Citrus Sinensis ID: 027935

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
MDERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
ccHHHHHHHHcccEEEEEEccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHcccccccccccHHHHHcc
ccHHHHHHHHHHcEEEEEEccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEEccccccccccccEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHcc
MDERKLQQHLAKSLVVVnigsndyinnylmpstysssssynpqQYADLLINHYTSHIMEVYNLGMRKFLLAAigplgcmpnqlatglappgkcVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTeilnnpvfyglsvtdrgccgigrnrgqitclpfsipcfnrdqylfwhayhpsqaFNEIVARRaysggssdcypmnvkQMALV
mderklqqHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSggssdcypmnvkqmalv
MDERKLQQHLAKSLVVVNIGSNDYINNYLMPstysssssyNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
*********LAKSLVVVNIGSNDYINNYLMPSTY*****YNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG****************
*D*RKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
*********LAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
MDERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query216 2.2.26 [Sep-21-2011]
Q9FNP2385 GDSL esterase/lipase At5g yes no 0.990 0.555 0.566 6e-76
Q9FVV1374 GDSL esterase/lipase At1g no no 1.0 0.577 0.537 4e-68
Q9C7N4363 GDSL esterase/lipase At1g no no 0.976 0.581 0.493 2e-59
Q9C7N5364 GDSL esterase/lipase At1g no no 0.986 0.585 0.481 2e-57
Q9SF78384 GDSL esterase/lipase At1g no no 0.953 0.536 0.464 8e-57
Q93YW8361 GDSL esterase/lipase At4g no no 0.986 0.590 0.457 1e-54
Q9FK75362 GDSL esterase/lipase At5g no no 0.986 0.588 0.425 3e-54
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.962 0.571 0.473 2e-53
Q8L5Z1370 GDSL esterase/lipase At1g no no 0.958 0.559 0.400 1e-45
O23470368 GDSL esterase/lipase At4g no no 0.990 0.581 0.356 3e-38
>sp|Q9FNP2|GDL75_ARATH GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1 Back     alignment and function desciption
 Score =  283 bits (724), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 123/217 (56%), Positives = 172/217 (79%), Gaps = 3/217 (1%)

Query: 1   MDERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEV 60
           M +  +++++AKSLVVV++G+NDYINNYL P  + SSS Y+P  +ADLL++++T+H++E+
Sbjct: 167 MRKESVKEYMAKSLVVVSLGNNDYINNYLKPRLFLSSSIYDPTSFADLLLSNFTTHLLEL 226

Query: 61  YNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSN-- 118
           Y  G RKF++A +GPLGC+P+QLA   A PG+CV  VN+MA+ FN RL +LVD+LNS+  
Sbjct: 227 YGKGFRKFVIAGVGPLGCIPDQLAAQAALPGECVEAVNEMAELFNNRLVSLVDRLNSDNK 286

Query: 119 -YTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQY 177
             +EA FVYGNTYG   +IL NP  YG  VTDRGCCG+GRNRG+ITCLP ++PC  RD++
Sbjct: 287 TASEAIFVYGNTYGAAVDILTNPFNYGFEVTDRGCCGVGRNRGEITCLPLAVPCAFRDRH 346

Query: 178 LFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMA 214
           +FW A+HP+QAFN I+A RA++G  SDCYP+N+ Q++
Sbjct: 347 VFWDAFHPTQAFNLIIALRAFNGSKSDCYPINLSQLS 383

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7N5|GDL14_ARATH GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW8|GDL65_ARATH GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Back     alignment and function description
>sp|Q9FK75|GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q8L5Z1|GDL17_ARATH GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
255553949 373 zinc finger protein, putative [Ricinus c 1.0 0.579 0.652 4e-86
225463203 370 PREDICTED: GDSL esterase/lipase At5g0846 0.986 0.575 0.643 3e-80
297806911 383 predicted protein [Arabidopsis lyrata su 0.990 0.558 0.566 1e-74
15241626 385 GDSL esterase/lipase [Arabidopsis thalia 0.990 0.555 0.566 3e-74
297806889 384 GDSL-motif lipase/hydrolase family prote 0.990 0.557 0.566 4e-74
147821084 385 hypothetical protein VITISV_030206 [Viti 0.967 0.542 0.606 5e-73
225459955 363 PREDICTED: GDSL esterase/lipase At1g7125 0.967 0.575 0.606 5e-73
357464869 384 GDSL esterase/lipase [Medicago truncatul 0.990 0.557 0.560 5e-71
356516450 386 PREDICTED: GDSL esterase/lipase At5g0846 0.990 0.554 0.565 1e-70
357470735 1004 GDSL esterase/lipase [Medicago truncatul 0.990 0.213 0.542 1e-67
>gi|255553949|ref|XP_002518015.1| zinc finger protein, putative [Ricinus communis] gi|223542997|gb|EEF44533.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 141/216 (65%), Positives = 180/216 (83%)

Query: 1   MDERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEV 60
           MD+ KL ++L KSL ++NIGSNDY+NNYLMPS YS+S +YNP+ YA LLI  YT  I+ +
Sbjct: 158 MDDNKLSEYLGKSLALINIGSNDYLNNYLMPSLYSTSFTYNPRDYAHLLIASYTDQILVL 217

Query: 61  YNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYT 120
           ++LG++KF L A+GPLGC+PNQLATGLAPPG C+++VND  + FN +L +LVDQLN N++
Sbjct: 218 HSLGVKKFFLTAVGPLGCIPNQLATGLAPPGNCISFVNDWVEIFNMQLKSLVDQLNHNHS 277

Query: 121 EATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFW 180
           ++ FVYGNTY  F ++L+NP  YG  VTDRGCCGIGRN G ITCLPF+IPCFNRD+Y+FW
Sbjct: 278 DSIFVYGNTYAAFNDVLDNPSSYGFEVTDRGCCGIGRNEGLITCLPFAIPCFNRDKYVFW 337

Query: 181 HAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMALV 216
            AYHP+QAFN I+A+RAYSG  SDCYP+N+KQMAL+
Sbjct: 338 DAYHPTQAFNRIMAQRAYSGPPSDCYPINIKQMALI 373

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225463203|ref|XP_002267889.1| PREDICTED: GDSL esterase/lipase At5g08460 [Vitis vinifera] gi|296084819|emb|CBI27701.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297806911|ref|XP_002871339.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297317176|gb|EFH47598.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15241626|ref|NP_196463.1| GDSL esterase/lipase [Arabidopsis thaliana] gi|75171899|sp|Q9FNP2.1|GDL75_ARATH RecName: Full=GDSL esterase/lipase At5g08460; AltName: Full=Extracellular lipase At5g08460; Flags: Precursor gi|9759340|dbj|BAB09995.1| GDSL-motif lipase/acylhydrolase-like protein [Arabidopsis thaliana] gi|332003923|gb|AED91306.1| GDSL esterase/lipase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297806889|ref|XP_002871328.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297317165|gb|EFH47587.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147821084|emb|CAN77693.1| hypothetical protein VITISV_030206 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225459955|ref|XP_002266194.1| PREDICTED: GDSL esterase/lipase At1g71250 [Vitis vinifera] gi|297734752|emb|CBI16986.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357464869|ref|XP_003602716.1| GDSL esterase/lipase [Medicago truncatula] gi|355491764|gb|AES72967.1| GDSL esterase/lipase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356516450|ref|XP_003526907.1| PREDICTED: GDSL esterase/lipase At5g08460-like [Glycine max] Back     alignment and taxonomy information
>gi|357470735|ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query216
TAIR|locus:2159547385 AT5G08460 "AT5G08460" [Arabido 0.990 0.555 0.557 4.4e-68
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 1.0 0.577 0.523 1.6e-61
TAIR|locus:2013663363 AT1G29670 "AT1G29670" [Arabido 0.976 0.581 0.479 1.6e-54
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.935 0.526 0.468 2.1e-52
TAIR|locus:2013658364 AT1G29660 "AT1G29660" [Arabido 0.986 0.585 0.462 3.5e-52
TAIR|locus:2171948362 AT5G45670 "AT5G45670" [Arabido 0.986 0.588 0.415 2.8e-50
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.962 0.571 0.454 6.7e-49
TAIR|locus:505006166370 AT1G33811 "AT1G33811" [Arabido 0.976 0.570 0.385 1.1e-41
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.986 0.550 0.333 4.6e-34
TAIR|locus:2074840374 AT3G50400 "AT3G50400" [Arabido 0.972 0.561 0.331 4.2e-31
TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 121/217 (55%), Positives = 167/217 (76%)

Query:     1 MDERKLQQHLAKSLVVVNIGSNDYINNYLMPXXXXXXXXXNPQQYADLLINHYTSHIMEV 60
             M +  +++++AKSLVVV++G+NDYINNYL P         +P  +ADLL++++T+H++E+
Sbjct:   167 MRKESVKEYMAKSLVVVSLGNNDYINNYLKPRLFLSSSIYDPTSFADLLLSNFTTHLLEL 226

Query:    61 YNLGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNS-NY 119
             Y  G RKF++A +GPLGC+P+QLA   A PG+CV  VN+MA+ FN RL +LVD+LNS N 
Sbjct:   227 YGKGFRKFVIAGVGPLGCIPDQLAAQAALPGECVEAVNEMAELFNNRLVSLVDRLNSDNK 286

Query:   120 T--EATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQY 177
             T  EA FVYGNTYG   +IL NP  YG  VTDRGCCG+GRNRG+ITCLP ++PC  RD++
Sbjct:   287 TASEAIFVYGNTYGAAVDILTNPFNYGFEVTDRGCCGVGRNRGEITCLPLAVPCAFRDRH 346

Query:   178 LFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMA 214
             +FW A+HP+QAFN I+A RA++G  SDCYP+N+ Q++
Sbjct:   347 VFWDAFHPTQAFNLIIALRAFNGSKSDCYPINLSQLS 383
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013663 AT1G29670 "AT1G29670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006166 AT1G33811 "AT1G33811" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074840 AT3G50400 "AT3G50400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00003646001
SubName- Full=Chromosome undetermined scaffold_147, whole genome shotgun sequence; (370 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 3e-73
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 1e-39
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 9e-25
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 5e-12
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 7e-10
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 7e-06
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  224 bits (572), Expect = 3e-73
 Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 5/199 (2%)

Query: 3   ERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYN 62
           E      L+KSL +++IGSNDY+NNY    T      Y  + Y   L+++ +S I  +Y+
Sbjct: 120 EEAAADILSKSLFLISIGSNDYLNNYFANPTRQ----YEVEAYVPFLVSNISSAIKRLYD 175

Query: 63  LGMRKFLLAAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEA 122
           LG RKF++  +GPLGC+P+Q        G C+  +N++A+ FN +L  L+ +L      A
Sbjct: 176 LGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGA 235

Query: 123 TFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPF-SIPCFNRDQYLFWH 181
            FVY + Y    +++ NP  YG   T + CCG G   G + C P  S  C +  +Y+FW 
Sbjct: 236 KFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWD 295

Query: 182 AYHPSQAFNEIVARRAYSG 200
             HP++A N I+A    SG
Sbjct: 296 GVHPTEAANRIIADALLSG 314

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 216
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 99.96
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.87
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.25
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 99.22
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.19
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.19
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.17
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.13
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 99.11
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.09
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.06
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 99.05
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 99.03
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.02
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.02
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.01
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 98.99
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 98.98
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 98.96
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.95
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 98.93
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 98.93
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.86
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 98.86
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 98.86
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 98.83
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.73
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 98.7
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.69
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 98.66
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.26
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.01
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 97.24
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.74
KOG3670397 consensus Phospholipase [Lipid transport and metab 96.58
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 95.46
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 92.23
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 88.95
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 88.1
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.9e-47  Score=331.68  Aligned_cols=197  Identities=33%  Similarity=0.672  Sum_probs=173.2

Q ss_pred             ChHHHHHHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCcccc
Q 027935            2 DERKLQQHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPN   81 (216)
Q Consensus         2 g~~~~~~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~   81 (216)
                      |+++++++.+++||+||||+|||+..|+..+  .+....+++++++.+++.+.+.|++||++|||+|+|+++||+||+|.
T Consensus       148 g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~--~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~  225 (351)
T PLN03156        148 GEEKANEIISEALYLISIGTNDFLENYYTFP--GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPL  225 (351)
T ss_pred             ChHHHHHHHhcCeEEEEecchhHHHHhhccc--cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHH
Confidence            5566778899999999999999986554221  11223456789999999999999999999999999999999999999


Q ss_pred             ccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCc
Q 027935           82 QLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQ  161 (216)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~  161 (216)
                      .+.....+..+|.+.++.++..||++|+.++++|++++||++|+++|+|+++.++++||++|||++++++||+.|.++..
T Consensus       226 ~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~  305 (351)
T PLN03156        226 ERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMG  305 (351)
T ss_pred             HHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCc
Confidence            76542223457999999999999999999999999999999999999999999999999999999999999999888887


Q ss_pred             cccCCCC-CCCCCCCCceeeCCCChHHHHHHHHHHHHhcC
Q 027935          162 ITCLPFS-IPCFNRDQYLFWHAYHPSQAFNEIVARRAYSG  200 (216)
Q Consensus       162 ~~c~~~~-~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~  200 (216)
                      ..|++.. ..|++|++|+|||++|||+++|+++|+.+++.
T Consensus       306 ~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~  345 (351)
T PLN03156        306 YLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKT  345 (351)
T ss_pred             cccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence            8899765 58999999999999999999999999999885

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query216
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 3e-36
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  132 bits (334), Expect = 3e-36
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 24/201 (11%)

Query: 11  AKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLL 70
             +L  +  G ND++   ++            QQ A  L++     +  +   G R  ++
Sbjct: 146 PNALYYITGGGNDFLQGRILND-------VQAQQAAGRLVDS----VQALQQAGARYIVV 194

Query: 71  AAIGPLGCMPNQLATGLAPPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTY 130
             +  LG  P               + + ++  FN  LTA + Q  +N      +  N  
Sbjct: 195 WLLPDLGLTPATFGGP------LQPFASQLSGTFNAELTAQLSQAGAN-----VIPLNIP 243

Query: 131 GLFTEILNNPVFYGLSVTDR--GCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQA 188
            L  E + NP  +GL+      G C  G           +    +  + LF  + HP+  
Sbjct: 244 LLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTIT 303

Query: 189 FNEIVARRAYSGGSSDCYPMN 209
              ++A   YS  S+      
Sbjct: 304 GQRLIADYTYSLLSAPWELTL 324

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.41
2hsj_A214 Putative platelet activating factor; structr genom 99.41
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.37
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.32
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.29
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.29
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.23
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.17
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 99.15
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.13
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.13
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.08
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.99
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 98.96
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 98.94
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 98.92
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 98.79
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 98.63
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.62
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.6
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 98.57
3bzw_A274 Putative lipase; protein structure initiative II, 98.49
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.38
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.2
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 91.07
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=7.1e-40  Score=303.01  Aligned_cols=178  Identities=21%  Similarity=0.305  Sum_probs=158.4

Q ss_pred             HHhcCccEEEEeccchhhhhhcCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCcccccccccc
Q 027935            8 QHLAKSLVVVNIGSNDYINNYLMPSTYSSSSSYNPQQYADLLINHYTSHIMEVYNLGMRKFLLAAIGPLGCMPNQLATGL   87 (216)
Q Consensus         8 ~~~~~~L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~L~~~Gar~~vv~~lp~l~~~P~~~~~~~   87 (216)
                      ++.+++||+||||+|||+..++.           ..++++.+++++..+|++|+++|||+|+|+++||+||+|...    
T Consensus       143 ~~~~~sL~~v~iG~ND~~~~~~~-----------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~----  207 (632)
T 3kvn_X          143 GADPNALYYITGGGNDFLQGRIL-----------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF----  207 (632)
T ss_dssp             CCCTTSEEEECCSHHHHHTTCCC-----------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT----
T ss_pred             ccCCCCEEEEEEechhhhccccc-----------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc----
Confidence            46789999999999999865432           136789999999999999999999999999999999999952    


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEecchHHHHHHHhCCCCCCccccC--cccccccccCCccccC
Q 027935           88 APPGKCVAYVNDMAQAFNTRLTALVDQLNSNYTEATFVYGNTYGLFTEILNNPVFYGLSVTD--RGCCGIGRNRGQITCL  165 (216)
Q Consensus        88 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~--~~C~~~g~~~~~~~c~  165 (216)
                        ..+|.+.++.++..||++|++++++|+     .+|+++|+|+++.++++||++|||+++.  .+||+.|.     .|+
T Consensus       208 --~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~  275 (632)
T 3kvn_X          208 --GGPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCT  275 (632)
T ss_dssp             --TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSC
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccC
Confidence              247999999999999999999999884     4899999999999999999999999975  69999763     687


Q ss_pred             CC-----CCCCCCCCCceeeCCCChHHHHHHHHHHHHhcCCCCCcCCCChHHhhc
Q 027935          166 PF-----SIPCFNRDQYLFWHAYHPSQAFNEIVARRAYSGGSSDCYPMNVKQMAL  215 (216)
Q Consensus       166 ~~-----~~~c~~~~~y~f~D~~HPT~~~h~~ia~~~~~~~~~~~~p~~~~~~~~  215 (216)
                      +.     ...|++|++|+|||++|||+++|++||+.+++.   +..|+++++|++
T Consensus       276 ~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~  327 (632)
T 3kvn_X          276 MNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSL---LSAPWELTLLPE  327 (632)
T ss_dssp             BCTTTSTTSSSCCGGGCSBSSSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHH
T ss_pred             CcccccccccCCCccceEEecCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHH
Confidence            64     468999999999999999999999999999996   579999998875
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query216
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.29
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 99.17
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.02
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.98
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 98.97
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.97
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.86
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.64
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.58
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 98.58
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 97.94
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.29  E-value=1.4e-11  Score=100.57  Aligned_cols=129  Identities=9%  Similarity=-0.038  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHHHHc-CCeEEEEecCCCCCc---cccccccccCC-------CCccchHHHHHHHHHHHHHHHHHHHHH
Q 027935           48 LLINHYTSHIMEVYNL-GMRKFLLAAIGPLGC---MPNQLATGLAP-------PGKCVAYVNDMAQAFNTRLTALVDQLN  116 (216)
Q Consensus        48 ~~~~~i~~~v~~L~~~-Gar~~vv~~lp~l~~---~P~~~~~~~~~-------~~~~~~~~~~~~~~~N~~L~~~l~~l~  116 (216)
                      .+..++...++++.+. +--+|++++.|++.-   .|.........       .......++.+...+|..+++...   
T Consensus       157 ~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~---  233 (302)
T d1esca_         157 RVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA---  233 (302)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH---
Confidence            3444444555555443 333689999886531   00000000000       112244566778888888876543   


Q ss_pred             hhCCCceEEEecchHHHHHHHhCCCCCCccccCcccccccccCCccccCCCCCCCCCCCCceeeCCCChHHHHHHHHHHH
Q 027935          117 SNYTEATFVYGNTYGLFTEILNNPVFYGLSVTDRGCCGIGRNRGQITCLPFSIPCFNRDQYLFWHAYHPSQAFNEIVARR  196 (216)
Q Consensus       117 ~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~C~~~g~~~~~~~c~~~~~~c~~~~~y~f~D~~HPT~~~h~~ia~~  196 (216)
                          ..++.++|++..|.       .+++....++|....          ......++..+++||.+|||++||++||+.
T Consensus       234 ----~~~v~~vd~~~~f~-------~~~~c~~~~~~~~~~----------~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~  292 (302)
T d1esca_         234 ----DGGADFVDLYAGTG-------ANTACDGADRGIGGL----------LEDSQLELLGTKIPWYAHPNDKGRDIQAKQ  292 (302)
T ss_dssp             ----TTTCEEECTGGGCT-------TSSTTSTTSCSBCCS----------SSEEEEESSSCEEECSSCBCHHHHHHHHHH
T ss_pred             ----HcCCEEEechhhhc-------ccccccccccccccc----------ccccccccccccccCCcCCCHHHHHHHHHH
Confidence                23567999997763       233332223332210          011122577889999999999999999999


Q ss_pred             HhcC
Q 027935          197 AYSG  200 (216)
Q Consensus       197 ~~~~  200 (216)
                      +.+.
T Consensus       293 i~~~  296 (302)
T d1esca_         293 VADK  296 (302)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9883
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure