Citrus Sinensis ID: 027998

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
Protein Sequence
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQAEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM
Secondary Structure (PSIPRED)
cEEEEEEEcccccEEEEEEcccccccHHHcccccccEEEEEccccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccEEEEEcccEEEEEEEHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEccccccEEEEEcccccccHHHHHccccccEEEEEccccccEEEEEcccccccccccHHHHHHHHHHHHHccccccccccEEEEEEcHHHccccccccccEEEccccccEEEEEEEcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHccccccccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
mvfyfkarpeagdytifmgldkyeneelikygfpediwfhvdkmsSAHVYLRLHkgqtiddisegvLEDCAQLVKANsiqgnkvnnidvvytpwanlkktasmdvgqvgfhnpkmvRTVKVEKRINEIVNRLNktkverkpdLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQAEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM
Flexible Loop (DISEMBL)
mvfyfkarpeagdytiFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKansiqgnkvnnIDVVYTPWANLKKTAsmdvgqvgfhnpkmvrtvkvekRINEivnrlnktkverkpdlkaerEAANAAERaerklqlrdkkrreemerlekerqaevrsykglmvaekmtsnkqiaseskslqeleedfm
Low Complexity Region (SEG)
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKPDLKaereaanaaeraerKLQLrdkkrreemerlekerQAEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM
Disordered region (IsUnstruct)
**FYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNR************************************************************************************
Disordered Region (DISOPRED)
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKPDLKAERE***********************************SYKGLMVAEK***************ELEEDFM
Disordered Region (DISEMBL)
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERK*******************LQLRDKKRREEMERLEKERQAEVRSYKGLMVAEKMT********************
Disordered Region (DISPRO)
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRRE*******E*********GLMV*************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKPDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAEVRSYKGLMVAExxxxxxxxxxxxxxxxxxxxxFM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	215	2.2.26 [Sep-21-2011]
Q3SZX8	208	Coiled-coil domain-contai	yes	no	0.920	0.951	0.638	1e-66
Q5R9S1	208	Coiled-coil domain-contai	yes	no	0.920	0.951	0.638	3e-66
Q86WR0	208	Coiled-coil domain-contai	yes	no	0.920	0.951	0.633	3e-66
Q78PG9	208	Coiled-coil domain-contai	yes	no	0.920	0.951	0.623	4e-65
Q6GLE1	206	Coiled-coil domain-contai	yes	no	0.916	0.956	0.641	1e-64
Q7T312	207	Coiled-coil domain-contai	yes	no	0.916	0.951	0.609	5e-64
Q55D55	206	Coiled-coil domain-contai	yes	no	0.953	0.995	0.472	2e-52
P40206	208	Protein JLP2 OS=Saccharom	yes	no	0.641	0.663	0.454	5e-30

>sp|Q3SZX8|CCD25_BOVIN Coiled-coil domain-containing protein 25 OS=Bos taurus GN=CCDC25 PE=2 SV=1

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 1/199 (0%)

Query: 1   MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
           MVFYF +    +  YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKI 60

Query: 60  DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
           +DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
            VEK++NEI+NRL KTK+ER PDL+AE+E  +  ER E+K Q+++ KRRE+ E  +K   
Sbjct: 121 TVEKKVNEILNRLEKTKMERFPDLEAEKECRDHEERNEKKAQIQEMKRREKEEMKKKREM 180

Query: 180 AEVRSYKGLMVAEKMTSNK 198
            E+RSY  LM  E M+SN+
Sbjct: 181 DELRSYSSLMKVENMSSNQ 199

Bos taurus (taxid: 9913)

>sp|Q5R9S1|CCD25_PONAB Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25 PE=2 SV=2

 Score =  251 bits (640), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 127/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%)

Query: 1   MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
           MVFYF +    +  YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60

Query: 60  DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
           +DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
            VEK++NEI+NRL KTKVER PDL AE+E  +  ER E+K Q+++ KRRE+ E  +K   
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKRREKEEMKKKREM 180

Query: 180 AEVRSYKGLMVAEKMTSNK 198
            E+RSY  LM  E M+SN+
Sbjct: 181 DELRSYSSLMKVENMSSNQ 199

Pongo abelii (taxid: 9601)

>sp|Q86WR0|CCD25_HUMAN Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25 PE=1 SV=2

 Score =  251 bits (640), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 1/199 (0%)

Query: 1   MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
           MVFYF +    +  YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1   MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60

Query: 60  DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
           +DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
            VEK++NEI+NRL KTKVER PDL AE+E  +  ER E+K Q+++ K+RE+ E  +K   
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQEMKKREKEEMKKKREM 180

Query: 180 AEVRSYKGLMVAEKMTSNK 198
            E+RSY  LM  E M+SN+
Sbjct: 181 DELRSYSSLMKVENMSSNQ 199

Homo sapiens (taxid: 9606)

>sp|Q78PG9|CCD25_MOUSE Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25 PE=1 SV=1

 Score =  247 bits (631), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 124/199 (62%), Positives = 156/199 (78%), Gaps = 1/199 (0%)

Query: 1   MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
           MVFYF +    +  YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL KG+ I
Sbjct: 1   MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKI 60

Query: 60  DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
           +DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct: 61  EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
            VEK++NEI+NRL KTK+E+ PDL AE+E  +  ER E+K Q+++ KR+E+ E  +K   
Sbjct: 121 TVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQEMKRKEKEEMKKKREM 180

Query: 180 AEVRSYKGLMVAEKMTSNK 198
            E+RSY  LM  E M+SN+
Sbjct: 181 DELRSYSSLMKVENMSSNQ 199

Mus musculus (taxid: 10090)

>sp|Q6GLE1|CCD25_XENTR Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis GN=ccdc25 PE=2 SV=1

 Score =  245 bits (626), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/198 (64%), Positives = 159/198 (80%), Gaps = 1/198 (0%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYF +   +  YT++MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL K QTI+
Sbjct: 1   MVFYFTSNVISPPYTMYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKDQTIE 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DI + VL DCAQLVKANSIQG K+NNI+VVYTPWANLKKTA MD+GQ+GFH  K V+T+ 
Sbjct: 61  DIPKEVLLDCAQLVKANSIQGCKMNNINVVYTPWANLKKTADMDIGQIGFHRQKDVKTMT 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEK +++IVNRL KTK ER PDL AE+EA +  ER E+K Q+++ KR+E+ E  +K+   
Sbjct: 121 VEK-VSKIVNRLEKTKDERFPDLAAEKEARDREERNEKKAQIQEIKRKEKEEMKKKKEMD 179

Query: 181 EVRSYKGLMVAEKMTSNK 198
           E+RSY  LM +E M+SN+
Sbjct: 180 ELRSYSSLMKSENMSSNQ 197

Xenopus tropicalis (taxid: 8364)

>sp|Q7T312|CCD25_DANRE Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25 PE=1 SV=1

 Score =  243 bits (621), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 120/197 (60%), Positives = 157/197 (79%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYF +   +  +TI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLR+ KG TID
Sbjct: 1   MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DI + VL DC QLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH  K V+ V 
Sbjct: 61  DIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVA 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEK+INEIVNRL KTK ER PDL AE+E+ +  ER E+K Q++++K++E+ E  +K+   
Sbjct: 121 VEKKINEIVNRLEKTKEERYPDLAAEKESRDREERNEKKAQIQEQKKKEKEEVKKKKEME 180

Query: 181 EVRSYKGLMVAEKMTSN 197
           ++++Y  LM ++ MT+N
Sbjct: 181 DLKNYTSLMKSDNMTTN 197

Danio rerio (taxid: 7955)

>sp|Q55D55|CCD25_DICDI Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium discoideum GN=ccdc25 PE=3 SV=1

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 151/216 (69%), Gaps = 11/216 (5%)

Query: 1   MVFYFK-ARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
           MV YFK   PE   Y  +MG+DK+ENE+LIKYG+PED+WFHV+ +SSAHVYLRL KG+T 
Sbjct: 1   MVLYFKLIDPE---YICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETW 57

Query: 60  DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
           +DI   +LE+C QLVK NSIQG K  ++D+VYTPWANLKKTA M+ GQV +HN + V+ V
Sbjct: 58  NDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYV 117

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
           +  ++ ++I+NR+ KT+ +R+ DL  ER++ + +ER E++ +  +K+R E+    EK++ 
Sbjct: 118 RNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEKRRAEKKAYEEKQKM 177

Query: 180 AEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
            +++ Y  +M  + M  NK   ++       E+DFM
Sbjct: 178 EDIKKYTSIMKTDNMKFNKYNPTD-------EDDFM 206

Dictyostelium discoideum (taxid: 44689)

>sp|P40206|JLP2_YEAST Protein JLP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JLP2 PE=1 SV=2

 Score =  130 bits (328), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 95/143 (66%), Gaps = 5/143 (3%)

Query: 1   MVFYFKARPE--AGDYTIFMGLDKYENEELIKYGFPE--DIWFHVDKMSSAHVYLRLHKG 56
           MV++++++P   +  Y I MG DK+EN+ LIK+ + E   +WFH DK SS HVYL+L   
Sbjct: 1   MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPN 60

Query: 57  Q-TIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKM 115
           + TIDDI + V+ DC QL K+ SIQGNK+    ++ TPW NL+K   M+ G+V F + + 
Sbjct: 61  EKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQ 120

Query: 116 VRTVKVEKRINEIVNRLNKTKVE 138
            R ++   R N+I+NRL KT+VE
Sbjct: 121 CRKMECGARDNKILNRLAKTRVE 143

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
255551042	215	Coiled-coil domain-containing protein, p	1.0	1.0	0.948	1e-117
224092326	215	predicted protein [Populus trichocarpa]	1.0	1.0	0.953	1e-117
224143008	216	predicted protein [Populus trichocarpa]	1.0	0.995	0.935	1e-115
225430019	215	PREDICTED: coiled-coil domain-containing	1.0	1.0	0.925	1e-115
359806270	215	uncharacterized protein LOC100802228 [Gl	1.0	1.0	0.916	1e-113
449437028	215	PREDICTED: coiled-coil domain-containing	1.0	1.0	0.916	1e-113
449523249	215	PREDICTED: coiled-coil domain-containing	1.0	1.0	0.911	1e-113
242089965	215	hypothetical protein SORBIDRAFT_09g00731	1.0	1.0	0.902	1e-112
226495995	215	LOC100283739 [Zea mays] gi|194707814|gb|	1.0	1.0	0.902	1e-112
357134245	215	PREDICTED: coiled-coil domain-containing	1.0	1.0	0.897	1e-112

>gi|255551042|ref|XP_002516569.1| Coiled-coil domain-containing protein, putative [Ricinus communis] gi|223544389|gb|EEF45910.1| Coiled-coil domain-containing protein, putative [Ricinus communis]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/215 (94%), Positives = 212/215 (98%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPE GDYTIFMGLDKYENEELI+YGFPEDIWFHVDKMSSAHVYLRL+KGQTID
Sbjct: 1   MVFYFKARPEVGDYTIFMGLDKYENEELIRYGFPEDIWFHVDKMSSAHVYLRLNKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEG+LEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHN KMVRTV+
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLN+TKVERKPDLKAEREA NAAERAERKLQLRDKKRREEMERLEKERQA
Sbjct: 121 VEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMV+EKMTSNKQIASE+KSLQELEEDFM
Sbjct: 181 EIRSYKGLMVSEKMTSNKQIASENKSLQELEEDFM 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092326|ref|XP_002309559.1| predicted protein [Populus trichocarpa] gi|222855535|gb|EEE93082.1| predicted protein [Populus trichocarpa]

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/215 (95%), Positives = 210/215 (97%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEAGDYTIFMGLDK+ENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID
Sbjct: 1   MVFYFKARPEAGDYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
            ISEGVLEDC QLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHN KMVRTV+
Sbjct: 61  GISEGVLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLNKTKVERKPDLKAEREA NAAERAERKL LRDKKRREEMERLEKERQA
Sbjct: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKLHLRDKKRREEMERLEKERQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMVAEKMTSNKQIASE+KSLQELE+DFM
Sbjct: 181 EMRSYKGLMVAEKMTSNKQIASENKSLQELEDDFM 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143008|ref|XP_002324816.1| predicted protein [Populus trichocarpa] gi|222866250|gb|EEF03381.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/216 (93%), Positives = 210/216 (97%), Gaps = 1/216 (0%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVY+RLHKGQTID
Sbjct: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEGVLEDC QLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHN KMVRTV+
Sbjct: 61  DISEGVLEDCVQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLK-AEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
           VEKR+NE+VNRLNKTKVERKPDLK AEREA NAAERAERKL LRDKKRREEMERLEKERQ
Sbjct: 121 VEKRLNEVVNRLNKTKVERKPDLKAAEREAVNAAERAERKLLLRDKKRREEMERLEKERQ 180

Query: 180 AEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
            E+RSYKGLMVAEKMTSNKQ+ASE+KSLQELE+DFM
Sbjct: 181 TEIRSYKGLMVAEKMTSNKQVASENKSLQELEDDFM 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430019|ref|XP_002284173.1| PREDICTED: coiled-coil domain-containing protein 25-like [Vitis vinifera]

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/215 (92%), Positives = 210/215 (97%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEA DYTIFMGLDK+ENEELIKYGFPEDIWFHVDKMSSAHVY+RLHKGQTID
Sbjct: 1   MVFYFKARPEAADYTIFMGLDKHENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEG+LEDCAQLVKANSIQGNKVNN+DVVYTPW NLKKTASMDVGQVGF+N KMVRTV+
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWHNLKKTASMDVGQVGFYNSKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLN+TKVERKPDLKAEREA NAAERAERKLQLRDKKRREEMERLEKERQA
Sbjct: 121 VEKRINEIVNRLNRTKVERKPDLKAEREAVNAAERAERKLQLRDKKRREEMERLEKERQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMV+EKMTSNKQIAS +KSLQELE+DFM
Sbjct: 181 EIRSYKGLMVSEKMTSNKQIASANKSLQELEDDFM 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806270|ref|NP_001241216.1| uncharacterized protein LOC100802228 [Glycine max] gi|255637408|gb|ACU19032.1| unknown [Glycine max]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/215 (91%), Positives = 208/215 (96%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEAGD+TIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVY+RLHKGQTID
Sbjct: 1   MVFYFKARPEAGDFTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           D+SEG+LEDCAQLVKANSIQGNKVNN+DVVYTPW+NLKKTASMDVGQVGFHN KMVRTV+
Sbjct: 61  DMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLNKTKVERKPDLKAEREA NAAERAERK QLR+KKRREE+ RLEKE+Q 
Sbjct: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKQQLREKKRREELGRLEKEKQT 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMVAE MTSNKQIAS SKSLQELEEDFM
Sbjct: 181 ELRSYKGLMVAENMTSNKQIASGSKSLQELEEDFM 215

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437028|ref|XP_004136294.1| PREDICTED: coiled-coil domain-containing protein 25-like [Cucumis sativus]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/215 (91%), Positives = 208/215 (96%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARP+ GDYTIFMGLDKYENEELIKYGF EDIWFHVDKMSSAHVY+RL KGQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKYENEELIKYGFIEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEG+LEDCAQLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTV+
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRIN+IVNRLN+TKVERKPDLKAEREA NAAERAERK  LRDKKRREEMERLEKERQA
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDKKRREEMERLEKERQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMV+EKMTSNKQIA+ SKSLQELE+DFM
Sbjct: 181 ELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523249|ref|XP_004168636.1| PREDICTED: coiled-coil domain-containing protein 25-like [Cucumis sativus]

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/215 (91%), Positives = 207/215 (96%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARP+ GDYTIFMGLDKYENEELIKYGF EDIWFHVDKMSSAHVY+RL KGQTID
Sbjct: 1   MVFYFKARPDVGDYTIFMGLDKYENEELIKYGFIEDIWFHVDKMSSAHVYVRLQKGQTID 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEG+LEDCAQLVKANSIQGNKVNNIDVVYTPW+NLKKTASMDVGQVGFHNPKMVRTV+
Sbjct: 61  DISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVR 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRIN+IVNRLN+TKVERKPDLKAEREA NAAERAERK  LRDKKRREEMERLEKERQ 
Sbjct: 121 VEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLRDKKRREEMERLEKERQV 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMV+EKMTSNKQIA+ SKSLQELE+DFM
Sbjct: 181 ELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242089965|ref|XP_002440815.1| hypothetical protein SORBIDRAFT_09g007310 [Sorghum bicolor] gi|241946100|gb|EES19245.1| hypothetical protein SORBIDRAFT_09g007310 [Sorghum bicolor]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/215 (90%), Positives = 208/215 (96%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFK RPEAGDYTIFMGLDKYENE+LIKYGFPEDIWFHVDKMSSAHVY+RL+KGQT+D
Sbjct: 1   MVFYFKVRPEAGDYTIFMGLDKYENEDLIKYGFPEDIWFHVDKMSSAHVYVRLNKGQTMD 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           D+SEG+LEDCAQLVKANSIQGNKVNNIDVVYTPW NLKKT SMDVGQVGFHNPK+VRT+K
Sbjct: 61  DMSEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWYNLKKTPSMDVGQVGFHNPKLVRTIK 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLNKTKVERKPDLKAEREA +AAE+AERK QLRDKKRREEMERLEKE+QA
Sbjct: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAVSAAEKAERKAQLRDKKRREEMERLEKEKQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           ++RSYKGLMV EKMTSNKQIAS SK+LQELEEDFM
Sbjct: 181 DIRSYKGLMVQEKMTSNKQIASGSKTLQELEEDFM 215

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495995|ref|NP_001150110.1| LOC100283739 [Zea mays] gi|194707814|gb|ACF87991.1| unknown [Zea mays] gi|195627538|gb|ACG35599.1| coiled-coil domain-containing protein 25 [Zea mays] gi|195636814|gb|ACG37875.1| coiled-coil domain-containing protein 25 [Zea mays] gi|413949437|gb|AFW82086.1| coiled-coil domain-containing protein 25 [Zea mays]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/215 (90%), Positives = 209/215 (97%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEAGDYTIFMGLDKYENE+LIKYGFPEDIWFHVDKMSSAHVY+RL+KGQ++D
Sbjct: 1   MVFYFKARPEAGDYTIFMGLDKYENEDLIKYGFPEDIWFHVDKMSSAHVYVRLNKGQSMD 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           D+SEG+LEDCAQLVKANSIQGNKVNNIDVVYTPW NLKKT SMDVGQVGFHNPK+VRT+K
Sbjct: 61  DMSEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWYNLKKTPSMDVGQVGFHNPKLVRTIK 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINEIVNRLNKTKVERKPDLKAEREA +AAE+AERK QLRDKKRREEMERLEKE+QA
Sbjct: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAISAAEKAERKAQLRDKKRREEMERLEKEKQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           ++RSYKGLMV EKMTSNKQIAS SK+LQELEEDFM
Sbjct: 181 DIRSYKGLMVQEKMTSNKQIASGSKTLQELEEDFM 215

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357134245|ref|XP_003568728.1| PREDICTED: coiled-coil domain-containing protein 25-like [Brachypodium distachyon]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/215 (89%), Positives = 208/215 (96%)

Query: 1   MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
           MVFYFKARPEAGDYTIFMGLDK+ENE+LIKYGFPEDIWFHVDKMSSAHVYLRL+KGQT+D
Sbjct: 1   MVFYFKARPEAGDYTIFMGLDKHENEDLIKYGFPEDIWFHVDKMSSAHVYLRLNKGQTMD 60

Query: 61  DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
           DISEGVLEDCAQLVKANSIQGNKVNN+DVVYTPW NLKKT SMDVGQVGFHN K+VRTV+
Sbjct: 61  DISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWYNLKKTPSMDVGQVGFHNSKLVRTVQ 120

Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQA 180
           VEKRINE+VNRLNKTKVER PDLKAEREA +AAE+AERKLQLRDKKRREEMERLEKE+QA
Sbjct: 121 VEKRINEVVNRLNKTKVERTPDLKAEREAVSAAEKAERKLQLRDKKRREEMERLEKEKQA 180

Query: 181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
           E+RSYKGLMV +KMTSNKQ+AS SK+LQELEEDFM
Sbjct: 181 EIRSYKGLMVQDKMTSNKQVASGSKTLQELEEDFM 215

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
TAIR|locus:2144286	215	AT5G11500 "AT5G11500" [Arabido	1.0	1.0	0.748	2.7e-84
MGI|MGI:1914429	208	Ccdc25 "coiled-coil domain con	0.920	0.951	0.567	2.3e-55
ZFIN|ZDB-GENE-040426-1389	207	ccdc25 "coiled-coil domain con	0.920	0.956	0.555	1.6e-54
FB|FBgn0029929	209	CG4593 [Drosophila melanogaste	0.948	0.976	0.521	1.7e-50
DICTYBASE|DDB_G0269786	206	ccdc25 "coiled-coil domain-con	0.953	0.995	0.425	1.5e-42
ASPGD|ASPL0000011843	220	AN3771 [Emericella nidulans (t	0.669	0.654	0.569	3.6e-41
CGD|CAL0001251	227	orf19.1083 [Candida albicans (	0.6	0.568	0.514	4.7e-32
UNIPROTKB|Q59QX6	227	CaO19.1083 "Conserved coiled c	0.6	0.568	0.514	4.7e-32
SGD|S000004739	208	JLP2 "Protein of unknown funct	0.641	0.663	0.454	9.1e-29
WB|WBGene00023423	140	F43C1.7 [Caenorhabditis elegan	0.632	0.971	0.467	1e-27

TAIR|locus:2144286 AT5G11500 "AT5G11500" [Arabidopsis thaliana (taxid:3702)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 161/215 (74%), Positives = 177/215 (82%)

Query:     1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
             MVFYFKARP+AGDYTIFMGLDK+ENEELIKYGFPED+WFHVDKMSSAHVYLRLH+GQ+ D
Sbjct:     1 MVFYFKARPDAGDYTIFMGLDKFENEELIKYGFPEDVWFHVDKMSSAHVYLRLHRGQSFD 60

Query:    61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
             DISEGVLEDCAQLVKANSIQGNKVNN+DVVYTPW+NLKKTASMDVGQVGFHN KMVRT++
Sbjct:    61 DISEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTIR 120

Query:   121 VEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXKLQLXXXXXXXXXXXXXXXXQA 180
             VEKR+NEIVNRLNKTKVER PDL+              K  L                Q+
Sbjct:   121 VEKRVNEIVNRLNKTKVERTPDLRAEREAVNAAERAERKQHLREKKKREEIDRLEKERQS 180

Query:   181 EVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
             E+RSYKGLMV +KMTSNK IAS +KSLQELE+DFM
Sbjct:   181 EMRSYKGLMVTDKMTSNKDIASSNKSLQELEDDFM 215

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

MGI|MGI:1914429 Ccdc25 "coiled-coil domain containing 25" [Mus musculus (taxid:10090)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 113/199 (56%), Positives = 137/199 (68%)

Query:     1 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
             MVFYF +    +  YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL KG+ I
Sbjct:     1 MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKI 60

Query:    60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
             +DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V
Sbjct:    61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120

Query:   120 KVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXKLQLXXXXXXXXXXXXXXXXQ 179
              VEK++NEI+NRL KTK+E+ PDL               K Q+                 
Sbjct:   121 TVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQEMKRKEKEEMKKKREM 180

Query:   180 AEVRSYKGLMVAEKMTSNK 198
              E+RSY  LM  E M+SN+
Sbjct:   181 DELRSYSSLMKVENMSSNQ 199

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040426-1389 ccdc25 "coiled-coil domain containing 25" [Danio rerio (taxid:7955)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 110/198 (55%), Positives = 136/198 (68%)

Query:     1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
             MVFYF +   +  +TI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLR+ KG TID
Sbjct:     1 MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTID 60

Query:    61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
             DI + VL DC QLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH  K V+ V 
Sbjct:    61 DIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVA 120

Query:   121 VEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXKLQLXXXXXXXXXXXXXXXXQA 180
             VEK+INEIVNRL KTK ER PDL               K Q+                  
Sbjct:   121 VEKKINEIVNRLEKTKEERYPDLAAEKESRDREERNEKKAQIQEQKKKEKEEVKKKKEME 180

Query:   181 EVRSYKGLMVAEKMTSNK 198
             ++++Y  LM ++ MT+N+
Sbjct:   181 DLKNYTSLMKSDNMTTNE 198

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0029929 CG4593 [Drosophila melanogaster (taxid:7227)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 107/205 (52%), Positives = 130/205 (63%)

Query:     1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
             MVFYFK         ++MG DK+ENEELI++G+PED+WFHV  +SSAHVYLRL KGQTID
Sbjct:     1 MVFYFKGNVVQPPAMLYMGRDKHENEELIRWGWPEDVWFHVHDLSSAHVYLRLRKGQTID 60

Query:    61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
             DI   VL D AQL KANSIQGNKVNN++VVYT W NLKKT  M+ GQV +HN K VR ++
Sbjct:    61 DIPTDVLVDAAQLCKANSIQGNKVNNLEVVYTMWENLKKTPDMEPGQVAYHNEKAVRRIR 120

Query:   121 VEKRINEIVNRLNKTKVERK-PDLKXXXXXXXXXXXXXXKLQLXXXXXXXXXXXXXXXXQ 179
             +EKRINEIVNRLN+TK E + PD +              K                   +
Sbjct:   121 LEKRINEIVNRLNRTKTEEEHPDFRGLREARDAAERQDQKKIQRERREQEKEAAKQRELE 180

Query:   180 AEVRSYKGLMVAEKMTSNKQIASES 204
             AE+RSY  L  +E M +N    +ES
Sbjct:   181 AELRSYASLQKSENMRTNYDAGNES 205

GO:0022008 "neurogenesis" evidence=IMP

DICTYBASE|DDB_G0269786 ccdc25 "coiled-coil domain-containing protein 25" [Dictyostelium discoideum (taxid:44689)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 92/216 (42%), Positives = 131/216 (60%)

Query:     1 MVFYFKA-RPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
             MV YFK   PE   Y  +MG+DK+ENE+LIKYG+PED+WFHV+ +SSAHVYLRL KG+T 
Sbjct:     1 MVLYFKLIDPE---YICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETW 57

Query:    60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
             +DI   +LE+C QLVK NSIQG K  ++D+VYTPWANLKKTA M+ GQV +HN + V+ V
Sbjct:    58 NDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYV 117

Query:   120 KVEKRINEIVNRLNKTKVERKPDLKXXXXXXXXXXXXXXKLQLXXXXXXXXXXXXXXXXQ 179
             +  ++ ++I+NR+ KT+ +R+ DL               + +                  
Sbjct:   118 RNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEKRRAEKKAYEEKQKM 177

Query:   180 AEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM 215
              +++ Y  +M  + M  NK   ++       E+DFM
Sbjct:   178 EDIKKYTSIMKTDNMKFNKYNPTD-------EDDFM 206

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000011843 AN3771 [Emericella nidulans (taxid:162425)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 86/151 (56%), Positives = 109/151 (72%)

Query:     1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIW-------FHVDKMSSAHVYLRL 53
             MV+YF +        I+MG DK+ENE+LIKYG  +D+W       FHVD +SSAHVY+RL
Sbjct:     1 MVYYFTSNVVQPSAYIYMGKDKFENEDLIKYGLEKDVWYGFPKSAFHVDNLSSAHVYVRL 60

Query:    54 HKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNP 113
               G++ D+I + +L DCAQL KANSI+GNK +NI V+YTPW+NL K  SM  GQV FHN 
Sbjct:    61 RDGESWDNIPQELLVDCAQLTKANSIEGNKKDNITVIYTPWSNLMKDGSMATGQVSFHNH 120

Query:   114 KMVRTVKVEKRINEIVNRLNKTKVERKPDLK 144
             K+V+ V V +R N IVNRLNKTKVE+ PDL+
Sbjct:   121 KLVKKVFVAQRENAIVNRLNKTKVEKYPDLR 151

GO:0008150 "biological_process" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

CGD|CAL0001251 orf19.1083 [Candida albicans (taxid:5476)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 70/136 (51%), Positives = 93/136 (68%)

Query:    10 EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID-------DI 62
             +A + TI+MG DK EN+ LIK+  P++IWFHVDK+SSAH+YL+L K Q  +        I
Sbjct:    25 QADEATIYMGRDKVENDPLIKHSHPKNIWFHVDKLSSAHIYLQLTKDQIKNFKSFESFQI 84

Query:    63 SEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVE 122
              EG+L    QL KANSI+GNK+NN+ ++YTP  NL    SMD+G V F N K+V+   V 
Sbjct:    85 DEGLLNQLGQLTKANSIKGNKLNNVSIIYTPVENLHTDGSMDIGTVTFKNNKLVKRFNVV 144

Query:   123 KRINEIVNRLNKTKVE 138
             K+ N I+N+LNKTK E
Sbjct:   145 KKENAIINKLNKTKKE 160

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59QX6 CaO19.1083 "Conserved coiled coil protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 70/136 (51%), Positives = 93/136 (68%)

Query:    10 EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID-------DI 62
             +A + TI+MG DK EN+ LIK+  P++IWFHVDK+SSAH+YL+L K Q  +        I
Sbjct:    25 QADEATIYMGRDKVENDPLIKHSHPKNIWFHVDKLSSAHIYLQLTKDQIKNFKSFESFQI 84

Query:    63 SEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVE 122
              EG+L    QL KANSI+GNK+NN+ ++YTP  NL    SMD+G V F N K+V+   V 
Sbjct:    85 DEGLLNQLGQLTKANSIKGNKLNNVSIIYTPVENLHTDGSMDIGTVTFKNNKLVKRFNVV 144

Query:   123 KRINEIVNRLNKTKVE 138
             K+ N I+N+LNKTK E
Sbjct:   145 KKENAIINKLNKTKKE 160

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000004739 JLP2 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 65/143 (45%), Positives = 95/143 (66%)

Query:     1 MVFYFKARPE--AGDYTIFMGLDKYENEELIKYGFPE--DIWFHVDKMSSAHVYLRLHKG 56
             MV++++++P   +  Y I MG DK+EN+ LIK+ + E   +WFH DK SS HVYL+L   
Sbjct:     1 MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPN 60

Query:    57 Q-TIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKM 115
             + TIDDI + V+ DC QL K+ SIQGNK+    ++ TPW NL+K   M+ G+V F + + 
Sbjct:    61 EKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQ 120

Query:   116 VRTVKVEKRINEIVNRLNKTKVE 138
              R ++   R N+I+NRL KT+VE
Sbjct:   121 CRKMECGARDNKILNRLAKTRVE 143

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA;IDA

WB|WBGene00023423 F43C1.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 64/137 (46%), Positives = 89/137 (64%)

Query:     1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
             MVF F +        IFMG  + ENE+L K G P D+WFHVDK+SSAHVYL+L  G TID
Sbjct:     1 MVFGFISSTVTPPALIFMGEHQVENEKLFKCGDPGDVWFHVDKVSSAHVYLQLPSGITID 60

Query:    61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
              I E +LE+C QLVK NSIQG K+  ++V YT   NLKK   M  G++GF++  ++++  
Sbjct:    61 TIPEELLEECCQLVKKNSIQGVKMEKVEVNYTLKENLKKVKGMQTGEIGFYDKNIIKSRS 120

Query:   121 V-EKRINEIVNRLNKTK 136
             V +K   +++ +L  T+
Sbjct:   121 VLKKNTKKVLQQLEGTQ 137


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      215       185   0.00080  110 3  11 22  0.46    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.57u 0.13s 16.70t   Elapsed:  00:00:01
  Total cpu time:  16.57u 0.13s 16.70t   Elapsed:  00:00:01
  Start:  Thu May  9 21:39:31 2013   End:  Thu May  9 21:39:32 2013

GO:0040010 "positive regulation of growth rate" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q55D55	CCD25_DICDI	No assigned EC number	0.4722	0.9534	0.9951	yes	no
Q3SZX8	CCD25_BOVIN	No assigned EC number	0.6381	0.9209	0.9519	yes	no
Q7T312	CCD25_DANRE	No assigned EC number	0.6091	0.9162	0.9516	yes	no
Q78PG9	CCD25_MOUSE	No assigned EC number	0.6231	0.9209	0.9519	yes	no
Q86WR0	CCD25_HUMAN	No assigned EC number	0.6331	0.9209	0.9519	yes	no
Q6GLE1	CCD25_XENTR	No assigned EC number	0.6414	0.9162	0.9563	yes	no
Q5R9S1	CCD25_PONAB	No assigned EC number	0.6381	0.9209	0.9519	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	215
pfam05670	90	pfam05670, DUF814, Domain of unknown function (DUF	7e-29
COG1293	564	COG1293, COG1293, Predicted RNA-binding protein ho	0.001

>gnl|CDD|218683 pfam05670, DUF814, Domain of unknown function (DUF814)

 Score =  103 bits (258), Expect = 7e-29
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 12 GDYTIFMGLDKYENEEL-IKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDC 70
          G + I  G +  +NEEL  KY  P D+WFH D +  +HV ++    +  +D     +++ 
Sbjct: 6  GGFLIIGGRNAKQNEELVKKYAEPNDLWFHADDIPGSHVVIKTQGNEVPED----TIQEA 61

Query: 71 AQLVKANSIQGNKVNNIDVVYTPWANLKK 99
          AQL  + S      NN+ V YT    LKK
Sbjct: 62 AQLAASYSKAWKAGNNVPVDYTSGKYLKK 90

This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from B. subtilis yloA, where the N-terminal region is involved in this activity. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important. Length = 90

>gnl|CDD|224212 COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 14  YTIFMGLDKYENEELI-KYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQ 72
           + +  G +  +NEEL+ KY   +D+WFH D +  +HV ++        + SE  + + AQ
Sbjct: 450 FLVIGGRNAKQNEELVKKYAEKDDLWFHADDIPGSHVVIKTEG----KEPSEETILEAAQ 505

Query: 73  LVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRI 125
           L  + S +  K   + V YT    ++       G+V +   K +R  +    I
Sbjct: 506 LAASYS-KAWKSGLVPVDYTWVKPVQVPKGAKSGEVLYKGQKTIRGKRDYITI 557

Length = 564

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	215
KOG3272	207	consensus Predicted coiled-coil protein [General f	100.0
PF05670	90	DUF814: Domain of unknown function (DUF814); Inter	99.96
COG1293	564	Predicted RNA-binding protein homologous to eukary	99.92
KOG2030	911	consensus Predicted RNA-binding protein [General f	99.51

>KOG3272 consensus Predicted coiled-coil protein [General function prediction only]

Probab=100.00  E-value=2.1e-63  Score=419.85  Aligned_cols=206  Identities=67%  Similarity=1.019  Sum_probs=199.8

Q ss_pred             CEEEEEecccCCCeEEEEeCChhhhHHHHHhcCCCcEEEEecCCCCcEEEEEeCCCCCCCCCCHHHHHHHHHHHHHhccc
Q 027998            1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQ   80 (215)
Q Consensus         1 Mv~~f~s~~~~~g~~I~vGRn~~ENe~L~k~a~~~DlWFHv~~~pGaHViLR~~~g~~~~~ipe~~L~~AAqLaa~~S~k   80 (215)
                      |||||.|..+.++++||+|+++++|++||+|+||+|+|||+++++|||||||+.+|+++++||.++|.+||||++++||+
T Consensus         1 mv~~~~s~~t~~~~~i~mg~dk~en~~lIk~g~~e~Vwfhv~~~sS~hvyl~l~~~qtiddip~~vL~DC~QLvKaNSIQ   80 (207)
T KOG3272|consen    1 MVFYFKSNPTEPPYMIYMGKDKFENEELIKWGWPEDVWFHVDKLSSAHVYLRLREGQTIDDIPEFVLEDCAQLVKANSIQ   80 (207)
T ss_pred             CceEeccccCCCCeeEEEeecccchhHHHHcCCccceEEEeecccccceeeeecCCCCcccccHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCceEEEEEeccceecCCCCCcceEEEcCceEEEEEecccccHHHHHHhhccceeeC-cchHHHHHHHHHHHHHHHH
Q 027998           81 GNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERK-PDLKAEREAANAAERAERK  159 (215)
Q Consensus        81 g~k~~~V~V~YT~~knvkK~~~~~~G~V~f~~~k~v~~v~v~~~~~~ivnrl~ktk~e~~-~d~~~~~~~~~~~~~~~~k  159 (215)
                      |+|+++|+|+||||+||+|+++|.||||+||+.+.|+++.+++|.|+|||||+||++|.+ |||+++||.+++++|.+.+
T Consensus        81 G~Kmnnv~VvYT~w~NLKKt~~M~~Gqv~fh~~k~vr~~~~~~r~Nei~NrL~kTkve~~~~d~~~lrEard~~er~e~k  160 (207)
T KOG3272|consen   81 GNKMNNVEVVYTPWSNLKKTADMDVGQVGFHSTKQVRRIVVEKRINEIVNRLAKTKVERFKPDFAALREARDAKERQEIK  160 (207)
T ss_pred             cccccceeEEechhHhhcccCCCCcccccchhhhheeeeeecchHHHHHHHHhhhhHhhcchhHHHHHHHHhhhhhhhHH
Confidence            999999999999999999999999999999999999999999999999999999999988 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccccchhhcccccccccccCCCC
Q 027998          160 LQLRDKKRREEMERLEKERQAEVRSYKGLMVAEKMTSNKQIASESKSLQELEEDFM  215 (215)
Q Consensus       160 ~~~~~~~~~e~~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~ddfm  215 (215)
                      +..+|++.+|+++..++.++++++||.++|+.| |+++.+.       ++ +||||
T Consensus       161 ~~~~Er~~rekee~l~k~~k~e~rsy~~~~k~e-~~~d~d~-------~~-sddfm  207 (207)
T KOG3272|consen  161 KIEQERSKREKEEMLWKEEKAELRSYISLMKDE-MRDDMDL-------GN-SDDFM  207 (207)
T ss_pred             HHHHhhhhHHHHHHHhHHHHHHhhhhhccchhh-hhcccCc-------cc-ccccC
Confidence            999999999999999999999999999999999 7777652       23 89999

>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity

Probab=99.96  E-value=6.5e-30  Score=193.21  Aligned_cols=89  Identities=36%  Similarity=0.578  Sum_probs=80.1

Q ss_pred             EEEecccCCCeEEEEeCChhhhHHH-HHhcCCCcEEEEecCCCCcEEEEEeCCCCCCCCCCHHHHHHHHHHHHHhccccc
Q 027998            4 YFKARPEAGDYTIFMGLDKYENEEL-IKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGN   82 (215)
Q Consensus         4 ~f~s~~~~~g~~I~vGRn~~ENe~L-~k~a~~~DlWFHv~~~pGaHViLR~~~g~~~~~ipe~~L~~AAqLaa~~S~kg~   82 (215)
                      ||+|   ++|++|+||||+.|||.| ++++.++|||||++++||||||||++++    +.++++|++||+||++||+.++
T Consensus         1 wF~s---~~g~~i~vGrn~~eNe~L~~k~~~~~D~wfH~~~~pg~hvil~~~~~----~~~~~~l~~AA~laa~~Ska~~   73 (90)
T PF05670_consen    1 WFIS---SDGFKIIVGRNAKENEMLTKKYARPNDLWFHADDFPGPHVILRNNPG----DEPPPTLQEAAQLAASYSKAWK   73 (90)
T ss_pred             CEEe---cCCeEEEEeCCHHHHHHHHHHhhhhcceeEeccCCCCCEEEEECCCC----ccchHHHHHHHHHHHHhCHhhc
Confidence            4555   489999999999999999 8999999999999999999999999865    3445599999999999995478


Q ss_pred             CCCceEEEEEeccceec
Q 027998           83 KVNNIDVVYTPWANLKK   99 (215)
Q Consensus        83 k~~~V~V~YT~~knvkK   99 (215)
                      +...|.|+||+++||+|
T Consensus        74 ~~~~v~V~yt~~k~v~K   90 (90)
T PF05670_consen   74 KGEKVEVDYTQGKYVKK   90 (90)
T ss_pred             cCCCeEEEEeehHhccC
Confidence            89999999999999997

This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.

>COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]

Probab=99.92  E-value=6.4e-25  Score=212.29  Aligned_cols=106  Identities=27%  Similarity=0.447  Sum_probs=99.3

Q ss_pred             CCCeEEEEeCChhhhHHH-HHhcCCCcEEEEecCCCCcEEEEEeCCCCCCCCCCHHHHHHHHHHHHHhcccccCCCceEE
Q 027998           11 AGDYTIFMGLDKYENEEL-IKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDV   89 (215)
Q Consensus        11 ~~g~~I~vGRn~~ENe~L-~k~a~~~DlWFHv~~~pGaHViLR~~~g~~~~~ipe~~L~~AAqLaa~~S~kg~k~~~V~V   89 (215)
                      ++|+.|++|||+.|||.| .+++.++|+|||++++|||||+|+++ |.   ++|+++|.+||+||++|| +|++++.|.|
T Consensus       447 s~Gf~vi~Grna~qNe~l~~k~~~~~DlwfHa~~~~gshvvik~~-~~---~~~e~ti~eAA~~Aa~~S-ka~~~~~v~v  521 (564)
T COG1293         447 SDGFLVIGGRNAKQNEELVKKYAEKDDLWFHADDIPGSHVVIKTE-GK---EPSEETILEAAQLAASYS-KAWKSGLVPV  521 (564)
T ss_pred             cCCeEEEEecCcccchHHHHhhcccCcEEEEccCCCCCeEEEeCC-CC---CCChHHHHHHHHHHHHhc-hHhhcCCCce
Confidence            579999999999999999 79999999999999999999999986 32   799999999999999999 5999999999


Q ss_pred             EEEeccceecCCCCCcceEEEcCceEEEEEec
Q 027998           90 VYTPWANLKKTASMDVGQVGFHNPKMVRTVKV  121 (215)
Q Consensus        90 ~YT~~knvkK~~~~~~G~V~f~~~k~v~~v~v  121 (215)
                      +||.++++++++++++|+|+|.+.++|+.-+.
T Consensus       522 d~t~vk~vqv~K~a~~G~vl~~g~~~I~~k~~  553 (564)
T COG1293         522 DYTWVKPVQVPKGAKSGEVLYKGQKTIRGKRD  553 (564)
T ss_pred             EEEEEcccccCCCCCCceEEecCcEEEEEccc
Confidence            99999999999999999999999999876544

>KOG2030 consensus Predicted RNA-binding protein [General function prediction only]

Probab=99.51  E-value=3.4e-14  Score=140.63  Aligned_cols=94  Identities=23%  Similarity=0.325  Sum_probs=82.1

Q ss_pred             EEEEecccCCCeEEEEeCChhhhHHH-HHhcCCCcEEEEecCCCCcEEEEEeCCCCCCCCCCHHHHHHHHHHHHHhcccc
Q 027998            3 FYFKARPEAGDYTIFMGLDKYENEEL-IKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQG   81 (215)
Q Consensus         3 ~~f~s~~~~~g~~I~vGRn~~ENe~L-~k~a~~~DlWFHv~~~pGaHViLR~~~g~~~~~ipe~~L~~AAqLaa~~S~kg   81 (215)
                      .||.|   |+||+|++|||+.|||.| -+|..|+||+||++-..+|||||++++++   ++|+.+|.+|+.+|.+|| ++
T Consensus       497 ~wFiS---SEg~LVi~GrdaqQnEllvkky~~~~DiY~had~~gaSsviIkN~~~~---eipp~TL~eAg~ma~~~S-~a  569 (911)
T KOG2030|consen  497 HWFIS---SEGYLVIGGRDAQQNELLVKKYLEPGDIYVHADLHGASSVIIKNPPKT---EIPPKTLEEAGSMALCYS-KA  569 (911)
T ss_pred             eEEEe---cCcEEEEcCCChhhhhHHHHhhCCCCCeEEecccCCCceEEEeCCCCC---CCChhhHHHHHHHHhHHh-hh
Confidence            35666   699999999999999999 59999999999999999999999998774   899999999999999999 58


Q ss_pred             cCCCce-EEEEEeccceecCCCC
Q 027998           82 NKVNNI-DVVYTPWANLKKTASM  103 (215)
Q Consensus        82 ~k~~~V-~V~YT~~knvkK~~~~  103 (215)
                      |...-| ..-|+...+|+|+.+.
T Consensus       570 WdakvvssaWwv~~dqVSKtapt  592 (911)
T KOG2030|consen  570 WDAKVVSSAWWVYPDQVSKTAPT  592 (911)
T ss_pred             hcccccccceEEecccccccCCC
Confidence            865433 3448889999998874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	215
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	6e-04

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKKRREEMERLEKERQ 179
           ++     E+  RL   K E +  L          E   ++LQ   KK +++M  LE++ +
Sbjct: 906 ELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLE 965

Query: 180 AEVRSYKGLMVAEKMTSNKQIASESKSLQELEED 213
            E  + +  +  EK+T++ +I      +  +E+ 
Sbjct: 966 EEEAA-RQKLQLEKVTADGKIKKMEDDILIMEDQ 998

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00