998 999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.89  E-value=1.6e-22  Score=172.34  Aligned_cols=148  Identities=26%  Similarity=0.256  Sum_probs=129.1

Q ss_pred             eeeEEeccCCC----CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        17 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |||+++.+++.    ++++++++.|.+.++||+||+.++++|+.|+....+.+.. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            89999988765    3899999999999999999999999999999988776542 457889999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      +++||+|++..                               .                   |+|++|+.++.+.++++|
T Consensus        82 ~~~Gd~V~~~~-------------------------------~-------------------g~~~s~~~v~~~~~~~ip  111 (329)
T cd08250          82 FKVGDAVATMS-------------------------------F-------------------GAFAEYQVVPARHAVPVP  111 (329)
T ss_pred             CCCCCEEEEec-------------------------------C-------------------cceeEEEEechHHeEECC
Confidence            99999998531                               1                   389999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +.  +.+++.+.+++.|||+++.+..++++|++|||+|+ |.+|++
T Consensus       112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~  155 (329)
T cd08250         112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQF  155 (329)
T ss_pred             CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHH
Confidence            87  34667788899999998877788999999999997 899865

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-22  Score=172.64  Aligned_cols=152  Identities=25%  Similarity=0.318  Sum_probs=131.6

Q ss_pred             eeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCC
Q 027867           16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        16 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      +|||+++.+++..  +++++.+.|.+.++||+||+.++++|+.|+....+.++. ...|.++|||++|+|+++|++++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            5899999988753  677788888889999999999999999999888775532 3456789999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|+....                              +                   |+|++|++++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~------------------------------~-------------------g~~~~~~~v~~~~~~~ip~  111 (334)
T PTZ00354         81 KEGDRVMALLP------------------------------G-------------------GGYAEYAVAHKGHVMHIPQ  111 (334)
T ss_pred             CCCCEEEEecC------------------------------C-------------------CceeeEEEecHHHcEeCCC
Confidence            99999975310                              1                   3899999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++++++.+.+++.|||.++.+..++++|++|||+|+ |.+|++
T Consensus       112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~  156 (334)
T PTZ00354        112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTA  156 (334)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Confidence            99999999998899999998777788999999999997 899875

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.89  E-value=2.9e-22  Score=169.91  Aligned_cols=152  Identities=24%  Similarity=0.305  Sum_probs=128.9

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC---CCCCeeeeecceEEEEEeCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~---~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |||+++++++.+  +++.+.+.|.+.++||+||+.++++|++|+..+.+..+.   ...|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689998876643  677777777789999999999999999999988775432   345688999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      +++||+|++...                            ..+                   |+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence            999999986421                            012                   389999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++++.+.+.+.|||. +.+..+++++++|||+|+ |++|++
T Consensus       114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~  158 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSL  158 (324)
T ss_pred             CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHH
Confidence            99999999988889999965 778889999999999997 999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.89  E-value=3.5e-22  Score=172.12  Aligned_cols=155  Identities=20%  Similarity=0.264  Sum_probs=128.1

Q ss_pred             eeEEeccCCCCeEEEEeecCCC---CCCeEEEEEeEeeCChhhhhhhhcCCCCCC-CCeeeeecceEEEEEeCCCCC-CC
Q 027867           18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGHEAIGVVESVGENVD-GV   92 (217)
Q Consensus        18 ~a~~~~~~~~~l~~~~~~~p~~---~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~-~p~ilG~e~~G~Vv~vG~~v~-~~   92 (217)
                      |++++.+++.++++++++.|.|   +++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6889999888888887777766   899999999999999999887754322212 377899999999999999998 89


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc----cEE
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV  168 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~  168 (217)
                      ++||+|+......|                         ..+                   |+|++|++++..    .++
T Consensus        82 ~~Gd~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~~~  117 (352)
T cd08247          82 KVGDEVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKSIT  117 (352)
T ss_pred             CCCCEEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccceeE
Confidence            99999986532110                         012                   389999999987    789


Q ss_pred             EcCCCCCccccccccchhhhHHHHHHHhc-CCCCCCEEEEEcC-ChhccC
Q 027867          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       169 ~~p~~~~~~~aa~l~~~~~ta~~a~~~~~-~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++|+++++++++.+++++.|||+++.+.. ++++|++|||+|+ |.+|++
T Consensus       118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~  167 (352)
T cd08247         118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRF  167 (352)
T ss_pred             ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHH
Confidence            99999999999999999999999776666 7999999999998 788865

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.88  E-value=4.3e-22  Score=168.12  Aligned_cols=155  Identities=27%  Similarity=0.375  Sum_probs=130.1

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      ||++++...+..  +++.+.+.|.++++||+||++++++|+.|+....+.++....|.++|||++|+|+++|.  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            578888776642  67778888888999999999999999999998887654445678999999999999995  57999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|+.....                        .+....                   |+|++|+.++.+.++++|+++
T Consensus        79 Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~  115 (320)
T cd08243          79 GQRVATAMGG------------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDSDL  115 (320)
T ss_pred             CCEEEEecCC------------------------CCCCCC-------------------cccceEEEcCHHHcEeCCCCC
Confidence            9999865310                        111112                   389999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++++.+++++.|||.++.+..++++|++|||+|+ |++|++
T Consensus       116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~  158 (320)
T cd08243         116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLA  158 (320)
T ss_pred             CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHH
Confidence            999999999999999998877788999999999998 899875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.88  E-value=5.4e-22  Score=167.85  Aligned_cols=154  Identities=29%  Similarity=0.435  Sum_probs=133.3

Q ss_pred             eeeEEeccCC--CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |||+++.+++  +.+++++++.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            6899999988  24999999999999999999999999999999887766533334678999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|++...                           ...+                   |+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~---------------------------~~~~-------------------~~~~s~~~~~~~~~~~ip~~~  114 (325)
T cd08271          81 GDRVAYHAS---------------------------LARG-------------------GSFAEYTVVDARAVLPLPDSL  114 (325)
T ss_pred             CCEEEeccC---------------------------CCCC-------------------ccceeEEEeCHHHeEECCCCC
Confidence            999986421                           0112                   389999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +..+++.+.+.+.++|.++.+..++++|++|+|+|+ |.+|++
T Consensus       115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~  157 (325)
T cd08271         115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSF  157 (325)
T ss_pred             CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHH
Confidence            999999998999999998778888999999999998 778865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.88  E-value=5.1e-22  Score=169.53  Aligned_cols=154  Identities=27%  Similarity=0.247  Sum_probs=130.2

Q ss_pred             eeeEEeccCCCC-----eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC
Q 027867           17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        17 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |||+++.+++++     +++++++.|.+.++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            579999988763     555677888889999999999999999999988776543456779999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|+....                           ...+                   |+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip  114 (336)
T cd08252          81 FKVGDEVYYAGD---------------------------ITRP-------------------GSNAEYQLVDERIVGHKP  114 (336)
T ss_pred             CCCCCEEEEcCC---------------------------CCCC-------------------ccceEEEEEchHHeeeCC
Confidence            999999975310                           0012                   389999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCC-----CCEEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++++.+++.+.|||.++.+...+.+     |++|+|+|+ |++|++
T Consensus       115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~  165 (336)
T cd08252         115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSI  165 (336)
T ss_pred             CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHH
Confidence            999999999999999999998777788877     999999997 899865

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.88  E-value=6e-22  Score=168.60  Aligned_cols=144  Identities=20%  Similarity=0.223  Sum_probs=117.5

Q ss_pred             eeeeEEeccC--CCC----eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        16 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      .||++++.++  +++    +++++.+.|+|+++||||||++++||+.|.+....  . ..+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~-~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L-NEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C-CCCCcEecceEEEEEec---CC
Confidence            4899999883  332    88899999999999999999999999987653221  1 24688999999999995   44


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc---c
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H  166 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~  166 (217)
                      ++|++||+|+..                                                    ++|++|++++.+   .
T Consensus        76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~  103 (329)
T cd08294          76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD  103 (329)
T ss_pred             CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence            679999999742                                                    168999999999   9


Q ss_pred             EEEcCCCCCc-----cccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          167 VVKVDPTVPP-----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       167 ~~~~p~~~~~-----~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ++++|++++.     ..++.+++++.|||+++.+..++++|++|||+|+ |++|+++
T Consensus       104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~a  160 (329)
T cd08294         104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLV  160 (329)
T ss_pred             eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHH
Confidence            9999999882     2234577899999998878899999999999997 9999753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.88  E-value=8.9e-22  Score=167.27  Aligned_cols=154  Identities=19%  Similarity=0.200  Sum_probs=126.6

Q ss_pred             eeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      ||+++...+.+  ++++++|.|.+.++||+||++++++|++|+..+.+.+.. ...|.++|||++|+|+.  .++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            68888877764  789999999999999999999999999999988886532 34578999999999998  56678999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|++....                        .|...+                   |++++|+.++.+.++++|+++
T Consensus        79 Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~~  115 (323)
T TIGR02823        79 GDEVIVTGYG------------------------LGVSHD-------------------GGYSQYARVPADWLVPLPEGL  115 (323)
T ss_pred             CCEEEEccCC------------------------CCCCCC-------------------ccceEEEEEchhheEECCCCC
Confidence            9999864320                        111122                   389999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHH--hcCCCCCC-EEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWR--TANVEVGS-TVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~-~VlI~Ga-G~vG~~  216 (217)
                      ++++++.+++.+.++|.++..  ...+.+|+ +|||+|+ |.+|++
T Consensus       116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~  161 (323)
T TIGR02823       116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSL  161 (323)
T ss_pred             CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHH
Confidence            999999998889999876533  34488898 9999998 999865

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.88  E-value=5.8e-22  Score=169.12  Aligned_cols=131  Identities=20%  Similarity=0.207  Sum_probs=111.7

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCC
Q 027867           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE  108 (217)
Q Consensus        29 l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~  108 (217)
                      |++++.+.|+|++|||||||.|++||+.|+.   +.+.....|.++|.|++|+|+++|+   .|++||+|+..       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            8889999999999999999999999997643   4333334578999999999999874   59999999742       


Q ss_pred             CccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc----CCCCCcccc-cccc
Q 027867          109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS  183 (217)
Q Consensus       109 c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~----p~~~~~~~a-a~l~  183 (217)
                                                                   ++|++|++++.+.+.++    |++++++++ +.++
T Consensus        86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~  120 (325)
T TIGR02825        86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG  120 (325)
T ss_pred             ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence                                                         16899999998888877    899999887 6788


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       184 ~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++.|||+++.+..++++|++|||+|+ |++|+++
T Consensus       121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a  155 (325)
T TIGR02825       121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV  155 (325)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence            899999998888899999999999997 9999753

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.88  E-value=8.6e-22  Score=167.43  Aligned_cols=155  Identities=18%  Similarity=0.196  Sum_probs=124.0

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC-CCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~-~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++  +++++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++|  +..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            689999888764  7889999999999999999999999999987654321 123457899999999999964  46799


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++....                        .|...+|                   +|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          79 PGDEVIVTSYD------------------------LGVSHHG-------------------GYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CCCEEEEcccc------------------------cCCCCCC-------------------cceeEEEEcHHHeEECCCC
Confidence            99999865320                        1222233                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHh--cCC-CCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRT--ANV-EVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~--~~~-~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+++++.|||.++...  ..+ ..+++|||+|+ |++|++
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~  162 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSL  162 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHH
Confidence            99999999999999998865432  333 34789999998 999865

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.88  E-value=6.6e-22  Score=166.52  Aligned_cols=146  Identities=23%  Similarity=0.288  Sum_probs=123.3

Q ss_pred             eeeEEeccCCC-CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||++++.+.+. .+++++.+.|.++++||+||+.++++|+.|++.....    ..+.++|||++|+|+++|+++..|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            58888877541 1777789999999999999999999999999876522    235789999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|+...                              .+                   |+|++|+.++.+.++++|++++
T Consensus        77 d~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~  107 (305)
T cd08270          77 ARVVGLG------------------------------AM-------------------GAWAELVAVPTGWLAVLPDGVS  107 (305)
T ss_pred             CEEEEec------------------------------CC-------------------cceeeEEEEchHHeEECCCCCC
Confidence            9997531                              11                   3899999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++.+++.+.|||+++.+.... +|++|+|+|+ |++|++
T Consensus       108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~  148 (305)
T cd08270         108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRF  148 (305)
T ss_pred             HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHH
Confidence            999999999999999976554444 6999999998 888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.88  E-value=1e-21  Score=167.14  Aligned_cols=151  Identities=28%  Similarity=0.342  Sum_probs=132.1

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      .||+++...+.+  +++++.+.|.|.++||+||+.++++|++|+.++.+.+.. ..+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence            378888887754  888889999999999999999999999999988776532 34678999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|.....                              .                   |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~  111 (331)
T cd08273          81 VGDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEG  111 (331)
T ss_pred             CCCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCC
Confidence            9999986421                              1                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+.+++.+||.++.+..++.+|++|+|+|+ |++|++
T Consensus       112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~  155 (331)
T cd08273         112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQA  155 (331)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHH
Confidence            9999999999999999998777788999999999998 899865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.87  E-value=1.6e-21  Score=164.29  Aligned_cols=156  Identities=29%  Similarity=0.359  Sum_probs=132.3

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      ||++++..++.+  +++.+++.|.+.+++|+|+++++++|++|+..+.+.+. ....|.++|||++|+|+++|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            578888776543  88889999999999999999999999999988877653 235688999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+.....                        .+ ...                   |++++|+.++.+.++++|++
T Consensus        81 ~Gd~v~~~~~~------------------------~~-~~~-------------------g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          81 VGDRVWLTNLG------------------------WG-RRQ-------------------GTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             CCCEEEEeccc------------------------cC-CCC-------------------cceeeEEEecHHHcEeCCCC
Confidence            99999875310                        00 012                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+.+++.+||.++.+..++.+|++|+|+|+ |++|++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~  160 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA  160 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHH
Confidence            9999999999999999998777789999999999997 888865

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.87  E-value=1.9e-21  Score=163.47  Aligned_cols=151  Identities=27%  Similarity=0.367  Sum_probs=130.0

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++.+  +++.+.+.|.+.++||+||+.++++|+.|+....+.++. ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            689999886543  777888888889999999999999999999888765432 34578999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+....                              +                   |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          81 VGDRVCALLA------------------------------G-------------------GGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             CCCEEEEecC------------------------------C-------------------CceeEEEEcCHHHhccCCCC
Confidence            9999975311                              1                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++.+++.+..++.++|.++.+...+.++++|+|+|+ |++|++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~  155 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTA  155 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHH
Confidence            9999999998899999998777788999999999998 888864

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.87  E-value=2.7e-21  Score=163.33  Aligned_cols=156  Identities=27%  Similarity=0.296  Sum_probs=131.8

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC-CCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~-~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++..++.+  +++++.+.|.+.++||+|+++++++|++|+.+..+... ....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999888764  77888888888999999999999999999988777543 123578899999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+....           +             .+ ..                   .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~-----------~-------------~~-~~-------------------~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          81 VGDEVYGCAG-----------G-------------LG-GL-------------------QGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             CCCEEEEccC-----------C-------------cC-CC-------------------CCceeEEEEecHHHcccCCCC
Confidence            9999986421           0             00 01                   148999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++..++.+++.+.+||.++.+..++++|++++|+|+ |.+|++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~  160 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHV  160 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHH
Confidence            9999999888899999998778899999999999997 888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.86  E-value=7.2e-21  Score=161.63  Aligned_cols=155  Identities=15%  Similarity=0.119  Sum_probs=125.5

Q ss_pred             eeeEEeccCCC--CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++.  .+++++.|.|+|+++||+||+.++++|++|...+.+.+.. ..+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            68999998774  3889999999999999999999999999999988776432 24578899999999999  7777899


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++....                        .+....                   |+|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          79 PGDRVVLTGWG------------------------VGERHW-------------------GGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             CCCEEEECCcc------------------------CCCCCC-------------------CcceeEEEEchHHeeeCCCC
Confidence            99999864210                        011112                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHH--HhcCCC-CCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~--~~~~~~-~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+++.+.+++.++.  +..... +|++|||+|+ |++|++
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~  162 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSV  162 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHH
Confidence            999999999888888887543  234555 6789999998 999875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.85  E-value=1.1e-20  Score=159.52  Aligned_cols=156  Identities=33%  Similarity=0.387  Sum_probs=130.4

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++...+.+  +++.+.+.|.+.+++|+|++.++++|+.|+.+..+.+.. ..+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            578888776543  777788888889999999999999999999887765432 24477899999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+..+..                         +...+                   |++++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~-------------------------~~~~~-------------------g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          81 VGDRVSVIPAA-------------------------DLGQY-------------------GTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCEEEecccc-------------------------ccCCC-------------------ccceEEEEechHhcEeCCCC
Confidence            99999865320                         01111                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++.+.+++.++|.++.+...+.++++|+|+|+ |++|++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~  160 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA  160 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHH
Confidence            9999999888999999998877888999999999998 888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.85  E-value=1e-20  Score=158.48  Aligned_cols=154  Identities=26%  Similarity=0.353  Sum_probs=129.3

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |||+++..++..  +++++.+.|.++++||+||+.++++|+.|+..+.+...   ....|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            678888877653  56677778888999999999999999999998877542   2345789999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      +++||+|+.....                           ..+                   |+|++|+.++.+.++++|
T Consensus        81 ~~~G~~V~~~~~~---------------------------~~~-------------------g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF---------------------------TRG-------------------GAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC---------------------------CCC-------------------CcceeEEEecHHHhccCC
Confidence            9999999864310                           011                   389999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++..++.+.+.+.++|.++.+...+.+|++|||+|+ |.+|++
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~  160 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSF  160 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Confidence            999999998888899999997766677999999999998 888865

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.84  E-value=2.4e-20  Score=157.41  Aligned_cols=139  Identities=27%  Similarity=0.416  Sum_probs=115.0

Q ss_pred             cCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhh-hcCCCC--CCCCeeeeecceEEEEEeCCCCCCCCCCCEEee
Q 027867           24 APGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVIP  100 (217)
Q Consensus        24 ~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~-~g~~~~--~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~  100 (217)
                      +.+. +++++++.|++.++||+||+.++++|++|+..+ .+....  ..+|.++|+|++|+|+++|++++++++||+|+.
T Consensus         3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            4455 999999999999999999999999999999887 665321  224789999999999999999999999999986


Q ss_pred             ecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccc
Q 027867          101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC  180 (217)
Q Consensus       101 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa  180 (217)
                      ...                                                  |+|++|+.++.+.++++|+++  ..++
T Consensus        82 ~~~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~  109 (312)
T cd08269          82 LSG--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQA  109 (312)
T ss_pred             ecC--------------------------------------------------CcceeeEEEchhheEECCCch--hhhH
Confidence            421                                                  389999999999999999988  2333


Q ss_pred             cccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       181 ~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      .+..+++++++++ +..++++|++|||+|+|++|++
T Consensus       110 ~~~~~~~~a~~~~-~~~~~~~~~~vlI~g~g~vg~~  144 (312)
T cd08269         110 FPGEPLGCALNVF-RRGWIRAGKTVAVIGAGFIGLL  144 (312)
T ss_pred             HhhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            3336788888865 4888999999999987888865

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.84  E-value=2e-20  Score=158.57  Aligned_cols=139  Identities=23%  Similarity=0.323  Sum_probs=121.8

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCC
Q 027867           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT  107 (217)
Q Consensus        29 l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~  107 (217)
                      +++++.+.|++.++||+||++++++|+.|..++.+.+.. ..+|.++|||++|+|+++|++++.+++||+|++.+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888999999999999999999999888776532 346789999999999999999999999999986421    


Q ss_pred             CCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhh
Q 027867          108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS  187 (217)
Q Consensus       108 ~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~  187 (217)
                                                .                   |+|++|+.++.+.++++|+++++++++.+.+...
T Consensus        90 --------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~  124 (323)
T cd05282          90 --------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL  124 (323)
T ss_pred             --------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence                                      1                   3899999999999999999999999998888999


Q ss_pred             hHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       188 ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +||.++.+...+.+|++|||+|+ |.+|++
T Consensus       125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~  154 (323)
T cd05282         125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRM  154 (323)
T ss_pred             HHHHHHHHhccCCCCCEEEEcccccHHHHH
Confidence            99998777788899999999998 888865

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.84  E-value=4.6e-20  Score=154.85  Aligned_cols=149  Identities=30%  Similarity=0.341  Sum_probs=126.4

Q ss_pred             eeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      ||+.+...+.+  +.+.+.+.+.+.++||+||+.++++|+.|+....+.++. .+|.++|||++|+|+.+|+++++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            46666655543  667777777788999999999999999999988776543 457789999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|+...                              ..                   |++++|+.++.+.++++|++++
T Consensus        80 ~~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~  110 (320)
T cd05286          80 DRVAYAG------------------------------PP-------------------GAYAEYRVVPASRLVKLPDGIS  110 (320)
T ss_pred             CEEEEec------------------------------CC-------------------CceeEEEEecHHHceeCCCCCC
Confidence            9998531                              01                   3899999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++.+.+...++|.++.+..++.+|++|||+|+ |++|++
T Consensus       111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~  152 (320)
T cd05286         111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLL  152 (320)
T ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Confidence            99999888899999998777889999999999997 898865

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=6.3e-20  Score=155.95  Aligned_cols=150  Identities=26%  Similarity=0.320  Sum_probs=127.6

Q ss_pred             eeEEeccCCC--CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        18 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      ||+++...+.  .+++.+.+.|.+.++||+||+.++++|+.|+.++.+.+.. ...|.++|||++|+|+.+|+++.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4566665543  2777788888889999999999999999999988776532 245778999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|+....                              +                   |+|++|+.++.+.++++|+++
T Consensus        81 G~~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~  111 (337)
T cd08275          81 GDRVMGLTR------------------------------F-------------------GGYAEVVNVPADQVFPLPDGM  111 (337)
T ss_pred             CCEEEEecC------------------------------C-------------------CeeeeEEEecHHHeEECCCCC
Confidence            999986421                              1                   289999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++++.+.+++.++|.++.+..++++|++|+|+|+ |.+|++
T Consensus       112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~  154 (337)
T cd08275         112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLA  154 (337)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHH
Confidence            999999888899999998878889999999999998 888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.82  E-value=1.4e-19  Score=152.57  Aligned_cols=151  Identities=28%  Similarity=0.350  Sum_probs=128.1

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+.+...+.+  +++++.+.|.+.+++|+||+.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            578888775554  667777777788999999999999999999887765432 34568999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+....                              +                   |++++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        81 VGDRVCALVA------------------------------G-------------------GGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CCCEEEEccC------------------------------C-------------------CcceeEEEecHHHcEeCCCC
Confidence            9999975310                              1                   28999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++..++.+.+++.++|.++.+..++++|++|+|+|+ |++|++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~  155 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTT  155 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHH
Confidence            9999998888899999998788899999999999997 888864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.82  E-value=1.2e-19  Score=153.05  Aligned_cols=141  Identities=26%  Similarity=0.290  Sum_probs=121.1

Q ss_pred             EEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCC
Q 027867           30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC  106 (217)
Q Consensus        30 ~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c  106 (217)
                      ++++.+.|.++++||+|+++++++|++|+..+.+.+.   ....+.++|||++|+|+++|+++.++++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            7788899999999999999999999999998877652   12346789999999999999999999999999864310  


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchh
Q 027867          107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV  186 (217)
Q Consensus       107 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~  186 (217)
                                               ...                   |+|++|+.++.+.++++|+++++++++.+.+++
T Consensus        93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                     011                   389999999999999999999999999999999


Q ss_pred             hhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       187 ~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      .+||+++.+..++++|++|+|+|+ |++|++
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~  159 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTF  159 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence            999998777777999999999998 888865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.81  E-value=2e-19  Score=154.80  Aligned_cols=140  Identities=28%  Similarity=0.455  Sum_probs=112.6

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-C---CCCeeeeecceEEEEEeCCC----CCCCCCCCEEee
Q 027867           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A---VFPRILGHEAIGVVESVGEN----VDGVVEGDVVIP  100 (217)
Q Consensus        29 l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~---~~p~ilG~e~~G~Vv~vG~~----v~~~~vGd~V~~  100 (217)
                      ...++.++|.|+++|++|++.++++|+.|++++.+.+.. .   .+|.+++.++.|++..++..    +..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            444788999999999999999999999999999988755 3   47766666666664443332    233455554432


Q ss_pred             ecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccc
Q 027867          101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC  180 (217)
Q Consensus       101 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa  180 (217)
                      .                              ..+                   |+|+||+++|...++++|+++++++||
T Consensus       100 ~------------------------------~~~-------------------g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 F------------------------------LSS-------------------GGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             c------------------------------cCC-------------------CceeeEEEcchhhccCCCCccChhhhh
Confidence            1                              112                   499999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHhc------CCCCCCEEEEEcC-ChhccCC
Q 027867          181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       181 ~l~~~~~ta~~a~~~~~------~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++.++.|||.+++...      ++++|++|||+|+ |+||++|
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~a  174 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAA  174 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHH
Confidence            99999999999999999      8999999999988 8999864

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.81  E-value=4.3e-19  Score=151.02  Aligned_cols=146  Identities=21%  Similarity=0.178  Sum_probs=117.1

Q ss_pred             eeeEEeccCCC------CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC---CCCCCCeeeeecceEEEEEeCC
Q 027867           17 CRAAIATAPGE------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        17 ~~a~~~~~~~~------~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~~~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      .||+++....+      .+++++++.|++.++||+||+.++++|+.|.....+..   .+...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46777755431      18889999999999999999999999998866554431   1112346889999999999996


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc-cc
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH  166 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~  166 (217)
                      .  +|++||+|+..                                                    ++|++|+.++. +.
T Consensus        82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~  107 (329)
T cd05288          82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG  107 (329)
T ss_pred             C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence            4  79999999742                                                    27999999999 99


Q ss_pred             EEEcCCCCC--cccccc-ccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       167 ~~~~p~~~~--~~~aa~-l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++|++++  +..++. +++++.|||+++.+...+.++++|||+|+ |++|++
T Consensus       108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~  161 (329)
T cd05288         108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSV  161 (329)
T ss_pred             cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHH
Confidence            999999985  445544 78899999998777788999999999997 899865

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.80  E-value=7.5e-19  Score=147.86  Aligned_cols=150  Identities=32%  Similarity=0.451  Sum_probs=125.2

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCC-CCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      |+|+++..++.+  +++.+.+ |.+. ++|++||+.++++|++|+..+.+.+.. ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            578888755443  7777777 7666 499999999999999999887776532 2346689999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|+....                              .                   |++++|+.++.+.++++|+
T Consensus        80 ~~G~~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~  110 (323)
T cd08241          80 KVGDRVVALTG------------------------------Q-------------------GGFAEEVVVPAAAVFPLPD  110 (323)
T ss_pred             CCCCEEEEecC------------------------------C-------------------ceeEEEEEcCHHHceeCCC
Confidence            99999986420                              1                   3899999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++..+++.+..+..+||.++.+..+++++++|+|+|+ |++|++
T Consensus       111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~  155 (323)
T cd08241         111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLA  155 (323)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Confidence            99998888888899999997776788999999999998 888864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08251 polyketide_synthase polyketide synthase

Probab=99.80  E-value=5.4e-19  Score=147.79  Aligned_cols=133  Identities=27%  Similarity=0.334  Sum_probs=115.0

Q ss_pred             cCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccC
Q 027867           36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS  114 (217)
Q Consensus        36 ~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~  114 (217)
                      .|.+.+++|+||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|+++++|++||+|+.....          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            57788999999999999999999988776532 3567899999999999999999999999999864210          


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHH
Q 027867          115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW  194 (217)
Q Consensus       115 g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~  194 (217)
                                        ..                   |+|++|+.++.+.++++|+++++++++.++..+.+||.++ 
T Consensus        72 ------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  113 (303)
T cd08251          72 ------------------SM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-  113 (303)
T ss_pred             ------------------CC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence                              11                   3899999999999999999999999999988999999965 


Q ss_pred             HhcCCCCCCEEEEEcC-ChhccC
Q 027867          195 RTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       195 ~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +..++++|++|+|+++ |.+|++
T Consensus       114 ~~~~~~~g~~vli~~~~~~~g~~  136 (303)
T cd08251         114 ARAGLAKGEHILIQTATGGTGLM  136 (303)
T ss_pred             HhcCCCCCCEEEEecCCcHHHHH
Confidence            6788999999999977 888864

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.77  E-value=2.5e-18  Score=142.23  Aligned_cols=123  Identities=28%  Similarity=0.279  Sum_probs=109.3

Q ss_pred             CeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCC
Q 027867           42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS  121 (217)
Q Consensus        42 ~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~  121 (217)
                      +||+||+.++++|++|++.+.+.++  .+|.++|||++|+|+++|++++.|++||+|+...                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            5899999999999999998887652  4578999999999999999999999999997642                   


Q ss_pred             CCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCC
Q 027867          122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV  201 (217)
Q Consensus       122 ~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~  201 (217)
                                  +                   |+|++|+.++.+.++++|+++++.+++.+.++..++|.++.+..++++
T Consensus        60 ------------~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          60 ------------P-------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             ------------c-------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                        1                   389999999999999999999999999988899999998777789999


Q ss_pred             CCEEEEEcC-ChhccC
Q 027867          202 GSTVVIFGL-GSIGLA  216 (217)
Q Consensus       202 g~~VlI~Ga-G~vG~~  216 (217)
                      |++|+|+|+ |.+|++
T Consensus       109 g~~vlv~g~~g~~g~~  124 (293)
T cd05195         109 GESVLIHAAAGGVGQA  124 (293)
T ss_pred             CCEEEEecCCCHHHHH
Confidence            999999986 888864

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.72  E-value=3.6e-17  Score=135.31  Aligned_cols=118  Identities=28%  Similarity=0.288  Sum_probs=104.9

Q ss_pred             EEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCC
Q 027867           46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF  125 (217)
Q Consensus        46 V~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~  125 (217)
                      ||+.++++|++|++.+.+.++   .|.++|||++|+|+++|++++.|++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            799999999999999877653   357899999999999999999999999997531                       


Q ss_pred             CCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEE
Q 027867          126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV  205 (217)
Q Consensus       126 ~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V  205 (217)
                              +                   |+|++|+.++.+.++++|+++++++++.+.+++.++|.++.+...+.+|++|
T Consensus        56 --------~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 --------P-------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             --------C-------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                    1                   3899999999999999999999999999999999999977788899999999


Q ss_pred             EEEcC-ChhccC
Q 027867          206 VIFGL-GSIGLA  216 (217)
Q Consensus       206 lI~Ga-G~vG~~  216 (217)
                      +|+|+ |.+|++
T Consensus       109 lv~g~~~~~g~~  120 (288)
T smart00829      109 LIHAAAGGVGQA  120 (288)
T ss_pred             EEecCCcHHHHH
Confidence            99997 888864

Enoylreductase in Polyketide synthases.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.70  E-value=1.2e-16  Score=132.01  Aligned_cols=135  Identities=24%  Similarity=0.251  Sum_probs=106.6

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeC--CCCCCCCCCCEEeeecccCC
Q 027867           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVG--ENVDGVVEGDVVIPHFLADC  106 (217)
Q Consensus        29 l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG--~~v~~~~vGd~V~~~~~~~c  106 (217)
                      |+++++++|+|+++|||||++|.+++|.....++.. +....|+-+|-...|.++...  ++...|++||.|+..     
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~-~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA-PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCC-cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence            999999999999999999999999999655444433 233456666666665555432  556789999999743     


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccc--cccccc
Q 027867          107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSC  184 (217)
Q Consensus       107 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~--aa~l~~  184 (217)
                                                                     .+|+||.+++.+.+.++++..-+..  ...|.+
T Consensus       101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm  133 (340)
T COG2130         101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM  133 (340)
T ss_pred             -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence                                                           2799999999999999976543333  335778


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          185 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       185 ~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +..|||.++++.+..++||+|+|.+| |++|..
T Consensus       134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsv  166 (340)
T COG2130         134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSV  166 (340)
T ss_pred             chHHHHHHHHHhcCCCCCCEEEEEecccccchH
Confidence            99999999999999999999999988 998864

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.52  E-value=3.3e-14  Score=118.34  Aligned_cols=99  Identities=29%  Similarity=0.432  Sum_probs=86.6

Q ss_pred             cCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 027867           63 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL  142 (217)
Q Consensus        63 g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~  142 (217)
                      |.++. .+|.++|||++|+|+++|+++++|++||+|+..                                         
T Consensus        14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------   51 (277)
T cd08255          14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------   51 (277)
T ss_pred             cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence            44444 588999999999999999999999999999753                                         


Q ss_pred             CCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          143 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       143 ~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                                 +.|++|++++.+.++++|+++++++++.+ +.+.|||+++ ...++++|++|||+|+|++|++
T Consensus        52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~  112 (277)
T cd08255          52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLL  112 (277)
T ss_pred             -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence                       16899999999999999999999998888 7899999975 5788999999999988988865

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.31  E-value=4.5e-11  Score=98.95  Aligned_cols=135  Identities=21%  Similarity=0.180  Sum_probs=97.0

Q ss_pred             eEEE--Eeec-CCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeee----cceEEEEEeCCCCCCCCCCCEEee
Q 027867           29 LVID--EVIV-DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGH----EAIGVVESVGENVDGVVEGDVVIP  100 (217)
Q Consensus        29 l~~~--~~~~-p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~----e~~G~Vv~vG~~v~~~~vGd~V~~  100 (217)
                      |.++  +.++ .++++++||||.+|.+..|.....+....+. ...|+.+|-    .++|+|++.  +-+++++||.|..
T Consensus        22 ~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g   99 (343)
T KOG1196|consen   22 FEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWG   99 (343)
T ss_pred             ceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEE
Confidence            4443  3443 3568899999999999988875544433222 122333322    789999995  4468999999953


Q ss_pred             ecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc--EEEcC--CCCCc
Q 027867          101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVD--PTVPP  176 (217)
Q Consensus       101 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~p--~~~~~  176 (217)
                      ..                                                    +|.||.+++.+.  .++++  .++++
T Consensus       100 ~~----------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pL  127 (343)
T KOG1196|consen  100 IV----------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPL  127 (343)
T ss_pred             ec----------------------------------------------------cceEEEEecCcchhcccCCCCCccCH
Confidence            21                                                    799999997653  44544  45565


Q ss_pred             cccc-cccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          177 NRAC-LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       177 ~~aa-~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      .... ++.++..|||..+++...+++|++|+|.|| |++|+++
T Consensus       128 s~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~  170 (343)
T KOG1196|consen  128 SYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLV  170 (343)
T ss_pred             hhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHH
Confidence            5544 577899999999999999999999999998 9999763

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.19  E-value=1e-11  Score=117.07  Aligned_cols=130  Identities=18%  Similarity=0.139  Sum_probs=108.1

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCC-------CeeeeecceEEEEEeCCCCCCCCCCCEE
Q 027867           29 LVIDEVIVD---PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF-------PRILGHEAIGVVESVGENVDGVVEGDVV   98 (217)
Q Consensus        29 l~~~~~~~p---~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~-------p~ilG~e~~G~Vv~vG~~v~~~~vGd~V   98 (217)
                      +++.+-|..   +..++.-+.-|.|+.||..|+.+..|..+....       ..++|-||+|+-          +-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence            566666644   235677799999999999999999998866333       368999999883          448999


Q ss_pred             eeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccc
Q 027867           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR  178 (217)
Q Consensus        99 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~  178 (217)
                      .....                              ..                   ++|+.+.++.+.+|.+|++..+++
T Consensus      1499 M~mvp------------------------------Ak-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP------------------------------AK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEeee------------------------------hh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence            64321                              11                   789999999999999999999999


Q ss_pred             cccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       179 aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      |+..++.+.|+|+|++.+...++||+|||+++ |++|++|
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAA 1569 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAA 1569 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHH
Confidence            99999999999999999999999999999965 9999875

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=95.29  E-value=0.019  Score=29.31  Aligned_cols=22  Identities=18%  Similarity=0.271  Sum_probs=16.0

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP   39 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~   39 (217)
                      |||++++++++ .++++++.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            79999999999 99999998865

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.26  E-value=0.00027  Score=62.85  Aligned_cols=107  Identities=16%  Similarity=0.133  Sum_probs=63.0

Q ss_pred             eeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeecc
Q 027867           72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  151 (217)
Q Consensus        72 ~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~  151 (217)
                      ..-|.|+++.+.+|+++++.     +|+..+.. |++|..|    ++.|.....   .|...++                
T Consensus        88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------  138 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------  138 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH----------------
Confidence            34689999999999999766     56666666 8888888    444544432   2323333                


Q ss_pred             ccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       152 ~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                         .|++++.++. .+..- -.++ ....++.   ..|...+.+.....++++|+|+|+|.+|.+
T Consensus       139 ---lf~~a~~~~k-~vr~~-t~i~-~~~vSv~---~~Av~la~~~~~~l~~~~VlViGaG~iG~~  194 (417)
T TIGR01035       139 ---LFQKAFSVGK-RVRTE-TDIS-AGAVSIS---SAAVELAERIFGSLKGKKALLIGAGEMGEL  194 (417)
T ss_pred             ---HHHHHHHHhh-hhhhh-cCCC-CCCcCHH---HHHHHHHHHHhCCccCCEEEEECChHHHHH
Confidence               8999988875 33220 0111 1111111   111111223344467899999999999864

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=91.10  E-value=0.62  Score=32.97  Aligned_cols=24  Identities=29%  Similarity=0.273  Sum_probs=19.5

Q ss_pred             eEEEEEeCCCCC----CCCCCCEEeeec
Q 027867           79 IGVVESVGENVD----GVVEGDVVIPHF  102 (217)
Q Consensus        79 ~G~Vv~vG~~v~----~~~vGd~V~~~~  102 (217)
                      -|+|+++|++..    .+++||+|+...
T Consensus        46 ~g~VvAVG~G~~~~~~~Vk~GD~Vl~~~   73 (100)
T PTZ00414         46 EGTVVAVAAATKDWTPTVKVGDTVLLPE   73 (100)
T ss_pred             eeEEEEECCCCccccceecCCCEEEEcC
Confidence            599999999753    399999998643

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=88.27  E-value=0.83  Score=31.85  Aligned_cols=25  Identities=32%  Similarity=0.219  Sum_probs=20.2

Q ss_pred             ceEEEEEeCCCC---------CCCCCCCEEeeec
Q 027867           78 AIGVVESVGENV---------DGVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v---------~~~~vGd~V~~~~  102 (217)
                      ..|+|+++|++.         ..+++||+|+...
T Consensus        35 ~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~~   68 (93)
T cd00320          35 QEGKVVAVGPGRRNENGERVPLSVKVGDKVLFPK   68 (93)
T ss_pred             eEEEEEEECCCeECCCCCCccccccCCCEEEECC
Confidence            579999999973         3599999998643

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=87.47  E-value=0.85  Score=31.96  Aligned_cols=25  Identities=32%  Similarity=0.258  Sum_probs=19.8

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD---------GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~---------~~~vGd~V~~~~  102 (217)
                      ..|+|+++|++..         .+++||+|+...
T Consensus        36 ~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~~   69 (95)
T PRK00364         36 QEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFGK   69 (95)
T ss_pred             ceEEEEEECCCeECCCCCEeecccCCCCEEEEcC
Confidence            4799999999642         499999998643

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=86.21  E-value=1.4  Score=30.66  Aligned_cols=25  Identities=32%  Similarity=0.238  Sum_probs=19.5

Q ss_pred             ceEEEEEeCCCCC----CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD----GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~----~~~vGd~V~~~~  102 (217)
                      ..|+|+++|+...    .+++||+|+...
T Consensus        36 ~~G~VvavG~g~~~~~~~Vk~GD~Vl~~~   64 (91)
T PRK14533         36 MKAEVVAVGKLDDEEDFDIKVGDKVIFSK   64 (91)
T ss_pred             ceEEEEEECCCCccccccccCCCEEEEcc
Confidence            4699999997532    499999998643

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=83.71  E-value=1.4  Score=36.35  Aligned_cols=53  Identities=21%  Similarity=0.142  Sum_probs=32.0

Q ss_pred             eeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCCh
Q 027867          155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS  212 (217)
Q Consensus       155 ~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~  212 (217)
                      +|.+|.. +...++.+++++++..+.--. ... ....+ . ..+.++++||-+|.|.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l-~-~~~~~~~~VLDiGcGs  130 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEAL-E-KLVLPGKTVLDVGCGS  130 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHH-H-hhcCCCCEEEEeCCcH
Confidence            4556644 667788899988887654221 111 11112 1 1256899999999864

>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []

Probab=81.23  E-value=2  Score=29.84  Aligned_cols=26  Identities=35%  Similarity=0.304  Sum_probs=18.4

Q ss_pred             ceEEEEEeCC--------CC-CCCCCCCEEeeecc
Q 027867           78 AIGVVESVGE--------NV-DGVVEGDVVIPHFL  103 (217)
Q Consensus        78 ~~G~Vv~vG~--------~v-~~~~vGd~V~~~~~  103 (217)
                      ..|+|+++|+        .+ ..+++||+|+...+
T Consensus        35 ~~G~VvaVG~G~~~~~g~~~~~~vk~GD~Vl~~~~   69 (93)
T PF00166_consen   35 NQGKVVAVGPGRYNENGEEVPMDVKVGDKVLFPKY   69 (93)
T ss_dssp             EEEEEEEE-SEEETTTSSEEETSS-TTSEEEEETT
T ss_pred             ceeEEEEcCCccccCCCcEeeeeeeeccEEecccc
Confidence            5799999999        32 36999999987643

These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=80.75  E-value=0.27  Score=41.99  Aligned_cols=49  Identities=24%  Similarity=0.314  Sum_probs=35.2

Q ss_pred             cEEEcCCCCCccccccccchhhhHHHHHHHhcCC----CCCCEEEEEcCChhccC
Q 027867          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----EVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       166 ~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlI~GaG~vG~~  216 (217)
                      .++++|+.+..+.++... +.+.++.++ +.+..    .++.+|+|+|+|.+|.+
T Consensus       140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~  192 (311)
T cd05213         140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGEL  192 (311)
T ss_pred             HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHH
Confidence            556778888888877765 566666654 33332    47899999999999864

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	217
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		4e-47
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		9e-46
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		1e-41
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-41
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-41
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-40
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		6e-39
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		6e-39
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		3e-38
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		4e-38
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		4e-37
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		8e-37
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		1e-35
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		1e-35
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-35
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-35
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-35
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-35
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-35
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-35
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-35
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		4e-35
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		1e-34
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		1e-34
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-34
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		8e-34
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-32
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-31
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-31
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-31
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-31
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-12
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-06
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-06
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-05
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		5e-05
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-04
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		8e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 129/212 (60%), Gaps = 8/212 (3%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T G+ I C+AA+A  P +PLVI++V V PP + EVR++I+ T+LCH+D   W  KD   +
Sbjct: 2   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLC----SAFPF 125
           FP ILGHEA                    IP + A+C EC  C+S K NLC    SA   
Sbjct: 62  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 121
Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL CG
Sbjct: 122 GI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCG 177
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V TG+GA W TA VE GS V IFGLG++GLAV
Sbjct: 178 VPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAV 209

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  179 bits (454), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           S+ T G+ I C+AA+A  P +PLVI++V V PP + EVRV+++ T+LCH+D   W  KD 
Sbjct: 17  SSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDP 76
Query: 67  PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FP +LGHEA                    IP + A+C EC  C+S K NLC      
Sbjct: 77  EGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 136
Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DP  P  + CLL CG
Sbjct: 137 TGVGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V TG+GA W TA VE GS V +FGLG++GLAV
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAV 227

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  165 bits (418), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 118/208 (56%), Gaps = 1/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           +A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    
Sbjct: 1   SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHE                     IP ++  C EC  C + K NLC         
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 121 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA  TA +E GS   +FGLG +GLAV
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAV 207

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/207 (42%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGHE                     IP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAV 217
           GAA  TA +E GS   +FGLG +GLAV
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAV 206

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/207 (42%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGHE                     IP ++  C EC  C + K NLC          
Sbjct: 62  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 122 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAV 217
           GAA  TA +E GS   +FGLG +GLAV
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAV 207

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 116/207 (56%), Gaps = 1/207 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH                      IP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAV 217
           GAA  TA +E GS   +FGLG +GLAV
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAV 206

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+E+ V PP + EVR++I+ T +C +D    K     + 
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA +T  V+ GST V+FGLG +GL+V
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSV 206

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+E+ V PP + EVR++I+ T +C +D    K     + 
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA +T  V+ GST V+FGLG +GL+V
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSV 206

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE                     IP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            GAA  TA VE GST  +FGLG++GLA
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLA 207

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  154 bits (388), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           S  T GK I+C+AAIA   G+PL I+EV V PP +HEVR++II TSLCH+D T    K  
Sbjct: 1   SMGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFE 60
Query: 67  PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
              FP I+GHEA                    IP +   C +C  C S   NLC      
Sbjct: 61  GLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNL 120
Query: 127 ISP----WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 182
            SP     +  D+TSRF   +G+ ++HF   S+FS+YTV+   ++ K+D      R CLL
Sbjct: 121 KSPASDQQLMEDKTSRFT-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLL 179
Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
            CG STG GAA   A V  GST  +FGLG +GL+
Sbjct: 180 GCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLS 213

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  150 bits (380), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K +  P+ 
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSK 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+                   IP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            GAA  TA V  GST  +FGLG +G +
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFS 206

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  150 bits (378), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 117/211 (55%), Gaps = 6/211 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +CH+D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKK-KAL 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
           FP +LGHE                     IP F   C  C  C S   NLC     FK  
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
            S+G GAA  TA V  GST  +FGLG +GL+
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLS 210

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS-GTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KAL 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
           FP +LGHE                     IP F   C  C  C S   NLC     FK  
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
            S+G GAA  TA V  GST  +FGLG +GL+
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLS 210

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A 
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F+  C +C  C+  +GNLC       + 
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            STG G+A + A V  GST  +FGLG +GL+V
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSV 206

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A 
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F+  C +C  C+  +GNLC       + 
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            STG G+A + A V  GST  +FGLG +GL+V
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSV 206

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG  GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSV 207

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP     C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG  GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSV 207

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  140 bits (352), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD       +    
Sbjct: 2   TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS-GNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF    G+ IHHFV VS+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRF-TCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSV 207

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +CH+D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            G+A   A V  GST  +FGLG +GL+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLS 206

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            G+A   A V  GST  +FGLG +GL+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLS 206

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            G+A   A V  GST  +FGLG +GL+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLS 206

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
            G+A   A V  GST  +FGLG +GL+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLS 206

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  131 bits (330), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSD--VTFWKMKDFP 67
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C +D  V    M    
Sbjct: 2   TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM---V 58
Query: 68  AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
              P ILGHEA                    IP  +  C +C  C++ + N C       
Sbjct: 59  TPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSN 118
Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
                +D TSRF   R + IHHF+ +S+FS+YTV+D   V K+D   P  + CL+ CG S
Sbjct: 119 PQGTLQDGTSRFT-CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           TG G+A   A V  GST  +FGLG +GL+
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLS 206

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 3/199 (1%)
Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEA 78
           AA+    G    +  + +  P   EV V+++ T +CH+D+     K +P   P +LGHE 
Sbjct: 9   AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEG 67
Query: 79  IXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTS 137
                               +  +   C +C  C +     CS F  +  S        +
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
                +G    HF + SSF+ Y +    + VKV   VP      L CG+ TG GA     
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186
Query: 198 NVEVGSTVVIFGLGSIGLA 216
            V   S+ V +G G++GL+
Sbjct: 187 KVTPASSFVTWGAGAVGLS 205

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 27/181 (14%)
Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF--PR 72
           ++ +AA+     EPL I++V +  P   EV +RI    +C +D+  WK  +    F  P 
Sbjct: 2   VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61
Query: 73  ILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           ILGHE                     +     D T C  CR  K N+C     +I P   
Sbjct: 62  ILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLT-CRYCREGKFNICKN---QIIP--- 114
Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGVSTGVG 191
                      G+T +       FSEY ++  +  +VK++   P   A L   G +T +G
Sbjct: 115 -----------GQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMG 157
Query: 192 A 192
           A
Sbjct: 158 A 158

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 26/190 (13%)
Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAIXXXXXX 85
           L +++  +  P   EV +++    +C SDV ++   ++ DF    P ++GHEA       
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 86  XXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
                               C  C  C+  K NLC    F  +P  P D         G 
Sbjct: 76  GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--PDD---------GN 124
Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205
              ++V  + F            K+   V      LL   +S GV  A R A V++G+TV
Sbjct: 125 LARYYVHAADFCH----------KLPDNVSLEEGALLE-PLSVGV-HACRRAGVQLGTTV 172
Query: 206 VIFGLGSIGL 215
           ++ G G IGL
Sbjct: 173 LVIGAGPIGL 182

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 35/204 (17%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRI 73
           +AA+  A G+PL IDEV +  P   +++V I  + +CH+D+      W +K  P   P I
Sbjct: 27  KAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP---PFI 83
Query: 74  LGHEAIX-XXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE +                    IP     C  C  C      LC            
Sbjct: 84  PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE----------- 132
Query: 133 RDQTSRFKDLRGETIHHFVSVS-SFSEYTVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGV 190
                       E ++   SV+  F+EY V D   V  +   +  N  A +L  GV+  V
Sbjct: 133 ------------EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--V 178
Query: 191 GAAWRTANVEVGSTVVIFGLGSIG 214
               +  + + G  VVI G+G +G
Sbjct: 179 YKGLKVTDTKPGDWVVISGIGGLG 202

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 21/191 (10%)
Query: 27  EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRILGHEAIXXXXX 84
           EP+V+D +    P   E+ +++    LCHSD+    M    +    P  LGHE +     
Sbjct: 12  EPVVVD-IPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAE 70
Query: 85  XXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 144
                           +    C  C  C   + N C                +R  DL G
Sbjct: 71  LGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYC----------------TRAADL-G 113
Query: 145 ETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGS 203
            T     S  S +EY ++D A H+V +    P   A L   G++     +     +  GS
Sbjct: 114 ITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS 173
Query: 204 TVVIFGLGSIG 214
           T V+ G+G +G
Sbjct: 174 TAVVIGVGGLG 184

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 29/201 (14%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFPRILG 75
           +AA+  A G PL IDEV V  P   +V+V+I  + +CH+D+      D+P     P I G
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD-GDWPVKPTLPFIPG 62
Query: 76  HEAIXXXXXXXXXXXXXXXX-XXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +                    +P   + C  C  C      LC            + 
Sbjct: 63  HEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE-----------KQ 111
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV-DPTVPPNRACLLSCGVSTGVGAA 193
           Q + +    G           + EY V D  +V  + D       A +L  GV+  V   
Sbjct: 112 QNTGYSVNGG-----------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVT--VYKG 158
Query: 194 WRTANVEVGSTVVIFGLGSIG 214
            +  +   G  VVI G+G +G
Sbjct: 159 LKVTDTRPGQWVVISGIGGLG 179

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 28/191 (14%)
Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXX 88
           L I E  +  P++ EVRV++    +C SD   ++  +  A +PR++GHE           
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 89  XXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
                         +  C  C  C   K N+C+                         +H
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVL-------------------GVH 132
Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS--CGVSTGVGAAWRTANVEVGSTVV 206
              +   FSEY V+   +  K+   V    A ++      +   G    T N     TV+
Sbjct: 133 ---ADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTEN----DTVL 185
Query: 207 IFGLGSIGLAV 217
           ++G G IGL +
Sbjct: 186 VYGAGPIGLTI 196

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	217
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-107
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-105
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-105
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-104
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-104
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-80
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-68
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-45
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-36
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-35
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	5e-35
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	5e-32
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-30
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	7e-30
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-30
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	3e-29
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-28
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-27
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	4e-27
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	5e-27
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-26
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	8e-26
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	7e-25
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	7e-22
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-19
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-19
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-16
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-16
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-15
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	4e-15
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-14
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	3e-14
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	5e-14
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	5e-14
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-13
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-11
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	6e-11
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-10
3gms_A	340	Putative NADPH:quinone reductase; structural genom	8e-10
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-09
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-09
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-09
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-08
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-08
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-08
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-08
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-07
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-07
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-07
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	5e-07
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	8e-07
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-06
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-06
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	7e-06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-04
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	8e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  312 bits (802), Expect = e-107
 Identities = 97/207 (46%), Positives = 129/207 (62%), Gaps = 1/207 (0%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179

Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAV 217
           GAA  TA +E GS   +FGLG +GLAV
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAV 206

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  307 bits (789), Expect = e-105
 Identities = 93/208 (44%), Positives = 130/208 (62%), Gaps = 1/208 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA  TA VE GST  +FGLG++GLA 
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAA 208

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  306 bits (787), Expect = e-105
 Identities = 95/212 (44%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KAL 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC        P
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 130 W----MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            S+G GAA  TA V  GST  +FGLG +GL+ 
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSA 211

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  303 bits (779), Expect = e-104
 Identities = 92/208 (44%), Positives = 123/208 (59%), Gaps = 2/208 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            G+A + A V  GST  +FGLG +GL+V
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSV 207

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  303 bits (778), Expect = e-104
 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 3/208 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K    P+ 
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII-PSK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            GAA  TA V  GST  +FGLG +G + 
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSA 207

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  243 bits (624), Expect = 1e-80
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 3/206 (1%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
           +     AA+    G    +  + +  P   EV V+++ T +CH+D+     + +P   P 
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRD-QKYPVPLPA 61

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           +LGHE  G++E++G NV  +  GD V+  +   C +C  C +     CS F  +      
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD 120

Query: 133 RDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
            +               HF + SSF+ Y +    + VKV   VP      L CG+ TG G
Sbjct: 121 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAV 217
           A      V   S+ V +G G++GL+ 
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSA 206

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  213 bits (544), Expect = 2e-68
 Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 19/210 (9%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            ++  A +     +PLV  E  +       + V I+   +C SDV  ++ +D     P I
Sbjct: 15  GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 74

Query: 74  LGHEAIGVVESVGENVDG-----VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
           LGHE  G V  V           +  GD+++ +    C EC  C+  K            
Sbjct: 75  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 134

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGVS 187
             + R   S +  LRG           +S + VLD    V+KV      +   +  C  +
Sbjct: 135 --INRG-CSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGA 181

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           T   A         G TVVI G G +GL  
Sbjct: 182 TAYHAFDEYPESFAGKTVVIQGAGPLGLFG 211

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  152 bits (386), Expect = 3e-45
 Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 20/202 (9%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRILG 75
           +A   T  G   V+ ++    P   E+ +++    LCHSD+    M    +    P  LG
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE +G V  +GE V G   GD V  +    C  C  C   + N C+              
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRA------------ 109

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAW 194
                   G T     S  S +EY ++D A  +     + P  A  L+  G++     + 
Sbjct: 110 -----ADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164

Query: 195 RTANVEVGSTVVIFGLGSIGLA 216
               +  GST V+ G+G +G  
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHV 186

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  129 bits (327), Expect = 2e-36
 Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 30/207 (14%)

Query: 18  RAAIATAPGEPLVIDEVIV-DPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRI 73
           +AA      +PL I++V         +V VRI    +CH+D+   +    +      P  
Sbjct: 17  KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           LGHE +G +E V E V+G+ +GD VI H       C+ CR+ +   C    F        
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP------- 129

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR---ACLLSCGVSTGV 190
                     G  I        F+E+       V+K+   +   +      L+    T  
Sbjct: 130 ----------GLNID-----GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAY 174

Query: 191 GAAWRT-ANVEVGSTVVIFGLGSIGLA 216
            A  +    +  G+ V I G+G +G  
Sbjct: 175 RAVKKAARTLYPGAYVAIVGVGGLGHI 201

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  126 bits (318), Expect = 4e-35
 Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 35/212 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
           RA      G+PL + E+ V  P   +V +++    +CHSDV   +        ++D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +  +    
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--- 118

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                         G          +++EY ++     +     +    A  L+C   T 
Sbjct: 119 --------------GINFD-----GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159

Query: 190 VGAAWRTANVEVGSTVVIF----GLGSIGLAV 217
             A  R A+++   T+++     GLG++ + +
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQI 190

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  125 bits (317), Expect = 5e-35
 Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 29/206 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--MKDFPAVFPRILG 75
           +AA+     EPL I++V +  P   EV +RI    +C +D+  WK          P ILG
Sbjct: 5   KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE  G +  VGE +  V +GD V+ +       C  CR  K N+C               
Sbjct: 65  HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKN------------- 110

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA--- 192
               + + G+T +       FSEY ++  +  +    ++ P  A  L+   +T +GA   
Sbjct: 111 ----QIIPGQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQ 161

Query: 193 AWRTANVEVGSTVVIFGLGSIG-LAV 217
           A    +      V++ G+G +    +
Sbjct: 162 ALPFISKFAEPVVIVNGIGGLAVYTI 187

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  118 bits (298), Expect = 5e-32
 Identities = 44/203 (21%), Positives = 74/203 (36%), Gaps = 36/203 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A    + G  + +  V +  P   ++ V++    +C +D       +FP+  P  LGHE
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH-GEFPSTPPVTLGHE 82

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G+V   G  V  +  G      P+    C  C  C++ + NLC               
Sbjct: 83  FCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLCRNLRA---------- 130

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGA 192
                   G           F+EY ++      ++  T+ P        L+C +      
Sbjct: 131 -------IGIHRD-----GGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----H 173

Query: 193 AWRTANVEVGSTVVIFGLGSIGL 215
               + ++ GSTV I G G IGL
Sbjct: 174 GVDLSGIKAGSTVAILGGGVIGL 196

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  112 bits (283), Expect = 4e-30
 Identities = 52/209 (24%), Positives = 76/209 (36%), Gaps = 43/209 (20%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           RA    AP E L + +  V  P   E+ VR+   S+C +D+  WK           P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVI--PHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  GVVE+VG  V     GD V    H +  C  C  CR+   ++C            
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVC------------ 107

Query: 133 RDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGV 186
                   + +       + V     F+EY V+   +       +P   A +       V
Sbjct: 108 -------LNTQ------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV 154

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGL 215
                      +   G +V+I G G IGL
Sbjct: 155 -----HTVYAGSGVSGKSVLITGAGPIGL 178

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  112 bits (282), Expect = 7e-30
 Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFPRILG 75
           +AA+  A G PL IDEV V  P   +V+V+I  + +CH+D+      D+P     P I G
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD-GDWPVKPTLPFIPG 62

Query: 76  HEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +G V +VG  V  V EGD V +P   + C  C  C      LC            + 
Sbjct: 63  HEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC-----------EKQ 111

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           Q +      G +++       + EY V D  +V  +   V       + C GV+      
Sbjct: 112 QNT------GYSVN-----GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV--YKG 158

Query: 194 WRTANVEVGSTVVIFGLGSIG-LAV 217
            +  +   G  VVI G+G +G +AV
Sbjct: 159 LKVTDTRPGQWVVISGIGGLGHVAV 183

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  112 bits (282), Expect = 7e-30
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 37/204 (18%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           ++ +    G  + + E  I +  +  EVRV+I  + LC SD+     K+    +P  LGH
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF-KNGAHYYPITLGH 59

Query: 77  EAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           E  G +++VG  VD +  GD    +P     C  C  C     + C+ + F  S    RD
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAKYDFIGS---RRD 114

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVG 191
                    G           F+EY V+   +V  +   +P         ++ G+     
Sbjct: 115 ---------G----------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL----- 150

Query: 192 AAWRTANVEVGSTVVIFGLGSIGL 215
            A+  A       V+I G G+IGL
Sbjct: 151 HAFHLAQGCENKNVIIIGAGTIGL 174

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  110 bits (277), Expect = 3e-29
 Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 30/205 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILG 75
           +AA+     EPL I EV     +  EV VRI    +CH+D+      D+P     P I G
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH-GDWPVKPKLPLIPG 60

Query: 76  HEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +G+VE VG  V  +  GD V IP   + C  C  C S +  LC              
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-----------EHQ 109

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           + +      G ++        ++EY      +VVK+   +    A  + C GV+T    A
Sbjct: 110 KNA------GYSVD-----GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--YKA 156

Query: 194 WRTANVEVGSTVVIFGLGSIG-LAV 217
            +    + G  V I+G+G +G +AV
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAV 181

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  109 bits (274), Expect = 1e-28
 Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 33/206 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
            +A+     + L +++  +  P   EV +++    +C SDV +++   + DF    P ++
Sbjct: 6   LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHEA G V  VG+NV  + +GD V       C  C  C+  K NLC    F  +P  P D
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--PDD 122

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVG 191
                                 + Y V       K+   V      L   LS GV     
Sbjct: 123 GN-------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV----- 158

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAV 217
            A R A V++G+TV++ G G IGL  
Sbjct: 159 HACRRAGVQLGTTVLVIGAGPIGLVS 184

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  105 bits (264), Expect = 3e-27
 Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 33/213 (15%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFP 67
           A       + +   PG+ L ++   +  P  +EV +R+    +C SDV +W+   + +F 
Sbjct: 2   AAAKPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFI 60

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
              P +LGHEA G VE VG +V  +  GD V     A       C+  + NL  +  F  
Sbjct: 61  VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA 120

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSC 184
           +P  P D                        +   + A   K+   V      L   LS 
Sbjct: 121 TP--PDDGN-------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV 159

Query: 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           G+      A R   V +G  V++ G G IG+  
Sbjct: 160 GI-----HACRRGGVTLGHKVLVCGAGPIGMVT 187

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  104 bits (263), Expect = 4e-27
 Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 44/209 (21%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRIL 74
            A + T PG    + EV V  P   EV ++++ TS+C +D+  ++  ++       P+I+
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  G V  +G  V+G+  GD   V  H    C +C  CR  + ++C            
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYVSVETHI--VCGKCYACRRGQYHVCQN---------- 113

Query: 133 RDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGV 186
                               V     F+EY V+   ++ K   ++PP  A L   L   V
Sbjct: 114 ---------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV 158

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGL 215
                          G +V+I G G +GL
Sbjct: 159 D----TVLAG--PISGKSVLITGAGPLGL 181

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  104 bits (262), Expect = 5e-27
 Identities = 38/206 (18%), Positives = 65/206 (31%), Gaps = 29/206 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +A       +  V+ E     P S E  VR +   +C +D                  +L
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHEA+GVV  V  N   + EGD  V                  + ++     +     + 
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSCGV-STG 189
                      G            SE+      ++V++  +       +  +S    +  
Sbjct: 120 AH---------G----------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALE 160

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGL 215
              A R+A     S+  + G GS+GL
Sbjct: 161 HAYASRSAFDWDPSSAFVLGNGSLGL 186

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  103 bits (260), Expect = 1e-26
 Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 29/202 (14%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFP 71
           P   +  I       L   ++ V  P ++E+ + +  + +CH+D+  W   D+P     P
Sbjct: 3   PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH-GDWPLPVKLP 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
            + GHE  GVV  +GENV G   GD   I      C  C  C     + C          
Sbjct: 62  LVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC---------- 111

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTG 189
            P    S      G T        SF +Y   D      +       +   + C G++  
Sbjct: 112 -PHADLS------GYTHD-----GSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV- 158

Query: 190 VGAAWRTANVEVGSTVVIFGLG 211
              A ++AN+  G  V I G  
Sbjct: 159 -YKALKSANLMAGHWVAISGAA 179

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  101 bits (254), Expect = 8e-26
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 39/217 (17%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVFP 71
           +A I   P   + + +V      +  ++++R I   +C +D                   
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            +LGHEAIGVVE   E+  G  +GD+V+P     C  C  C   + + C    F  +   
Sbjct: 62  LVLGHEAIGVVE---ESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSCGV--- 186
             D         G             E+   D  ++VK+  ++         L+      
Sbjct: 119 KMD---------G----------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159

Query: 187 ------STGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
                    V              V++ G G IG+  
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLF 196

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 99.2 bits (248), Expect = 7e-25
 Identities = 49/208 (23%), Positives = 74/208 (35%), Gaps = 37/208 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +  +  +   P +      +     EV V +  T +C SDV FWK   +         +L
Sbjct: 17  QHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVL 76

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE+ G V +V  +V  +  GD V I P  +  C  C  C + + N C    F  +P +P
Sbjct: 77  GHESAGEVIAVHPSVKSIKVGDRVAIEPQVI--CNACEPCLTGRYNGCERVDFLSTPPVP 134

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTG 189
                      G              Y         K+   +      +   LS  +   
Sbjct: 135 -----------G----------LLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVAL--- 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
             A  + A V +G  V+I G G IGL  
Sbjct: 170 --AGLQRAGVRLGDPVLICGAGPIGLIT 195

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 91.3 bits (227), Expect = 7e-22
 Identities = 43/242 (17%), Positives = 67/242 (27%), Gaps = 60/242 (24%)

Query: 5   KPSNKTAGKPIQCRAAIATAPGEPLVIDEVIV-DPPNSHEVRVRIICTSLCHSDVTFWK- 62
           K   K     +    +      E + ++EV         E+ +++    +C SDV   + 
Sbjct: 19  KLGPKDIEGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQT 77

Query: 63  ------MKDFPAVFPRILGHEAIGVVESVGENV------DGVVEGD--VVIPHFLADCTE 108
                 +      FP  LGHE  GVV   G              G+           C  
Sbjct: 78  DEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGH 135

Query: 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIA 165
           C  C     N C                            + +  +   +F+EY  +D  
Sbjct: 136 CRPCAEGFPNHCEN-------------------------LNELGFNVDGAFAEYVKVDAK 170

Query: 166 HVVKV-------DPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
           +   +       +         L    S   +       R   +  G  VVI G G IGL
Sbjct: 171 YAWSLRELEGVYEGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGL 227

Query: 216 AV 217
           A 
Sbjct: 228 AA 229

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 34/207 (16%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRIL 74
           RA +  A G P  L + ++ V  P   EVRVR+   +L H DV   K +       P +L
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  GVV++VG  V+G   GD V+ +    C  C  C + + NLC  +           
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY----------- 110

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                  + GE  H      +++EY VL  A++      +    A  +     T    AW
Sbjct: 111 ------QILGEHRH-----GTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT----AW 155

Query: 195 R----TANVEVGSTVVIFGLGS-IGLA 216
           +       V  G  V++   GS + +A
Sbjct: 156 QMVVDKLGVRPGDDVLVMAAGSGVSVA 182

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 43/207 (20%), Positives = 69/207 (33%), Gaps = 35/207 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +     + G+ +   E     P   +  VR +  + C SD+              ILGHE
Sbjct: 2   KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           A+G V  VG  V     GD VV+P  +         +                       
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVP-AITPDWRTSEVQRGYHQHSG--------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHV-------VKVDPTVPPNRACLLSCGVSTG 189
                +        V    F E+      HV         +   +P   A ++   ++TG
Sbjct: 105 ----GMLAGWKFSNVKDGVFGEF-----FHVNDADMNLAHLPKEIPLEAAVMIPDMMTTG 155

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLA 216
              A   AN+++G TV + G+G +GL 
Sbjct: 156 FHGA-ELANIKLGDTVCVIGIGPVGLM 181

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 54/233 (23%)

Query: 12  GKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDV---------- 58
               +  A + T   +P   + +D+V V      E  V ++ +S+ ++ V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --------TFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECV 110
                       +     +   ++G +  GVV   G  V+    GD V+ H L+   E  
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESS 157

Query: 111 GCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170
              +             +   P  +   F+   G            +E  ++    ++  
Sbjct: 158 DGHND------------TMLDPEQRIWGFETNFG----------GLAEIALVKSNQLMPK 195

Query: 171 DPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGS-IGLA 216
              +    A       ST    A+R       A ++ G  V+I+G    +G  
Sbjct: 196 PDHLSWEEAAAPGLVNST----AYRQLVSRNGAGMKQGDNVLIWGASGGLGSY 244

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 74.9 bits (184), Expect = 5e-16
 Identities = 37/212 (17%), Positives = 62/212 (29%), Gaps = 50/212 (23%)

Query: 25  PGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV------------------TFWKMKDF 66
             + L + EV +      EV V ++ +S+ ++ V                          
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
                 +LG +  GVV   G  V     GD VI H      E        G L       
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVD-EQEPATHGDGMLG------ 158

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                     +  +    ET          +EY V+  + ++     +    A +     
Sbjct: 159 ----------TEQRAWGFETNF-----GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 187 STGVGAAWR------TANVEVGSTVVIFGLGS 212
            T    A+R       A ++ G  V+I+G   
Sbjct: 204 GT----AYRMLVSDRGAQMKQGDIVLIWGASG 231

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 72.2 bits (178), Expect = 3e-15
 Identities = 46/215 (21%), Positives = 76/215 (35%), Gaps = 33/215 (15%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
            P++     A      L             +VR +++   +CHSD+   K     +++P 
Sbjct: 13  HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL 72

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFKISPWM 131
           + GHE +G V  VG  V  V  GD V    L   C  C  C +   N C           
Sbjct: 73  VPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL------ 126

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST-- 188
               T       G   +       +S + V +  ++++    +P +    L C G++   
Sbjct: 127 ----TYASIYHDGTITY-----GGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYS 177

Query: 189 -----GVGAAWRTANVEVGSTVVIFGLGSIG-LAV 217
                G+           G  + I GLG +G +AV
Sbjct: 178 PLKYFGLDEP--------GKHIGIVGLGGLGHVAV 204

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 71.9 bits (177), Expect = 4e-15
 Identities = 42/206 (20%), Positives = 65/206 (31%), Gaps = 40/206 (19%)

Query: 20  AIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRIL 74
             +T       L + E  V     H++ VR +  SL + D     ++        FP + 
Sbjct: 30  EWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDLAFPFVP 87

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             +  GVVE+VG++V     GD VI  F     + +   + +                  
Sbjct: 88  ASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET------LGGAHP 141

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                                 SEY VL     V    ++    A  L C   T    AW
Sbjct: 142 GV-------------------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT----AW 178

Query: 195 R----TANVEVGSTVVIFGLGSIGLA 216
                  ++  G  VV+ G G + L 
Sbjct: 179 FALVEKGHLRAGDRVVVQGTGGVALF 204

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 71.5 bits (176), Expect = 6e-15
 Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 26/215 (12%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
                ++ +A  A +  +PL   ++    P  ++V++ I    +CHSD+   + +    V
Sbjct: 16  YKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTV 75

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
           +P + GHE +G V +VG+ V+    GD+V +   +  C  C  C     N C        
Sbjct: 76  YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG--- 132

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV-DPTVPPNRACLLSC-GV 186
                  T                   +S+  V+   +V+++  P         L C G+
Sbjct: 133 -------TYNSPTPDEPGHTL----GGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGI 181

Query: 187 STGVGAAW---RTANVEVGSTVVIFGLGSIG-LAV 217
           +T     +   R      G  V + G+G +G + +
Sbjct: 182 TT-----YSPLRHWQAGPGKKVGVVGIGGLGHMGI 211

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 35/175 (20%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
           P Q  A       E  V +          +V VR+   ++  SD     M+   A     
Sbjct: 9   PPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAF 65

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           LG +  G V +VG +V  +  GD V                           ++ P  P 
Sbjct: 66  LGTDYAGTVVAVGSDVTHIQVGDRVY----------------------GAQNEMCPRTPD 103

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
                                +FS+YTV       K+   +   +A  L  G+ST
Sbjct: 104 Q-------------------GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGIST 139

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 47/188 (25%), Positives = 71/188 (37%), Gaps = 24/188 (12%)

Query: 37  DPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96
                H V ++++ T++C SD    +     A    +LGHE  G V   G +V+ +  GD
Sbjct: 29  GKKIEHGVILKVVSTNICGSDQHMVR-GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGD 87

Query: 97  -VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS- 154
            V +P F   C  C  C+     +C                +R     G         + 
Sbjct: 88  LVSVP-FNVACGRCRSCKEMHTGVCL-----------TVNPARAGGAYGYV--DMGDWTG 133

Query: 155 SFSEYTVLDIAHV--VKVDPTVPPNRAC----LLSCGVSTGVGAAWRTANVEVGSTVVIF 208
             +EY ++  A    +K+               LS  + TG   A  TA V  GSTV + 
Sbjct: 134 GQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVA 192

Query: 209 GLGSIGLA 216
           G G +GLA
Sbjct: 193 GAGPVGLA 200

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 30/213 (14%)

Query: 18  RAAIATAPGEPLVIDEV----IVDP--PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           ++ +     + L ++ V    +        H V ++++ T++C SD   ++   F     
Sbjct: 4   KSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR-GRFIVPKG 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
            +LGHE  G V   G +V+ +  GD V +P F   C  C  C+  + ++C       +  
Sbjct: 62  HVLGHEITGEVVEKGSDVELMDIGDLVSVP-FNVACGRCRNCKEARSDVCEN-----NLV 115

Query: 131 MPRDQTSRFKDLRGETIHHF-------VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 183
            P      F    G  +  +       V V  +++Y +L      K           L+S
Sbjct: 116 NPDADLGAF----GFDLKGWSGGQAEYVLV-PYADYMLLKFGD--KEQAMEKIKDLTLIS 168

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
             + TG      +A V+ GS V I G G +G  
Sbjct: 169 DILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRC 200

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 68.8 bits (169), Expect = 5e-14
 Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 33/215 (15%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
              +     A  P   L      +      +V +RIIC  +CH+D+   K     + +P 
Sbjct: 6   AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           + GHE +G V  VG +V     GD+V +   +  C  C  C       C    +      
Sbjct: 66  VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW------ 119

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST-- 188
               +     + G+          F++ TV+    VVK+   +   +A  L C GV+   
Sbjct: 120 ----SYNDVYINGQPTQ-----GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYS 170

Query: 189 -----GVGAAWRTANVEVGSTVVIFGLGSIG-LAV 217
                G+           G    I GLG +G + V
Sbjct: 171 PLSHFGLKQP--------GLRGGILGLGGVGHMGV 197

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 24/210 (11%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            +Q +     +  E     +         +V + I+   +CHSD+     +    ++P I
Sbjct: 2   RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61

Query: 74  LGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE  G+++ VG+ V     GDVV +  F+  C  C  C+  +   C+   F       
Sbjct: 62  PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYD---- 117

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVG 191
                       E          +S   V+D  +V+ VD   P  +   L C G++T   
Sbjct: 118 ----CLDSFHDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT--- 165

Query: 192 AAW---RTANVEVGSTVVIFGLGSIG-LAV 217
             +   + + V  G+ V + G G +G +AV
Sbjct: 166 --YSPLKFSKVTKGTKVGVAGFGGLGSMAV 193

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 53/209 (25%)

Query: 14  PIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAV 69
           P + RA +    G+P   + +  + +      +VRV+++   +  SD+   +        
Sbjct: 24  PARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE 83

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P + G+E +  V +VG NV G+  GD VI              +  G            
Sbjct: 84  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLG------------ 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                                    ++    V     +++V   +P   A  L     T 
Sbjct: 121 -------------------------TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTA 155

Query: 190 VGAAWRTANVEVGSTVVIFGL-GSIGLAV 217
                    ++ G +V+       +G AV
Sbjct: 156 YRMLMDFEQLQPGDSVIQNASNSGVGQAV 184

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 15/101 (14%)

Query: 15  IQCRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF--------- 60
           I  +A + T  GEP         E+  D    +EV V+ + + +  SD+           
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 61  -WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP 100
                          G+E +  V  VG NV  +  GD VIP
Sbjct: 62  AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIP 102

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 59.5 bits (145), Expect = 6e-11
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVF 70
          +A      G P  L + +        +++ +++   SL   D      + +  K      
Sbjct: 8  KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 71 PRILGHEAIGVVESVGENVDGVVEGDVVI 99
          P  LG++  G V  +G +V+ V  GD V+
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKVM 96

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-----MKDFPAVFPR 72
           AA+      P V+ ++    P   +V V+I  +     D    K             P 
Sbjct: 9  IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLD---AKIRAGEAPHAQQPLPA 65

Query: 73 ILGHEAIGVVESVGENVDGVVEGDVV 98
          ILG +  G V +VG  VD    GD V
Sbjct: 66 ILGMDLAGTVVAVGPEVDSFRVGDAV 91

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 56.4 bits (137), Expect = 8e-10
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 18  RAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRI 73
           +       G P   L ++   ++P   +EV VR++   +  SD+             P I
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIP 100
            G+E +G+VE+VG  V   + G  V+P
Sbjct: 66  PGYEGVGIVENVGAFVSRELIGKRVLP 92

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 35/210 (16%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRIL 74
           A  +    +     +    P   H++ ++I    +C SD+      W     P V     
Sbjct: 11  AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLV-V--- 66

Query: 75  GHEAIGVVESVGENVD-GVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE +G V  +G   + G+  G  V +   +  C EC  C++     C+ F         
Sbjct: 67  GHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVT------- 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVG 191
              T       G      VS   ++ Y  +    VV +   +P + A  L C G++    
Sbjct: 120 ---TYSQPYEDGY-----VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV--- 168

Query: 192 AAW---RTANVEVGSTVVIFGLGSIG-LAV 217
             +          G  V I GLG IG +  
Sbjct: 169 --YSPLVRNGCGPGKKVGIVGLGGIGSMGT 196

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 3/84 (3%)

Query: 18 RAAIATAPG---EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
                A       + ++ V +    + ++ V+     +   D  F K          + 
Sbjct: 3  EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 75 GHEAIGVVESVGENVDGVVEGDVV 98
          G +  GV+  VG  VD  + G  V
Sbjct: 63 GVDGAGVIVKVGAKVDSKMLGRRV 86

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF---WKMKDFPAVFPR 72
           AA+    G P   V +EV V  P   +VR+R     +   D                P 
Sbjct: 3  MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62

Query: 73 ILGHEAIGVVESVGENVDGVVEGDVV 98
          ++G EA  VVE VG  V     G+ V
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERV 88

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
                  G P  L   E     P  +E++V      +   D       +     P+   
Sbjct: 3  TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPS--- 59

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
            LG EA G+V  VG  V  +  GD V
Sbjct: 60 -GLGTEAAGIVSKVGSGVKHIKAGDRV 85

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
          +    +  G P  L   +   + P    V VR     L   D  +    +     P+   
Sbjct: 3  KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPS--- 59

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
            LG E  GVVE+VG+ V     GD V
Sbjct: 60 -GLGAEGAGVVEAVGDEVTRFKVGDRV 85

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
          +  +    G    +  ++  V   +  E+ ++   T + + +  F K   +P   P +LG
Sbjct: 10 KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGI-YPCEKPYVLG 68

Query: 76 HEAIGVVESVGENVDGVVEGDVV 98
           EA G V + G+ V     GD V
Sbjct: 69 REASGTVVAKGKGVTNFEVGDQV 91

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 18 RAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFP 71
          +A     P             + +  P  HE+ V+I   S+   D    K +    +  P
Sbjct: 4  KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD---TKQRLMDVSKAP 60

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
          R+LG +AIGVVESVG  V    +GD+V
Sbjct: 61 RVLGFDAIGVVESVGNEVTMFNQGDIV 87

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 18  RAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
           +A     P        L+  E+    P  H++ V +   S+   D    +         +
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK 83

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVV 98
           ++G++A G+V +VG +V     GD V
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDEV 109

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 25/103 (24%)

Query: 18  RAAIATAPGEP--LVIDEVIVDP--PNSHEVRVRIICTSLCHSDVTFWKM---------- 63
            A +    G+   L   + ++ P     +EV V++   S+   D     M          
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPID---VNMRSGYGATALN 79

Query: 64  --------KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98
                   K     FP  LG +  GVV   G +V     GD V
Sbjct: 80  MKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-----DFPAVF 70
          RA +    G    L +    +  P   E+++R+    L   D+    M      D P   
Sbjct: 5  RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL----MVRQGNIDNPPKT 60

Query: 71 PRILGHEAIGVVESVGENVDGVVEGDVVI 99
          P + G E  G+VE++G++V G   GD V+
Sbjct: 61 PLVPGFECSGIVEALGDSVKGYEIGDRVM 89

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 11  AGKPIQCRAAIATAPGEP--LVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMK-DF 66
           A      RA      G P  L +   I  P P  H+V +++    +   +          
Sbjct: 24  ATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR 83

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99
             + P   G +  GV+E+VG+N     +GD V 
Sbjct: 84  KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVF 116

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 34/226 (15%), Positives = 62/226 (27%), Gaps = 67/226 (29%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           +  E    ++  + +              +  +  V  P   ++ VR     +  SD+ +
Sbjct: 13  LGTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINY 72

Query: 61  WKMKD---FPAVFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKK 116
                        P  +G E IG V ++G +       G  V                  
Sbjct: 73  --SAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA----------------- 113

Query: 117 GNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176
                                            +++  SF+EYTV+  +    V P+V P
Sbjct: 114 ---------------------------------YMAPGSFAEYTVVPASIATPV-PSVKP 139

Query: 177 NRACLLSCGVSTGVGAAW----RTANVEVGSTVVIFG-LGSIGLAV 217
               LL  G +     A+        +  G  V++    G  G   
Sbjct: 140 EYLTLLVSGTT-----AYISLKELGGLSEGKKVLVTAAAGGTGQFA 180

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 47.6 bits (114), Expect = 8e-07
 Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRIL 74
           R     + G P  +VI +  +      EV VR     +   D+   +     P     IL
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPIL 89

Query: 75  GHEAIGVVESVGENVDGVVEGDVVI 99
           G E  G +  VG  V G   GD V 
Sbjct: 90  GLELSGEIVGVGPGVSGYAVGDKVC 114

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 19/115 (16%), Positives = 32/115 (27%), Gaps = 29/115 (25%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF------------ 60
             +Q R+ I ++    L +D +    P   EV +RI  + L  SD+              
Sbjct: 4   SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKA 63

Query: 61  -----------------WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98
                             +           +G+E  GVV   G +          
Sbjct: 64  SGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT 118

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 6   PSNKTAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM 63
                   P   +A  A +   P  LV  +V       + V V +    +C  D    K 
Sbjct: 11  TLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKG 70

Query: 64  K-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99
           +       P + G E  GVV S  E   G+  GD V+
Sbjct: 71  EYQLKMEPPFVPGIETAGVVRSAPE-GSGIKPGDRVM 106

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 9   KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFP 67
              G       +   A    L    + V  P   +V +++   S+  SDV F K +   P
Sbjct: 17  VGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQP 76

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVE-GDVVI 99
            V  R  G E +G + + G+        G  V 
Sbjct: 77  RVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVA 109

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88
           LV +     P    EVR+ +    +   D     +  +P      LG E  GVV   G  
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDA-LIALGMYPG--VASLGSEGAGVVVETGPG 282

Query: 89  VDGVVEGDVVI 99
           V G+  GD V+
Sbjct: 283 VTGLAPGDRVM 293

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRIL 74
            A     PG P  L + EV    P   EV +++  ++L  +D+   +   D P     IL
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNIL 83

Query: 75  GHEAIGVVESVGENVDGVV-EGDVV 98
           G EA G V  +G    G    GD  
Sbjct: 84  GLEASGHVAELGPGCQGHWKIGDTA 108

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 3e-04
 Identities = 28/203 (13%), Positives = 53/203 (26%), Gaps = 80/203 (39%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           ++ ++        ID +I+            +          FW +              
Sbjct: 43  KSILSKE-----EIDHIIMSKDA--VSGTLRL----------FWTLLSKQE--------- 76

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
                E V + V+ V+  +     FL                    P K     P   T 
Sbjct: 77  -----EMVQKFVEEVLRINY---KFLMS------------------PIKTEQRQPSMMTR 110

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
            + + R      +     F++Y V  +   +K+       R  LL               
Sbjct: 111 MYIEQRDRL---YNDNQVFAKYNVSRLQPYLKL-------RQALL--------------- 145

Query: 198 NVEVGSTVVIFGLGSIG---LAV 217
            +     V+I G+   G   +A+
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVAL 168

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGH 76
          +A +    G PL + ++        EV +R+    L  +D              P I G 
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61

Query: 77 EAIGVVESVGENVDGVVEG 95
          E +GVV   G     +V  
Sbjct: 62 EVVGVV--EGRRYAALVPQ 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	217
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.98
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.98
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.97
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.97
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.97
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.97
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.96
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.96
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.96
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.95
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.93
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.67
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.71
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.07
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	91.72
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	88.43
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	87.81
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	87.53

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4.7e-44  Score=310.39  Aligned_cols=206  Identities=51%  Similarity=0.915  Sum_probs=183.0

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      .++|++|||+++++++++++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCC
Confidence            45788999999999988899999999999999999999999999999999999877678899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      +|++||+|++.+..+|+.|.+|++|++++|++.......|.. .+|..+|. .+|.+.+++.+.|+|+||++++++.+++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~  161 (378)
T 3uko_A           83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFS-VNGKPIYHFMGTSTFSQYTVVHDVSVAK  161 (378)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             cCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccc-cCCcccccccCCcceEeEEEechhheEE
Confidence            999999999999999999999999999999987543223332 34433343 3566777777888999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +|+++++++||++++++.|||+++++.+++++|++|||+|+|++|+++
T Consensus       162 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a  209 (378)
T 3uko_A          162 IDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAV  209 (378)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHH
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHH
Confidence            999999999999999999999988889999999999999999999753

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=3.9e-42  Score=297.71  Aligned_cols=204  Identities=44%  Similarity=0.797  Sum_probs=172.7

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ..+|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++|+
T Consensus         4 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~   82 (373)
T 1p0f_A            4 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVT   82 (373)
T ss_dssp             TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             cCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCCC
Confidence            45788999999999986699999999999999999999999999999999998765 46899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      +|++||+|++.+..+|+.|.+|++|++++|++.....+.|...+|...+. ..|.+.+++...|+|+||++++++.++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~i  161 (373)
T 1p0f_A           83 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKI  161 (373)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccc-cCCcccccccCCccceeEEEEchhhEEEC
Confidence            99999999999999999999999999999998754211233222211111 11223333334579999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      |++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|+++
T Consensus       162 P~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a  207 (373)
T 1p0f_A          162 DPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSA  207 (373)
T ss_dssp             CTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHH
T ss_pred             CCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            9999999 999999999999988888999999999999999999753

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.1e-42  Score=299.23  Aligned_cols=205  Identities=47%  Similarity=0.816  Sum_probs=172.6

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      +.|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            57899999999999866999999999999999999999999999999999987665568999999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|++.+..+|+.|.+|++|++++|++.....+.|...+|...+. ..|...+++.+.|+|+||++++++.++++|
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCccccc-ccccccccccCCccceeEEEEchhheEECC
Confidence            9999999999989999999999999999987542100122222211110 112233333345699999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|+++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a  206 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAV  206 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHH
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHH
Confidence            9999999999999999999988888999999999999999999753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=9.5e-42  Score=295.38  Aligned_cols=204  Identities=44%  Similarity=0.787  Sum_probs=172.5

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      .++|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++. .+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC-CCCcccCcCceEEEEEECCCCC
Confidence            457899999999999866999999999999999999999999999999999987654 3899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      +|++||||++.+..+|+.|.+|++|++++|++.....+.|...+|...+. ..|.+.+++...|+|+||++++++.++++
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~i  160 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCccccc-ccccccccccCCccCeeEEEEchHHeEEC
Confidence            99999999999999999999999999999998754211233222211110 11222333334469999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++
T Consensus       161 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~  206 (374)
T 2jhf_A          161 DAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLS  206 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHH
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            9999999999999999999998888899999999999999999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-42  Score=295.49  Aligned_cols=204  Identities=46%  Similarity=0.801  Sum_probs=173.3

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhh-hhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVT-FWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~-~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      ..+|++|||+++.+++++++++++|.|+|+++||||||++++||++|++ ++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCC
Confidence            4578899999999998679999999999999999999999999999999 8888765 4689999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++|++||+|++.+..+|+.|.+|++|++++|++.....+.|...+|...+. ..|.+.+++...|+|+||++++++.+++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~  160 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEE-ETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccc-cCCcccccccCCccceeEEEEchhheEE
Confidence            999999999999989999999999999999988653211233223311111 1122334444457999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++
T Consensus       161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~  207 (374)
T 1cdo_A          161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLA  207 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHH
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            99999999999999999999998888899999999999999999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.3e-41  Score=294.77  Aligned_cols=205  Identities=46%  Similarity=0.787  Sum_probs=171.0

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      .+.|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|. +...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCc
Confidence            357889999999999866999999999999999999999999999999999886 4446899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCC----CCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP----FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~----~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      +|++||||++.+..+|+.|++|++|++++|++..    +..+.|...+|..++. ..|.+.+++...|+|+||++++++.
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~  160 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEAN  160 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccc-cCCcccccccCCccceeEEEecccc
Confidence            9999999999999999999999999999998764    1000122222211110 1122233333346999999999999


Q ss_pred             EEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       167 ~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|+++
T Consensus       161 ~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a  211 (376)
T 1e3i_A          161 LARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSA  211 (376)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHH
T ss_pred             EEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence            999999999999999999999999988888999999999999999999753

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.5e-41  Score=289.84  Aligned_cols=201  Identities=28%  Similarity=0.506  Sum_probs=165.2

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++|++|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            56799999999886699999999999999999999999999999999998765 36799999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCcee-eeccccceeeeeEEeccccEEEcCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI-HHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~-~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      +||+|++.+ .+|+.|++|++|++++|++.......|...+|..++....|... .++...|+|+||++++++.++++|+
T Consensus        83 ~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (371)
T 1f8f_A           83 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  161 (371)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             CCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence            999999999 99999999999999999875421001111112111100001000 1122346999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++
T Consensus       162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~  205 (371)
T 1f8f_A          162 DVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLS  205 (371)
T ss_dssp             TSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHH
T ss_pred             CCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            99999999999999999998878899999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-41  Score=290.45  Aligned_cols=194  Identities=27%  Similarity=0.410  Sum_probs=160.7

Q ss_pred             CCCCCCCCCCCCCCceeeeEEeccCCCCeEEEEeecCC-CCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeee
Q 027867            1 MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGH   76 (217)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~   76 (217)
                      |-++|+-... ..|++|||+++.+++++++++++|.|+ |+++||||||++++||++|++++.|.++   ...+|.++||
T Consensus         1 ~~~~~~~~~~-~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~   79 (359)
T 1h2b_A            1 MRIEQDFSQS-LGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH   79 (359)
T ss_dssp             -----------------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCC
T ss_pred             Cchhhhhhhc-CChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCc
Confidence            5567776543 357789999999998669999999999 9999999999999999999999998764   3468999999


Q ss_pred             cceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeecccccee
Q 027867           77 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF  156 (217)
Q Consensus        77 e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~  156 (217)
                      |++|+|+++|++|++|++||+|+..+..+|+.|.+|++|++++|++...   .|...+|                   +|
T Consensus        80 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~  137 (359)
T 1h2b_A           80 ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GF  137 (359)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SS
T ss_pred             CceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccCCCC-------------------cc
Confidence            9999999999999999999999988888999999999999999988754   3444444                   99


Q ss_pred             eeeEEeccccEEEcCCCCCccccc---cccchhhhHHHHHHHh-cCCCCCCEEEEEcCChhccCC
Q 027867          157 SEYTVLDIAHVVKVDPTVPPNRAC---LLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       157 a~~~~v~~~~~~~~p~~~~~~~aa---~l~~~~~ta~~a~~~~-~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +||++++++.++++|+++++++||   .+++++.|||+++.+. +++++|++|||+|+|++|+++
T Consensus       138 aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~a  202 (359)
T 1h2b_A          138 AEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIA  202 (359)
T ss_dssp             BSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHH
T ss_pred             cceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHH
Confidence            999999999999999999999998   6888899999976555 899999999999999999753

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.4e-40  Score=285.59  Aligned_cols=190  Identities=22%  Similarity=0.358  Sum_probs=162.1

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      +++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|+
T Consensus         2 ~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence            36799999999987799999999999999999999999999999999999877678899999999999999999999999


Q ss_pred             CCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           94 EGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        94 vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      +||+|++.+. .+|+.|.+|++|++++|+ ...   .+...+.   .  ..    ......|+|+||++++.+.++++|+
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~~~~---~--~~----~~~~~~G~~aey~~v~~~~~~~iP~  148 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYDCLD---S--FH----DNEPHMGGYSNNIVVDENYVISVDK  148 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSSSEE---G--GG----TTEECCCSSBSEEEEEGGGCEECCT
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCc-ccc---ccccccc---c--cc----cCCcCCccccceEEechhhEEECCC
Confidence            9999988654 789999999999999998 322   1211110   0  00    0001124999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++||.+++++.|||+++ +..++++|++|||+|+|++|+++
T Consensus       149 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a  192 (348)
T 3two_A          149 NAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMA  192 (348)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHH
T ss_pred             CCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHH
Confidence            999999999999999999965 56699999999999999999753

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.5e-40  Score=286.37  Aligned_cols=183  Identities=22%  Similarity=0.370  Sum_probs=163.5

Q ss_pred             CCCCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867            9 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus         9 ~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      +...+|++|||+++.+++. ++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++
T Consensus        16 ~~~~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~   93 (370)
T 4ej6_A           16 ENLYFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSA   93 (370)
T ss_dssp             -----CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTT
T ss_pred             cccccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCC
Confidence            3445888999999999986 99999999999999999999999999999999998864 478999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  168 (217)
                      |++|++||+|++.+..+|+.|.+|+.|++++|++...   .|...+|                   +|+||++++.+.++
T Consensus        94 v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~  151 (370)
T 4ej6_A           94 VRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIHRDG-------------------GFAEYVLVPRKQAF  151 (370)
T ss_dssp             CCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCCCCC-------------------cceEEEEEchhhEE
Confidence            9999999999999999999999999999999998765   4444555                   99999999999999


Q ss_pred             EcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       169 ~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++|+++++++|| +..+++|||+++ +.+++++|++|||+|+|++|+++
T Consensus       152 ~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a  198 (370)
T 4ej6_A          152 EIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLT  198 (370)
T ss_dssp             EECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHH
T ss_pred             ECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            999999999998 455999999966 88999999999999999999753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.5e-40  Score=283.01  Aligned_cols=179  Identities=30%  Similarity=0.426  Sum_probs=163.3

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      +|||+++++++++++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            5999999998877999999999999999999999999999999999998764 468999999999999999999999999


Q ss_pred             CCEEe-eecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           95 GDVVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        95 Gd~V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      ||+|+ ..+..+|+.|.+|++|++++|++...   .|...+|                   +|+||++++++.++++|++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  139 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYSVNG-------------------GYGEYVVADPNYVGLLPDK  139 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEECCTT
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCCCCC-------------------cceeEEEechHHEEECCCC
Confidence            99995 56678999999999999999998765   4444555                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++||.+++++.|||+++ +..++++|++|||+|+|++|+++
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a  182 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVA  182 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHH
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHH
Confidence            99999999999999999965 77899999999999999999753

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=8.6e-40  Score=281.88  Aligned_cols=184  Identities=22%  Similarity=0.334  Sum_probs=160.5

Q ss_pred             CCceeeeEEeccCCCCeEEEE--eecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDE--VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~--~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      +|++|||+++.+++.++++++  +|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            567899999999875699999  999999999999999999999999999998765556899999999999999999999


Q ss_pred             -CCCCCCEEeeec-ccCCCCCccccCCCCCCCCCC-CCCCC---CCCCCCCCcccccCCCceeeeccccceeeeeEEecc
Q 027867           91 -GVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAF-PFKIS---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (217)
Q Consensus        91 -~~~vGd~V~~~~-~~~c~~c~~c~~g~~~~c~~~-~~~~~---~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  164 (217)
                       +|++||+|++.+ ..+|+.|.+|++|++++|++. .....   .|...+                   |+|+||+++++
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~  143 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVHE  143 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEEG
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCC-------------------CcceeEEEEch
Confidence             999999996544 578999999999999999875 11100   022233                   39999999999


Q ss_pred             ccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       165 ~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +.++++|+++++++||.+++++.|||+++.+ +++++|++|||+|+|++|++
T Consensus       144 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~  194 (360)
T 1piw_A          144 HFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSM  194 (360)
T ss_dssp             GGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHH
T ss_pred             hheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHH
Confidence            9999999999999999999999999997654 89999999999999999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.2e-39  Score=279.73  Aligned_cols=178  Identities=28%  Similarity=0.477  Sum_probs=147.5

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhc-CCC--CCCCCeeeeecceEEEEEeCCCCC
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM-KDF--PAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g-~~~--~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      +++|||+++.+++..++++++|.|+|+++||||||++++||++|++++.| .++  ...+|.++|||++|+|+++|++|+
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            35699999999984499999999999999999999999999999999988 432  246789999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      +|++||+|++.+..+|+.|.+|++|++++|++...   .|...+|                   +|+||++++++.++++
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~i  139 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------VFAEYAVVPAQNIWKN  139 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEE---TTTSSCC-------------------SSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCCCCC-------------------cCcceEEeChHHeEEC
Confidence            99999999999999999999999999999988754   3433444                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++||++. +++|||+++ +.+++ +|++|||+|+|++|++
T Consensus       140 P~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~  182 (348)
T 2d8a_A          140 PKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLL  182 (348)
T ss_dssp             CTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHH
T ss_pred             CCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHH
Confidence            9999999999886 888999976 78889 9999999999999975

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-39  Score=277.20  Aligned_cols=181  Identities=25%  Similarity=0.397  Sum_probs=161.7

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      +|.+|||+++++++.+++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            5778999999999855999999999999999999999999999999999887642 467999999999999999999999


Q ss_pred             CCCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           92 VVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        92 ~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      |++||+|++.+. ..|+.|.+|+.|++++|++...   .|...+|                   +|+||++++++.++++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~i  139 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYTHDG-------------------SFQQYATADAVQAAHI  139 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEETTTSEEE
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccCCCC-------------------cceeEEEeccccEEEC
Confidence            999999998664 4599999999999999987654   3433444                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      |+++++++|+.+++++.|||+++ +..++++|++|||+|+ |++|++
T Consensus       140 P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Ga~ggiG~~  185 (347)
T 2hcy_A          140 PQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSL  185 (347)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHH-HTTTCCTTCEEEEETTTSHHHHH
T ss_pred             CCCCCHHHHHHHhhhHHHHHHHH-HhcCCCCCCEEEEECCCchHHHH
Confidence            99999999999999999999965 5568999999999999 899975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.3e-39  Score=280.81  Aligned_cols=180  Identities=26%  Similarity=0.375  Sum_probs=160.6

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecC--------CCCCCeEEEEEeEeeCChhhhhhhhcCC---CCCCCCeeeeecceE
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVD--------PPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIG   80 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p--------~~~~~eVlV~v~a~~i~~~D~~~~~g~~---~~~~~p~ilG~e~~G   80 (217)
                      ++|++|||+++.+++. ++++++|.|        +|+++||||||++++||++|++++.+..   ....+|.++|||++|
T Consensus         4 ~~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G   82 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAG   82 (363)
T ss_dssp             -CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEE
T ss_pred             CCcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEE
Confidence            4678899999999887 999999999        9999999999999999999999887432   124679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeee
Q 027867           81 VVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEY  159 (217)
Q Consensus        81 ~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~  159 (217)
                      +|+++|++|++|++||+|++.+..+|+.|.+|++|.+++|++..+   .|.. .+|                   +|+||
T Consensus        83 ~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~G-------------------~~aey  140 (363)
T 3m6i_A           83 EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVPG-------------------LLRRY  140 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSCC-------------------SCBSE
T ss_pred             EEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCCc-------------------cceeE
Confidence            999999999999999999999999999999999999999998765   2222 334                   99999


Q ss_pred             EEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          160 TVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       160 ~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++.+.++++|+ +++++||++. +++|||+++ +.+++++|++|||+|+|++|+++
T Consensus       141 ~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a  195 (363)
T 3m6i_A          141 VNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLIT  195 (363)
T ss_dssp             EEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHH
T ss_pred             EEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHH
Confidence            9999999999999 9999999884 889999976 88999999999999999999753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.7e-39  Score=274.36  Aligned_cols=174  Identities=28%  Similarity=0.478  Sum_probs=158.2

Q ss_pred             eeeEEeccCCCCeEEEEeecCC-CCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++++++. ++++|+|+|+ +++|||||||+|+|||++|++.+.+..+. .+|+++|||++|+|+++|++|++|++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~-~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH-YYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS-SSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC-CCCccccEEEEEEEEEECCCcccccCC
Confidence            89999999998 9999999998 57999999999999999999998887543 789999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|++.+...|+.|..|..|.+++|.+...   .|...+|                   +|+||++++++.++++|++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~l~  136 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG-------------------GFAEYIVVKRKNVFALPTDMP  136 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECCTTSC
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCccc---ccCCCCc-------------------ccccccccchheEEECCCCCC
Confidence            999999999999999999999999998765   4555555                   999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++||++. .+.++++ +.+..++++|++|||+|+|++|++
T Consensus       137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~  175 (346)
T 4a2c_A          137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLL  175 (346)
T ss_dssp             GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHH
T ss_pred             HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchH
Confidence            99999876 5555665 678899999999999999999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.1e-38  Score=273.31  Aligned_cols=177  Identities=29%  Similarity=0.478  Sum_probs=154.5

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC--CCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--PAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~--~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      .+|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++  ...+|.++|||++|+|+++|++ ++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            4699999999975699999999999999999999999999999999998765  3468999999999999999999 999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEec-cccEEEcC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVVKVD  171 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~p  171 (217)
                      ++||+|+..+..+|+.|.+|++|++++|++...   .|...+|                   +|+||++++ ++.++++ 
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~i-  137 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQTTNG-------------------GFSEYMLVKSSRWLVKL-  137 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEESCGGGEEEE-
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccccCC-------------------cceeeEEecCcccEEEe-
Confidence            999999888888999999999999999987653   3433444                   999999999 9999999 


Q ss_pred             CCCCccccccccchhhhHHHHHHHh----cCCCCCCEEEEEcCChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRT----ANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~----~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++++||.+++++.|||+++.+.    .++ +|++|||+|+|++|++
T Consensus       138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~  185 (344)
T 2h6e_A          138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVY  185 (344)
T ss_dssp             SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHH
T ss_pred             CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHH
Confidence            9999999999999999999976554    288 9999999999999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=5.5e-39  Score=275.07  Aligned_cols=178  Identities=28%  Similarity=0.450  Sum_probs=161.6

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++  +++++++.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            789999998875  899999999999999999999999999999999987643 36799999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+..+|+.|.+|++|++++|++...   .|...+|                   +|+||++++++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEHRHG-------------------TYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTSSCC-------------------SSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccc---cCcCCCc-------------------cceeEEEeChHHeEECCCC
Confidence            99999999999999999999999999988764   3443344                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++|+.+++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~  182 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVA  182 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHH
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHH
Confidence            9999999888999999997766679999999999999 999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.1e-39  Score=276.59  Aligned_cols=176  Identities=31%  Similarity=0.476  Sum_probs=158.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++   ...+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            78999999887799999999999999999999999999999999988654   246799999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+..+|+.|.+|++|++++|++...   .|...+|                   +|+||++++++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVDRDG-------------------GFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCCCCC-------------------cceeEEEEchHHeEECCCC
Confidence            99999999999999999999999999988754   3333344                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +++++|+++. +++|||+++.+.+++ +|++|||+|+|++|++
T Consensus       139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~  179 (343)
T 2dq4_A          139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLM  179 (343)
T ss_dssp             SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHH
T ss_pred             CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHH
Confidence            9999999874 788999977548889 9999999999999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6e-39  Score=274.94  Aligned_cols=181  Identities=28%  Similarity=0.437  Sum_probs=159.3

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC--CCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~--~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |||+++++++++++++++|.|+|+++||||||++++||++|++++.|.++.  ..+|.++|||++|+|+++|++|++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            799999999988999999999999999999999999999999999987542  468999999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCC-CCC-CCCCCCCCCCcccccCCCceeeeccccceeeeeEEec-cccEEEcC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAF-PFK-ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVVKVD  171 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~-~~~-~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~p  171 (217)
                      ||+|++.+..+|+.|.+|++|++++|+.. .+. ...|...+|                   +|+||++++ .+.++++|
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~~~p  141 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPG-------------------SMAEYMIVDSARHLVPIG  141 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCC-------------------SSBSEEEESCGGGEEECT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCc-------------------eeeEEEEecchhceEeCC
Confidence            99999999999999999999999999432 211 012223334                   999999999 89999999


Q ss_pred             CCCCccccccccchhhhHHHHHHH-hcCCCCCCEEEEEcCChhccCC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~-~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      + +++++||.+++++.|||+++.+ ..++++|++|||+|+|++|+++
T Consensus       142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a  187 (345)
T 3jv7_A          142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVG  187 (345)
T ss_dssp             T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHH
T ss_pred             C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            9 9999999999999999997765 4489999999999999999753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=9.9e-39  Score=273.18  Aligned_cols=177  Identities=30%  Similarity=0.401  Sum_probs=158.2

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++++++++++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            799999999855999999999999999999999999999999999887642 4679999999999999999999999999


Q ss_pred             CEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+. ..|+.|.+|+.|++++|++...   .|...+|                   +|+||++++++.++++|+++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P~~~  138 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNL  138 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcce---eecCCCC-------------------cceeeEEechHHEEECCCCC
Confidence            99998664 4599999999999999987754   3434444                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++||.+++++.|||+++. ..++++|++|||+|+|++|++
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~  179 (339)
T 1rjw_A          139 SFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGLGHV  179 (339)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECCSTTHHH
T ss_pred             CHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHH
Confidence            99999999999999999764 458999999999999889975

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.3e-38  Score=273.58  Aligned_cols=179  Identities=22%  Similarity=0.292  Sum_probs=159.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhh-hhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVT-FWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~-~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.++++ ++++++|.|+|+++||||||++++||++|++ ++.|.++. .+|.++|||++|+|+++|++|++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC-CSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC-CCCcccCCcceEEEEEECCCCCcCCCC
Confidence            79999999998 9999999999999999999999999999999 55776553 679999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc--cEEEcCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~p~~  173 (217)
                      |+|++.+..+|+.|.+|+.|+++.|.........+...+|                   +|+||++++.+  .++++|++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G-------------------~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG-------------------VFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCC-------------------SSBSCEEESSHHHHCEECCTT
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccCCCC-------------------cccceEEeccccCeEEECCCC
Confidence            9999999999999999999999999765432222333344                   99999999976  89999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++|++++.++.|||+++ +.+++++|++|||+|+|++|+++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a  182 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMS  182 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHH
T ss_pred             CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence            99999999988999999965 88999999999999999999753

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.4e-39  Score=274.51  Aligned_cols=177  Identities=31%  Similarity=0.492  Sum_probs=156.6

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhc-CCC--CCCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM-KDF--PAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g-~~~--~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ++|||+++.+++. ++++++|.|+|+++||||||++++||++|++++.+ .+.  ...+|.++|||++|+|+++|++|++
T Consensus         3 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            3 SDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             -CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            4599999999876 99999999999999999999999999999998874 332  1357899999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      |++||+|++.+..+|+.|.+|++|++++|++..+   .|.. .+|                   +|+||++++++.++++
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~~i  139 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDDG-------------------NLARYYVHAADFCHKL  139 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEEC
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCCc-------------------cceeEEEeChHHeEEC
Confidence            9999999999999999999999999999998754   2321 233                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++||++ .+++|||+++ +.+++++|++|||+|+|++|++
T Consensus       140 P~~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~  183 (352)
T 1e3j_A          140 PDNVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLV  183 (352)
T ss_dssp             CTTSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHH
T ss_pred             cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            999999999876 4888999976 7889999999999999999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8e-39  Score=275.44  Aligned_cols=177  Identities=28%  Similarity=0.429  Sum_probs=157.2

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC-C--CCCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-F--PAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~-~--~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ++|||+++.+++. +++++++.|+|+++||||||++++||++|++++.+.. .  ...+|.++|||++|+|+++|++|++
T Consensus         6 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             cCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            5599999999876 9999999999999999999999999999999887532 1  1357899999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      |++||||++.+..+|+.|.+|++|++++|++..+   .|.. .+|                   +|+||++++.+.++++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~~i  142 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-------------------NLCRFYKHNAAFCYKL  142 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEEC
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCCC-------------------ccccEEEeehHHEEEC
Confidence            9999999999999999999999999999988754   2321 234                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+++++++|+++ .+++|||+++ +.+++++|++|||+|+|++|++
T Consensus       143 P~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~  186 (356)
T 1pl8_A          143 PDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMV  186 (356)
T ss_dssp             CTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHH
T ss_pred             cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence            999999999876 4888999976 7889999999999999999975

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4.5e-38  Score=270.91  Aligned_cols=188  Identities=24%  Similarity=0.338  Sum_probs=159.5

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      .+|+|++++..++.+.++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            46789999998876669999999999999999999999999999999998876545689999999999999999999999


Q ss_pred             CCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        93 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      ++||+|++.+. .+|+.|.+|++|++++|++..... .+....|              ....|+|+||++++++.++++|
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P  150 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY-NDVYING--------------QPTQGGFAKATVVHQKFVVKIP  150 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCTTS--------------CBCCCSSBSCEEEEGGGEEECC
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccc-cccccCC--------------CCCCCccccEEEechhhEEECc
Confidence            99999987553 579999999999999997553210 1100011              0112499999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCC-CCCEEEEEcCChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-~g~~VlI~GaG~vG~~  216 (217)
                      +++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++
T Consensus       151 ~~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~  195 (357)
T 2cf5_A          151 EGMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHM  195 (357)
T ss_dssp             SSCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHH
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHH
Confidence            9999999999999999999965 567888 9999999999999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-38  Score=272.57  Aligned_cols=184  Identities=22%  Similarity=0.348  Sum_probs=158.0

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      ..++||++++.++++.++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            55779999998876669999999999999999999999999999999999876555689999999999999999999999


Q ss_pred             CCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCC--C---CCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI--S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        93 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~--~---~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      ++||+|++.+. ..|+.|.+|++|++++|++.....  .   .|...+                   |+|+||++++.+.
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~-------------------G~~aeyv~v~~~~  159 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL-------------------GGYSQQIVVHERY  159 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCC-------------------CSSBSEEEEEGGG
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCC-------------------CcccceEEEcchh
Confidence            99999998765 569999999999999998763110  0   022223                   3999999999999


Q ss_pred             EEEcCCC-CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          167 VVKVDPT-VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       167 ~~~~p~~-~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++|++ +++++||.+++++.|||+++. ..++++|++|||+|+|++|++
T Consensus       160 ~~~~P~~~ls~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlV~GaG~vG~~  209 (369)
T 1uuf_A          160 VLRIRHPQEQLAAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGIGGLGHM  209 (369)
T ss_dssp             CEECCSCGGGHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHH
T ss_pred             EEECCCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHH
Confidence            9999999 999999999999999999764 469999999999999999975

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=4.9e-38  Score=269.59  Aligned_cols=176  Identities=27%  Similarity=0.446  Sum_probs=158.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC--------CCCCCeeeeecceEEEEEeCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------PAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~--------~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      |||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            79999999886699999999999999999999999999999999888654        2468999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc-ccE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHV  167 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~  167 (217)
                      |++|++||+|+..+..+|+.|.+|+.|++++|++...   .|...+|                   +|+||+++++ +.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCCC-------------------cceeEEEecCccce
Confidence            9999999999888888999999999999999987653   3433444                   9999999999 999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCC-hhccC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLG-SIGLA  216 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG-~vG~~  216 (217)
                      +++ +++++++|+.+++++.|||+++ +.+++++|++|||+|+| ++|++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~  186 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTM  186 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHH
Confidence            999 9999999999999999999976 56899999999999994 99975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.5e-38  Score=271.35  Aligned_cols=186  Identities=27%  Similarity=0.335  Sum_probs=159.0

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC---
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD---   90 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~---   90 (217)
                      ..+|||+++.++++.++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++| +|+   
T Consensus        15 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           15 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             hhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence            3579999999998449999999999999999999999999999999999876545689999999999999999 999   


Q ss_pred             ---CCCCCCEEeeecccCCCCCcccc-CCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEe-ccc
Q 027867           91 ---GVVEGDVVIPHFLADCTECVGCR-SKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL-DIA  165 (217)
Q Consensus        91 ---~~~vGd~V~~~~~~~c~~c~~c~-~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~  165 (217)
                         +|++||+|++.+..+|+.|.+|+ +|++++|++...   .|.....        +   ......|+|+||+++ +++
T Consensus        94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~--------~---~~~~~~G~~aey~~v~~~~  159 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC--------S---EYPHLRGCYSSHIVLDPET  159 (380)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS--------S---STTCCCSSSBSEEEECTTC
T ss_pred             cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---ecccccc--------C---CCCCCCccccceEEEcccc
Confidence               99999999999999999999999 999999987653   2220000        0   000011499999999 999


Q ss_pred             cEEEcCCCCCcc-ccccccchhhhHHHHHHHhcC-CCCCCEEEEEcCChhccC
Q 027867          166 HVVKVDPTVPPN-RACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       166 ~~~~~p~~~~~~-~aa~l~~~~~ta~~a~~~~~~-~~~g~~VlI~GaG~vG~~  216 (217)
                      .++++|++++++ +|+++. +++|||+++ +.++ +++|++|||+|+|++|++
T Consensus       160 ~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~  210 (380)
T 1vj0_A          160 DVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLF  210 (380)
T ss_dssp             CEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHH
T ss_pred             eEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHH
Confidence            999999999999 777776 999999976 6788 999999999999999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=3.8e-37  Score=266.04  Aligned_cols=188  Identities=22%  Similarity=0.364  Sum_probs=157.3

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      .+|++++++..+..+.++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            45667777776655559999999999999999999999999999999998876555689999999999999999999999


Q ss_pred             CCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        93 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      ++||+|++.+. .+|+.|.+|++|++++|++..... .+....|              ....|+|+||++++.+.++++|
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P  157 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTY-ASIYHDG--------------TITYGGYSNHMVANERYIIRFP  157 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESS-SSBCTTS--------------CBCCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccc-cccccCC--------------CcCCCccccEEEEchhhEEECC
Confidence            99999987554 589999999999999996653210 1110011              0012499999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCC-CCCEEEEEcCChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-~g~~VlI~GaG~vG~~  216 (217)
                      +++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++
T Consensus       158 ~~ls~~~aa~l~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~  202 (366)
T 1yqd_A          158 DNMPLDGGAPLLCAGITVYSPL-KYFGLDEPGKHIGIVGLGGLGHV  202 (366)
T ss_dssp             TTSCTTTTGGGGTHHHHHHHHH-HHTTCCCTTCEEEEECCSHHHHH
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCcCCCCCEEEEECCCHHHHH
Confidence            9999999999999999999965 556788 9999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=6.4e-37  Score=264.28  Aligned_cols=181  Identities=23%  Similarity=0.210  Sum_probs=155.5

Q ss_pred             CCCCceeeeEEeccCC-CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCC
Q 027867           11 AGKPIQCRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      +.+|.+|||+++.+++ +.++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus        22 ~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~  101 (363)
T 3uog_A           22 SMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKS  101 (363)
T ss_dssp             -CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTT
T ss_pred             ccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCC
Confidence            3467889999999764 23999999999999999999999999999999999987653 578999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS-PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      |++|++||+|++.+..      .|..|. +.|.+...... .|...+|                   +|+||++++++.+
T Consensus       102 v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~  155 (363)
T 3uog_A          102 VTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPG-------------------VLSEYVVLPEGWF  155 (363)
T ss_dssp             CCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCC-------------------CCBSEEEEEGGGE
T ss_pred             CCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCC-------------------cceeEEEechHHe
Confidence            9999999999987543      567788 88874322111 3334444                   9999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|+++
T Consensus       156 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a  205 (363)
T 3uog_A          156 VAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFG  205 (363)
T ss_dssp             EECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHH
T ss_pred             EECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence            99999999999999999999999987788999999999999999999753

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.4e-37  Score=266.43  Aligned_cols=176  Identities=24%  Similarity=0.345  Sum_probs=156.9

Q ss_pred             eeeEEeccCC-CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++...+ ..++++|+|+|+|+++||||||+|+|||++|++++.|.++. ++|.++|||++|+|+++|++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeecccC
Confidence            8999986543 34999999999999999999999999999999999998764 789999999999999999999999999


Q ss_pred             CEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|.+.+. ..|+.|.+|..+..+.|.....   .+...+|                   +|+||++++.+.++++|+++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~G-------------------~~ae~~~~~~~~~~~iP~~~  137 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKN---AGYSVDG-------------------GMAEEAIVVADYAVKVPDGL  137 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGSCBCCTTS
T ss_pred             CeEeecccccccCccccccCCcccccccccc---cccccCC-------------------cceeeccccccceeecCCCC
Confidence            99988775 4578999999999999988765   4444555                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++++|+++++++.|+|++ ++.+++++|++|||+|+|++|++
T Consensus       138 ~~~~aa~l~~~~~ta~~~-l~~~~~~~g~~VlV~GaG~~g~~  178 (348)
T 4eez_A          138 DPIEASSITCAGVTTYKA-IKVSGVKPGDWQVIFGAGGLGNL  178 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHH-HHHHTCCTTCEEEEECCSHHHHH
T ss_pred             CHHHHhhcccceeeEEee-ecccCCCCCCEEEEEcCCCccHH
Confidence            999999999999999995 47788999999999999888754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.3e-37  Score=268.04  Aligned_cols=176  Identities=20%  Similarity=0.185  Sum_probs=153.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCC---CeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~---p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            799999998877999999999999999999999999999999999987654456   8999999999 9999999 9999


Q ss_pred             CCCEEeeecccC--CCCCccccCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           94 EGDVVIPHFLAD--CTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        94 vGd~V~~~~~~~--c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      +||+|++.+..+  |+.|.+|++|++++|++..... .|. ..+                   |+|+||++++++.++++
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~-------------------G~~aey~~v~~~~~~~i  138 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAH-------------------GYMSEFFTSPEKYLVRI  138 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEEC-------------------CSCBSEEEEEGGGEEEC
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCC-------------------cceeeEEEEchHHeEEC
Confidence            999999988777  9999999999999999865410 022 223                   39999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCC------CEEEEEcCChhccCC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVG------STVVIFGLGSIGLAV  217 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g------~~VlI~GaG~vG~~a  217 (217)
                      |++++ +.|+ ++.+++|||+++ +.+++++|      ++|||+|+|++|+++
T Consensus       139 P~~~~-~~aa-l~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a  188 (357)
T 2b5w_A          139 PRSQA-ELGF-LIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLT  188 (357)
T ss_dssp             CGGGS-TTGG-GHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHH
T ss_pred             CCCcc-hhhh-hhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHH
Confidence            99999 6554 667999999976 77889999      999999999999753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.8e-37  Score=269.49  Aligned_cols=182  Identities=23%  Similarity=0.349  Sum_probs=156.8

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCC-CC-----CeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPP-NS-----HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~-~~-----~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      +|||+++.+++. ++++++|.|+| ++     +||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            489999999876 99999999998 68     9999999999999999999998753 3678999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCC-----CCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-----ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-----~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  164 (217)
                      ++|++||+|++.+..+|+.|.+|++|++++|++....     ...|....                ...|+|+||++++.
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~----------------~~~G~~aey~~v~~  143 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK----------------GWSGGQAEYVLVPY  143 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBS----------------SCCCSSBSEEEESS
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccC----------------CCCceeeeeEEecc
Confidence            9999999999999999999999999999999872110     01121000                01249999999998


Q ss_pred             c--cEEEcCCCCCccc----cccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          165 A--HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       165 ~--~~~~~p~~~~~~~----aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      +  .++++|+++++++    |+++++++.|||+++ +.+++++|++|||+|+|++|++
T Consensus       144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~  200 (398)
T 2dph_A          144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRC  200 (398)
T ss_dssp             HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHH
T ss_pred             ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHH
Confidence            7  8999999999998    888888999999976 7899999999999999999975

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-37  Score=267.57  Aligned_cols=184  Identities=24%  Similarity=0.333  Sum_probs=156.9

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCC-CCe------EEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPN-SHE------VRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~-~~e------VlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      +|||+++.+++. ++++++|.|+|+ ++|      |||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            489999998876 999999999997 898      99999999999999999988653 357899999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~---~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  165 (217)
                      |++|++||+|++.+..+|+.|.+|++|++++|++.....   ..|....               ....|+|+||++++.+
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------------~~~~G~~aey~~v~~~  144 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDM---------------GDWTGGQAEYVLVPYA  144 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTS---------------CCBCCCSBSEEEESSH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccC---------------CCCCceeeeEEEecch
Confidence            999999999999888899999999999999998764210   0111000               0012499999999986


Q ss_pred             --cEEEcCCCCCccc----cccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          166 --HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       166 --~~~~~p~~~~~~~----aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                        .++++|+++++++    ++.+++++.|||+++ +.+++++|++|||+|+|++|+++
T Consensus       145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a  201 (398)
T 1kol_A          145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAA  201 (398)
T ss_dssp             HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHH
T ss_pred             hCeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHH
Confidence              8999999999887    678888999999976 57899999999999999999753

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=6.1e-37  Score=267.93  Aligned_cols=183  Identities=24%  Similarity=0.287  Sum_probs=157.4

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCC-CCCCeEEEEEeEeeCChhhhhhhhcCC------C-CCCCCeeeeecceEEEE
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVE   83 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~a~~i~~~D~~~~~g~~------~-~~~~p~ilG~e~~G~Vv   83 (217)
                      ..|.+|+++++...+. ++++++|.|+ |+++||||||++++||++|++++.+..      + ...+|.++|||++|+|+
T Consensus        26 ~~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           26 EGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             TTTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            3455667766666665 8999999999 999999999999999999999987642      1 13689999999999999


Q ss_pred             EeCCCC------CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceee
Q 027867           84 SVGENV------DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (217)
Q Consensus        84 ~vG~~v------~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  157 (217)
                      ++|++|      ++|++||+|++.+..+|+.|.+|++|++++|++...   .|...+|                   +|+
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~a  162 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVDG-------------------AFA  162 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSB
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCCC-------------------CCc
Confidence            999999      889999999999999999999999999999998764   4544555                   999


Q ss_pred             eeEEeccccEEEcCCCCCc------cccccccchhhhHHHHHHHh-cCCCCCCEEEEEcCChhccCC
Q 027867          158 EYTVLDIAHVVKVDPTVPP------NRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       158 ~~~~v~~~~~~~~p~~~~~------~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ||++++.+.++++|+.+++      .++|.+..+++|||+++... +++++|++|||+|+|++|+++
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~a  229 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAA  229 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHH
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHH
Confidence            9999999999999998863      45778888999999977655 489999999999999999753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.5e-36  Score=259.16  Aligned_cols=175  Identities=23%  Similarity=0.346  Sum_probs=148.2

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCC-CeEEEEEeEeeCChhhhhhhhc--CCCCCCC---CeeeeecceEEEEEeCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKM--KDFPAVF---PRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~-~eVlV~v~a~~i~~~D~~~~~g--~~~~~~~---p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      |||+++.+++++++++++|.|+|++ +||||||++++||++|++++.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999988669999999999999 9999999999999999999988  5543356   89999999999999  77 8


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      +|++||+|++.+..+|+.|.+|++|++++|++.... ..|.. .+                   |+|+||++++++.+++
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~g~~~~~-------------------G~~aey~~v~~~~~~~  137 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG-EAGIHKMD-------------------GFMREWWYDDPKYLVK  137 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCE-EETTBEEC-------------------CSCBSEEEECGGGEEE
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcc-cCCccCCC-------------------CceeEEEEechHHeEE
Confidence            999999999999999999999999999999876431 00222 23                   3999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHH--H--hcCCC--C-------CCEEEEEcCChhccC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAW--R--TANVE--V-------GSTVVIFGLGSIGLA  216 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~--~--~~~~~--~-------g~~VlI~GaG~vG~~  216 (217)
                      +|++++ ++|+ +..++.|||+++.  +  .++++  +       |++|||+|+|++|++
T Consensus       138 iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~  195 (366)
T 2cdc_A          138 IPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVL  195 (366)
T ss_dssp             ECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHH
T ss_pred             CcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHH
Confidence            999999 8876 5569999999776  4  78888  8       999999999999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.1e-35  Score=261.15  Aligned_cols=185  Identities=21%  Similarity=0.171  Sum_probs=155.9

Q ss_pred             CCCCceeeeEEeccCC-------------CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhh---------------
Q 027867           11 AGKPIQCRAAIATAPG-------------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---------------   62 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~-------------~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~---------------   62 (217)
                      ..+|.+|||+++.+++             +.++++++|.|+|+++||||||++++||++|++...               
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~   98 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR   98 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence            4689999999999987             239999999999999999999999999999985422               


Q ss_pred             -cCCCC-CCCC-eeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccc
Q 027867           63 -MKDFP-AVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRF  139 (217)
Q Consensus        63 -g~~~~-~~~p-~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~  139 (217)
                       +.+.. ..+| .++|||++|+|+++|++|++|++||+|++.+...|+.|. |..+..+.|++...   .|...+     
T Consensus        99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~-----  169 (447)
T 4a0s_A           99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETN-----  169 (447)
T ss_dssp             TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSS-----
T ss_pred             cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCC-----
Confidence             11111 2456 699999999999999999999999999998888888776 44577899988765   344332     


Q ss_pred             ccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHH--hcCCCCCCEEEEEcC-ChhccC
Q 027867          140 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       140 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                                   .|+|+||++++.+.++++|+++++++||++++++.|||+++.+  .+++++|++|||+|+ |++|++
T Consensus       170 -------------~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~  236 (447)
T 4a0s_A          170 -------------FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSY  236 (447)
T ss_dssp             -------------SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHH
T ss_pred             -------------CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHH
Confidence                         1399999999999999999999999999999899999997764  488999999999998 999975


Q ss_pred             C
Q 027867          217 V  217 (217)
Q Consensus       217 a  217 (217)
                      +
T Consensus       237 a  237 (447)
T 4a0s_A          237 A  237 (447)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=4.8e-35  Score=247.76  Aligned_cols=155  Identities=22%  Similarity=0.288  Sum_probs=140.3

Q ss_pred             ceeeeEEecc-CCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           15 IQCRAAIATA-PGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        15 ~~~~a~~~~~-~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      ++|||+++.+ ++. ++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|+
T Consensus         3 ~tMka~~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            3 EQHQVWAYQTKTHS-VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             CEEEEEEEETTTTE-EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             cceEEEEEeCCCCe-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            4699999995 544 99999999999999999999999999999999999877668899999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+..+.                           ...+|                   +|+||++++++.++++|++
T Consensus        82 vGdrV~~~~~---------------------------~~~~G-------------------~~aey~~v~~~~~~~iP~~  115 (315)
T 3goh_A           82 LGRRVAYHTS---------------------------LKRHG-------------------SFAEFTVLNTDRVMTLPDN  115 (315)
T ss_dssp             TTCEEEEECC---------------------------TTSCC-------------------SSBSEEEEETTSEEECCTT
T ss_pred             CCCEEEEeCC---------------------------CCCCc-------------------ccccEEEEcHHHhccCcCC
Confidence            9999987531                           12233                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      +++++||.++++++|||+++ +.+++++|++|||+|+|++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a  158 (315)
T 3goh_A          116 LSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLL  158 (315)
T ss_dssp             SCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHH
T ss_pred             CCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHH
Confidence            99999999999999999977 88999999999999999999753

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2e-34  Score=246.84  Aligned_cols=161  Identities=22%  Similarity=0.238  Sum_probs=140.7

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC--CCCCeeeeecceEEEEEeCCCC
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~--~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      ..|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|..+.  ..+|.++|||++|+|+++|++|
T Consensus         3 ~~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v   82 (343)
T 3gaz_A            3 LTTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEV   82 (343)
T ss_dssp             ---CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCC
Confidence            35788999999999888999999999999999999999999999999999886432  4689999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++|++||+|+....           +.              ...+                   |+|+||++++.+.+++
T Consensus        83 ~~~~vGdrV~~~~~-----------g~--------------~~~~-------------------G~~aey~~v~~~~~~~  118 (343)
T 3gaz_A           83 DSFRVGDAVFGLTG-----------GV--------------GGLQ-------------------GTHAQFAAVDARLLAS  118 (343)
T ss_dssp             CSCCTTCEEEEECC-----------SS--------------TTCC-------------------CSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEEeC-----------CC--------------CCCC-------------------cceeeEEEecHHHeee
Confidence            99999999986321           00              0022                   3999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       119 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~  166 (343)
T 3gaz_A          119 KPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHV  166 (343)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHH
T ss_pred             CCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHH
Confidence            99999999999999999999998778999999999999996 999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.7e-34  Score=245.75  Aligned_cols=168  Identities=21%  Similarity=0.326  Sum_probs=147.4

Q ss_pred             CCCCCCCCCCCCCceeeeEEeccCCCC---eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeec
Q 027867            2 DIEKPSNKTAGKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHE   77 (217)
Q Consensus         2 ~~~~~~~~~~~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e   77 (217)
                      |..+|--.+.++|.+|||+++.+++++   ++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||
T Consensus        12 ~~~~~~~~~~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E   91 (357)
T 1zsy_A           12 DLGTENLYFQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNE   91 (357)
T ss_dssp             CTTCSCCCCCCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSC
T ss_pred             CcchhhhhhhhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccce
Confidence            344454455578889999999999875   889999999999999999999999999999999987654 3579999999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceee
Q 027867           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (217)
Q Consensus        78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  157 (217)
                      ++|+|+++|++|++|++||+|++.+.                             .+                   |+|+
T Consensus        92 ~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-------------------G~~a  123 (357)
T 1zsy_A           92 GVAQVVAVGSNVTGLKPGDWVIPANA-----------------------------GL-------------------GTWR  123 (357)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESSS-----------------------------CS-------------------CCSB
T ss_pred             EEEEEEEeCCCCCCCCCCCEEEEcCC-----------------------------CC-------------------ccce
Confidence            99999999999999999999986421                             01                   3999


Q ss_pred             eeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       158 ~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ||++++++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|+++
T Consensus       124 ey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a  184 (357)
T 1zsy_A          124 TEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAV  184 (357)
T ss_dssp             SEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHH
T ss_pred             eEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHH
Confidence            99999999999999999999999999889999998878889999999999998 9999753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1e-34  Score=257.51  Aligned_cols=185  Identities=18%  Similarity=0.195  Sum_probs=156.5

Q ss_pred             CCCCceeeeEEeccCC---------------CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcC-----------
Q 027867           11 AGKPIQCRAAIATAPG---------------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-----------   64 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~---------------~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~-----------   64 (217)
                      .++|.+|||+++.+++               ++++++++|.|+|+++||||||++++||++|++...+.           
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            3588999999999862               23899999999999999999999999999998764321           


Q ss_pred             --CC----CCCCC-eeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCc
Q 027867           65 --DF----PAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS  137 (217)
Q Consensus        65 --~~----~~~~p-~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~  137 (217)
                        ..    ...+| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..+..+.|++...   .|....   
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~---  177 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETN---  177 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSS---
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCC---
Confidence              10    12467 69999999999999999999999999998543 588899999999999988765   344332   


Q ss_pred             ccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHh--cCCCCCCEEEEEcC-Chhc
Q 027867          138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIG  214 (217)
Q Consensus       138 ~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~--~~~~~g~~VlI~Ga-G~vG  214 (217)
                                     .|+|+||++++.++++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|
T Consensus       178 ---------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG  242 (456)
T 3krt_A          178 ---------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLG  242 (456)
T ss_dssp             ---------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred             ---------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHH
Confidence                           13999999999999999999999999999998999999977654  78999999999998 9999


Q ss_pred             cCC
Q 027867          215 LAV  217 (217)
Q Consensus       215 ~~a  217 (217)
                      +++
T Consensus       243 ~~a  245 (456)
T 3krt_A          243 SYA  245 (456)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=7.9e-34  Score=240.99  Aligned_cols=158  Identities=20%  Similarity=0.205  Sum_probs=138.9

Q ss_pred             CceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC-----CCCCCCeeeeecceEEEEEeC
Q 027867           14 PIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-----FPAVFPRILGHEAIGVVESVG   86 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~-----~~~~~p~ilG~e~~G~Vv~vG   86 (217)
                      +++|||+++.+++++  ++++++|.|+|+++||||||++++||++|++++.|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            357999999998876  9999999999999999999999999999999998831     234689999999999999999


Q ss_pred             CCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        87 ~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      ++|++|++||+|+..+..+                          ..+                   |+|+||++++++.
T Consensus        84 ~~v~~~~~GdrV~~~~~~~--------------------------~~~-------------------G~~aey~~v~~~~  118 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFP--------------------------DHP-------------------CCYAEYVCASPDT  118 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTT--------------------------TCC-------------------CCSBSEEEECGGG
T ss_pred             CCCCCCCCCCEEEEccCCC--------------------------CCC-------------------CcceEEEEecHHH
Confidence            9999999999998753210                          112                   3999999999999


Q ss_pred             EEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       167 ~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ++++|+++++++||++++++.|||+++ +.+++++|++|||+|+ |++|+++
T Consensus       119 ~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a  169 (321)
T 3tqh_A          119 IIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLA  169 (321)
T ss_dssp             EEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHH
T ss_pred             hccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHH
Confidence            999999999999999999999999977 8899999999999985 9999753

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=8.9e-34  Score=241.79  Aligned_cols=155  Identities=22%  Similarity=0.238  Sum_probs=140.0

Q ss_pred             CCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      .++|.+|||+++.+++++  +++++++.|+|+++||||||++++||++|++++.|.++. .+|.++|||++|+|+++|++
T Consensus         3 ~~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~P~i~G~e~~G~V~~vG~~   81 (334)
T 3qwb_A            3 CTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC-EKPYVLGREASGTVVAKGKG   81 (334)
T ss_dssp             --CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC-CSSEECCSEEEEEEEEECTT
T ss_pred             CCCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCccccceEEEEEEECCC
Confidence            357899999999998875  899999999999999999999999999999999988764 68999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEec-cccE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHV  167 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~  167 (217)
                      |++|++||+|++..                               +                   |+|+||++++ .+.+
T Consensus        82 v~~~~~GdrV~~~~-------------------------------~-------------------G~~aey~~v~~~~~~  111 (334)
T 3qwb_A           82 VTNFEVGDQVAYIS-------------------------------N-------------------STFAQYSKISSQGPV  111 (334)
T ss_dssp             CCSCCTTCEEEEEC-------------------------------S-------------------SCSBSEEEEETTSSE
T ss_pred             CCCCCCCCEEEEee-------------------------------C-------------------CcceEEEEecCcceE
Confidence            99999999997531                               1                   3999999999 9999


Q ss_pred             EEcCCCCCccc---cccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          168 VKVDPTVPPNR---ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       168 ~~~p~~~~~~~---aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++|+++++++   |+.+++...|||+++.+..++++|++|||+|+ |++|++
T Consensus       112 ~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~  164 (334)
T 3qwb_A          112 MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLI  164 (334)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHH
T ss_pred             EECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHH
Confidence            99999999999   88888899999998877789999999999996 999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=5.3e-34  Score=244.21  Aligned_cols=157  Identities=24%  Similarity=0.278  Sum_probs=141.4

Q ss_pred             CCCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeC
Q 027867           10 TAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG   86 (217)
Q Consensus        10 ~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG   86 (217)
                      ++++|.+|||+++.+++.+  ++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        15 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG   94 (342)
T 4eye_A           15 QTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAP   94 (342)
T ss_dssp             ---CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECC
T ss_pred             cccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEEC
Confidence            4568999999999987766  999999999999999999999999999999999987643 4789999999999999999


Q ss_pred             CCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        87 ~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      ++++ |++||+|+...                              .+                   |+|+||++++.+.
T Consensus        95 ~~v~-~~vGDrV~~~~------------------------------~~-------------------G~~aey~~v~~~~  124 (342)
T 4eye_A           95 EGSG-IKPGDRVMAFN------------------------------FI-------------------GGYAERVAVAPSN  124 (342)
T ss_dssp             TTSS-CCTTCEEEEEC------------------------------SS-------------------CCSBSEEEECGGG
T ss_pred             CCCC-CCCCCEEEEec------------------------------CC-------------------CcceEEEEEcHHH
Confidence            9999 99999998642                              12                   3999999999999


Q ss_pred             EEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       167 ~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++|+++++++||.+++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       125 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~  175 (342)
T 4eye_A          125 ILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTA  175 (342)
T ss_dssp             EEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             eEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH
Confidence            99999999999999999999999998878999999999999998 999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=7.8e-34  Score=242.81  Aligned_cols=154  Identities=21%  Similarity=0.278  Sum_probs=140.8

Q ss_pred             CceeeeEEeccCCCC---eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCC
Q 027867           14 PIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      +++|||+++.+++++   ++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v   81 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFV   81 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTS
T ss_pred             CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCC
Confidence            367999999999987   899999999999999999999999999999999988654 5789999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++|++||+|+...                              .+                   |+|+||++++.+.+++
T Consensus        82 ~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~~~  112 (340)
T 3gms_A           82 SRELIGKRVLPLR------------------------------GE-------------------GTWQEYVKTSADFVVP  112 (340)
T ss_dssp             CGGGTTCEEEECS------------------------------SS-------------------CSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEecC------------------------------CC-------------------ccceeEEEcCHHHeEE
Confidence            9999999997421                              12                   3999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +|+++++++||++++...|||.++.+.+++++|++|||+|+ |++|++
T Consensus       113 vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~  160 (340)
T 3gms_A          113 IPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHL  160 (340)
T ss_dssp             CCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             CCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHH
Confidence            99999999999999999999998889999999999999998 599975

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5.7e-34  Score=244.94  Aligned_cols=158  Identities=23%  Similarity=0.274  Sum_probs=142.2

Q ss_pred             CCCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeC
Q 027867           10 TAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG   86 (217)
Q Consensus        10 ~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG   86 (217)
                      ..++|.+|||+++.+++.+  ++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        22 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG  101 (353)
T 4dup_A           22 SMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVG  101 (353)
T ss_dssp             -CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEEC
T ss_pred             cCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEEC
Confidence            3458889999999998765  999999999999999999999999999999999988754 3578999999999999999


Q ss_pred             CCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        87 ~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      ++|++|++||+|+...                              .+                   |+|+||++++++.
T Consensus       102 ~~v~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~  132 (353)
T 4dup_A          102 PGVSGYAVGDKVCGLA------------------------------NG-------------------GAYAEYCLLPAGQ  132 (353)
T ss_dssp             TTCCSCCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGG
T ss_pred             CCCCCCCCCCEEEEec------------------------------CC-------------------CceeeEEEEcHHH
Confidence            9999999999997532                              12                   3999999999999


Q ss_pred             EEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       167 ~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++|+++++++||.++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       133 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~  183 (353)
T 4dup_A          133 ILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTT  183 (353)
T ss_dssp             EEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHH
T ss_pred             cEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHH
Confidence            99999999999999999999999998878899999999999966 999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.6e-33  Score=243.10  Aligned_cols=159  Identities=21%  Similarity=0.211  Sum_probs=139.4

Q ss_pred             CCceeeeEEeccC---CCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCC
Q 027867           13 KPIQCRAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        13 ~~~~~~a~~~~~~---~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      .+++|||+++.++   +.+  ++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred             hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence            4567999999876   222  89999999999999999999999999999999999876667899999999999999999


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      +|++|++||+|+...                           +...+                   |+|+||++++.+.+
T Consensus        99 ~v~~~~vGdrV~~~~---------------------------~~~~~-------------------G~~aey~~v~~~~~  132 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAG---------------------------SIIRP-------------------GTNAEFHLVDERIV  132 (363)
T ss_dssp             TCCSCCTTCEEEECC---------------------------CTTSC-------------------CSCBSEEEEEGGGC
T ss_pred             CCCCCCCCCEEEEcc---------------------------CCCCC-------------------ccceEEEEeCHHHe
Confidence            999999999998532                           11123                   39999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCC-----CCCEEEEEcC-ChhccCC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE-----VGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-----~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++|+++++++||++++++.|||+++.+..+++     +|++|||+|+ |++|+++
T Consensus       133 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a  188 (363)
T 4dvj_A          133 GRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIA  188 (363)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHH
T ss_pred             eECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHH
Confidence            999999999999999999999999888888988     8999999995 9999753

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-33  Score=241.91  Aligned_cols=153  Identities=22%  Similarity=0.324  Sum_probs=140.1

Q ss_pred             ceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |+|||+++++++++  +++++++.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            56999999998854  999999999999999999999999999999999998643 578999999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|+...                              .+                   |+|+||++++.+.++++|
T Consensus        82 ~~~GdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~~~iP  112 (349)
T 4a27_A           82 YEIGDRVMAFV------------------------------NY-------------------NAWAEVVCTPVEFVYKIP  112 (349)
T ss_dssp             CCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEec------------------------------CC-------------------CcceEEEEecHHHeEECC
Confidence            99999997542                              11                   399999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~  158 (349)
T 4a27_A          113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQA  158 (349)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence            999999999999999999998888899999999999998 999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=3e-33  Score=242.03  Aligned_cols=160  Identities=22%  Similarity=0.189  Sum_probs=136.2

Q ss_pred             CCceeeeEEeccCCCCeEEE-EeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVID-EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~-~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      +|.+|||+++.++++ ++++ ++|.|+|+++||||||++++||++|++++.+.   ..+|.++|||++|+|+++|++|++
T Consensus         8 ~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~   83 (371)
T 3gqv_A            8 PPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTH   83 (371)
T ss_dssp             CCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCS
T ss_pred             CchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCC
Confidence            678899999999987 9998 99999999999999999999999999988763   246899999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|+..       |..|..+.               ..+|                   +|+||++++.+.++++|
T Consensus        84 ~~~GdrV~~~-------~~~~~~~~---------------~~~G-------------------~~aey~~v~~~~~~~~P  122 (371)
T 3gqv_A           84 IQVGDRVYGA-------QNEMCPRT---------------PDQG-------------------AFSQYTVTRGRVWAKIP  122 (371)
T ss_dssp             CCTTCEEEEE-------CCTTCTTC---------------TTCC-------------------SSBSEEECCTTCEEECC
T ss_pred             CCCCCEEEEe-------ccCCCCCC---------------CCCC-------------------cCcCeEEEchhheEECC
Confidence            9999999643       44454321               2233                   99999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHh-cCC-----------CCCCEEEEEcC-ChhccCC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRT-ANV-----------EVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~-~~~-----------~~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++++++|+++++++.|||+++.+. .++           ++|++|||+|+ |++|+++
T Consensus       123 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a  181 (371)
T 3gqv_A          123 KGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVT  181 (371)
T ss_dssp             TTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHH
T ss_pred             CCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHH
Confidence            9999999999999999999988777 553           89999999999 8999753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.1e-33  Score=238.49  Aligned_cols=159  Identities=23%  Similarity=0.333  Sum_probs=138.4

Q ss_pred             CCCCCceeeeEEeccCCCC--eEE-EEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEe
Q 027867           10 TAGKPIQCRAAIATAPGEP--LVI-DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESV   85 (217)
Q Consensus        10 ~~~~~~~~~a~~~~~~~~~--l~~-~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~v   85 (217)
                      +++.|.+|||+++.+++.+  +++ +++|.|+|+++||||||.+++||++|++++.|.++. ..+|.++|||++|+|+++
T Consensus        23 m~~~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           23 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEE
T ss_pred             hccCcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEE
Confidence            3445678999999987754  888 899999999999999999999999999999887642 467999999999999999


Q ss_pred             CCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc
Q 027867           86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (217)
Q Consensus        86 G~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  165 (217)
                      |++|++|++||+|++...                             .+                   |+|+||++++++
T Consensus       103 G~~v~~~~vGdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~  134 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSST-----------------------------IS-------------------GGYAEYALAADH  134 (351)
T ss_dssp             CTTCTTCCTTCEEEESCC-----------------------------SS-------------------CSSBSEEEEEGG
T ss_pred             CCCCCCCCCCCEEEEeCC-----------------------------CC-------------------CcceeEEEECHH
Confidence            999999999999976321                             12                   399999999999


Q ss_pred             cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       166 ~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      .++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       135 ~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~  186 (351)
T 1yb5_A          135 TVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA  186 (351)
T ss_dssp             GEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHH
T ss_pred             HeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHH
Confidence            999999999999999999999999998777899999999999998 999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.7e-33  Score=236.57  Aligned_cols=152  Identities=26%  Similarity=0.250  Sum_probs=139.5

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |||+++++++++  +++++++.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998876  899999999999999999999999999999999998776678999999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|+....                             .+                   |+|+||++++.+.++++|+++
T Consensus        82 GdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~  113 (325)
T 3jyn_A           82 GDRVAYGTG-----------------------------PL-------------------GAYSEVHVLPEANLVKLADSV  113 (325)
T ss_dssp             TCEEEESSS-----------------------------SS-------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEecC-----------------------------CC-------------------ccccceEEecHHHeEECCCCC
Confidence            999975321                             12                   399999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++|+.+++...|+|.++.+.+++++|++|||+|+ |++|++
T Consensus       114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~  156 (325)
T 3jyn_A          114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSL  156 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence            999999988899999998888899999999999996 999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=8.4e-33  Score=236.99  Aligned_cols=155  Identities=26%  Similarity=0.316  Sum_probs=136.9

Q ss_pred             ceeeeEEeccCC-----CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           15 IQCRAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        15 ~~~~a~~~~~~~-----~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      |+|||+++.+++     +.++++++|.|+|+++||||||++++||++|++++.+.  ...+|.++|||++|+|+++|++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            469999999876     23999999999999999999999999999999998887  34689999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++|++||+|+....                           ...+                   |+|+||++++.+.+++
T Consensus        79 ~~~~~GdrV~~~~~---------------------------~~~~-------------------G~~aey~~v~~~~~~~  112 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS---------------------------PDQN-------------------GSNAEYQLINERLVAK  112 (346)
T ss_dssp             CSCCTTCEEEECCC---------------------------TTSC-------------------CSSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCC---------------------------CCCC-------------------cceeEEEEEChHHeEE
Confidence            99999999985311                           1122                   3999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCC------CCCEEEEEcC-ChhccCC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVE------VGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~------~g~~VlI~Ga-G~vG~~a  217 (217)
                      +|+++++++||++++++.|||+++.+.++++      +|++|||+|+ |++|+++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a  167 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIA  167 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHH
Confidence            9999999999999999999999888889998      9999999965 9999753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=5.8e-33  Score=238.74  Aligned_cols=157  Identities=21%  Similarity=0.239  Sum_probs=137.6

Q ss_pred             CCCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCC
Q 027867           11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      ..+|++|||+++.+++.+  +++++++.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+
T Consensus        17 ~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~   96 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGP   96 (354)
T ss_dssp             ----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECS
T ss_pred             ccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECC
Confidence            347788999999998854  899999999999999999999999999999999987653 34789999999999999999


Q ss_pred             CC-CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc
Q 027867           88 NV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (217)
Q Consensus        88 ~v-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  166 (217)
                      +| ++|++||+|+...                              .+                   |+|+||++++++.
T Consensus        97 ~v~~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~  127 (354)
T 2j8z_A           97 GCQGHWKIGDTAMALL------------------------------PG-------------------GGQAQYVTVPEGL  127 (354)
T ss_dssp             CC--CCCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGG
T ss_pred             CcCCCCCCCCEEEEec------------------------------CC-------------------CcceeEEEeCHHH
Confidence            99 9999999997532                              11                   3999999999999


Q ss_pred             EEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       167 ~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       128 ~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~  178 (354)
T 2j8z_A          128 LMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA  178 (354)
T ss_dssp             EEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             cEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHH
Confidence            99999999999999999999999998778899999999999996 999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.2e-32  Score=236.80  Aligned_cols=161  Identities=23%  Similarity=0.239  Sum_probs=138.2

Q ss_pred             CCCCCceeeeEEeccCCCC--eEE-EEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCC-------------C--CCC
Q 027867           10 TAGKPIQCRAAIATAPGEP--LVI-DEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDF-------------P--AVF   70 (217)
Q Consensus        10 ~~~~~~~~~a~~~~~~~~~--l~~-~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~-------------~--~~~   70 (217)
                      +..++++|||+++.+++.+  +++ +++|.|.| +++||||||++++||++|++++.|..+             .  ..+
T Consensus        15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~   94 (375)
T 2vn8_A           15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF   94 (375)
T ss_dssp             ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred             ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence            3457788999999998754  888 99999985 999999999999999999999887531             1  237


Q ss_pred             CeeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeec
Q 027867           71 PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHF  150 (217)
Q Consensus        71 p~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~  150 (217)
                      |.++|||++|+|+++|++|++|++||+|++...                           ...+                
T Consensus        95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~---------------------------~~~~----------------  131 (375)
T 2vn8_A           95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP---------------------------PWKQ----------------  131 (375)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC---------------------------TTSC----------------
T ss_pred             CcccceeeeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCCC----------------
Confidence            899999999999999999999999999986531                           0112                


Q ss_pred             cccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcC----CCCCCEEEEEcC-ChhccC
Q 027867          151 VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN----VEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       151 ~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~----~~~g~~VlI~Ga-G~vG~~  216 (217)
                         |+|+||++++++.++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++
T Consensus       132 ---G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~  199 (375)
T 2vn8_A          132 ---GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTF  199 (375)
T ss_dssp             ---CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHH
T ss_pred             ---ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHH
Confidence               399999999999999999999999999999899999998767788    999999999996 999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.1e-32  Score=235.71  Aligned_cols=156  Identities=21%  Similarity=0.217  Sum_probs=138.1

Q ss_pred             CceeeeEEeccCCCC---eEEEEeecCCCC--CCeEEEEEeEeeCChhhhhhhhcCCCC-CCCC---------eeeeecc
Q 027867           14 PIQCRAAIATAPGEP---LVIDEVIVDPPN--SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFP---------RILGHEA   78 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~--~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p---------~ilG~e~   78 (217)
                      |++|||+++.+++++   ++++++|.|+|+  ++||||||++++||++|++++.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            467999999999875   899999999887  999999999999999999999987643 3456         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeee
Q 027867           79 IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (217)
Q Consensus        79 ~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~  158 (217)
                      +|+|+++|++|++|++||+|++...                             .+                   |+|+|
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-------------------G~~ae  112 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-------------------GTWRT  112 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-------------------CCSBS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC-----------------------------CC-------------------Ccchh
Confidence            9999999999999999999986421                             11                   39999


Q ss_pred             eEEeccccEEEcCC-----------CCCccccccccchhhhHHHHHHHhcCCCCC-CEEEEEcC-ChhccCC
Q 027867          159 YTVLDIAHVVKVDP-----------TVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFGL-GSIGLAV  217 (217)
Q Consensus       159 ~~~v~~~~~~~~p~-----------~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g-~~VlI~Ga-G~vG~~a  217 (217)
                      |++++.+.++++|+           ++++++||++++++.|||+++.+.+++++| ++|||+|+ |++|+++
T Consensus       113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~a  184 (364)
T 1gu7_A          113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA  184 (364)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHH
T ss_pred             eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHH
Confidence            99999999999998           899999999999999999977666799999 99999998 9999753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.98  E-value=2.7e-32  Score=232.50  Aligned_cols=152  Identities=24%  Similarity=0.277  Sum_probs=132.1

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC--CC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD--FP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~--~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      |||+++.+++.+  ++++++|.|+|+++||||||++++||++|++++.|.+  .. ..+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999988754  8999999999999999999999999999999998865  21 357999999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|+..+.                             .+                   |+|+||++++++.++++|
T Consensus        82 ~~~GdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP-----------------------------PL-------------------GAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS-----------------------------SC-------------------CCSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC-----------------------------CC-------------------CcceeEEEecHHHcEeCC
Confidence            999999965310                             12                   399999999999999999


Q ss_pred             CCCCccc--cccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          172 PTVPPNR--ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~--aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++++++  ||++++++.|||+++.+.+++++|++|||+|+ |++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~  161 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI  161 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHH
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHH
Confidence            9999999  89999999999998777889999999999997 999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.98  E-value=4.3e-32  Score=230.67  Aligned_cols=152  Identities=19%  Similarity=0.190  Sum_probs=135.8

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      |||+++.+++.+  +++++++.|+|+++||||||.+++||++|++++.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999987754  889999999999999999999999999999999987754568999999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      ||+|. ..    +                        ..+                   |+|+||++++.+.++++|+++
T Consensus        82 GdrV~-~~----g------------------------~~~-------------------G~~aey~~v~~~~~~~iP~~l  113 (327)
T 1qor_A           82 GDRVV-YA----Q------------------------SAL-------------------GAYSSVHNIIADKAAILPAAI  113 (327)
T ss_dssp             TCEEE-ES----C------------------------CSS-------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEE-EC----C------------------------CCC-------------------ceeeeEEEecHHHcEECCCCC
Confidence            99993 21    0                        011                   399999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      ++++||.++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~  156 (327)
T 1qor_A          114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLI  156 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHH
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHH
Confidence            999999998999999998777889999999999996 999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.97  E-value=2.7e-32  Score=234.02  Aligned_cols=158  Identities=18%  Similarity=0.214  Sum_probs=132.4

Q ss_pred             CCCceeeeEEec--cC---CCCeEEEEe---------ecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeee
Q 027867           12 GKPIQCRAAIAT--AP---GEPLVIDEV---------IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGH   76 (217)
Q Consensus        12 ~~~~~~~a~~~~--~~---~~~l~~~~~---------~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~   76 (217)
                      ++|.+|||+++.  ++   .+.++++++         |.|+|+++||||||++++||++|++++.|.++. ..+|.++||
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~   85 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGF   85 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCS
T ss_pred             CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccc
Confidence            468899999999  32   222777777         999999999999999999999999999987643 468999999


Q ss_pred             cceEEEEEeCCCC-CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccce
Q 027867           77 EAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS  155 (217)
Q Consensus        77 e~~G~Vv~vG~~v-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~  155 (217)
                      |++|+|+++|++| ++|++||+|++..                           |...+|                   +
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g~~~~G-------------------~  119 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------GLSNWG-------------------S  119 (349)
T ss_dssp             EEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------TTSSCC-------------------S
T ss_pred             eEEEEEEEECCCccCCCCCCCEEEEec---------------------------cCCCCc-------------------c
Confidence            9999999999999 9999999998652                           222333                   9


Q ss_pred             eeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCC-CEEEEEcC-ChhccCC
Q 027867          156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFGL-GSIGLAV  217 (217)
Q Consensus       156 ~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g-~~VlI~Ga-G~vG~~a  217 (217)
                      |+||++++++.++++|+++++++||.+++...|||+ +++.++ ++| ++|||+|+ |++|+++
T Consensus       120 ~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a  181 (349)
T 3pi7_A          120 WAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLI  181 (349)
T ss_dssp             SBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHH
T ss_pred             ceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHH
Confidence            999999999999999999999999999999999996 666666 667 68899865 9999753

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.97  E-value=5.1e-31  Score=227.30  Aligned_cols=152  Identities=20%  Similarity=0.195  Sum_probs=134.3

Q ss_pred             CCceeeeEEeccCCC----CeEE-EEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeC
Q 027867           13 KPIQCRAAIATAPGE----PLVI-DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG   86 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~----~l~~-~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG   86 (217)
                      +|.+|||+++.+++.    .+++ +++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            567899999999874    2889 999999999999999999999999999999987643 4689999999999999999


Q ss_pred             CCCC-CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccc
Q 027867           87 ENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (217)
Q Consensus        87 ~~v~-~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  165 (217)
                      ++|+ +|++||+|++..                               +                   |+|+||++++++
T Consensus       100 ~~V~~~~~vGdrV~~~~-------------------------------~-------------------G~~aey~~v~~~  129 (362)
T 2c0c_A          100 LSASARYTVGQAVAYMA-------------------------------P-------------------GSFAEYTVVPAS  129 (362)
T ss_dssp             TTGGGTCCTTCEEEEEC-------------------------------S-------------------CCSBSEEEEEGG
T ss_pred             CCccCCCCCCCEEEEcc-------------------------------C-------------------CcceeEEEEcHH
Confidence            9999 999999997631                               1                   399999999999


Q ss_pred             cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       166 ~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      .++++|+. + .++|.++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       130 ~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~  179 (362)
T 2c0c_A          130 IATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQF  179 (362)
T ss_dssp             GCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHH
T ss_pred             HeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHH
Confidence            99999986 3 4566777899999998888889999999999996 999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.97  E-value=3.7e-31  Score=224.47  Aligned_cols=156  Identities=17%  Similarity=0.123  Sum_probs=134.1

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++  ++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            799999999876  889999999999999999999999999999999987754 5789999999999999999  57899


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+.                        ..|...+|                   +|+||++++++.++++|++
T Consensus        79 vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  115 (324)
T 3nx4_A           79 AGQEVLLTGW------------------------GVGENHWG-------------------GLAERARVKGDWLVALPAG  115 (324)
T ss_dssp             TTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTT
T ss_pred             CCCEEEEccc------------------------ccCCCCCC-------------------ceeeEEecCHHHcEECCCC
Confidence            9999987531                        02223334                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHH--HhcCCCCCC-EEEEEcC-ChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~Ga-G~vG~~a  217 (217)
                      +++++||++++.+.|||.++.  .+.++++++ +|||+|+ |++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~a  163 (324)
T 3nx4_A          116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTA  163 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHH
Confidence            999999999999999998765  456677643 4999998 9999753

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.97  E-value=5.7e-31  Score=223.97  Aligned_cols=159  Identities=19%  Similarity=0.208  Sum_probs=134.2

Q ss_pred             CCceeeeEEeccCCC--CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCC
Q 027867           13 KPIQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      ||++|||+++.+++.  .++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++  ++
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v   78 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--ND   78 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SS
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CC
Confidence            356799999998872  3899999999999999999999999999999999886543 357899999999999996  46


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      ++|++||||++...                        ..|...+|                   +|+||++++++.+++
T Consensus        79 ~~~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~  115 (330)
T 1tt7_A           79 PRFAEGDEVIATSY------------------------ELGVSRDG-------------------GLSEYASVPGDWLVP  115 (330)
T ss_dssp             TTCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSSEEECGGGEEE
T ss_pred             CCCCCCCEEEEccc------------------------ccCCCCCc-------------------cceeEEEecHHHeEE
Confidence            78999999987531                        01222233                   999999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHH--HhcCCCCCC-EEEEEcC-ChhccC
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLA  216 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~Ga-G~vG~~  216 (217)
                      +|+++++++||++++++.|||.++.  ++.++++|+ +|||+|+ |++|++
T Consensus       116 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~  166 (330)
T 1tt7_A          116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGI  166 (330)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHH
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHH
Confidence            9999999999999989999998654  457889997 9999998 999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=1.9e-30  Score=220.62  Aligned_cols=157  Identities=18%  Similarity=0.154  Sum_probs=133.1

Q ss_pred             ceeeeEEeccCCC--CeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ++|||+++.+++.  .++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++  ++++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~   79 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPR   79 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCC
Confidence            4699999999874  2889999999999999999999999999999999886532 357899999999999995  5678


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||+|++...                        ..|...+|                   +|+||++++++.++++|
T Consensus        80 ~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~~P  116 (328)
T 1xa0_A           80 FREGDEVIATGY------------------------EIGVTHFG-------------------GYSEYARLHGEWLVPLP  116 (328)
T ss_dssp             CCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECC
T ss_pred             CCCCCEEEEccc------------------------cCCCCCCc-------------------cceeEEEechHHeEECC
Confidence            999999987531                        01222233                   99999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHH--HhcCCCCCC-EEEEEcC-ChhccC
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLA  216 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~Ga-G~vG~~  216 (217)
                      +++++++|+++++++.|||.++.  ++.++++|+ +|||+|+ |++|++
T Consensus       117 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~  165 (328)
T 1xa0_A          117 KGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSL  165 (328)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHH
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHH
Confidence            99999999999989999998654  457899997 9999998 999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.96  E-value=2.6e-30  Score=224.18  Aligned_cols=152  Identities=19%  Similarity=0.234  Sum_probs=130.9

Q ss_pred             CceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---------------------------
Q 027867           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---------------------------   66 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---------------------------   66 (217)
                      ..+|||++.......+++++++.|+|+++||||||++++||++|++++.|.++                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            46799998865444499999999999999999999999999999999987521                           


Q ss_pred             --CCCCCeeeeecceEEEEEeCCCC-CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCC
Q 027867           67 --PAVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR  143 (217)
Q Consensus        67 --~~~~p~ilG~e~~G~Vv~vG~~v-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~  143 (217)
                        ...+|.++|||++|+|+++|++| ++|++||+|++.+                               +         
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-------------------------------~---------  124 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-------------------------------G---------  124 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-------------------------------S---------
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-------------------------------C---------
Confidence              13578999999999999999999 8999999998642                               1         


Q ss_pred             CceeeeccccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE--cCChhccCC
Q 027867          144 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF--GLGSIGLAV  217 (217)
Q Consensus       144 ~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~--GaG~vG~~a  217 (217)
                                |+|+||++++.+.++++|+++++++||.+++...|||+ +++... ++|++|||+  |+|++|+++
T Consensus       125 ----------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~vlV~gag~G~vG~~a  188 (379)
T 3iup_A          125 ----------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALG-MVETMR-LEGHSALVHTAAASNLGQML  188 (379)
T ss_dssp             ----------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHH-HHHHHH-HTTCSCEEESSTTSHHHHHH
T ss_pred             ----------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHH-HHHHhc-cCCCEEEEECCCCCHHHHHH
Confidence                      39999999999999999999999999999999999997 455555 899999999  449999753

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.96  E-value=4.4e-29  Score=214.52  Aligned_cols=151  Identities=19%  Similarity=0.289  Sum_probs=129.3

Q ss_pred             CCCceeeeEEe-ccC---CC----CeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhc----CCC-CCCCCeeeeec
Q 027867           12 GKPIQCRAAIA-TAP---GE----PLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKM----KDF-PAVFPRILGHE   77 (217)
Q Consensus        12 ~~~~~~~a~~~-~~~---~~----~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g----~~~-~~~~p~ilG~e   77 (217)
                      .+|++|||+++ ..+   +.    .++++++|.|+| +++||||||++++||++|++.+.+    .+. ...+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            35788999999 555   32    299999999999 999999999999999999987765    232 24678999999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceee
Q 027867           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (217)
Q Consensus        78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  157 (217)
                      ++|+|++  ++|++|++||+|++..                                                   |+|+
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~~---------------------------------------------------G~~a  110 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSFY---------------------------------------------------WPWQ  110 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEEE---------------------------------------------------EESB
T ss_pred             EEEEEEe--cCCCCCCCCCEEEecC---------------------------------------------------CCcE
Confidence            9999999  8899999999997531                                                   3899


Q ss_pred             eeEEeccccEEEcCCCC-----CccccccccchhhhHHHHHHHhcCCCCC--CEEEEEcC-ChhccC
Q 027867          158 EYTVLDIAHVVKVDPTV-----PPNRACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLA  216 (217)
Q Consensus       158 ~~~~v~~~~~~~~p~~~-----~~~~aa~l~~~~~ta~~a~~~~~~~~~g--~~VlI~Ga-G~vG~~  216 (217)
                      ||++++.+.++++|+++     +++ ++.++++++|||+++.+.+++++|  ++|||+|+ |++|++
T Consensus       111 ey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~  176 (357)
T 2zb4_A          111 TKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSV  176 (357)
T ss_dssp             SEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHH
T ss_pred             EEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHH
Confidence            99999999999999999     555 677788999999988788999999  99999998 999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.96  E-value=5.7e-29  Score=212.11  Aligned_cols=146  Identities=21%  Similarity=0.174  Sum_probs=127.0

Q ss_pred             ceeeeEEecc-------CCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeec----ceEEEE
Q 027867           15 IQCRAAIATA-------PGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE----AIGVVE   83 (217)
Q Consensus        15 ~~~~a~~~~~-------~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e----~~G~Vv   83 (217)
                      ++|||+++..       ++. ++++++|.|+|+++||||||++++||++|++.+.+... ..+|.++|||    ++|+|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~   83 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDT-FSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVL   83 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTS-EEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCc-eEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEE
Confidence            5699999985       233 99999999999999999999999999999988876432 2457777777    799999


Q ss_pred             EeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEec
Q 027867           84 SVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (217)
Q Consensus        84 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  163 (217)
                      +.  ++++|++||||+..                                                    |+|+||++++
T Consensus        84 ~~--~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~  109 (336)
T 4b7c_A           84 VS--KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGE  109 (336)
T ss_dssp             EE--CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEEC
T ss_pred             ec--CCCCCCCCCEEecc----------------------------------------------------CCceEEEEec
Confidence            94  58899999999752                                                    3899999999


Q ss_pred             cccEEEcCCCCCcccc--ccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          164 IAHVVKVDPTVPPNRA--CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       164 ~~~~~~~p~~~~~~~a--a~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      .+.++++|+++++.++  +.++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       110 ~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~  165 (336)
T 4b7c_A          110 PKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSV  165 (336)
T ss_dssp             CTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHH
T ss_pred             hHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH
Confidence            9999999999987776  6788899999998889999999999999998 999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.95  E-value=2.9e-28  Score=204.92  Aligned_cols=139  Identities=21%  Similarity=0.250  Sum_probs=124.0

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++++..++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            799999999876567799999999999999999999999999999987653 3679999999999998           9


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|+...                              .+                   |+|+||++++++.++++|++++
T Consensus        70 drV~~~~------------------------------~~-------------------G~~aey~~v~~~~~~~iP~~~~  100 (302)
T 1iz0_A           70 RRYAALV------------------------------PQ-------------------GGLAERVAVPKGALLPLPEGLS  100 (302)
T ss_dssp             EEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             cEEEEec------------------------------CC-------------------cceeeEEEEcHHHcEeCCCCCC
Confidence            9998642                              11                   3999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++||.+++++.|||+++.+.. +++|++|||+|+ |++|++
T Consensus       101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~  141 (302)
T 1iz0_A          101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTA  141 (302)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHH
Confidence            9999999999999999887677 999999999998 999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.94  E-value=1.4e-26  Score=197.16  Aligned_cols=145  Identities=14%  Similarity=0.113  Sum_probs=122.1

Q ss_pred             CceeeeEEeccC--C----CCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCC
Q 027867           14 PIQCRAAIATAP--G----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE   87 (217)
Q Consensus        14 ~~~~~a~~~~~~--~----~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~   87 (217)
                      +++|||+++.+.  +    +.++++++|.|+|+++||||||++++||+.|+.. .   ....+|.++|||++|+|++.  
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE--
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec--
Confidence            567999999874  3    2289999999999999999999999999998732 1   12356789999999999995  


Q ss_pred             CCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        88 ~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      ++++|++||||++.                                                    |+|+||++++.+.+
T Consensus        79 ~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~~  106 (333)
T 1v3u_A           79 KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGL  106 (333)
T ss_dssp             SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTTE
T ss_pred             CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHHe
Confidence            57889999999752                                                    28999999999999


Q ss_pred             EEcCCC----CCccc-cccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          168 VKVDPT----VPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       168 ~~~p~~----~~~~~-aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +++|++    +++++ ++.++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       107 ~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~  161 (333)
T 1v3u_A          107 EKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSV  161 (333)
T ss_dssp             EECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHH
T ss_pred             EEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHH
Confidence            999997    88887 47888899999998878889999999999998 999975

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=3.3e-27  Score=221.59  Aligned_cols=147  Identities=24%  Similarity=0.262  Sum_probs=129.1

Q ss_pred             eeEEeccCCCC--eEEEEeec--CCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           18 RAAIATAPGEP--LVIDEVIV--DPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        18 ~a~~~~~~~~~--l~~~~~~~--p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      ..+.+..+|.+  +++++.+.  |+|+++||+|||+++|||++|++++.|.++   .|.++|||++|+|+++|++|++|+
T Consensus       211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCC
Confidence            44566666654  88877764  678999999999999999999999998764   456899999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|+...                               +                   |+|+||++++.+.++++|++
T Consensus       288 vGDrV~~~~-------------------------------~-------------------G~~ae~~~v~~~~~~~iP~~  317 (795)
T 3slk_A          288 PGDRVMGMI-------------------------------P-------------------KAFGPLAVADHRMVTRIPAG  317 (795)
T ss_dssp             TTCEEEECC-------------------------------S-------------------SCSSSEEEEETTSEEECCTT
T ss_pred             CCCEEEEEe-------------------------------c-------------------CCCcCEEEeehHHEEECCCC
Confidence            999997531                               1                   38999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      +++++||++++++.|||+++++.+++++|++|||+|+ |++|++|
T Consensus       318 ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~a  362 (795)
T 3slk_A          318 WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAA  362 (795)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHH
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHH
Confidence            9999999999999999998888899999999999997 9999763

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.93  E-value=1.2e-25  Score=192.17  Aligned_cols=149  Identities=17%  Similarity=0.155  Sum_probs=120.2

Q ss_pred             CceeeeEEecc-----CCC-CeEEE--EeecCC-CCCCeEEEEEeEeeCChhhhhhhhcCCCC----CCCCeeeeecceE
Q 027867           14 PIQCRAAIATA-----PGE-PLVID--EVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIG   80 (217)
Q Consensus        14 ~~~~~a~~~~~-----~~~-~l~~~--~~~~p~-~~~~eVlV~v~a~~i~~~D~~~~~g~~~~----~~~p~ilG~e~~G   80 (217)
                      |++||++++..     ++. .++++  +++.|. |+++||||||+++++|+.|. .+.+.+..    ..+|+++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            45677776654     342 38888  888887 89999999999999988875 44554322    2468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeee
Q 027867           81 VVES--VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (217)
Q Consensus        81 ~Vv~--vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~  158 (217)
                      +|++  +|+++++|++||+|+..                                                    |+|+|
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~ae  108 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWEE  108 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESBS
T ss_pred             ceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCcee
Confidence            9999  99999999999999742                                                    38999


Q ss_pred             eEEecccc--EEEcCC---CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccC
Q 027867          159 YTVLDIAH--VVKVDP---TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       159 ~~~v~~~~--~~~~p~---~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      |++++.+.  ++++|+   .++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++
T Consensus       109 y~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~  171 (345)
T 2j3h_A          109 YSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQL  171 (345)
T ss_dssp             EEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHH
T ss_pred             EEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHH
Confidence            99998876  999996   35555 67788899999998878899999999999998 999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.67  E-value=3.6e-17  Score=168.06  Aligned_cols=130  Identities=18%  Similarity=0.102  Sum_probs=108.4

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeEeeCChhhhhhhhcCCCCC-------CCCeeeeecceEEEEEeCCCCCCCCCCCEE
Q 027867           29 LVIDEVIVDP-PN--SHEVRVRIICTSLCHSDVTFWKMKDFPA-------VFPRILGHEAIGVVESVGENVDGVVEGDVV   98 (217)
Q Consensus        29 l~~~~~~~p~-~~--~~eVlV~v~a~~i~~~D~~~~~g~~~~~-------~~p~ilG~e~~G~Vv~vG~~v~~~~vGd~V   98 (217)
                      +.+.+.+... +.  ++||+|||.+++||+.|++++.|.++..       ..|.++|+|++|+|.          +||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence            5666555433 22  7899999999999999999998876431       235689999999872          79999


Q ss_pred             eeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCCccc
Q 027867           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR  178 (217)
Q Consensus        99 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~~~~  178 (217)
                      +...                              .+                   |+|+||++++.+.++++|+++++++
T Consensus      1614 ~g~~------------------------------~~-------------------G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV------------------------------PA-------------------EGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC------------------------------SS-------------------CCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee------------------------------cC-------------------CceeeEEEcccceEEEeCCCCCHHH
Confidence            7532                              11                   3899999999999999999999999


Q ss_pred             cccccchhhhHHHHHHHhcCCCCCCEEEEEcC-ChhccCC
Q 027867          179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAV  217 (217)
Q Consensus       179 aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~vG~~a  217 (217)
                      ||+++++++|||+++.+.+++++|++|||+|+ |++|++|
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aA 1684 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAA 1684 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHH
Confidence            99999999999998888899999999999987 9999763

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.71  E-value=6.2e-06  Score=65.93  Aligned_cols=32  Identities=13%  Similarity=0.135  Sum_probs=27.7

Q ss_pred             CCCCCEEeeec-------ccCCCCCccccCCCCCCCCCC
Q 027867           92 VVEGDVVIPHF-------LADCTECVGCRSKKGNLCSAF  123 (217)
Q Consensus        92 ~~vGd~V~~~~-------~~~c~~c~~c~~g~~~~c~~~  123 (217)
                      +++||+|++.+       ...|+.|..|+.|..++|+..
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~   42 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVI   42 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTT
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhc
Confidence            89999999988       778899999999988888654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.07  E-value=9.6e-06  Score=70.42  Aligned_cols=104  Identities=15%  Similarity=0.165  Sum_probs=72.9

Q ss_pred             eeeeecceEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeecc
Q 027867           72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  151 (217)
Q Consensus        72 ~ilG~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~  151 (217)
                      ...|+|.++.|..+|++++++.+|+.++......                        ++.                -..
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~~----------------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AYD----------------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HHH----------------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HHH----------------HHH
Confidence            4689999999999999999999999985321100                        000                000


Q ss_pred             ccceeeeeEEeccccEEEcCCCCCccccccccchhhhHHHHHHHhc---CCCCCCEEEEEcCChhccC
Q 027867          152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       152 ~~g~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~GaG~vG~~  216 (217)
                      ..|++++|+..+...++++|+.++.+.++.. .++.++|.++....   .-.+|++|+|+|+|.+|.+
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~  181 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKT  181 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHH
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHH
Confidence            0136788888887888888888887776654 36777877543222   1257999999999999864

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=91.72  E-value=0.27  Score=33.51  Aligned_cols=25  Identities=32%  Similarity=0.267  Sum_probs=19.8

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD---------GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~---------~~~vGd~V~~~~  102 (217)
                      .-|+|+++|+...         .+++||+|+...
T Consensus        36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~k   69 (95)
T 3nx6_A           36 TKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQ   69 (95)
T ss_dssp             EEEEEEEECSCEECTTSCEECCSCCTTCEEEECT
T ss_pred             cccEEEEECCCeECCCCCEEccccCCCCEEEECC
Confidence            4699999998642         489999998643

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A

Probab=88.43  E-value=0.43  Score=32.79  Aligned_cols=25  Identities=36%  Similarity=0.365  Sum_probs=19.6

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD---------GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~---------~~~vGd~V~~~~  102 (217)
                      ..|+|++||+...         .+++||+|+...
T Consensus        41 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k   74 (100)
T 1we3_O           41 QKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAK   74 (100)
T ss_dssp             SEEEESCCCCCEECTTSCEECCSCCTTCEEEECT
T ss_pred             cCCEEEEECCCcCCCCCCEEeeecCCCCEEEECC
Confidence            4699999998741         489999998643

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=87.81  E-value=0.86  Score=31.19  Aligned_cols=25  Identities=40%  Similarity=0.379  Sum_probs=19.5

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD----------GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~----------~~~vGd~V~~~~  102 (217)
                      ..|+|++||+...          .+++||+|+...
T Consensus        38 ~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~k   72 (99)
T 1p3h_A           38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSK   72 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEEC
T ss_pred             ceEEEEEECCCcCcCCCCEEEccccCCCCEEEECC
Confidence            4699999998631          389999998654

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=87.53  E-value=0.82  Score=31.20  Aligned_cols=24  Identities=38%  Similarity=0.404  Sum_probs=19.0

Q ss_pred             ceEEEEEeCCCC---------CCCCCCCEEeee
Q 027867           78 AIGVVESVGENV---------DGVVEGDVVIPH  101 (217)
Q Consensus        78 ~~G~Vv~vG~~v---------~~~~vGd~V~~~  101 (217)
                      ..|+|++||+..         ..+++||+|+..
T Consensus        36 ~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~   68 (97)
T 1pcq_O           36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFN   68 (97)
T ss_dssp             CEEEEEEECSEECTTSSSCEECSCCTTCEEEEC
T ss_pred             cccEEEEEcCceecCCCCEEecccCCCCEEEEC
Confidence            469999999863         138999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	217
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	4e-41
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-36
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	4e-36
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-32
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-31
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-21
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-18
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	3e-18
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-17
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-16
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	7e-14
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	8e-14
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	8e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-11
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	5e-11
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	6e-11
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	7e-11
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-10
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-09
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	8e-09
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	1e-08
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-07
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-05
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-05
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-04
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-04

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  136 bits (343), Expect = 4e-41
 Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 1/199 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+V  +        + + 
Sbjct: 122 DVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESV 180

Query: 190 VGAAWRTANVEVGSTVVIF 208
             A     + +   TV+  
Sbjct: 181 NDAIDLMKHGKCIRTVLSL 199

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  124 bits (312), Expect = 2e-36
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 12/208 (5%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +    +  P+ 
Sbjct: 2   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL-KEIIPSK 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C         
Sbjct: 61  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP +  N            
Sbjct: 121 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL---------- 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V        +     ++  G G   + +
Sbjct: 170 VSTKLTLDQINKAFELLSSGQGVRSIMI 197

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  123 bits (310), Expect = 4e-36
 Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 1/197 (0%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP +  +     +       
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEIN 179

Query: 191 GAAWRTANVEVGSTVVI 207
            A     + +   TVV 
Sbjct: 180 KAFELMHSGKSIRTVVK 196

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  114 bits (286), Expect = 2e-32
 Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 7/201 (3%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+         A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINAT-DPKKKAL 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC---SAFPFK 126
           FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC     F + 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                  +  +     +G +I+HF+ VSSFS+YTV+  A++ +VD     +     +   
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180

Query: 187 STGVGAAWRTANVEVGSTVVI 207
            +   A      ++ G ++  
Sbjct: 181 ESINDAI---DLMKEGKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  112 bits (280), Expect = 1e-31
 Identities = 73/200 (36%), Positives = 100/200 (50%), Gaps = 5/200 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSG-TLVTP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D          L   V   
Sbjct: 121 GTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFA---LDPLITHVLPF 176

Query: 190 VGAAWRTANVEVGSTVVIFG 209
                    +  G ++    
Sbjct: 177 EKINEGFDLLRSGESIRTIL 196

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 86.2 bits (212), Expect = 1e-21
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 3/191 (1%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
            AA+    G    +  + +  P   EV V+++ T +CH+D+     K      P +LGHE
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHE 63

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G++E++G NV  +  GD V+  +   C +C  C +     CS F  +       +   
Sbjct: 64  GSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNH 122

Query: 138 RF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                 +G    HF + SSF+ Y +    + VKV    P ++             A    
Sbjct: 123 ALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAIDSR 182

Query: 197 ANVEVGSTVVI 207
             + +   + I
Sbjct: 183 KGITLKPIIKI 193

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.0 bits (191), Expect = 1e-18
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 20/200 (10%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPP--NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           P +       +  +     +   DP     H++ ++I    +C SD+            P
Sbjct: 4   PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMP 63

Query: 72  RILGHEAIGVVESVG-ENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            ++GHE +G V  +G ++  G+  G  V +   +  C EC  C++     C+ F    S 
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                               +VS   ++ Y  +    VV +   +      +   GV   
Sbjct: 124 PYE---------------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEA 168

Query: 190 VGAAWRTANVEVGSTVVIFG 209
                   +V    T+V + 
Sbjct: 169 F-ERMEKGDVRYRFTLVGYD 187

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 77.3 bits (189), Expect = 2e-18
 Identities = 49/196 (25%), Positives = 71/196 (36%), Gaps = 26/196 (13%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPR 72
           P   +AA+  A G PL I+EV V  P   +V V+I  + +CH+D+   +         P 
Sbjct: 3   PQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPF 62

Query: 73  ILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           I GHE +G V +VG  V  V EGD V IP     C  C  C +    LC +         
Sbjct: 63  IPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN 122

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                                     EY + D  +V  +   V           ++  + 
Sbjct: 123 GGYA----------------------EYVLADPNYVGILPKNVKATIHPGKLDDINQILD 160

Query: 192 AAWRTANVEVGSTVVI 207
              R   +E G  V+ 
Sbjct: 161 QM-RAGQIE-GRIVLE 174

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 76.9 bits (188), Expect = 3e-18
 Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 16/191 (8%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A  A +  +PL   ++    P  ++V++ I    +CHSD+   + +    V+P + GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G V +VG+ V+    GD V +   +  C  C  C     N C       +   P +  
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG 121

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP-NRACLLSCGVSTGVGAAWR 195
                              +S+  V+   +V+++        RA  ++      +    +
Sbjct: 122 HTLG--------------GYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

Query: 196 TANVEVGSTVV 206
              V    T+ 
Sbjct: 168 YRFVIDNRTLT 178

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 74.5 bits (182), Expect = 2e-17
 Identities = 42/202 (20%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            ++  A +     +PLV  E  +       + V I+   +C SDV  ++ +D     P I
Sbjct: 2   GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 61

Query: 74  LGHEAIGVVESVGENVDGVVEGD-----VVIPHFLADCTECVGCRS-KKGNLCSAFPFKI 127
           LGHE  G V  V      +         +++ +    C EC  C+  K+  LC       
Sbjct: 62  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV-- 119

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGV 186
             +      S +  LRG           +S + VLD    V+KV   +       L    
Sbjct: 120 --YGINRGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN 165

Query: 187 STGVGAAWRTANVEVGSTVVIF 208
                 A           V+++
Sbjct: 166 -----KALELMESREALKVILY 182

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 3e-16
 Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 29/201 (14%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK---DF 66
            A KP    + +   PG+ L ++   +  P  +EV +R+    +C SDV +W+     +F
Sbjct: 2   AAAKP-NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNF 59

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
               P +LGHEA G VE VG +V  +  GD V     A       C+  + NL  +  F 
Sbjct: 60  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
            +P                         +   +   + A   K+   V P          
Sbjct: 120 ATPPDDG---------------------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEK 158

Query: 187 STGVGAAWRTANVEVGSTVVI 207
           +     A+ T    +G  +++
Sbjct: 159 AL---EAFETFKKGLGLKIML 176

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 65.0 bits (157), Expect = 7e-14
 Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 26/194 (13%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILG 75
           +A+     + L +++  +  P   EV +++    +C SDV +++   + DF    P ++G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HEA G V  VG+NV  + +GD V       C  C  C+  K NLC    F  +P      
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD--- 119

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                              + + Y V       K+       +    S  +   V  A+ 
Sbjct: 120 ------------------GNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFE 160

Query: 196 TANVEVGSTVVIFG 209
            A  +  +T+ +  
Sbjct: 161 AARKKADNTIKVMI 174

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 65.0 bits (157), Expect = 8e-14
 Identities = 41/198 (20%), Positives = 70/198 (35%), Gaps = 31/198 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
           RA      G+PL + E+ V  P   +V +++    +CHSDV   +        ++D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +       
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSP------ 115

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                                    +++EY ++     +     V P     +    +  
Sbjct: 116 ----------------RWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 190 VGAAWRTANVEVGSTVVI 207
                      +G  V+I
Sbjct: 160 AIDNLENFKA-IGRQVLI 176

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 8e-12
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
            PP + CL+ CG STG GAA +T  V+ GST V+FGLG +GL+V
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSV 45

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.4 bits (140), Expect = 2e-11
 Identities = 34/200 (17%), Positives = 57/200 (28%), Gaps = 33/200 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +        + L   E       S++  VR +  S C SD+              ILGHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
           A+G V  VG  V     GD VI          +  ++      +           +D   
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV- 119

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                             F EY  ++ A  ++      +P +    LS  V+        
Sbjct: 120 ------------------FGEYFHVNDADMNLAI----LPKDVD--LSKLVTHVYHGFDH 155

Query: 196 TANVEVGSTVVIFGLGSIGL 215
                +   +++       L
Sbjct: 156 -----IEEALLLMKDKPKDL 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 57.3 bits (137), Expect = 5e-11
 Identities = 46/194 (23%), Positives = 64/194 (32%), Gaps = 28/194 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRILGH 76
           +AA+     EPL I EV     +  EV VRI    +CH+D+             P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 77  EAIGVVESVGENVDGV-VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           E +G+VE VG  V  + V   V IP   + C  C  C S +  LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---------- 111

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                         +     ++EY      +VVK+          L        V     
Sbjct: 112 ------------AGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINE---VFDRML 156

Query: 196 TANVEVGSTVVIFG 209
              +  G  V+   
Sbjct: 157 KGQIN-GRVVLTLE 169

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 6e-11
 Identities = 22/41 (53%), Positives = 26/41 (63%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
              R CL+ CG S+G GAA  TA V  GST  +FGLG +GL
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGL 42

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.6 bits (135), Expect = 7e-11
 Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 28/194 (14%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           +AA      +PL I++V         +V VRI    +CH+D+   +      + P++   
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 77  EAIGVVESV---GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
                V  +    E V+G+ +GD VI H       C+ CR+ +   C    F        
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDG- 119

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
                                 F+E+       V+K+   V           ++  +   
Sbjct: 120 ---------------------GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158

Query: 194 WRTANVEVGSTVVI 207
            +   V +G  V+I
Sbjct: 159 EK-GEV-LGRAVLI 170

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 56.0 bits (134), Expect = 1e-10
 Identities = 21/39 (53%), Positives = 26/39 (66%)

Query: 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 214
           P  +CL+ CG +TG GAA  TA V  GST  +FGLG +G
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVG 40

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 51.8 bits (123), Expect = 5e-09
 Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 26/208 (12%)

Query: 18  RAAIATAPGEPLVID------EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           R  +    G+  V        +        H V ++++ T++C SD    +     A   
Sbjct: 3   RGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQVG 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            +LGHE  G V   G +V+ +  GD+V   F   C  C  C+     +C       +   
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTG 189
                          +         +EY ++  A  +++K+           ++  V   
Sbjct: 122 YG------------YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQ 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V +    A    G     F  G     V
Sbjct: 170 VISLDD-APRGYG----EFDAGVPKKFV 192

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 51.1 bits (121), Expect = 8e-09
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           P  + CL+ CG STG G+A + A V  GST  +FGLG +GL+V
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSV 44

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 50.7 bits (120), Expect = 1e-08
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           VP      L CG+ TG GA      V   S+ V +G G++GL+
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLS 43

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 46.6 bits (109), Expect = 3e-07
 Identities = 27/42 (64%), Positives = 31/42 (73%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           P +  CLL CGVSTG GAA  TA VE GST  +FGLG++GLA
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLA 43

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 1e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           P ++ CLL CG+STG GAA  TA +E GS   +FGLG +GLAV
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAV 44

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 10/59 (16%), Positives = 20/59 (33%)

Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
          +A +    G PL + ++        EV +R+    L  +D           + P  +  
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           +P   A +++  ++TG   A   A++E+GS+VV+ G+G++GL 
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLM 42

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 217
              LS  + TG   A   A V  GSTV + G G +GLA 
Sbjct: 4   LTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAA 41

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.6 bits (86), Expect = 5e-04
 Identities = 11/36 (30%), Positives = 14/36 (38%)

Query: 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG 214
             +  C  +T   A         G TVVI G G +G
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLG 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	217
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	100.0
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.97
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.97
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.95
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.95
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.94
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.77
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.91
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	87.27
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	83.14

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=6.6e-43  Score=276.72  Aligned_cols=196  Identities=35%  Similarity=0.562  Sum_probs=179.3

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      .+++++||+++++.++||+++|+++|+|+++|||||+.++|||++|++++.+......+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            46778899999999988999999999999999999999999999999999998777789999999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||||++.+..+|+.|.+|+.+++++|++.......+...+|...+. .++...+++.+.|+||||++++.+.++++|
T Consensus        84 ~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          84 FQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEE-ETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCEEEEeeeccccccccccCCCcccccccccccccccccCccccee-eccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999999999999999999999999999887755666666644443 577888888888999999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      ++++++++|++.+++.|++.++....+.+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999988888889999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=6.1e-41  Score=264.91  Aligned_cols=195  Identities=38%  Similarity=0.598  Sum_probs=171.3

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      -.++|||+++++++++|+++|+|+|+|+++||||||+++|||++|++++.|.+....+|.++|||++|+|+++|++|+++
T Consensus         3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~   82 (197)
T d2fzwa1           3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (197)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceec
Confidence            45789999999999999999999999999999999999999999999999987777899999999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|++.+..+|+.|..|..+.++.|++.......+...+....+. .+|.+..++.+.|+||||+++++.+++++|+
T Consensus        83 ~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~-~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          83 KAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEccccccccccccccCccccCccccccccccccCCccceec-cCCcceecccccccceeEEEechHHEEECCC
Confidence            999999999999999999999999999998655433344434333322 4577888888889999999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      ++++++++.+.+++.|++.++.+...-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999976555556788999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=7.8e-40  Score=259.48  Aligned_cols=193  Identities=37%  Similarity=0.590  Sum_probs=165.7

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCC
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ..+++|||++++++++||+++|+|+|+|+++||||||+++|||++|++++.|.++. .+|.++|||++|+|+++|++|++
T Consensus         4 ~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~v~GHE~~G~V~~vG~~V~~   82 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVLGHECAGIVESVGPGVTN   82 (202)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC-CSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc-ccccccccccceEEeeecCCcee
Confidence            57889999999999988999999999999999999999999999999999997754 68999999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCC---CCC-CCCCCcccccCCCceeeeccccceeeeeEEeccccE
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS---PWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~---~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  167 (217)
                      |++||+|++.+...|+.|..|+.|++++|++......   .+. ..++...+ ..+|...+++.+.|+|+||++++++.+
T Consensus        83 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF-TCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             ccCCCEEEEEeeccccccccccCCcccccccccccccCccceeccccccccc-ccCceeeecccccCCceEEEEEehhhE
Confidence            9999999999999999999999999999998765421   111 12222222 356778888888899999999999999


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEc
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  209 (217)
                      +++|++++++.++.+.+++.+.+.++ +.  +++|++|.|+.
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~-~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAI-DL--MKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHH-HH--HHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHH-Hh--CCCCCEEEEEE
Confidence            99999999998888888888887754 32  46899998864

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=2.2e-40  Score=257.78  Aligned_cols=171  Identities=24%  Similarity=0.376  Sum_probs=152.9

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      +.|++++++++ |+++|+|+|+|+++|||||+++++||++|++++.+...   ...+|+++|||++|+|+++|+++++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            44566788887 99999999999999999999999999999999886542   246789999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++.+...|+.|..|..|..++|++..+.  .+...+|                   +|+||+++++++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~G-------------------~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDDG-------------------NLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBCC-------------------SCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce--ecccccc-------------------ccceeeeecccceeeCCCC
Confidence            999999999999999999999999999887763  2223344                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  210 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga  210 (217)
                      +++++++.+++++.|+|++ ++.+++++|++|||+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a-~~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDA-FEAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHH-HHHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHH-HHHhCCCCCCEEEEEcc
Confidence            9999999999999999996 57889999999999986

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2e-39  Score=251.60  Aligned_cols=173  Identities=27%  Similarity=0.331  Sum_probs=154.8

Q ss_pred             CCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCC
Q 027867           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ++|++|||+++++++++|+++|++.|.|+++|||||+++++||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcc
Confidence            57899999999999988999999999999999999999999999999999998754 57899999999999999999999


Q ss_pred             CCCCCCEEeeec-ccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEE
Q 027867           91 GVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (217)
Q Consensus        91 ~~~vGd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  169 (217)
                      +|++||||++.+ ...|+.|..|..|+.++|.+...   .|...+|                   +|+||++++++++++
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g-------------------g~aey~~v~~~~~~~  138 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG-------------------GYAEYVLADPNYVGI  138 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEE
T ss_pred             ccccCCEEEeccccccCCccccccCCcccccccccc---ccccccc-------------------ccceEEEechHHEEE
Confidence            999999998765 46799999999999999988775   5666666                   899999999999999


Q ss_pred             cCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       170 ~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      +|++++++.++.+.+++.|++++ .+.. ..+|++|||+
T Consensus       139 iPd~l~~~~a~~~~~~~~t~~~~-~~~g-~~~G~~VLVl  175 (175)
T d1llua1         139 LPKNVKATIHPGKLDDINQILDQ-MRAG-QIEGRIVLEM  175 (175)
T ss_dssp             CCTTCCCCEEEECGGGHHHHHHH-HHTT-CCSSEEEEEC
T ss_pred             CCCCCChhHHHHHHhHHHHHHHH-HHhC-CCCCCEEEeC
Confidence            99999998888777888998884 3544 4479999984

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=7.8e-39  Score=252.93  Aligned_cols=194  Identities=37%  Similarity=0.638  Sum_probs=164.8

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ..+..+|||+++++++++|+++|+++|+|+++||||||.+++||++|++++.|.++. .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCcccc
Confidence            456789999999999888999999999999999999999999999999999988764 7899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      ++++||+|++.+..+|+.|.+|+++++++|++.......+...++...+. ..+...+.+.+.|+|+||+++++..++++
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~g~faey~~v~~~~~~ki  160 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKI  160 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEe-eCCeeccccCCCccceeeEEecHHHEEEC
Confidence            99999999999999999999999999999999877654555544444333 45666676767789999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      |+.++++.++...+...+          +.++++|||.|+|++|++
T Consensus       161 p~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl~  196 (198)
T d1p0fa1         161 DPKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSIM  196 (198)
T ss_dssp             CTTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEEE
T ss_pred             CCCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceEE
Confidence            999998776554444332          234556899999999975

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=4.1e-38  Score=248.78  Aligned_cols=194  Identities=36%  Similarity=0.588  Sum_probs=164.8

Q ss_pred             CCCCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC
Q 027867           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        11 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      ..++++|||+++.+++++|+++|+++|+|+++||||||.++|||++|++++.|.++. .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCcccc
Confidence            457889999999999988999999999999999999999999999999999998765 6899999999999999999999


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      ++++||+|++.+..+|+.|..|+.+..++|++.......+...++...+. .++.+.+++.+.|+|+||+++++.+++++
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCcccccc-ccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            99999999999999999999999999999999887755555544433333 56778888888899999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEc
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  209 (217)
                      |+.++++.++...+++.+...+   ...+++|++|+|+.
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTIL  196 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEEE
Confidence            9999887766544444433221   12367899998863

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=9.6e-39  Score=246.97  Aligned_cols=166  Identities=27%  Similarity=0.418  Sum_probs=151.7

Q ss_pred             eeEEeccCCCCeEEEEeecCCC-CCCeEEEEEeEeeCChhhhhhhhcCCCC---CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           18 RAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        18 ~a~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~a~~i~~~D~~~~~g~~~~---~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      ||++++++++||++++++.|++ .++|||||+++++||++|++++.|.++.   ..+|+++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999986 6899999999999999999999887632   46899999999999999999999999


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||||++.+...|+.|..|+.|.+++|++...   .|...+|                   +|+||++++.++++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccc---ceeeccc-------------------ccceeeeehhhcceecCCC
Confidence            99999999999999999999999999988776   5656666                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCCCEEEE
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  207 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI  207 (217)
                      ++++.++++.+++.|+|+++ +.+++ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99998888888999999965 67788 8999998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1e-37  Score=245.71  Aligned_cols=186  Identities=23%  Similarity=0.385  Sum_probs=151.4

Q ss_pred             ceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCC
Q 027867           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (217)
Q Consensus        15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~v   94 (217)
                      ++|+|+++.+.+++|++++++.|+|+++|||||+.+++||++|++++.|.++. ++|.++|||++|+|+++|+++++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc-cCCcccccceEEEeeecCccceeEcc
Confidence            57999999999988999999999999999999999999999999999988764 78999999999999999999999999


Q ss_pred             CCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccc-ccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        95 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~-~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      ||||+.. ..+|++|.+|++|++++|++.......|...+|...+ ....+....++.+.|+|+||.+++..+++++|++
T Consensus        81 GDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          81 GDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             Cceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            9999655 4589999999999999999864333345455553222 2233455667777789999999999999999999


Q ss_pred             CCccccccccchhhhHHHHHHHhcCCCCC
Q 027867          174 VPPNRACLLSCGVSTGVGAAWRTANVEVG  202 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g  202 (217)
                      +++++++.+.....+.+.++.....+..+
T Consensus       160 i~~~~~~~i~g~g~~g~~aiq~a~~~g~~  188 (194)
T d1f8fa1         160 FPFDQLVKFYAFDEINQAAIDSRKGITLK  188 (194)
T ss_dssp             CCGGGGEEEEEGGGHHHHHHHHHHTSCSE
T ss_pred             CCcccEEEEeCcHHHHHHHHHHHHHcCCC
Confidence            99999988876777777755333334333

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-38  Score=244.19  Aligned_cols=171  Identities=24%  Similarity=0.372  Sum_probs=148.3

Q ss_pred             eeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC---CCCCCeeeeecceEEEEEeCCCCCCC
Q 027867           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGV   92 (217)
Q Consensus        16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~---~~~~p~ilG~e~~G~Vv~vG~~v~~~   92 (217)
                      .++|++++++++ |+++|+++|+|+++||||||++++||++|++++.+...   ...+|.++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            478999999988 99999999999999999999999999999999876432   24678999999999999999999999


Q ss_pred             CCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCC
Q 027867           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (217)
Q Consensus        93 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~  172 (217)
                      ++||+|++.+..+|+.|++|+.|++++|.+..+.  .+...+|                   +|+||++++.++++++|+
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~--g~~~~~G-------------------~~aey~~~~~~~~~~lP~  144 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPDDG-------------------NLCRFYKHNAAFCYKLPD  144 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET--TBTTBCC-------------------SCBSEEEEEGGGEEECCT
T ss_pred             cccccceecceeccccchhhccchhchhccceee--ecccccc-------------------cceEEEEEchHHEEECCC
Confidence            9999999999999999999999999999887763  1122334                   899999999999999999


Q ss_pred             CCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCCh
Q 027867          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS  212 (217)
Q Consensus       173 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~  212 (217)
                      ++++++|++++  +++++++ ++..++++|++||| |+|+
T Consensus       145 ~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         145 NVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             TCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             CCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            99999987654  4566664 56778899999998 6654

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-37  Score=242.66  Aligned_cols=177  Identities=18%  Similarity=0.249  Sum_probs=152.2

Q ss_pred             CCCceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        12 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      ..|.+|||+++.++++.  +++.+++.++++++|||||++++|||++|++++.|.++...+|+++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            36889999999888764  6777887777899999999999999999999999988777899999999999999999988


Q ss_pred             -CCCCCCCEEeeecc-cCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCcccccCCCceeeeccccceeeeeEEec
Q 027867           90 -DGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (217)
Q Consensus        90 -~~~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  163 (217)
                       +.+++||||.+.+. ..|+.|.+|+.+++++|.+.....    ..|...+                   |+||||++++
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~-------------------Ggfaey~~v~  142 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVH  142 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEE
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccc-------------------cceeeEEEee
Confidence             57999999987775 579999999999999998876531    1233333                   3999999999


Q ss_pred             cccEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          164 IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       164 ~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      +++++++|++++++.|+++...+.|||+++ +++++++|++|||.
T Consensus       143 ~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         143 EHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             GGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             hHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            999999999999988877765578999954 78999999999974

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=1.3e-38  Score=247.35  Aligned_cols=170  Identities=18%  Similarity=0.094  Sum_probs=144.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||+++.++++ ++++|+|.|.|+++|||||+++++||++|++.+.+......+|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 99999999999999999999999999999988876666668899999999999999999999999999


Q ss_pred             EEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc--ccEEEcCCCC
Q 027867           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI--AHVVKVDPTV  174 (217)
Q Consensus        97 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~~p~~~  174 (217)
                      ||++.+..+|+.|..|+++++++|++.......|...+|                   +|+||+++|.  .+++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G-------------------~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG-------------------VFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC-------------------SSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCCCCh-------------------hcCeeEEEEhhhCeEEECCCCc
Confidence            999999999999999999999999887654334444555                   9999999986  4689999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccCC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV  217 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~a  217 (217)
                      ++++++......   +.++        ++.+||+|+|++|+++
T Consensus       141 ~~~~~~~~~~~~---~~~~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         141 DLSKLVTHVYHG---FDHI--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             CGGGGEEEEEES---GGGH--------HHHHHHHHHCCTTCSE
T ss_pred             chHHHHHHHHHH---HHHh--------cCceEEECCCHHHhhe
Confidence            998876544332   2212        3447888888888753

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2e-37  Score=241.84  Aligned_cols=176  Identities=24%  Similarity=0.355  Sum_probs=146.6

Q ss_pred             CCceeeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCC--
Q 027867           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD--   90 (217)
Q Consensus        13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~--   90 (217)
                      |++++||+++++++++|+++++++|+|+++||||||.++|||++|++++.|.++..++|+++|||++|+|+++|++|+  
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~   80 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDL   80 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCT
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccc
Confidence            467899999999998899999999999999999999999999999999999887778999999999999999999986  


Q ss_pred             ---CCCCCCEEeeecccCCCCCccccCCCCC-CCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEec-cc
Q 027867           91 ---GVVEGDVVIPHFLADCTECVGCRSKKGN-LCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IA  165 (217)
Q Consensus        91 ---~~~vGd~V~~~~~~~c~~c~~c~~g~~~-~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~  165 (217)
                         .+++||+|++.+..+|+.|.+|+.|++. .|++.+..   |+...- ..+.        +  -.|+|+||++++ ..
T Consensus        81 ~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~~~~~-~~~~--------~--~~Gg~ae~~~v~~~~  146 (184)
T d1vj0a1          81 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GINRGC-SEYP--------H--LRGCYSSHIVLDPET  146 (184)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTTCCS-SSTT--------C--CCSSSBSEEEECTTC
T ss_pred             ccccccceeeeEeccccccccChhHhCccccccCCCceee---ccCCCC-CCCC--------C--cceeCcCcEEechhH
Confidence               4689999999999999999999999965 58887653   322100 0000        0  124999999996 57


Q ss_pred             cEEEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEc
Q 027867          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (217)
Q Consensus       166 ~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  209 (217)
                      +++++|++++++.      ++++|+++ ++++++++|++|||+-
T Consensus       147 ~v~~ip~~l~~~~------pl~~A~~a-~~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         147 DVLKVSEKITHRL------PLKEANKA-LELMESREALKVILYP  183 (184)
T ss_dssp             CEEEECTTCCEEE------EGGGHHHH-HHHHHHTSCSCEEEEC
T ss_pred             cEEECCCCCCHHH------HHHHHHHH-HHHhCCCcCCEEEEee
Confidence            8999999999764      34566774 5778999999999973

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=3.7e-36  Score=233.45  Aligned_cols=167  Identities=25%  Similarity=0.399  Sum_probs=143.4

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCC--------CCCCCeeeeecceEEEEEeCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------PAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~--------~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      |||++++++|++|+++|++.|+|+++|||||+.+++||++|++++.|.++        ...+|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999998899999999999999999999999999999999998653        2468999999999999999999


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecccc-E
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-V  167 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-~  167 (217)
                      +++|++||+|++.+...|+.|..|+.+++++|++...   .|...+|                   +||||++++..+ +
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcce---eeecccc-------------------ccccEEEEEhHHeE
Confidence            9999999999999999999999999999999998765   4556666                   999999997654 6


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEE
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  207 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI  207 (217)
                      +++|+..+.+.|+.+..++.+++++ .+..++ .|++|||
T Consensus       139 ~~~~~~~~~~~a~~~~~~~~~a~~~-~~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRRVKPMITKTMKLEEANEAIDN-LENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSSSCCCCEEEEEGGGHHHHHHH-HHTTCC-CSEEEEE
T ss_pred             EECCCCChHHHHHHHHHHHHHHHHH-HHhhcc-cCCceEC
Confidence            6666555544444445688888885 466676 5999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=8.4e-36  Score=230.08  Aligned_cols=168  Identities=27%  Similarity=0.345  Sum_probs=144.6

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCC-CCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~-~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++++++++|+++|++.|+|+++|||||+++++||++|++++.+.. ....+|.++|||++|+|+++|++++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999889999999999999999999999999999999887653 446789999999999999999999999999


Q ss_pred             CEEeeecc-cCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCC
Q 027867           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (217)
Q Consensus        96 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~  174 (217)
                      |+|++.+. ..|+.|..|..+..++|.+...   .|...+|                   +|+||+++++++++++|+++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~  138 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNT  138 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTC
T ss_pred             eEEeeccccccccccccccCCCccccccccc---cceeccC-------------------ccccceEecHHHEEECCCCC
Confidence            99987664 5688999999999999988765   4555555                   99999999999999999999


Q ss_pred             CccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 027867          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  210 (217)
Q Consensus       175 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga  210 (217)
                      +++.|++ . .+.++++++ .++.+ +|++|||+|.
T Consensus       139 ~~e~A~l-~-~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         139 IIEVQPL-E-KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             CEEEEEG-G-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             CHHHHHH-H-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence            9876654 4 456677655 34555 5999999983

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-34  Score=223.72  Aligned_cols=166  Identities=20%  Similarity=0.330  Sum_probs=134.8

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vGd   96 (217)
                      |||++.+++++||+++|++.|+|++||||||+.+++||++|++.+.|.+....+|+++|||++|+|+++|++|++|++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            79999999999999999999999999999999999999999999999887778999999999999999999999999999


Q ss_pred             EEeeec-ccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        97 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      +|.+.+ ..+|+.|++|+.|++++|++............+              ....|+|+||+++++++++++|+...
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~--------------~~~~GgfaEy~~v~~~~~~~ip~~~~  146 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP--------------GHTLGGYSQQIVVHERYVLRIRVADI  146 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT--------------SBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCCC--------------cccccccceEEEechHHEEECCCCCc
Confidence            998766 468999999999999999987643111111111              01124999999999999999996553


Q ss_pred             ccccccccchhhhHHHHHHHhcCCC
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVE  200 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~  200 (217)
                      ...  .. .++.++|+++ .++.++
T Consensus       147 ~~~--~a-~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         147 EMI--RA-DQINEAYERM-LRGDVK  167 (179)
T ss_dssp             EEE--CG-GGHHHHHHHH-HTTCSS
T ss_pred             Chh--Hh-chhHHHHHHH-HHhCcc
Confidence            322  22 2566788755 445543

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=3.6e-36  Score=237.92  Aligned_cols=181  Identities=18%  Similarity=0.241  Sum_probs=142.8

Q ss_pred             eeeEEeccCCCCeEEEEeecCCC-------CCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPP-------NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~-------~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v   89 (217)
                      +||+++.++++ ++++|++.|++       +++|||||+.+++||++|++++.|.++. .+|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~-~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA-QVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC-CTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc-ccceeccceeeeeeecccccc
Confidence            69999999998 99999999865       4599999999999999999999988764 789999999999999999999


Q ss_pred             CCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEecc--ccE
Q 027867           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI--AHV  167 (217)
Q Consensus        90 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~  167 (217)
                      ++|++||||++.+..+|+.|++|++++++.|.........+.....  ...          ...|+|+||+++|.  .++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~--~~~----------~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV--DMG----------DWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT--TSC----------CBCCCSBSEEEESSHHHHC
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc--CCC----------ccccccccEEEeehHHCeE
Confidence            9999999999999999999999999999999776543211111000  000          11259999999985  379


Q ss_pred             EEcCCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcCChhccC
Q 027867          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (217)
Q Consensus       168 ~~~p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~GaG~vG~~  216 (217)
                      ++||++.++.+++.+...+.++++++ +..+.+.++    +|+|++|++
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~  191 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKF  191 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEE
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHH
Confidence            99999877767666666777777743 444444443    477888865

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-32  Score=206.65  Aligned_cols=145  Identities=18%  Similarity=0.272  Sum_probs=130.4

Q ss_pred             eeeeEEeccCCCC--eEEE-EeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           16 QCRAAIATAPGEP--LVID-EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        16 ~~~a~~~~~~~~~--l~~~-~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      .|||+++++++++  ++++ +++.|+|+++||||||++++||++|++.+.|.+.. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            5999999998876  7774 78999999999999999999999999999987754 467899999999999999999999


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      |++||||+....                             .+                   |+|+||++++++.++++|
T Consensus        82 ~~vGdrV~~~~~-----------------------------~~-------------------G~~ae~~~v~~~~~~~iP  113 (150)
T d1yb5a1          82 FKKGDRVFTSST-----------------------------IS-------------------GGYAEYALAADHTVYKLP  113 (150)
T ss_dssp             CCTTCEEEESCC-----------------------------SS-------------------CSSBSEEEEEGGGEEECC
T ss_pred             cccCcccccccc-----------------------------cc-------------------cccccccccccccccccc
Confidence            999999975321                             12                   399999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      +++++++|++++++..|+|++++..+..+.|+++||+
T Consensus       114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999999999988888999999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.4e-30  Score=196.00  Aligned_cols=141  Identities=19%  Similarity=0.191  Sum_probs=122.3

Q ss_pred             eeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      +.++++++|.+  |++++++.|+|+++||||||+|++||++|++++.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            46788999887  9999999999999999999999999999999999998877899999999999999999999999999


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |||+....                             ..                   |+|+||++++.+.++++|++++
T Consensus        82 drV~~~~~-----------------------------~~-------------------G~~ae~~~v~~~~~~~~P~~~~  113 (147)
T d1qora1          82 DRVVYAQS-----------------------------AL-------------------GAYSSVHNIIADKAAILPAAIK  113 (147)
T ss_dssp             CEEEESCC-----------------------------SS-------------------CCSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeecc-----------------------------cc-------------------ccceeEEEEehHHeEEcCcccc
Confidence            99963211                             11                   3899999999999999999998


Q ss_pred             ccccc--cccchhhhHHHHHHHhcCCCCCCEEEE
Q 027867          176 PNRAC--LLSCGVSTGVGAAWRTANVEVGSTVVI  207 (217)
Q Consensus       176 ~~~aa--~l~~~~~ta~~a~~~~~~~~~g~~VlI  207 (217)
                      +++++  .+++..+++++++++ .++++|++|||
T Consensus       114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            87554  456666777776654 68999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=7.6e-31  Score=198.57  Aligned_cols=149  Identities=19%  Similarity=0.125  Sum_probs=126.0

Q ss_pred             CceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCC
Q 027867           14 PIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~   90 (217)
                      +.+|||+++.+++++  ++++++++|+|++|||||||+++|||++|++.+.+.++. ...|+++|+|++|+|++  ..++
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCC
Confidence            357999999999886  557899999999999999999999999999998887654 56899999999999999  5556


Q ss_pred             CCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEc
Q 027867           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (217)
Q Consensus        91 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  170 (217)
                      .|++||+|+....                        ..+..++|                   +||||++++.++++++
T Consensus        79 ~~~~g~~v~~~~~------------------------~~~~~~~G-------------------~~aEy~~v~~~~~~~i  115 (152)
T d1xa0a1          79 RFREGDEVIATGY------------------------EIGVTHFG-------------------GYSEYARLHGEWLVPL  115 (152)
T ss_dssp             SCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSEEEECGGGCEEC
T ss_pred             ccccCCEEEEecC------------------------ccccccCC-------------------CcceeeeehhhccccC
Confidence            8999999975422                        02222333                   9999999999999999


Q ss_pred             CCCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEc
Q 027867          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (217)
Q Consensus       171 p~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  209 (217)
                      |++++ ++||+++++..|+|.++....+++ |++|||+|
T Consensus       116 P~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         116 PKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            99998 568888889899988888888876 99999976

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=6e-30  Score=188.84  Aligned_cols=130  Identities=18%  Similarity=0.190  Sum_probs=116.5

Q ss_pred             eeeEEeccCCCCeEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCCCC
Q 027867           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (217)
Q Consensus        17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~vG   95 (217)
                      |||+++.+++++++++|++.|+|+++|||||+++++||++|++.+.|.++. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            899999999988999999999999999999999999999999999998755 478999999999999           39


Q ss_pred             CEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCCCC
Q 027867           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (217)
Q Consensus        96 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~~~  175 (217)
                      |+|....                              .+                   |+|+||++++++.++++|++++
T Consensus        70 d~V~~~~------------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~  100 (131)
T d1iz0a1          70 RRYAALV------------------------------PQ-------------------GGLAERVAVPKGALLPLPEGRP  100 (131)
T ss_dssp             EEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             ceEEEEe------------------------------cc-------------------CccceeeeeCHHHeEEccCCCC
Confidence            9997542                              11                   3999999999999999999999


Q ss_pred             ccccccccchhhhHHHHHHHhcCCCCCCEEEEE
Q 027867          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (217)
Q Consensus       176 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  208 (217)
                      +++||++.+++.|||++++++++  .|++||++
T Consensus       101 ~~~aa~~~~~~~Ta~~al~~~g~--~g~tvl~l  131 (131)
T d1iz0a1         101 VVGPVFPFAEAEAAFRALLDRGH--TGKVVVRL  131 (131)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTTC--CBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc--CCCEEEEC
Confidence            99999999999999998877664  59999873

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2e-27  Score=178.40  Aligned_cols=130  Identities=14%  Similarity=0.029  Sum_probs=110.6

Q ss_pred             eeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCCCC
Q 027867           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (217)
Q Consensus        17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~~~   93 (217)
                      |||+++.+++++  +++++++.|+|+++||||||+|++||++|++.+.|.++. ..+|.++|+|++|+|+++|..  .++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~~--~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDP--RFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECST--TCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeeccC--Ccc
Confidence            899999998876  778999999999999999999999999999999998654 478999999999999998775  799


Q ss_pred             CCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcCCC
Q 027867           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (217)
Q Consensus        94 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p~~  173 (217)
                      +||+|++...                        ..|...+|                   +||||++++.++++++|++
T Consensus        79 ~g~~v~~~~~------------------------~~g~~~~G-------------------~~Aey~~v~~~~vv~lP~~  115 (146)
T d1o89a1          79 AGQEVLLTGW------------------------GVGENHWG-------------------GLAEQARVKGDWLVAMPQG  115 (146)
T ss_dssp             TTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTT
T ss_pred             ceeeEEeecc------------------------cceecCCC-------------------cceeeeeeeeeeEEECCCC
Confidence            9999986432                        13333444                   9999999999999999999


Q ss_pred             CCccccccccchhhhHHH
Q 027867          174 VPPNRACLLSCGVSTGVG  191 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~  191 (217)
                      +|+++||++++++.||+.
T Consensus       116 ls~~eAA~l~~a~~tA~~  133 (146)
T d1o89a1         116 QAAKEISLSEAPNFAEAI  133 (146)
T ss_dssp             SCCEEECGGGHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            999999999988777754

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.95  E-value=1.5e-29  Score=193.28  Aligned_cols=153  Identities=18%  Similarity=0.157  Sum_probs=127.8

Q ss_pred             ceeeeEEeccCCCC--eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC-CCCCeeeeecceEEEEEeCCCCCC
Q 027867           15 IQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (217)
Q Consensus        15 ~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~-~~~p~ilG~e~~G~Vv~vG~~v~~   91 (217)
                      ++|||+++++.+++  +++++++.|++++|||||||+|++||++|++.+.+.++. ...|.++|+|++|+|++  +.+.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            46999999987766  899999999999999999999999999999999888764 46789999999999999  45568


Q ss_pred             CCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEEEcC
Q 027867           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (217)
Q Consensus        92 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~p  171 (217)
                      +++||+|+....                        ..|...+|                   +|+||++++++.++++|
T Consensus        80 ~~~g~~v~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~l~~iP  116 (162)
T d1tt7a1          80 FAEGDEVIATSY------------------------ELGVSRDG-------------------GLSEYASVPGDWLVPLP  116 (162)
T ss_dssp             CCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSSEEECGGGEEECC
T ss_pred             cccceeeEeeec------------------------cceecccc-------------------ccceEEEecHHHEEECC
Confidence            999999976532                        12333444                   99999999999999999


Q ss_pred             CCCCccccccccchhhhHHHHHHHhcCCCCCCEEEEEcC-Chh
Q 027867          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSI  213 (217)
Q Consensus       172 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~Ga-G~v  213 (217)
                      +++++++||.+++...|||.++ ...+...+++|||.|+ |++
T Consensus       117 ~~ls~~~Aa~~~~~~~ta~~~~-~~~~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1         117 QNLSLKEAMVDQLLTIVDREVS-LEETPGALKDILQNRIQGRV  158 (162)
T ss_dssp             TTCCHHHHHHSCSTTSEEEEEC-STTHHHHHHHTTTTCCSSEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEECCcceE
Confidence            9999999999999999999743 3334455678888887 654

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.94  E-value=1.9e-28  Score=188.79  Aligned_cols=154  Identities=19%  Similarity=0.144  Sum_probs=125.7

Q ss_pred             CceeeeEEeccCCCC---eEE--EEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCC----------CCCCeeeeecc
Q 027867           14 PIQCRAAIATAPGEP---LVI--DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHEA   78 (217)
Q Consensus        14 ~~~~~a~~~~~~~~~---l~~--~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~----------~~~p~ilG~e~   78 (217)
                      +.++||+++.++|+|   +++  .++|.|+|+++||||||++++||++|+++++|.++.          ..+|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            467999999999886   444  567778889999999999999999999999886533          25678999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeee
Q 027867           79 IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (217)
Q Consensus        79 ~G~Vv~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~  158 (217)
                      +|+|+++|..+..++.||+|.....                             ..                   |+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------~~-------------------g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-------------------GTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-------------------CCSBS
T ss_pred             ccccccccccccccccccceecccc-----------------------------cc-------------------ccccc
Confidence            9999999999999999999974321                             11                   38999


Q ss_pred             eEEeccccEEEcCCCCCccccccccchhhhHHHHHHH-hcCCCCCCEEEEEcC--ChhccCC
Q 027867          159 YTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGL--GSIGLAV  217 (217)
Q Consensus       159 ~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~a~~~-~~~~~~g~~VlI~Ga--G~vG~~a  217 (217)
                      |+++++++++++|+.++.+.++  .+...|||+++.. ..++++||+|||+|+  |++|++|
T Consensus       113 y~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~  172 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQL  172 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEE
T ss_pred             eeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheE
Confidence            9999999999999987654444  3467788876553 467999999999974  6799864

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.76  E-value=2.1e-17  Score=123.09  Aligned_cols=133  Identities=14%  Similarity=0.119  Sum_probs=99.8

Q ss_pred             ceeeeEEeccC--CCC----eEEEEeecCCCCCCeEEEEEeEeeCChhhhhhhhcCCCCCCCCeeeeecceEEEEEeCCC
Q 027867           15 IQCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (217)
Q Consensus        15 ~~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlV~v~a~~i~~~D~~~~~g~~~~~~~p~ilG~e~~G~Vv~vG~~   88 (217)
                      ++.|+|++.+.  |.|    |++++.++|+|++||||||+++.++++........    .....++..+++|+|++  ++
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----LKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----SCTTSBCCCCEEEEEEE--ES
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----cccCCccccceEEEEEE--eC
Confidence            45788888765  433    99999999999999999999999999876543322    13344566789999998  66


Q ss_pred             CCCCCCCCEEeeecccCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeeeccccceeeeeEEeccccEE
Q 027867           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (217)
Q Consensus        89 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  168 (217)
                      .++|++||+|...                                                    ++|+||.+++.+.+.
T Consensus        76 ~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l~  103 (147)
T d1v3va1          76 NSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLE  103 (147)
T ss_dssp             CTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSCE
T ss_pred             CCcccCCCEEEEc----------------------------------------------------cCCEeEEEeccceee
Confidence            6789999999642                                                    279999999999999


Q ss_pred             EcCCCCCc-----cccccccchhhhH-HHHHHHhcCCCCCCEEEE
Q 027867          169 KVDPTVPP-----NRACLLSCGVSTG-VGAAWRTANVEVGSTVVI  207 (217)
Q Consensus       169 ~~p~~~~~-----~~aa~l~~~~~ta-~~a~~~~~~~~~g~~VlI  207 (217)
                      ++|+..+.     ...+++.....|| |..++..  .+.||+||+
T Consensus       104 kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1         104 KLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             ECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             EccccccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            99866433     3445566677764 5444433  467999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=8e-07  Score=57.54  Aligned_cols=43  Identities=14%  Similarity=0.224  Sum_probs=36.4

Q ss_pred             CCccccccccchhhhHHHHHH---HhcCCCCCCEEEEEcC-ChhccC
Q 027867          174 VPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGL-GSIGLA  216 (217)
Q Consensus       174 ~~~~~aa~l~~~~~ta~~a~~---~~~~~~~g~~VlI~Ga-G~vG~~  216 (217)
                      +|+++|+.+++++.|||.+++   +....+++++|||+|+ |++|.+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~   47 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGST   47 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHH
Confidence            578999999999999988754   4456789999999988 999965

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.27  E-value=0.45  Score=30.87  Aligned_cols=25  Identities=40%  Similarity=0.379  Sum_probs=19.6

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCEEeeec
Q 027867           78 AIGVVESVGENVD----------GVVEGDVVIPHF  102 (217)
Q Consensus        78 ~~G~Vv~vG~~v~----------~~~vGd~V~~~~  102 (217)
                      ..|+|+++|+...          .+++||+|+...
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~   72 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSK   72 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEEC
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEcc
Confidence            4699999998742          378999998654

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=83.14  E-value=1.5  Score=28.03  Aligned_cols=24  Identities=38%  Similarity=0.407  Sum_probs=19.1

Q ss_pred             ceEEEEEeCCCCC---------CCCCCCEEeee
Q 027867           78 AIGVVESVGENVD---------GVVEGDVVIPH  101 (217)
Q Consensus        78 ~~G~Vv~vG~~v~---------~~~vGd~V~~~  101 (217)
                      ..|+|+++|+...         .+++||+|+..
T Consensus        36 ~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~   68 (97)
T d1aono_          36 TRGEVLAVGNGRILENGEVKPLDVKVGDIVIFN   68 (97)
T ss_dssp             CEEEEEEECSBCCTTSSCCCBCSCCTTCEEEEC
T ss_pred             eeEEEEEEeeeEEccCCcCccccCCCCCEEEEe
Confidence            5699999998643         38999999864